>input_sequence_69196
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------------------------------------------------ATGAAAGTGAACGTGTATGGTGCAAAATTGAT
ATTAACCCGA--------CAGCTTACAAGTTTGTCTTTCTATTTCTGTTTTTCTTTTTTTCATACCCTCACAATCTGTTC
CCAAATTTTGCAGCTGTTTTTTT--CCATCAGTACATCACGAGCACTGGATATTGTTTATTGTTGATATTGTTGCAAGAA
AATTCATTTTCCTAGATTCAGTTTATTATGGCGAGTCACCCTTTCACATGGAGGTAAAAGATTTGATGGTAAGAGCAATG
TTTTTTGAGACTGTTATATTTTTT-AGTTGTCCTTTCTCTTGA-TTTTGGTACTGCAACAAATTAGCCATTTACGTGTTC
-----------CATTCTTCAACTTTTCATAGATAAACAATTTTATCAAAACATGGGAAGAGTCGAGACTCGGGAGAATGG
GGTTCAGAAACTTTGGTATAGAATACCCAAACATGCCTAAGCAAATTGGAAGGTACATTTCCACTCTTTTTTTTGTGGGA
AACACAAAAACACATCCAAAGATGCTTGT---TTTTCATTTTCTTTTCTGTGATCAATGTATGTTCATGTTGTTTTTAAT
CATTT-CTTTTCTGCATAAAACACAGA-GATGCTTGCGGGATTTTTGTGCTCAAGTGGATGCAAACTTTTGCTTCGCGGA
ATCCTCTCCAGCCCCAATTCAGGATGAAGGACGTGGCAGATGCAAGGGTCAGACTTGCTGTTGATATCCTCTTCAGCAAT
CATAACACTGATGATGATGCCAAAAGACTTGTCAAGTACTTTCGTCAATAA-----------------------------
--------------------------------------------------------------------------------
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----
>chr1D_1_TraesCS1D01G130000
TATTTTTGGGGGTATTTTAAATGTTTTTTTTCTGTTTGTGGTGCTCTTTTTTGGTTAGTTACTGAACACATCCCTTTCAA
CATTTTGTCCAAATTTGCAGAGTTACTTGACAACACCATTTATTGGCAAGAGGCTTTTTACAGACGAGGTCATCGAAGAA
GATGACCAAGATGGGACCAAAGATCAACCAATCCCTGTCATCGATGAGTTGCAAGTAAATCTGTGTTT-CCGTCTTTTCT
GTGTACCAATAACTTTCTTTTA--TGTTTTATTAATACAACACAAGCTAATCATTA------ATGTTCTGCTATTTTTTG
TATGTTT-TGTAGTTATCTCCGGACGTTCAAATTCTGGGGGAGAGAGTATT-----------------------------
--------------------------------------------------------------------------------
---------------------------------CAATGGTTCATGCTCTAACATGGTAAACACAGCAGACAATCTGTA-A
AACAGCAACCTTACATTAGGCAGTTACTCAAGTGGCAAGGAAAATCTGCCTCCCAAAAGGCTTGTACGCCCAAGCAAGTA
TCAATGCTCACCTTTCGATAACGATCTGAGAGGCCCTCTCACGCCACTTGAGAAGCAGCTACACAGCAACATTGTGGCAC
TAAGCAAAATTGAACCTGATAGAAGGGC----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AGTGTTGGTCGATAAAACCAGTCTATCCCTTGGACAACTCAGCAATT
CATTCGACACCAACGGACATGTGGAAGCTTATGTTTTCAATGTTTTCTGCCGGTTGCTCTTTCGTGATAACCATCCAAGG
CAATCAAAGAAGCACTACTTCTTCACTACTATCGATGTAAGTACAATTTCAGGT----------CAACTAAAACGTTTTT
