>input_sequence_69205
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-------------------------------------------------------CGGCCCGTTTCTTCTCATCCGCAGC
CATCCACCCACAGCCAAA--AG--AAAAAAAGAAATCTTTTCAAAAAAAAATCCGATTCGCTCCTCCTCTCGCGAAGCAA
CTGGTCTGCCGGCGCCAGCCACCCATGTCGTCGCTCGCTGCCGGCTACGGGCTGGACTTGGACCTGGAGTTGGGGATCTG
GTTCGCGGGCCTCTTCTCGGCGCCGGAACTGGCGGCGGCTGACCTGCTGCTGCAGCTCAGCGTACTCGGAGAGGCGGAGG
C------------------------------CACGAAGCCCTCGCGGTCTTCGGCCAGTTCGTGCTGCGAGGGCCTCTCC
GTCGGGGTGGAGGAGCGGGTCTTCGAGGAGACCCCGTCGTCGCCGTCCACGGAGCTGCTGGACGCGAGGGCGAGGAAGAG
GTACCGCCCGCTGTCAGAGCTCTACTCCGACACGATCCCGCCGA------CCTCCGCCGCCGCCGCCGTGAAGAAGAAGA
GGAGGAAGACGCACCACGACCACCGCGGGGCGTCATCGTCATGGGAGTCGGAGGCCACGAGGTACGGCGGAGACTACTAG
ACTACTAAAGAGTAGAGG----------TACACAGGTAGAAGACGGCTCTTGTGTAATTA--------------------
-CCGCCTCTCTTCAGAGAAGAAACGGGAAAAGACAAAATTGTGTTCAGAAAGAGGAAGCAGATGGTTAGCGGCTCCACCT
TTTGAATTTGAAATTTGAATCTGGCCTTCCGAGATCTGC-AAACATCAGAGCTCATCATTACCTACCAACTGCATGTAGC
GTTACCTCCTGCACGATTCGAA----------------------------------------------------------
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>chr5D_1_TraesCS5D01G338500
GCTCGCCCGTCTTGAGCCCCACCCGATCGGCTTCCGATCGGCCCGGATCCACCGCGGCTCCGGCGAGATCCGTCGCAGGA
CCCGTCGATTCCGCCAGCACGGGGTGGAGGGCGATGCGCCCCACCTGCGTGCGGAGCTCGTCGAGCTGGTTCTGCAGGCT
CGTCACCACTGGGCGCCAGAGCTCGAGGGAGGTCTCGATCGCGTCCAGCCGCGCGTCGTTGGCGGCGCGGCCTTCGTTGA
CGGACTTGATGAGCGCGGCAAGATGCTCCTCCATGGCCGCCGTCTTCAAGGCTTGTTTGGTGGTGTAGCGGGGGCGGGGG
TAGGCAGTCTCCAGATCGACCGACCTCTGATACCAGATGTAACAGGCCCGATCTACCTCAGCTCTCTCTCTGGATCAGAT
CTAGGAGGAAGGGAGTAGTTGGCGGTCAGGGAGAGGAAAAGGAAGGGAAGG-------ATAATTGG--------CGGAGG
AACAGCCTCTCTCTCGTTCACCAGTTATCTCAATAATCGATACCGAAATTGTGGCTCGCCCACCTACTTAACCAGCCGCG
AGCACGCAGGCATCGCTCGGCCCAACTACACACACCTAGCCCATCACTCCACTTGGCCTCCTGGCCCGGCTTCCTCACAG
TCCCCAGTGACTGGTGGGGTCGGCCTGACAGGCGTGACAATATGCACACACGAAACACGATTAACGGGTAGCAATTTCAA
CAGATCAATCTGACCCTACC------------------------------------------------------------
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--------------------CACTAACCAGGCACGCACCAGCTGATTCTCACGCAGCCTCCGCCGCCACGCGCTCCCGGC
CCGTTGGCAGCCCGCCTCAACGTTCGTCACGCGCGACCGATTCTGGTCCACCACCACCATCCAGATCCCGGGACCTCACG
CGCCAGCATCACCGGCACCAAACAACGTTGGTCCAACGTCTCCTCCAGTGGCCGCGCACGAGCCCGACACCGACCGAGCC
GGTTCCCCGTCCCCGACCTTCTAGGCTATAAAGCCGCGCGTGCAGCCCACGCCTCCGGCCCGTTTCTTCTCATCCGCAGC
