>input_sequence_69223
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--------ATGCTCACAGCCCATCTGCCCATCGCTCTCATTAACTTCCCCAT---CTCCCTCCAACATCTCTTTTGCTCT
CCCATATCCTCCTCCGTCCTCGTCTCCGGCGACATGTCCGCTTCATCTTCATCATCTCTCCTCGTCCCGGCGGACTGGCT
GCTACCCCTGATGGCATGTCCACTCTGCGGCCACGAGTTAGTGACAGCCGTCGCAAGGAGTGGGAACAACGTTGGGCATC
GATTCTACAAGTGCATTCGCTACGATGTAAGTACTTTTTGATCCGATC-TTGCGAGATTTTCCTTATTGAATCAACTTTT
CGCACACATTTCGACCCTTTTCACGTTCTCATGCGAACTTGTCGTCCCTTCCATGTTCTTTCAGTCAAGGCAGTGCCGTT
TCTTCGAGTTCCAGCGTGCGTACTGCATGAGGATGACTCATGAGCAGATCCTGGCTGTGCAGCACCAGGCCGGATGGCAC
CCACCCGGGTTTGGATTTGCGCCCCAGCAGGGCAATGGTCCTTCTCAGATGGTTCCTGCTGCCATCCAGCCCCAGATCCA
GGCGCAATTGCAGCC------------------------------------------GCAGATGCAGCCGCAGACGCAGC
CTCAGATCCAGGCTCCGATGCAGCAGCTTCCCCCGGCGGGCAACAATATGATAGCTGAC---------------GCTGGA
AGGCCTGCTGCCGGAGTCGGAGCAGCTTATGGAGCACAAGGCCTAGCTGCAGTTGTCGTTCTTATGGCTGCAGTGAACAT
CATGCTAACTGTTCTGCTGTTGATGGTTGTGTTAGCTAAGTAA-------------------------------------
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>chr3D_1_TraesCS3D01G454400
TTTTCCACTCTTACTCATTCCTTTTAGTTATCTCTGTCTTTCATCCCTTAGTCTTCAGTTATCATTCCTGCTGTAGATTT
AATTATTCTTCAGTTCCATCCATGTTCATTATCTTGATATTGATCATTCTTTTGCTGTTAGATAACTAATATTTAGTGCA
ACCCCTTCACC-----------------------------AAGTAAAAACTGGCATGATCAGATTTGTCTATGACCTTAG
TTTGTCCTCAGTCATCTTCATTGCAACTTTTGTATTTGTTAAACATTTGATTTCGC-ATCAGTT--TTGTC-TATGACCT
TAGTTTTGTCATCTTCATCATTCTATCTACACAACTTGCTCATTTTTATTTCTTCATTCTTTTTGGTTAGTTTCGAAAGT
GATATTAGCTACCAAGTTGTCATCATGTGGATGCCCTTTTAAGGTAGCCTCCAGCTTGCGGACCACCCCGACGGTAGGCA
TGGCAGGAATATGCCTTGGGGGATGGATTGTAAGCACTGCCGCGTACAAGACAGTAGCAGATGGTCGTATCGCTTTTCAA
CAAGGATTTCTGGGAGGAATTCCTGGAGGAGAACTACCTAGCATTGACAGAGCGTTGCTAATCACCATCAGGAACAGTGC
ACTAGACGAACTGAAC--------------ATGATGGTTGTCTTCAACGAGATCTAATTATGAGATTGTCAGGAATAAGC
GAAAATCTGCTTCTGTGCTCGGGCTCAGCTGATCCCGCAATCCACACCGATCGGTTTGCATTAGGATTTGTGCGTCTGTC
GGTATTTTCTGTCGTATGTCTCTTTCTCTGGAGTGGAGCACCGTAAGCATTTATTGCGACAGAGCGTTTCGCTGCCGTTG
CGGGACAGAGAGAGGCTCGAGGGCTCGTTTTCTTATCTGTGCTAACGTCGTCCTGGG-ACAGCTATACCATTGATGGCTC
GCCACTTTATCTGAGCCACCATGAGCCGTATGGGCTAACTTCTCCTATCGACGGCGTCAACACGACTGCAAACATAAAAT
GCATTCCCATGCTCACAGCCCATCTGCCCATCGCTCTCATTAACTTCCCCAT---CTCCCTCCAACATCTCTTTTGCTCT
CCCATATCCTCCTCCGTCCTCGTCTCCGGCGACATGTCCGCTTCATCTTCATCATCTCTCCTCGTCCCGGCGGACTGGCT
GCTACCCCTGATGGCATGTCCACTCTGCGGCCACGAGTTAGTGACAGCCGTCGCAAGGAGTGGGAACAACGTTGGGCATC
GATTCTACAAGTGCATTCGCTACGATGTAAGTACTTTTTGATCCGATC-TTGCGAGATTTTCCTTATTGAATCAACTTTT
CGCACACATTTCGACCCTTTTCACGTTCTCATGCGAACTTGTCGTCCCTTCCATGTTCTTTCAGTCAAGGCAGTGCCGTT
TCTTCGAGTTCCAGCGTGCGTACTGCATGAGGATGACTCATGAGCAGATCCTGGCTGTGCAGCACCAGGCCGGATGGCAC
CCACCCGGGTTTGGATTTGCGCCCCAGCAGGGCAATGGTCCTTCTCAGATGGTTCCTGCTGCCATCCAGCCCCAGATCCA
GGCGCAATTGCAGCC------------------------------------------GCAGATGCAGCCGCAGACGCAGC
CTCAGATCCAGGCTCCGATGCAGCAGCTTCCCCCGGCGGGCAACAATATGATAGCTGAC---------------GCTGGA
AGGCCTGCTGCCGGAGTCGGAGCAGCTTATGGAGCACAAGGCCTAGCTGCAGTTGTCGTTCTTATGGCTGCAGTGAACAT
CATGCTAACTGTTCTGCTGTTGATGGTTGTGTTAGCTAAGTAATTTCCATAGGTATTCTAGGGCACTCCTTTATTAATA-