TCAACTCAAAACATCTTTCTGAAGTTATTAATTTTGTTTGTACAACAATTAACGCACTTTTTTATGTGGAAGTTTGACAT
TTTTAATTGTTTTTTTGCCTCAAAATAGGATTATTTTCTTCAAGCATGGACTACTGAAGAAGGAAGGATATTAATGAGAA
GGAGAGCACTTATAAGTTTTAGTGGAGCAGGAACAACATTGCCTCTACATGAAAGTGAACGTGTATGGTGCAAAATTGAT
ATTAACCCGA--------CAGCTTACAAGTTTGTCTTTCTATTTCTGTTTTTCTTTTTTTCATACCCTCACAATCTGTTC
CCAAATTTTGCAGCTGTTTTTTT--CCATCAGTACATCACGAGCACTGGATATTGTTTATTGTTGATATTGTTGCAAGAA
AATTCATTTTCCTAGATTCAGTTTATTATGGCGAGTCACCCTTTCACATGGAGGTAAAAGATTTGATGGTAAGAGCAATG
TTTTTTGAGACTGTTATATTTTTT-AGTTGTCCTTTCTCTTGA-TTTTGGTACTGCAACAAATTAGCCATTTACGTGTTC
-----------CATTCTTCAACTTTTCATAGATAAACAATTTTATCAAAACATGGGAAGAGTCGAGACTCGGGAGAATGG
GGTTCAGAAACTTTGGTATAGAATACCCAAACATGCCTAAGCAAATTGGAAGGTACATTTCCACTCTTTTTTTTGTGGGA
AACACAAAAACACATCCAAAGATGCTTGT---TTTTCATTTTCTTTTCTGTGATCAATGTATGTTCATGTTGTTTTTAAT
CATTT-CTTTTCTGCATAAAACACAGA-GATGCTTGCGGGATTTTTGTGCTCAAGTGGATGCAAACTTTTGCTTCGCGGA
ATCCTCTCCAGCCCCAATTCAGGATGAAGGACGTGGCAGATGCAAGGGTCAGACTTGCTGTTGATATCCTCTTCAGCAAT
CATAACACTGATGATGATGCCAAAAGACTTGTCAAGTACTTTCGTCAATAAACTGGTA-TTTTACAGCAACAAATTTATT
CCCGTTTCT---------------------TCACATATAGAGGAAAGACAATAAACTAACATACAAAC------------
--------TTTCTCTCAGGGAGTTGAGGACAGCATTGATCTACAA-GGGGGGAGGGGCAAAAAGAATGAAGAAC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TAAATAAATACTCTAGATTTTTTAGATGTCTTTCTCTTTTTTT--GTACATGTTTTTTGTGTTCGCTCGA
TGAGTATCTTGGGAAAATCAACGGATATACCAAAGTAATGCAAAGAATTTTTTGTTCGGATGAAAAACA-TTTTTACAGT
GAAGGGTAATGGAAAGTATTTGTTTTGTCTTCTGTGCCAATGCTTTTCTTATTCGAACCTTCTTTCCTTTTTCTA----T
TTT-TAAAGAATATATTGCATCATTTTTTTTGGTGAAACTACTTCGCAAAGACAAAAAGAAAAGGAGAAGCAAATGCAGG
TAAAACCTCATTTTTAATTTTTCTGCTCACTGGATTTCAATCAACAATGATTTTTTTTTTTGCCATTTATCATTCAAGAA
ATTTCTAACCTTTCCTTTTTCTTTTCTGCTATGTCTCTTCTCCTTATACACTAGACAGCGGATTTTTTCAAACATGTCTA
CAGGAGAGGGGGGTGGGCGAAGAAAGTGCAATGCAAATGAAATTACGAAACACCTCAAGCAATATAGAAGAAATAATATG
TGCAAAGTATTATATCCAGGTACAAACATTACCAACCAAAGTTTTATTTTTTCTCTCGTATTTCTTACAATGAAGTATTT
TTCTCCCGCTTTGGGTACATGTTTATTTTTTTCAAGGTTTCCCGCACTGCCTAGGTGTTACTTGTCTTCTTTTCGATTCA
CTTTCTTCAAAAATCTTCTGCCTGAACTACAGCACTCCTTCAACCTGTGTGGCAGGTGCCTTCCTTCGTTGACGCTTAGC
TCCATTCTGTTTGCTAGTTGATGAATCAGAAGGACCTG------TTTTTTTCTTTTTGGTTAGTTACTAGTTTGATCTTC
TTCA
>chr3D_1
TATTTTTGGGGGTATTTTAAATGTTTTTTG--TGTTTGTGGTGCTCTTTTTTGGTTAGTTACTGAACACATCCCTTTCAA