CATCCACCCACAGCCAAA--AG--AAAAAAAGAAATCTTTTCAAAAAAAAATCCGATTCGCTCCTCCTCTCGCGAAGCAA
CTGGTCTGCCGGCGCCAGCCACCCATGTCGTCGCTCGCTGCCGGCTACGGGCTGGACTTGGACCTGGAGTTGGGGATCTG
GTTCGCGGGCCTCTTCTCGGCGCCGGAACTGGCGGCGGCTGACCTGCTGCTGCAGCTCAGCGTACTCGGAGAGGCGGAGG
C------------------------------CACGAAGCCCTCGCGGTCTTCGGCCAGTTCGTGCTGCGAGGGCCTCTCC
GTCGGGGTGGAGGAGCGGGTCTTCGAGGAGACCCCGTCGTCGCCGTCCACGGAGCTGCTGGACGCGAGGGCGAGGAAGAG
GTACCGCCCGCTGTCAGAGCTCTACTCCGACACGATCCCGCCGA------CCTCCGCCGCCGCCGCCGTGAAGAAGAAGA
GGAGGAAGACGCACCACGACCACCGCGGGGCGTCATCGTCATGGGAGTCGGAGGCCACGAGGTACGGCGGAGACTACTAG
ACTACTAAAGAGTAGAGG----------TACACAGGTAGAAGACGGCTCTTGTGTAATTA--------------------
-CCGCCTCTCTTCAGAGAAGAAACGGGAAAAGACAAAATTGTGTTCAGAAAGAGGAAGCAGATGGTTAGCGGCTCCACCT
TTTGAATTTGAAATTTGAATCTGGCCTTCCGAGATCTGC-AAACATCAGAGCTCATCATTACCTACCAACTGCATGTAGC
GTTACCTCCTGCACGATTCGAATTTGAATCTTCTCTCTC-----------------------------------------
---------------------------TAGGAGATTAGGAGTACTTAGTCGTATAGTTTGCTTGCAAGCGCACGCCACCG
ATCTTGGCATGCTCTGAATTTTCTTACCAAGTCGATTT--------TGTTCTAAAACTATCCTTTTAATCCAGCTATGTA
CTCTAGCAGTGCTCTTTCACGGGATTTGGGGCTAATTTTGTCCAAAAGTAGTATGTCAAAGATTTTTTTTTCCCCCTTCA
AC------------------------------------------------------------------------------
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-----------------------------------ATATCCTTGTCTGAATGTTCATCGCTACATGAAAGACTAGCTATG
TAGGCAGTTCCAGCTGGAGAGCTAGCTAGATAGCTTGATCTTATCTTGGCAAATTGAAGCAATATATATATGGAGTACAT
GAGACTAGAGCTGTTGTTGATTTCAGTATGAACACATGTAGTAAGTTTTATGTTACTCGCACTTTTTTCTGTTCAGCCTA
TGGGTCTGAAGATTTAGTCTTGATCACAATATTCAGTTAGCCAACACACCATGATAACTAGCAATTAAGGCGACCGTTG-
---GATCAACACAAAATATCGAAAATGGACATTGATAGTTCATAGAGAGAACGGTTAACGCGTAGATGACATCCTGATAT
GGGTGGGGCGAAGCCGGCCGGCAGCTAGTTTTTATTTTCTTTGCTGATTGTCTCTAAGTGGAAAGTTTTTCTGCTGTGGA
TCATAAGGGGAACCTTGCTTGGTGGAAACCAAGGGAGGTTGAGCTCAACAAGCAATGACATTCTTGGCAACAGGTACACG
CAGGAACTCCACCCAACCATGATTAGTTCCACCCAAAGCGTCCACTATGTACGTACGTATGTGGATGCATAGTTTG---A
GGCGTCTGATGCGAAGGGAATATTAACTGCAGTTGGCTCAAACCATATGTCAGATACATTCAAGATTCAACCGAAGCAAG
CAACATACTTCGCTATCTATATTTACAATTAAGTAAATCCGGAAATGGAAGCAATCTAACTGTGTGCGCGCACATATGAA
TCTAAAACTCATGACATA
>chr3A_1
GCGCGCCCGTCTTGAGCCCCACCAGATCGGCTTCAGATCGGCCCAAATCCACCGCGGCTCCGGCGAGATCCACCGCGGGA
CCCGTCGATTCCGCCAGCGCGGGGTGGAGGGCGATGCGCCCCACTTGCATGCGGAGCTCGTCGAGCTGGTTCTGCAGGCT
CATCACCGCTGGACGCCAGAGCTCGAGGGAGGTCTGGATCGCATCCAGCCGGGCGTCGTTGGCCGCGCGGCTCTCGTGGA