----------GC-----------ACTATGCAAGTTCTAACTATTTTAGTGTAACCAAGGGTGGCTCCCTTTACCGCTAAG
CCTAT-----------------------------TTAAGACGACGACCCAGGTTTAGAGCTGTTGTGCTATTCGACAACC
AACTATGTAATGCTTTATCAGACCTTACTTAAGCTCCC-GTTTT-TTATTATTTTGCTGGGTTCAGATTGTATGAATTTT
TACATCTCCCCCTATGCAACGGGGTTAGTTGAGCTAACACTCTCAGAAACACATCATGTGTGCGAATCAACAGCTCAACG
AAGCTGCCATGTTTTCTCATCACAAACCATTAATCTCTAGCGTGCACGCCCATCCA-ACCCAGTATAAATGCTGAACCAT
GTT-TGACATATCAACGTCTAGGAGAGGTTCACCGTTTCGTTATGCC-ACACGTCCTAGTACACGCGTCTCCCCTCGCCG
CACCGTTTCCTTTA-TTTTTTTGGATTCGCGAGGGCAGAACCGTCATTTCTATTCAGCACGCATTATATCCCTATCCCAC
GGTTCCACCCACACCATCACTCATATCCTGCCCATTTCTTCCCCACCCGCCGCCGGAGAGCAGTACCAGCTATTCTACGG
GTCGATCCCGGCGCAAATTCAGCTCTTGCATGATTCAGGCCCCTCATCGGTCATACCACCATGGTAAGCCGCAGATTTTA
CCTTTTTTT-TTCTACAGCTCT---TTTGTATCTAGTTTGATAGATTGTA---TGCCTGGATCTGAATCTTGTCCGGGTC
T---------------TCCCTTTTTTTC-TTGCTC-GCAGGATGATAGTAGTTCGCAGTCTGGCAGCTGCGGAGCAGCGG
ACGCTCGTTATGTTAAGGACGTCGCTCACGCAGCTGCGCCTTGCCCTCTTGTTCACCCAGAGGGCTCATCTTCAAGTGCT
AAGTCGGCAGATCCACCTGCACCAACATCACGCATCTCCATCAAGCATGCAGCTTGTGTCATTCAGAAGTTTGACGACTA
CAAG
>chr3D_1
TTTTCCCCTCTTACTCATTCCTTTTAGTTATCTCTGTCTTTCATCCCTTAGTCTTCAGTTATCATTCCCGCTGTAGATTT
AATTATTCTTCAGTTCCATCCATGTTCATTATCTTGATATTGATCATTCTTTTGCTGTTAGATAACTAATATTTAGTGCA
ACCCCTTCACC-----------------------------AAGTAAAAACTGGCATGATCAGATTTGTCTATGACCTTAG
TTTGTCCTCAGTCATCTTCATTGCAACTTTTGTATTTGTTAAACATTTGATTTCGC-ATCAGTT--TTGTC-TATGACCT
TAGTTTTGTCATCTTCATCATTCTATCTACACAACTTGCTCATTTTTATTTCTTCATTCTTTTTGGTTAGTTTCGAAAGT
GATATTAGCTACCAAGTTGTCATCATGTGGATGCCCTTTTAAGGTAGCCTCCAGCTTGCGGACCACCCCGACGGTAGGCA
TGGCAGGAATATGCCTTGGGGGATGGATTGTAAGCACTGCCGCGTACAAGACAGTAGCAGATGGTCGTATCGCTTTTCAA
CAAGGATTTCTGGGAGGAATTCCTGGAGGAGAACTACCTAGCATTGACAGAGCGTTGCTAATCACCATCAGGAACAGTGC
ACTAGACGAACTGAAC--------------ATGATGGTTGTCTTCAACGAGATCTAATTATGAGATTGCCAGGAATAAG-
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----
>chr3A_1
TTTTCCACTCTTACTCGTTCCTTTTAGTTAACTTTGTCTTTCATCCCTTAGTCTTCAGTTATCGTTCTCGCTGTATATTT
AATTATTCTTCAGTTCCATCCATGTTCATTATCTTGATATGGATCATTCTTTTGCTGTTAGATAACTAATCTTTAGTGCA
AACCCTTCAGTCCC-TTTTTAGTCATTGTTTGTCTTGGTAAAGTAAAAAATGGCATGATCAGATTTGTCTATGAACTTAG
TTTGTCCTCAGTCATCTTCATTGTAACTTTTGTTTTTGTTAAAGATTTGATTTGGC-ATCATTTTTTTGTC-TATGACCT
CAGTTTTGTTATCTTCATCATTCTATCTACACAACTTGCTCATTTTTATTTCATCCTGCTTTTTGGTTAGTTTCAAAAGT
GATATTAGCTGCCAAGTTGTCATCATGTAGATGCCCTTTTAAGGTAGCCTCCAACTTGAGGACCACCCCGACGGCAAGCA
TGGCTGGACTATGCCTTGGAGGAGGGATTGTAAGCACTGCCGCATACAAGTCAGTAGGAGATGGTCGTATCACTTTTCAA
CAAGGATGGCCGAGAGGAATTCCCGGAGGAGAACTACCAAGCATTGAGAGAGTGGTGCTAATCACCATCAGGAACAGTGC
ACTGGACGAACTGAA-------TACGATGGACGATGGTTGTCTTCAACGAGGTCTAATTATGAGATTGTCAGGAATAAG-
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----
>chr3A_1
TTTTCCACTCTTACTCGTTCCTTTTAGTTAACTTTGTCTTTCATCCCTTAGTCTTCAGTTATCGTTCTCGCTGTATATTT
AATTATTCTTCAGTTCCATCCATGTTCATTATCTTGATATGGATCATTCTTTTGCTGTTAGATAACTAATCTTTAGTGCA
AACCCTTCAGTCCC-TTTTTAGTCATTGTTTGTCTTGGTAAAGTAAAAAGTGGCATGATCAGATTTGTCTATGAACTTAG
TTTGTCCTCAGTCATCTTCATTGTAACTTTTGGTTTTGTTAAAGATTTGATTTGGC-ATCATTTTTTTGTC-TATGACCT
CAGTTTTGTTATCTTCATCATTCTATCTACACAACTTGCTCATTTTTATTTCATCCTGCTTTTTGGT-AGTTTCAAAAGT