CATTTTGTCCAAATTTGCAAAGTTACTTGACAACACCATTTATTGGCAAGAGGCTTTTTACAGACGAGGTCATCGAAGAA
GATGACCAAGATGGGACCAAAGATCAACCAATCCCTGTCATCGATGAGTTGCAAGTAAATCTGTGTTT-CCGTCTTTTCT
GTGTACCAATAACTTTCTTTTA--TGTTTTATTAATACAACACAAGCTAATCATTA------ATGTTCTGGTGTTTTTTG
TATGTTT-TGTAGTTATCTCCGGACGTTCAAATTCTGGGGGAGAGAGTATT-----------------------------
--------------------------------------------------------------------------------
---------------------------------CAATGGTTCATGCTCTAACATGGTAAACACAGCAGACAATCTGTACA
A-CAGCAACCTTACATTAGGCAGTTACTCAAGTGGCAAGGAAAATCTGCCTCCCAAAAGGCTTGTACGCCCAAGCAAGTA
TCAATGCTCACCTTTCGATAACGATCTGAGAGGCCCTCTCACGCCATCTGAGAAGCAGCTACACAGCAACATTGTGGCAC
TAGGCAAAATTGAACCTGATAGAAGGGC----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AGTGTTGGTCGATAAAACCAGTCTATCCCTTGGACAACTCGGCAATT
CATTCGACACCAACGGACATGTGGAAGCTTATGTTTTCAATGTTTTCTACCGGTTGCTCTTTCGTGATAACCATCCAAGG
CAATCAAAGAAGCACTACTTCTTCACTACTATCGCTGTAAGTACAATTTCAGGT----------CAACAAAAACATTTTT
TCAACTCAAAACATTTTTCTGAAGTTATTAATTTTGTTCGTACAACAATTAACGCACTTTTTTATGTGGAAGTTTGGCAT
TTTTAAA--TTTTTTTGCCTCAAAATAGGATTATTTTCTTCAAGCATGGACTACTGAAGAAGGAAGGATATCAATGAGAA
GGAGAGCACTTATAAGTTTTAGTGGAGCAGGAACAACATTGCCTCTACATGAAAGTGAACGTGTACGGTGCAAAATTGAT
ATTAACCCGA--------CAGCTTACAAGTTTGTCTTTCTATTTCTGTTTTTCTTTTCTTCATACCCTCAGAATCTGTTC
CCAAATTTTGCAGCTGTT-TTTT--CCATCAGTACATCACGAGCACTGGATATTGTTTATTGTTGATATTGTTGCAAGAA
AATTCATTTTCCTAGATTCAGTTTATGATGGCGAGTCACCCTTTCACATGGAGGTAAAAGATTTGATGGTAAGAGCAATG
TTTTTCGAGACTGTTATATTT-TT-AGTTGTCCTTTCTCTTGA-TTTTGGTACTGCAACAAATTAGCCATTTACGTGTTC
-----------CATTCTTCAACTTTTCATAGATAAACAATTTTCTCAAAACATGGGAAGAGTCGAGACTCAGGAGAATGG
GGTTCAGAAACTTTGGTATAGAATACCCAAACATGCCTAAGCAAATTGGAAGGTACATTTCCGCTCTTTTTTT-GTGGGA
AACACAAAAACACATCCAAAGATGCTTGT---TTTTCATTTTCTTTTCTGTGATCAATGTATGTTCATGTTGTTTTTAAT
CATTT-CTTTTCTGCATAAAACACATA-GATGCTTGCGGGATTTTTGTGCTCAAGTGGATGCAAACTTTTGCTTCGCGGA
ATCCTCTCCAGCCCCAATTCAGGATGAAGGACGTGGCAGATGCAAGGGTCAGACTTGCTGTTGATATCCTCTTCAGCAAT
CCTAACACTGATGATGATGCCAAAAGACTTGTCAAGTACTTTCGTCAATAAACTGGTA-TTTTACAGCAACAAATTTATT
CCCGTTTCT---------------------TCACATACAGAGGAAAGACAATAAACTAACATACAAAC------------
--------TTTCTCTCAGGGAGTTGAGGACAACATTGATCTACAAGGGGGGGAGGGGCAAAAAGAATGAAGAAC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TAAAGAAATACTCTAGATTTTTTAGATGTCTTTCTCTTTTTTTTTGTACATGTTTTTTGTGTTCGCTCGA