CGGACTTGACGAGAGCGGCGAGCTGCTCTTCCATCGCCGCCGTCTTCAGCGCCTGCTTGGTGGCGTAGCGCGGTCGGGGA
TAGGCCGTCTCCAGATCGTCTGACCTCTGATACCAGATGTAACAGGCCCGATCTACCTCAGCTATCTATTACAATCAGAT
CAAGAAGGAAGGAGGAGTAATTT-----GGGATCTGGAGAGGAAGGAGTGG-------AAAGGGAAATAATCGAAGGAGG
AGCAGCCTCTCTCTCTGTTGCCAGTTGTCTCCATAGTCGATACCGAATCCGTGGCTCAGCCACCTACTTAACCCATCACG
AGCACGCAGGCTAGGCTTGGCCCAACTACCCACACACA--CCGTCACTCAGCGAGGCCGGCTGGCCCAGCTGCATCAGAG
CCCACCACGGCTGGTGGGGTCGGTATGTCAGGCGTGACA-----------------------------------------
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>chr6D_4
---CGCCCGTCTTGAGCCCCACCGGATCGGCTTCAGATCGACCCGGATCCCCCGCGGCTCCGGTGAAATCCGCCGCAGGA
CCCGTCGATTCCGCCAACACGGGGTGGAGGGCGATGCGCCCCACTTGTGTGCGGAGCTCGTCGGTTTGGTTCTGCAGGCT
CGTCACCGCTGGGCGCCAGAGGTCGATGGAGGTCTGGATCGCATCCAGCCGGGCGTTGTTGGCCACGCGACTCTCGTGGA
CGGACTTGACGAGCGCGGCGAGCTGCTCCTCCATCGCCGCCGTCTTCAGCGCCTGCTTGGTGGCGTAGCGCGGTCGGGGG
TAGGCTGTCTCCAGATCGTCTGACCTCTGATACCAGATGTAACAGGCCCGATCTACCTCAGCTCTCTCTCTGGATCAGAT
CTAGG-GGAAGGAGGAGTGGTTGAGA---GGATCAGGAGAGGAAGGGAAGGGGATTGGATACTTGG--------AGGAGG
AGGAGCCTCGCTCACGTTTGCCAGTTGTCTCATTAGTCGATACAGAAACCGGGGCTCACCCACCTACTTAACCAATCGCG
AGCATGCAGGCAACGCTTGGCCCA--------------------------------------------------------
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>chr6A_4
---CGCCTGTCTTGAGCCCCACCAGATCGGCTTCAGATCGGCCCAAATCCGCCGCGGCTCTGGCGAGATCCACCGCGGGA
CC-GTCGATTCCGCCAGCGCGGGGTGGAGGGCGATGCGCCCCACTTGTGTGCGGAGCTTGTCGAGCTGGTTCTGCAGGCT
CGTCACCAAAGGACGCCAGAGCTCGAGGGAGGCCTGGATCGCATCCAGCCGGGCGTCGTTGGCCGCGCGGCTCTCGTGGA
TGGACTTGACGAGAGCGGCGAGCTGCTCTTCCATCGCCGCCGTCTTCAGCGCCTGCTTGGTGGCATAGCGCGGTCGGGGA
TAGGCCGTCTCCAGATTGTCTGACCTCTGATACCAGATGTAATAGGCCCAATCTACCTCAGCTATCTATTACAATCAGAT
CAAGGAGGAAGGAGGAGTAATTT-----GGGATCTGGAGAGGAAGGAGTGG-------AAAGGGGAATAATCGAAGGAGG
AGCAGCCTCTCTCTCTGTTGCCAGTTGTCTCCATAGTCGATACCGAATCCGTGGCTCAGCCACCTACTTAACCCATCGCG
AGCACGTAGGCTACGCTTGGCCCAACTACCCACACACA--CCGTCACTCAGCGAGGCCGGCTGGCCCAGCTGCATCAGAG
CCCACCACGGCTGGTGGGGTCGGTATGTCAGGCGTGACA-----------------------------------------
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>chr5A_687
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-------------------------------------------------------------TAACGGGTAGCAATTTCAA
CACATCAATCTGACCCTACC------------------------------------------------------------
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--------------------CACTAACCAGGCACGCACCAGCTGATTCTCACGCAGCCTCGGCCGCCACGCGCTCCCGTC