GATATTAGCTGCCAAGTTGTCATCATGTAGATGCCCTTTTAAGGTAGCCTCCAACTTGAGGACCACCCCGACGGCAAGCA
TGGCTGGACTATGCCTTGGAGGAGGGATTGTAAGCACTGCCGCATACAAGTCAGTAGGAGATGGTCGTATCACTTTTCAA
CAAGGATGGCCGAGAGGAATTCCCGGAGGAGAACTACCAAGCATTGAGAGAGCGGTGCTAATCACCATCAGGAACAGTGC
ACTGGACGAACTGAA-------TACGATGGATGATGGTTGTCTTCAACGAGGTCTAATTATGAGATTGTCAGGAATAAG-
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>chr4A_1
TTTTCCATTCTTACTCATTCCTTTTAGTTAACTTTGTCTTTCATCCCTTAGTCATCAGTTTTCATTCTCGATGTATATTT
AATTATTATTCAGTTCCATCCATGTTCATTATCTTGATATTGATCATTCTTTTGCTGTTAGATAACTAATCTTTAGTGCA
ACCCCTTCAGT-CC-TTTTTAGTCATTGTTTGTCTTGGTGAAGTAAAACATGGCATGATCAGATTTGTCTATGAACTTAG
TTTGTCCTCAATCATCTTCATTGTAACTTTTGTTTTTGTTAAACATTTGATTTGGCAATCA-TTTTTTGTGTTATGACCT
CAGTTTTGTTATCTTCATCATTCTATCTACACAACTTGCTCATTTTTATTTCATCATGCTTTCTGGTTAGTTTTAAAAGT
GATATTAGCTGGCAAGTTGTTATCATGTAGATGCCCTTTTAAGGTAGCCTCCAATTTGAGGACCACCCTGACGGCAAGCA
TGGCTGGACTATGCCTTGGGGGAGGGATCGTAAGCACTGCCGCATACAAGTCAGTAG---------------CTTTTCAA
CAAGGATGGCTGAGAGGAATTCCCGGAGGAGAACTACCAAGCATTGAGAGAGCGGTGCTAATCACCATCAGGAACAGTGC
ACTGGACGAACTGAATAGTGAATACGATGGACGATGGTTGTCTTCAACGAGGTCTAATTATGAGATTGTCACGAATAAG-
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----
>chr4A_1
TTTTCCACTCTTACTCATTCCTTTTAGTTAACTTTGTCTTTCATCCCTTAGTCTTTAGTTATCATTCTCGATGTATATTT
AATTATATTTCAGTTCCATCCATGTTCATTATCTTGATATTGATCATTCTTTCGCTGTTAGATAACTAATCTTTAGTGCA
ACCCCTTCAGT-CCCTTTTTAGTCACTGTTTGTCTTGGTGAAGTAAAACATGGCATGATCAGATTTGTCTACGAACTTAG
TTTGTCCTCAATCATCTTCATTGTAACTTTTGTTTTTGTTAAACATTTGATTTGGC-ATCA-TTTTTTGTC-TATGACCT
CAGTTTTGTTATCTTCATCATTCTATCTACACAACTTGCTCATTTTTATTTCATCATGCTTTTTGGTTAGTTTCAAAAGT
GATA----------------------------------------------------------------------------
------------------------------------CTGCCGCATACAAGTCAGTAACAGATGGTCATATCGCTTTTCAA
CAAGGATGGTTGAGAGGAATTCCCGGAGGAGAACTACCAAGCATTGAGAGAGCGGTGCTAATCACCATCAGGAACAGTGC
ACTGGACGAACTGAA-------TACGATGGACGATGGTTGTCTTCAACGAGGTCTAATTATGAGATTGTCAGGAATAAG-
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----
>chr3D_107
--------------------------------------------------------------------------------
--------------------------CATTATCTTGATATTGATCATTCTTTTGCTGTTAGATAACTAATCTTTAGTGCA
ACCCCTTCACC-----------------------------AAGTAAAAACTGGCATGATCAGATTTGTCTATGAACTTAG
TTTGTCCTCAGTCATCTTCATTGTAACTTTTGTATTTGTTAAACATTTGATTTCGC-ATCAG--TTTTGTC-TATGCCCT
TAGTTTTGTCATCTTCATTATTCTATCTACACAACTTGCTCATTCTTATTTCTTCATTCTTTTTGGTTAGTTTCGAAAGT
GATATTAGCTACCAAGTTGTCATCATGTGGATGCCCTTTTAAGGTAGCCTCCAGCTTGCGGACCACCCCGACGGTAGGCA
TGGCAGGAATATGCCTTGGGGGATGGATTGTAAGCACTGCCGCGTACAAGACAGTAGCAGATGGTCGTATCGCTTTTCAA
CAAGGATGTCTGGGAGGAATTCCTGGAGGAGAACTACCTAGCATTGACAGAGCGTTGCTAATCACCATCAGGAACAGTGC
ACTAGACGAACTGAAC--------------ATGATGGTTGTCTTCAACGAGATCTAATTATGAGATTGTCAGGAATAAG-
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----
>chr2D_667
AAGAAT--------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
GAAAATCTGCTTCTGTGCTCGGGCTCAGCTGATCCCGCAATCCACACCGATCAGTTTGCATTAGGATTCGTGCGTATCTC
TGTATTTTCTGTCGTATGCCTCTTTCTCTGGAGTGGAGCACAGTAAGCATTTATTGCGTCGGATCGTTTCGCTGGCTTTG