TGAGTATCTTGGGAAAATCAACGGATATACCAGAGTAATGCAAAGAATTTTTTGTTCGGATAAAAACATTTTTTTACATT
GAAGGGTAATGGAAAGTATTTGTTTTGTCTTCTGTGCCAATGCTTTTCTTATTTGAACCTTCTTTTCTTTTTCTA----T
TTTTTAAAGAATATACTGCATCATTTTTTTTGGTGAAACTACTTCACAAAGACAAAAAGAAAAGGAGAAGCAAATGCAGG
TAAAACCTCATTTTTAATTTTTCTGCTCACTGGATTTCAATCAACAATGA-TTTTTTTTTTGCCATTTATCATTCAAGAA
ATTTCTAACCTTTCCTTTTTCTTTTCTGCTATGTCTCTTCTCCTTATACACTAGACATCGGATTTTTTCAAACGTGTCTA
CAGGAGAGGGGGGTGGGCGAAGAAAGTGCAATGCAAATGAAATTACGAAACACCTCAAGCAATATAGAAGAAATAATATG
TGCAAAGTACTATATCCAGGTACAAACATTACCAACCAAAGTTTTATTTTTTCTCTCGTATTTCTTACAATGAAGTATTT
TTCTCCCGCTTTGGGTACATGTTTCTTTTTTTCAAGGTTTCCCGCACTGCCTAGGTGTTACATGTCTTCTTTTCGATTCA
CTTTCTTCAAAAATCTTCTGCCTGAACTACAGCACTCCTTCAACCTGTGTGGCAGGCGCCTTCCTTCGTTGACGCTTAGC
TCCATTCTGTTTGCTAGTTGATGAATCAGAAGGACCTG----TTTTTTTTTCTTTTTGGTTAGTTACTAGTTTGATCTTT
TC--
>chr7D_46
---------------------------------------------CTTTTTTGGTTAGTTACTGAACACATCCCTTTCAA
CATTTTGTCCCAATTTGCAGAGTTACTTGACAACACCATTTATTGGCAAGAGGCTTTTTACAGACGAGGTCATCGAAGAA
GATGACCAAGATGGGACCAAAGATCAACCAATCCCTGTCATCGATGAGTTGCAAGTAAATCTGTGTTT-CCCTCTTTT-T
GTGTACCAATAACTTTCTTTTA--TCTTTTATTAATACAACACAAGCTAATCATTATTTTTTATGTTCTGCTGTTTTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATGGTTCATGCTCTAATATGGTAAACACAGCAGACAATCTATA-C
AACAACAACCTTACATTAGGCAGTTACTCAAGTGGCAAGGAAAATCTGCCTCCCAAAAGGCTTGTACGCCCAAGCAAGTA
TCAATGCTCACCTTTCGATAACGATCTGAGAGGCCCTCTCACGCCACTTGAGAAGCAGCTACACAGCAACATTGTGGTAC
TAAGCAAAATTGAACCTGATAGAAGGGC----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GGTGTTGGTCGATAAAACCAGTCTATCCCTTGGACAACTCGGCAATT
CATTCGACACCAACGGACATGTGGAAGCTTATGTTTTCAATGTTTTCAATGTTTTCAATATCTATTAAAAACAACATGAA
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------ATGATGGCGAGTCACCCTTTCACATGGAGGTAAAAGATTTGATGGTAAGAGCAATG
TTTTTGGAGACTGTTATTG---TT-AGTTGTCCTTTCTCTTGA-TTTTGGTACTGCAACAAATTAGCCATTTACGTGTTC
-----------CATTCTTCAACTTTTCATAGATAAACAATTTTATCAAAACATGGGAAGAGTCGAGACTCGGGAGAATGG
GGTTCAGAAATTTTGGTATAGAATACCCAAACATGCCTAAGCAAATTGGAAGGTAGATTTCTGC-CTTTTTTT-GTGGGA
AACACAAAAACACATCCAGAGATGCTTGT---TTTTCATTTTCTTTTCTGTGATCAATGTATGTTCATGTTGTTTTTAAT
CATTT-CTTT-CTGCATAAAACACAGA-GATGCTTGCGGGATTTTTGTGCTCAAGTGGATGCAAACTTTTGCTTCGCGGA