CCGTTGGCCGCCCGCCTCAACGTTCGTGACGCGCGACCGATTCCGGTCCACCACCACCATCCAGATCCATGGACCTCACA
CGCCAGCATCACC-------AACAACGCTGGTCCAACGTCTCCTCCCGTGGCCGCGCACGAGCCCGACGCCGACCGAGCC
GGTTCCCCATCCCCGAACTTCTAGGCTATAAAGCCGTGCGTGTAGCCCACGCCTCCGTCCCGTTTCTTCTCATCCGCAGC
CATCCATCCACAGCCAAAAGAAAAGAAAAAAGAAATCCTTT--AAAAAAAATCCGATTCGGTCCTCCTCTCGCGAATCAA
CTGCTCTGCCGGCGCCAGCCACCCATGTCGTCGCTCGCCGCCGGCTACGGGCTGGACTTGGACCTGGAGTTGGGGATCTC
GTTCGCGGGCCTCTTCTCGGCGCCGGAGCTAGCGGCGGCGGACCTGCTGCTGCAGCTCAGCGTACTCGGAGAGGCGGAGG
C------------------------------CACGAAGCCCTCGCGGTCTTCGGCGAGTTCGTGCTGCGAGGGCCTCTCC
GTCGAGGTGGAGGAGCGGGTCTTCGAGGAGACCCCGTCGTCGGCGTCTACAGAGCTGCTGGACACGAGGGCGAGGAAGAG
GTACCGCCCGCTGTCAGAGCTCTACTCCGACACGATCCCGCTCA------CCGCCGCCGCCGCCTCCGTGAATAAGAATA
GGAGGAAGACGCACCACGACCACGGCGGGGCGTCATCGTCATGGGAGTCGGAGGCGACGAGGTACGGCGGAGACTACTAG
A--------GAGTAGAGG----------TACACAGGTAGAGGACTGCTCTTGTGTAATTACCGCGTTGTTTCCCCCTATC
TCCGCCTCTCTTCAGAGAAGAAACGGGAAAAGACAAAATTGTGTTGAGAAAGACGAAGCAGATGGTTAGCGCCTCCACCT
TTTGAATTTGAAATTTGAATCTGGCCTTCCGAGATCTGC-AAACATCAGAGCTCATCATTACCTACCAACTGCATGTAGC
GTTACCTCCTCCACGATTCGAATTTGAATCTTCTCTCTCCATATAACTAGACAAGATCGAAGAATTGATCCATCCTGACG
TACGCCGGATTCGGCAGCCCAAAAGGCTAGGAGATTAGGAGTACGTTGTCGTATAGTTTGCTTGCAAGCACACGCCAAGG
TTCTTGGCATGCTCTGAATTTTCTTACAAAGTCGTTTTATCTTTTATGTTCTAAAACTAGCCTTTTAATCCAGCTATGTA
CACTAGCAGTGCTCTTTCACGGGAT-------------------------------------------------------
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---------------------------------------CTTATCTTGGCAAATTGAAGCCAG---TATATA---TACAT
GAGACTAGAGCTGTTGTTGATTTCAGTATGAACACGT---GTAAGTTTTATGTTACTCGCACTTTTTTCAGGTCCGCCTA
GATGTCTGAGGATTTAGTCTTGATCATCATATTCAGTTAGCCGACACACCATGATCACTAGCAATTAAGGCCACCGTTGT
AAGGATCAACACTCAATATTGAAAATGGACATTGATAGTTCATAGAGAGAATGGTTAACGCGGAGATGACAACCTGATAT
GGGTGGGACTAAGCCGGCCGGCAGCTAGGC-TTTTTTTCTTTGCTGATTCTGTCTAAGTGGAAAGGTTTTCTTCCGTTGA
TCATAAGGGGAACCTTGCTTGGTGGAAACCAAGGGAGGTTGAGCTCAACAAGCAATGACATTCTTGGCAACAGGTACATG
CAGGAACTCCACCCGACCATGATAAGTTCCACCCAAAGCGTCCACTATGCACGTACATATGTGGATGCATAGTTTGTAGA
GGCGTCTGATGTGAAGGGAATATTAACTGCAGTTGGCTCAGGCCATATGTCAGATACATTCAAAATTCAACGGAAGCAAG
CAACATACTTCGCTCTCTATATTTAGAATTAAGTAAATCCGAAAATGGAAGCAATCTAACTGTGTGCGCACACATATGGA
TGTAAAAC----------
>chr5B_687
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-------------------------------------------------------------TATCGGCTAGCAATTTCAA
CAGATCAATCTGACCCTACCCCAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGTGACTCGAGGGCAACTAGGG
TTTCCCCCGCGCCGCCACCCCCCTCAATCCCAGTCCCTCCTCGCTGCCACCTGAGGGGATCGACGGGCAAGCCTGGTGGG
TCGTCGATGAAGGTGGCGGTGAGGTGTTGTGTTGCTTCGTGCCCCCGCGAAGGACCTGGAAGCCGGGGCGGCGGCCCCGG
ACGGCGAGGCGGCGCTGCCTCCGCGACTGGCGGCGCCCGCAGGAAGTGGTGGCCGGCATCCTCGGCTGCCCGAGCAGCGA
GGATACGGCGGGCGGTCACGGCGCGGAGTTCCTCTGCCCCAGATCTGAAGGTCAGGCGCCCTCCTCCCCTGCTCTCTCAT
CCCCTCCGGTCGTGCCCTTCTGGGACTCTGGTCGCCAGATCCGGTGCTGGCGGGGTGCGGGTGCTCAGGTTCGAGTCCGG
GGGAAACCCTTGGCCGGTCCTTCGGCCACGACGGCGACGGCACGTGTGCGCGTCGTGTTCTTCCCTGGAGGCGCTGTGGA
GGGCTCTCCTCTAAACCCTCATCCCAGACCCCGGGTGAAAACCCAAAACCCGTCTCGGGTTGGCCAGCTGCGGCGCCTAG
CGCGTCGCGTCCTCGTTGGAGGCGCCGTCTGGGGTGTCTGGTTCTTCAGGAGAGGGTCCAGGTGGTTGGTGGGCGTCCGT
CGGCTGCGAGGCCAAGTTTTCGTTTTTGTGGAGGGTGCTCGTTCCTGCAAGAGCCCTTCTTGCAGCCATTGGAACGGGAC
CTGGTGCTTCTATGCTCCGCCTCTTGGCCTCTGCAGCTTTCTTCTTCGACGACCTCCCGACGGCTATCCTTCTGCTCCTA
GTTTGTTCGGGAGAGGTGGCAGTGCAGCTGTGGTGTGTGCCAGCGGCGTGGCGACGGTTGTGCACTTTGTCTGCGATGGG
AATCCGGCTGGCGTCTGCTCTAGTTCTCGGGTGAGCGCCAACGATCCGACGGTGCGGCGCCTTCGAGCCTAGGCGAGAGG
AAAGGGTTCCTCTTCGGCGTTGGGAGCGATGTTCTTCCCTTGTACCTGGGTTCAGACAGTTCACACCTTTCTCTGGCTAT
CGGCTGATCATTGAGGCTTCTCTGTTGCTCCTCTCTCTGCTGACTATGTGCAGTAGGCTTCGACTCTACTAGCAGGGCTC
TGCATGTTTTTTCTTTCTGCTGTAGTGTGTGTTGCATTGTTAGCTGTTCACTAAGCTCCATTGTATCTTTCGGTCGCTAT
TGCTTGGTGGCCTTGTGTAATCCTGGCCGGTTGATGGCTTTGTTAATTCAAAGCTGGGCTCCCCTTGAGCCTTCCTTCTA
AAAAAAAATCTGACCCTACCCACTAACCAGGCACGCACCAGCTGATTCTCACGCAGCCTCCGCCGCCACGCGCTCCCGTC
CCGTTGGCAGCCCGCCTCAACGTTTGTGACGCGGGACCGATTCCGGTCCACCACCACCATCCAGATCCAGGGACCTCACG
CGCCAGCATCACC-------AACAACGTTGGTCCAACGTCTCCTCCCGTGGCCGCGCACGAGCCCGACGCCGACCGAGCC
GGTTCCCCGTCCCCGACCTTCCAGGCTATAAAGCCGCGCGTGCAGCCCACGCCTCCGGCCCGTTTCTTCCCATCCGCAGC
CATCCACCCACAGCCAAA--AAGAAAAAGAAAAAATCCTTT----AAAAAAATCGATTCGCTAATCCTGTCGCGAAGCAA
CTGCT---CCGGCGCCAGCCACCCATGTCGTCGCTCGCCGCCGGCTACGGGCTGGACTTGGACCTGGAGTTGGGGATCTG
GTTCGCGGGCCTCTTCTCGGCGCCGGAGCTGGCAGCGGCGAACCTGCTGCTGCAGCTCAGCGTACTCGGAGGGGCGGAGG
C------------------------------CACGAAGCCCTCGCGGTCTTCGGCGAGTTCGTGCTGCGAGGGCCTCTCG
GTCGAGGTGGAGGAGCGGGTCTTCGAGGAGAACCCGTCGTCGGCGTCCACGGAGCTGCTGGACACGAGGGCGAGGAGGAG
GTACCGCCCGCTGTCAGAGCTCTACTCCGACACGATCCCGCTGACGTCCGCCGCCGCCGCCGCCGCCGTGAAGAAGAAGA
GGAGGAAGACGCACCACGACCACGGAGGGGCGTCATCGTCATGGGAGTCGGAGGCGACGAGGTACGGCGGAGACTACTAG
A--------GAGTAGAGG----------TACACAGGTAGAAGACGGCTCTTGTGTAATTACCGCCTCTCT----------