CGGGACAGATAGAGGCTGGATGGCTCGTTTTCTTATCGGTGCTAACGTCGCCCGGGG-ACAGCTACACCATTGATGGCTC
GCCACTTTATCTGAGCCACCCTGAGCCGTATGGGCTAACTCCTCCCATGGACGGCGTCAACACGTCTGCAAACATAAAAT
GCATCCCCA----CACAGACCATCTGCCCATAGCTCTCATTAACTTCCCCAT---CTACCTCCAACATCTATTTTTCTCC
CCCATATCCTCCTCCGTCCTCGTCTCCGGCGACATGTCCGCTTCATCTTCATCATCTCTCCCTGTCCCGGCGGACTGGTT
GCTACCCCTGATGGCATGTCCACTCTGCGGCCACGAGTTAGTGACAGCCGTCGCAAGGAGTGGGAACAATGTTGG-CACC
GATTCTACAAGTGCATCCGCTACGATGTAAGTACTTTTTGATCCGATT-TTGCCAGATTTTCCTTATTGAATCAACTCTT
CGCACGCATTTCGACCC-TTTCACGTTCTCATGCGAACTTGTTGTCCCTTCCATGTTCTTTCAGTCAAGGCAGTGCCGTT
TCTTTGAGTTCCAGCGTGCGTACAACATGAGGATGACTCATGAGCAGATCCTGGCTATGCAGCACCAGGCCGGATGGCAC
CCACCCGGGTTTGGATTCGCGCCCCAGCAGGGAAATGGTCCTTCTCAGATGGTTCGTGCTACCATCCAACCCCAGATCCA
GGCGCAGTTGCAGCC------------------------------------------GCAGATGCAGCCGCAGACGCAGC
CTCAGATCCAGTCTCCGATGCAGCAGCTTCCCCCGGCGGGCAACAATATGATAGCTGAC---------------GC----
-----------CGGAGTCGGAGCAGCATATGGAGCACAAGGCCTAGGTGCAGTCGCTGTTCTTATGGCTGCAGTGAACAT
CATGCTAACTGTTGTGCTGTTGATGGTTGTGTTAGCTAAGTAATCTCCGTAGGTATTCTAGGGCACTCCTTTATTAATA-
----------GC-----------GCTATGCAAGTGCTAACTATTTTAGTGTAACCAATGGTGGCTCCCTTTACCGCTCAG
CCTAT-----------------------------TTGAGACGACGAGCCAGGTTTTGAGCTGTTGTGCTATTCGACAACC
AACTATGTAATGCTTTATCAGACCTTCATTAAGCTCCC-TTTTT-T-ATTATTTTGCTGGGTTCAGATTGTATGAATTTT
TACATCTCCCCCTATGCAACGGGGTTAGTTGAGCTAACACTCTCAGAAACACATCATGTGTGCGAATCAGCAGCTCAACG
AAGCTGCCATGTTTTCTCATCACAAACCATTAATCTCTAGCGTGCACGTCCATCCACACCCAGTATAAATGCTGAACCAT
GTT-TGACATATCAACGTCTAGGAGAGGTTCACCGTTTCGTTATGCC-ACACGTCCCAATACACGCGTCTCCCCTCGCCG
CACCGTTTCCTTTA-TTTTTTTGGATTCGCGAGGGCAGAATCGTCAT----------CACGCATTATATCCCTATCCCAC
GGTTCCACCCACACCACCACTCATATCCTGCCCATTTCTTCCCCACCCGCCGCCGGAGAGCAGTACCAGCTATTCTACCG
GTCGATCCCGGCGCAAATTCAGCTCTTGCATGATTCAGGCCCCTCATCGGTCATACCACCATGGTAAGCTGTAGATTTTA
CCTTTTTTT-TAT---AGCTCT---TCTGTATCTAGCGTCATAGATTGTA---TGCCTGGATCTGAATCTTGTCCGGGTC
T---------------CCCCTTTTTTTC-TTCCTC-GCAGGATGATAGTAGTTCGCAGTTCGGCAGCTGCGGAGCAACGG
ACGCTCGTTATGTTAAGGACGTCGCTCAGGCAGCTGCGCCTTGCCCTCTTGTTCACCCAGAGGGCTCATCTTCAAGTGCT
AAGTCGGTAGATCCACCTGCACCAACATCACGCATCTCCATCAAGCATGCAGCTTGTGTCATTCAGAAGTTTGACGACTA
CAAG
>chr1D_670
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----------------------------------------------------------------------------AAGC
GAAAATCTGCTTCTATGCTCGGGCTCAGCTGATCCCGCAATCCACACCGATCAGTTTGCATTAGGATTCGTGCGTATCTC
TGTATTTTCTGTCGTATGCCTCTTTCTCTGGAGTGGAGGACGGTAAGCATTTATTGCGTCGGATCGTTTCGCTGGCTTTG
CGGGACAGATAGAGGCTGGATGGCTCGTTTTCTTATCGGTCCTAACGTCGCCCGGGG-ACAGCTACACCATTGATGGCTC
GCCACTTTATCTGAGCCACCCTGAGCCGTATGGGCTAACTCCTCCCATGGACGGCGTCAACACGTCTGCAAACATAAAAT
GCATCCCCA----CCTAGACCATCTGCCCATAGCTCTCATTAACTCCCCCAT---CTACCTCCAACATCTCTTTTCCTCC
CCCATATCCTCCTCCGTCCTCGTCTCCGGCGACATGTCCGCTTCATCTTCATCATCTCTCCCCGTCCCGGCGGACTGGTT
GCTACCCCTGATGGCATGTCCACTCTGCGGCCACGAGTTAGTGACAGCCGTCGCAAGGAGTGGGAACAACGTTGGGCACC
GATTCTACAAGTGCATCCGCTACGATGTAAGTACTTTTTGATCCGATT-TTGCCAGATTTTCCTTATTGAATCAACTGTT
CGCACGCATTTTGACCC-TTTCACGTTCTCATGCGAACTTGTCATCCCTTCCATGTTCTTTCAGTCAAGGCAGTGCCGTT