----------TTCAGAGAAGAAACGGGAAAAGACAAAATTGTGTTCAGAAAGACGAAGCAGATGGTTAGCGCCTCCGTCT
TTTGAATTTGAAATTTGAATCTGGCCTTCCGAGATCTGCAAAACATCAGAGCTCATCATTACCTACCAACTGCATGTAGC
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ACGCCACCG
ATCTTGGCATGCTCTGAATTTTCTTACCAAGTCGATTTT-------TGTTCTAAAACTATCCTTTTAATCCAGCTATGTA
CTCTAGTAGTGCTCTTTCACGGGATTTTGGTCAAATGTTGTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCCTTGTCTAAATGTTCATCGCTACTTGAAATACTAGCTATG
TTGGCAGTTCCAGCTAGAGAGCTAGCTAGATAGCTTGATCTTATCTTGGCAAGTTGAACCAATTAATATATA---TACAT
GAGACTAGAGCTGTTGTTGATTTCAGTATGAACACAC---GTAAGTTTTATGTTACTCGCACTTTTTCAGGTCTGTCTAC
G-TGTCTCAGGATTTAGTCTTGATCATCATATTCAGTTACCCGACACACCATGATCACTAGCAATTAAGGCGACCGTTGT
AGGGATCAACACTCAATGTTGAAAATGGGCATTGATAGTTCATAGAGAGAACGGTTAACGCGTAGATGACATCCTCATAT
TGGTGGGACGTAGCCGGCCGGCAGCTAGTGTTTTTTTTCTTTGCTGATTCGGTCTAAGTGGAAAGTTTTTCTTCTGTTGA
TCATAAGGGGAACCTTTCTTGGTGGAAGCCAAGGGAGGTTGAGCTCAACAAGCAATGACATTCCTGACAACAGGTGCACG
CAGGAACTCCACCCAACCATCATTAGTTCCACCCAAAGCGTCCACTATGTACGTACATATGTGGATGCATAGTTCGTAGA
GGCGTCTGATGTGAAGGGTAAATTAACGGCAGTTTGCTCAAATGATATGTCAGATACATTCAAAATTCAACCGAAGCAAG
CAACATACTTTGCTATCAATATTTAGAATTAAGTAAATCAGGAAATGGAGGCAATCTAACTGTTTGCGCCCACATATGAA
TATAAAACTCGTGACATA
>chr5D_965
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-------------------TCTCGGCTATAAAGCCGCGCGTGCAGCCCACGCCCATTACCCGTTTCTTCTCATCCGCACC
CACCCATCCCCGAG--------AACAAAAAAAAGTAGT----------AATTCCGATTCGCTCCTCCTCTCGCGAAGCAA
CTGGTCTGCCGGCGCCAGCCAGCCATGTCGTCGCTCGCCGTCGGCCGCGGGCCGGACCTGGACTTGGAGTTGGGGATCTG
GTTCGCGGGTCTCTTCTCTGGGCCGGAGCTTGCGGCGGCGGAGCTGCTGCTGCAGCTCAGCGTTCTCGGAGAGGCGAAGG
C------------------G------GAGCCCACCAAGTCCTCGCGGTGTTCGGCGGGCTCGCGCTGCGAGGGCCTCTCC
GTCGAGGCAGAGGAGCGGGTCGTCGAGGAGATTCCAGCGGCGGCGTACACGGA---GCTGGACAGGCGGGCGAGGAAGAG
GCACCGCCTGCTGTCGGAGCTCTACGCCGACACGATCCCCGCGAAATCCGCTGCCGCCGC---------GAAGAAGAAGA
GCAGGAAGACGCACCACGACCACGGCGGGTCGTCATCG------GAGTCCAAGGAGACGAGGTATGGCGGAGACTACTAG
A--------GAGTAGAGAGTAGAG--------------------------------------------------------
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>chr5B_965
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-------------------TCTCGGCTATAAAGCCGCGCGTGCAGCCCACGCCCATAACCCGTTTCTTCTCATCCGCACC
CACCCATCCCCGAGTCCCCGAGAACAAAAAAAAA-AGT----------TATTCCGATTCGCTCCTCCTCCCGCGAAGCAA
CTGGTCTGCCGGCGCCAGCCAACCATGTCGTCGCTCGCGGTCGGCCGCGGGCTGGACCTGGACTTGGAGTTGGGGAACTG