TCTTCGAGTTCCAGCGTGCGTACAGCATGAGGATGACTCATGAGCAGATCCTGGCTGTGCAGCACCAGGCCGGATGGCAC
CCACCCGGGTTTGGATTCGCGCCCCAGCAGGGAAATGGTCCTTCTCAGATGGTTCGTGCTGCCATCCAACCCCAGATCCA
GGCGCAGTTGCAGCC------------------------------------------GCAGAT------------GCAGC
CTCAGATCCAGTCTCCGATGCAGCAGCTTCCCCCAGCGGGCAACAATATGATAGCTGAC---------------GC----
-----------CGGAGTCGGAGCAGCATATGGAGCACAAGGCCTAGGTGCAGTCGCTGTTCTTATGGCTGCAGTGAACAT
CATGCTAACTGTTGTGCTGTTGATGGTTGTGTTAGCTAAGTAATCTCCGTAGGTATTCTAGGGCACTCCTTTATTAATA-
----------GC-----------GTTATGCAAGTTCTAACTATTTTAGTGTAACCAATGGTGGCTCCCTTTACCGCTCGG
CCTAT-----------------------------TTGAGACGACGACCCAGGTTTTGAGCTGTTGTGCTATTCGACAACC
AACTATGTAATGCTTTATCAGACCTTCATTAAGCTCCCATTTTT-T-ATTATTTTGCTGGGTTCAGATTGTATGAATTTT
TACATCTCCCCCTATGCAACGGGGTTAGTTGAGCTAACACTCTCAGAAACACATCATGTGTGCGAATCAGCAGCTCAACG
AAGCTGCCATGTTTTCTCATCACAAACCATTAATCTCTAGCGTGCACGTCCATCCACACCCAGTATAAATGCTGAACCAT
GTT-TGACATATCAACGTCTAGGAGAGGTTCACCGTTTCATTATGCC-ACACGTCCCAGTACACGCGTCTCCCCTCGCCG
CACCGTTTCCTTTA-TTTTTTTGGATTCGCGAGGGCAGAATCGTCAT----------CACGCATTATATCCCTATCCCAC
GGTTCCACCCACACCACCACTCATATCCTGCCCATTTCTTCCCCACCCGCCGCCGGAGAGCAGTACCAGCTATTCTACCG
GTCGATCCCGTCTCAAATTCAGCTCTTGCATGATTCAGGCCCCTCATCGGTCATACCACCATGGTAAGCTGTAGATTTTA
CCTTTTTTTCTAT---AGCTCT---TCTCTATCTAGCGTCATAGATTGTA---TGCCTGGATCTGAATCTTGTCCGGGTC
T---------------CCCCTTTTTTTTGTTCCTC-GCAGGATGATAGTAGTTCGCAGTCCGGCAGCTGCGGAGCAGCGG
ACGCTCGTTATGTTAAGGACGTTGCTCAGGCAGCTGCGCCTTGCCCTCTTGTTCACCCAGAGGGCTCATCTACAAGTGCT
AAGTCGGCAGATCCACCTGCACCAACATCACGCATCTCCATCAAGCATGCAGCTTGTGTCATTCAGAAGTTTGACGACTA
CAAG
>chr1A_672
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------------------------------------------------------------------------------GC
GAAAATCTGCTTCTGAGCTCGGGCTCAGATGATCCCGCAATCCACACCCATGGTTTTGCATCAGGATTTGTGCTTCTTTG
GGTATTTTCGGCCGTATTT-TCGTTGTCTGGCGCAGCGGACTGTCAGCATTTATTGCTACGGAGCGTTGGGCTGCCGTCG
CGGGACAGATAGAGGCCCGATGGCTCGTCATCTTATCTGAGCTAACGTCGTCGCGGG-ACAGCTCTAGGATAGATGGCTC
GGCACTTTACCTGAGCCACCCTGAGCCGTATGACTTAAGTTTTAACACTGACGGCGTCAACACGTCTGGAAACATAAATG
CATTGGCCTACCC-TCAGCCCATCTGCCCAACGCTCTCATTCACTCTCCCATT-----CCCCCAGTCTCTCCATTGTTCA
CTCATACCCAGCTCCGTCCCCATCTCCAGCGACATGTCCGCTTCGTCTACATCATCTCTCCCCGTCCCGGTGGACTGGCT
GCTACCCCTGATGGCATGTCCACTCTGCGGCGACGAGGTAGTGACAGCCGTCGCAAGGAGTGGGAACCAGGTTGGGCATC
GTTTCTACAAGTGCATCCGTTATGATGCAAGTATTTTTTGATCCGATC-TTGTCAGGTTTTTCATATTGAATCAAGATTT
CACACACATCTCACC-----------------------------------------------------------------
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>chr2D_673
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-------------------------------------------------------------------------------C
GAAAATCTGCTTCTGAGCTCGGGCTCAGATGATTCCGCAATCCACACCGATGGTTTTGCATCAGGATTTGTGCGTCTTTG
GGTATTTTCGGCCGTATTT-TCGTTGTCTGGCGCGGCAGACTGTCAGCATTTATTGCTACGGAGCGTTGGGCTACTGCCG
CCGGACAGATAGAGGCCCGATGGCTCGTCATCTTATCTGAGCTCATGTCGTTGCGGG-ACAGCTCTACGATAGATGGCTA
GGCACTTTACCTGAGCCACCCTAAGCCGTATGACTTAAGTTTCCACAACGACGGCGTCAACACGTCTGGAAACATAAATT
CATTGGCCTACCC-TCAGCCCATCTGCCCAACGCTCTCATTCACTCTCCCATT------CCCCAGTCTCTCCATTGTTCA
CTCATACCCAACTCCGTCCCCATCTCCGGCGACATGTCCGCTTCGTCTACATCCTCTCTCCCCGTCCCGGCGGACTGGCT
GCTACCCCTGATGGCATATCCACTCTGCGGCGACGAGGTAGTGACAGACGTCGCAAGGAGTGGGAATCAGGTTGGGCATC
GTTTCTACAAATGCATCCGTTATGATGTAAGTATTTTTTGATCCGATC-TTGTCAGGTTTTTCATATTGAATCAAGATTT
CACACACATCTCACC-----------------------------------------------------------------
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>chr5B_673
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-------------------------------------------------------------------------------C
GAAAATCTGCTTCTGAGCTCGAGCTCAGCTGCTCCCACAATCCGCACCGATCGGTTTGCATCAGGATATGTGCGTCTGTC
TGTATATTATGTCGTATTTCTCCTTTCCTGGCGTGGTGAACAGTTCGCAATCATTGCGACGGAGACTTACGCTGCCATTG
CGGTACAGAGAGAGGCTCGATGGCTCGGTTTCTTAACTGGGCTAACGGCGTCCTGGGGACAGATATAGCGTTGATGGCTC
GCCGCCTTATCTGAGCCACCCTGAGCCGTATGAGCTAACTTCTCACATGGACGGCGTCAACTCGTCTGCAACCATGAATT
AATTCCCAAC-CTATCAGCCCATCTGCCCGACCATCTCATTTACCTCCCCCCATCCCCCCTCCCACATCTCCCGTGCTCA
CACAAATACGGCACCGTCCTCGCCTCCGGCGACATGTCCGCTTCATACTCATCATCTCTCCCCATCCCGGCGGACTGGCT
GCTACCCCTGATGGCATGTCCACTCTGCGGCGATGAGTTAGTGACGGTCGTCGCAAGGACTGGAAACAATGTTGGGCATC
GATTCTACAAGTGCATCCGCTATGATGTAAGTACTTCTTTATCCGATCTTTGCCAGTTTTTCCCTATTGAATCAAGTTTT
CGCACAA--GTCACCGCTCT--------------GAACTACACGCCCCTTGCATGTTCTTGCAGTCACGCCAGTGCCGTT
TCTTCGAGTTCTAGCGCGCGTACTGCAGGAGGATGACCCATGAGCAGATCCTGGATGTGCAGCACCAGGCCGGATGGCAC
CCACCCGGGTTTGGACTCGCCCCCCAGCACGGCAATGGTCCTGCTCAGCTGGTTCCTGCTGCGATCCAGCACCAGATCCA
GGCACACATTCAGCCGCATGCGCAGGCGCAA------------------------ATGCAGCC------------GCAGC
CGCATATCCAGGCTCCGATGCAGCAGCTCCCCCCGGCGGGCAACAATATGGTAGCTGACGCTGGAAGGCCTGCTGC----
-----------CGGAGTCGGAGCAGCTTATGGCGCACAAGGCCTAGCTGCAGTCGCCGTTCTTATGGCAGCAGTCAACAT
CATTCTTACTGTTCTGGTGCTAATGGTTGTGTTAGCTAAGTAATGTCTGTAGGTTTGCTAGGGCACTCCTTAATTAATAT
CCGCCTATGCGC-----------GCTATGCAAGGTCTAAATTTTTAAGTGTAAGCAAGGGTGGCTCCCTTTACCGCTAAG
CCTGT-----------------------------TTG----------------------------TGCTAATCAACATCC
AAATATGTAATGCTTTGTAAGACCTGAATTAAGCTCCCACCATTAT-ATTATTTGCCTGGTTTCACATTGTATT-TTTTT
TACATCT---GCTGTGCAACGGGGTTTGTTTACCTGGCACTCTCATTAGCATATAATGTGTGCGAATCAGCACCTAAGGG
GAGCTGCCATGTTGTCTAACATCAAAGCATGCAT----------CACGCCCATCCA-ACCCACTCAATCTGCCTGATCAA
ACTGTGACATATCAACTTCTAGTAGAGGTTCACCGCTTTGTTAGGCCAACACGTCCCAGTCCACGCGTCGCCCCCCGCCG
CACCGTTAACCTTG-TTTTTTTCTTTTCGCGGGGGTACTACCGTCATTTCTATTGAGCATGCATTATATCCCTATCTCAC
GGTTTCACCTACACCAGCCCTCATGTCCTGTCCATGTCGCCCCAACCTGCCGCCAGAGAGCAGTTCCAGCTAATCTACGG
TTCGCTCCCGGCGCAAATTCACCCGTGGCTTGATTCGCTGTAGGCATC------ACCACCATGGTAAGCTGCAGATTTTG
CCTAGTTTTCTTT----TCCAGTTATTTACATCTAGTTCCATAGAGCGATC--TGCCTGGATCTGAATCTTGTGCGGGTT
GAAAACTCCATTCCTCTCCTTTTATTTC-TTGCTTTGTAGGATGATAGTACTTCGCAGTCCGGCAGCTGTGGAGCAGGCG
ACGCTCGTTATGGTAAGGACGTCGCTCACGCCGCTGCGCCTTGCCCTGTTGCTCACCCGGAGGGCTCATCTTCAACTGCT
AAGTCGGCAGATCCACCCGCGCCAACATCACGCATCTCCGTCAAGCATGCAACTAGTGTCATTCAGAAGTTTGACGACTA
CAAG
>chr2A_673
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
GAAAATCTGCTTCTGAGCTCGAGCTCAGCTGCTCCCACAATCCACACCGGTCGGTTTGCATCAGGATTTGTGCGTATGTG
TGTATATTATGTCGTATTTCTCCTTTCCTGGTGCGGTGAACAGCAAGCAATCATTGCGACCGAGCGTTACGCTGCCGTCG