GTTCGCGGGTCTCTTCTCTGGGCCGGAGCTTGCGGCGGCGGAGCTGCTGCTGCAGCTCAGCGTTCTCAGAGAGGCGGAGG
CGGAGGCGAAGGCGAAGGCG------GAGCCCACCAAGTCCTCGCGGTGTTCGGCGGGCTCGCGCTGCGAGGGGCTGTCC
GTCGAGGCAGAGGAGCGGGTCGTCGAGGAGATTCCAGCGTCGGCGTCCACGGGA---CTGGACAGGCGGGCGAGGAAGAG
GTACCGCCTGCTGTCGGAGCTCTACGCCGACACGATCCTCGC------------------------------GAAGAAGA
GGAGGAAGACGCACCACGACCACGGCGGGCCGTCATCG------GAGTCCAAGGAGACGAGGTACGGCGGAGACTACTAG
A--------GAGGAGAGAAAGTACTACTTACACGGGTATAAAATGGCTCTTGTGTAATTACGCC----------------
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>chr5A_1064
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----------------------------AAAAAA-AGT----------AATTCCGATTCGCTCCTCCTCTCGCGAAGCAA
CTGGTCTGCCGGCGCCAGCCAGCCATGTCGTCGCTCGCCGTCGGCCGCGGGCTGGACCTGGACTTGGAGTTGGGGATCTG
GCTCGCGGGTCTCTTCTCTGGGCCGGAGCTTGCGGCGGCGGAGCTGCTGCTGCAGCTCAGCGTTCTCGGAGAGGCGGAGG
C------------------GAAGGCGGAGCCCACCAAGTCCTCGCGGTGTTCGGCGGGCTCGCGCTTCGAGGGCCTCTCC
GTCGAGGCAGAGGAGCGGGTCGTCCAGGAGATTCCAGCGTCGGCGTCCACGGA---GCTGGACAGGCGGGCGAGGAAGAG
GCACCGCCTGCTGTCGGAGCTCTACGCCGACACCATCCCCGCGAAATCCGATGCCGCCGC---------GAAGAAGAAGA
GGAGGAAGACGCATCACGACCACGGCGGGCCGTCATCG------GAGTCGAAGGAGACGAGGTACGGCGGAGACTACTAG
A--------GAGTAGAGAGAGTACTAC-TACACGGGTATAAAATGGCTCTTGTGTAATTACGCC----------------
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------------------
>SNPs
--S--------------------S----------S-------------------------------------S-------
--------------------------------------------S-----------------------------------
-----------------------------------S------S--------S-----------S-------SS----S--
---------S---------S--S-----------S-------------SS--S--S-------S------S--S------
-----S------------S-S-----------------------------------------------------------
------------SS-SSSSSSSSS-SSS----SSS-S-S----------------------S------------S-----
-S----------------SS------S--------S------------SS-------S----------------SS----
------------S----S-----------S-----SS-SS--S------SS-SS----SS-------S---S-S---S--
S--S-SSS-S-------------SS--S-----------SSSSSSSSSSSSSSSSSSSSSS-------------------
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------------------------------------------------------------------------------S-
---------------------------S---------------S------------------------S-----------