CGGGACAGAGAGAGGCTGGATGGCTCGTTTTCTTAATTGAGCTAACGTTGTCCTGGG-ACAGATATAGCGTTGATGGCTC
GCCGCTTTATCTGAGCCACCCTGAGCCGTATGAGCTAACTTCTCACATGGACGGCGTCAACTCGTCTGCAAACATGAATT
AATTG-CCATGCTATCACCCCATCTGCCCGACCATCTCATTTACTTCCCCCCATCCTCCCTCCCACATCTCTTGTGCTCA
CACACATCCTGCTCCGTCCTCGTCTCCGGCGACATGTCCGCTTCATCCTCAGCATCTCTACCCGTCCCGGAGGACTGGCT
GCTACCCCTGATGGCATGTCCACTCTGCGGCGATGAGTTAGTGACGGCCGTCGCAAGGATTGGAAACAATGTTGGGCATC
GATTCTACAAGTGCATCCGCTATGATGTACGTACTTCTTTATCCGATCCTTGCCAGTTTTTCCTTATTGAATCAAGTTTT
CGCACATATGTCACCGGTCT--------------GAACTAGTCGCCCCTTCAATGTTTTTGCAATCACGGCACTGTCGTT
TCTTCGAGTTCCAGCGTGCGTACAGCAGGAGGATGACCCATGAGCAGATCCTGGATGTGCAGCACCAGGCCGGATG----
--------------------------------------------------------------------------------
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----
>chr1A_673
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
GAAAATCTGCTTCTGAGCTCGGGCTCAGATGATCCCGCAATCCACACCCATGGTTTTGCATCAGGATTTGTGCTTCTTTG
GGTATTTTAGGCCGTATTT-TCGTTGTCTGGCGCGGCGGACTGTCAGCATTTATTGCTACGGAGCGTTGGGCTGCCGTCG
CGGGACAGATAGAGGCCCGATGGCTCGTCATCTTATCTGAGCTAACGTCGTCGCGGG-ACAGCTCTACGATAGATGGCTC
GACACTTTACCTGAACCACCCTGAGCCGTATGACTTAAGTTTTAACACCGACGGCGTCAACACGTCTGGAAACATAAATG
CATTGGCCTACCC-TCAGCCCATCTGCCCAACGCTCTCATTCACTCTCCCATT-----CCCCCAGTCTCTCCATTGTTCA
CTCATACCCAGCTCCGTCCCCATCTCCGGCGACATGTCCGCTTCGTCTACATCATCTCTCCCCGTCCCGGCGGACTGGCT
GCTACCCCTGATGGCATGTCCACTCTGCGGCGACGAGGTAGTGACAGCCGTCGCAAGGAGTGGGAACCAGGTTGGGCATC
ATTTCTACAAGTGCATCCGTTATGATGCAAGTATTTTTTGATCCGATC-TTGTCAGGTTTTTCATATTGAATCAAGATTT
CACACACATCTCACC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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----
>chr5B_674
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GAAAATCTGCTTCTGAGCTCGGGCTCAGATGATCCCGCAATCCACACCCATGGTTTTGCATCAGGATTTGTGCTTCTTTG
GGTATTTTCGGCCGTATTT-TCGTTGTCTGGCGCGGCGGACTGTCAGCATTTATTGCTACGGAGCGTTGGGCTGCCGTCG
CGGGACAGATAGAGGCCCGATGGTTCGTCATCTTATCTGAGCTAACGTCGTCGCGGG-ACAGCTCTACGATAGATGGCTC
GGCACTTTACCTGAGCCACCCTGAGCCGTATGACTTAAGTTTTAACACCGACGGCGTCAACACGTCTGGAAACATAAATG
CATTGGCCTACCC-TCAGCCCATCTGCCCAACGCTCTCATTCACTCTCCCATT-----CCCCCAGTCTCTCCATTGTTCA
CTCATACCCAGCTCCGTCCCCATCTCCGGCGACATGTCCACTTCGTCTACATCATCTCTCCCCGTCCCGGCGGACTGGCT
GCTACCCCTGATGGCATGTCCACTCTGCGGCGACGAGGTAGTGACAGCCGTCGCAAGGAGTGGGAACCAGGTTGGGCATC
GTTTCTACAAGTGCATCCGTTATGATGCAAGTATTTTTTGATCCGATC-TTGTCAGGTTTTTCATATTGAATCAAGATTT
CACACACATCTCACC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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----
>chr2A_1460
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------GGATGGCAC
CCACCCGGGTTTGGATTCGCCCCCCAGCAGGGCAATGGTCCTGCTCAGCTGGTTCCTGCTGCGATCCAGCCCCAGATCCA
GGCACAGATTCAGCCGCATGCGCAGGTGCAGATGTAGCTGCCTGCGCAGCCGCAGATGCAGCC------------GCAGC
CGCGGATCCAAGATCCGATGCAGCATCTCCCCCCGGCGGGCAACAATATCGTAGCTGACGCTGGGAGGCCTGCTGC----
-----------CGGAGTCGGAGCAGCTTATGGCGCACAAGGCCTAGCTGCAGTCGCCATTCTTATGGCAGCAGTGAACAT
CATGCTTACTGTTCTGGTGCTAATGGTTGTGTTAGCTAAGTAATGTCTGTAGGTTTGCTAGGGCACTCCTTAATTAATA-
----------GCTCGCTATGCGCGCTATGCAAGTTTTAAATTTCTTAGTGTAAGCAAGGGTGGCCCCCTTTACCGCTAAG