-------------SSSSSSS--------------------------S---------------------S-----------
--------------------------------------------------------------------------------
-----------------------------------------SS-------------------------------------
--------------------------------------S-----------------------------------------
---------------------------S-----------S----------------------------------------
-------------------------------------------------------S------------------------
----S-------------------------------------S--------------------S----------------
----------------------------------------------------S---------------------------
-----------------------S-------------------------------S------------------------
-SSSSSSSS-----------------------------------------------------------------------
-----------------------------------------------------S-----------------S--------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------S-S----------------------S----------
--------------------------------------------------------------------------------
---------------------------S--S-S---S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S---------------S-----S----------
-S-------------S-----------------------------------------------SS------SSSS-----
-------------------------------------SSS-----------------------------S----S-----
SSS------S----------------SS--------------S------------S------------------------
------------SS-----S------------------------------------------------------------
-------S---------------------S---S---------------S-S--------------------S----S--
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-----------S---------------------------------------------------S----------------
-------------------------S-------------------------------------------S----------
-S--------S-------
>forward_613
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------ACCTAGCCCATCACTCCACT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_3254
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GGAAGCAGATGGTTAGCGGC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_650
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTCCTCACAG
TCCCCAGTGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_4070
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TGTTCAGCCTA
TGGGTCTGA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