CCTGTTTAAGACGACGGCCTAGATTTTACAGCTGTTG----------------------------TGCTAATCAACATCC
AAATATGTAATGCTTTGTCAGACCTGAATTAAGCTCCCACTATTAT-ATTATTTCGCTGGTTTCAGATTGTATTATTTTT
TACATCT---CCTGTGCAACGGGGTTTGTTTAGCTGACACTCTCATTGACATATAATGTGTGCGAATCAGCACCTAAGCG
GAGCTGCCATGTTGTCTAACATCAAAGCATGCAT----------CACGCACGTCCA-AACCACTCAGTCTGTCCGATCCA
ACTGTGACATATCAACGTCTAGTAGAGGTTCGCCGCTTTGATAAGCCAACACGTCCCAGTCCACGCGTCGCCCCCCGCCG
CACCGTTTCAGTTATTTTTTTTCTTTTTGAGGGGGTATACCCGTCATTTCCATTGAGCACGCATTATATCCCTATCTCAC
GGTTTCACCCACACCAGCACTCATTTCCTGTCCATGTCGTCCCAACCCGCCGCCGGAGAGCAGTACCAGCTAATCTACGG
TTCGCTCCCGGCGCAAATTCACCCCTGGCTTGATTCGCTGTAGGCATC------ACCACCATGGTAAGTTGCAGATTTTG
CCTACTTTT-TTT---ATCCATCTATTTAGATCTAGTTCCATAGAGCGATTTTTGCCTGGATCTGAATCTTGTGCGGGTT
GAAAATTCCATTCC-CCCCTTTTTTTTC-TTGCTC-GTAGGATGATAGTAGTTCGCAGTCCGGCAGCTGTGGAGCAGGCG
ACGCTCGTTATGGTAAGGACGTCGCTCACGCTGCTGCGCCTTGCCCTGTTGCTCACCCGGAGGGCTCATCTTCAACTGCT
AAGTCGGCAGATCCACCTGCGCCTACATCACGCATCTCTGTCAAGCATGCAGCTAGTGTCATTCAGAAGTTTGACGACTA
CAAG
>SNPs
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S------------------S-------------------
--------------------S-----------------------------------------------------------
--------------------S------------------------S------------------S---------------
----S--------------------------------------------------------------------------S
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
----------------S------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
------S-------------------------------------------------------------------------
----------------------------------------------------------------------------SSSS
SSSSSSSSSSS------------------------------------------S-S------------------------
--------------------------------------------S---S-------------------------------
-----------------------S--------------------------------------------------------
------------------------------------S------------------S------------------------
---------------------------S-----------S------S---------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
------------------------------------------------------S-------------------------
----------------S---------------------------------------------------------------
---------------------------------------------------------------------S----------
------------SSSS-----------------------S----------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>forward_842
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTTCTCTGGAGTGGAGCACC--------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_1814
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------TGTCGTTCTTATGGCTGCAGT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>forward_981
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
GCCACTTTATCTGAGCCACCA-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----
>reverse_2037
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------AAGACGACGACCCAGGTTTAG-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