ATCCTCTCCAGCCCCAATTCAGGATGAAGGACGTGGCAGATGCAAGGGTCAGATTTGCTGTTGATATCCTCTTCAGCAAT
CATAACACTGATGATGAAGCCAAAAGACTTGTCAAGTACTTTCGTTAATAAATTGGTA-TTTTACAGCAACAAATTTATT
CCCCTTTCT---------------------TCACATACAGAGGAAAGACAATAAGCTAACATACAAAC------------
--------TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAGTAAAGAAATACTCTAGATTTTTTAGATGTTTTCTC--TTTTTTTTGTACATGTTTTTTGTGTTCGCTCGA
TGAGTAATTTGGGAAAATCAACGGATATACCAGAGTAATGCAAAGAATTTTTTGTTCGGATGAAAAACA-TTTTTACAGT
GAAGGGTAATGGAAAGTATTTGTTT-GTCTTATGTGCCAATGCTTTTCTTATTCGAACCTTCTTTTCTTTTTCTA----T
TTTTTAAAGAATATATTGCATCATTTTTTT-GGTGAAACTACTACGTAAAGACAAAAAGAAAAGGAGAAGCAAATGCAGG
TAAAACCTCATTTTTAATTTTTCTGCTCACTGGAATTCAATCAACAATGA-TTTTTTTTTTGCCATTTATCATTCAACAA
ATTTCTAACCTTTTCTTTTTCTTTTCTGCTATGTCTCTTCTCCTTATTCACTAGACAGGGGATTTTGTCAAACATGTCTA
CAGGAGAGGGGGGTGGGGGAAGAAAGTGCAATGCAAATGAAATTATGAAACACCTCGAGCAATATAGAAGAAATAATATG
TGCAAAGTATTATATCCAGGTACAAACATTACCAACCAAAGTTTTATTTT-TCTCTCGCATTTCTTACAATGAAGTATTT
TTCTCCCGCTTTGGGTACATCTTTGTTTTTTTCAAGGTTTCCCGCCCTGCCTAGGTGTTACATGTCTTCTTTTCGATTCA
CTTTCTTCAAAAATCTTCTGCCTGAACTACAACACCCCTTCAACCTGTGTGGCAGGCGCCTTCCTTCGTTGATGCTTAGC
TCCATTCTGTTTGCTAGTTGATGAATCAGAAGGACCTG----TTTTTTTT-CTTTTTGGTTAGTGACTAGTTTGATATTT
TC--
>chr5D_46
---------------------------------------------CTTTTTTGCTTAGTTACTGAACACATCCTTTTCAA
CAATTTGTCCCAATTTGCAGAGCTACTTGACAACACCATTTATTGGCAAGAGGCTTTTTACAGACGAGTTCATTGAAGAA
GATGACCAAGATGGGACCGAAGATCAACCAATCAATGTCAACAATGTGTTTCAAGTAAATCTGT-TTT-CCCTCTTTT-T
GTGCAGCAATAACTTTCTTTTA--TCTTTTCTTAATACAACACAAGTTAATCATTATTTTTTATGTTGTGCCATTTTTTG
TATGTTT-TTTAGGTACCTCCGGACGTTCAAATTCTGGGGGAGAGAGTATT-----------------------------
--------------------------------------------------------------------------------
---------------------------------CAATGGTTCATGCTCTAATATGGTAAACACAGTAGACAATCTGTACA
AACATCAAGCTTACATTAGGCAGTTACTCAAGTGGCAAGGAAAATCTGCCTCCCAAAAGGCTAGTACGCCCAAGCAAGTA
TCAATGCTCACCTTTCGAGCACGATATGAGAGGTGCTCTCATGCCACTTGAGAAGCAGCTACACAGCAACATTGTGACAC
TAAGCAAATTTGAACCAAACAGAAGG------------------------------------------------------
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----
>chr4B_47
----------------------------------------------TTTTTTGCTTAGTTAGTGAATACATCATTATCAA
CAATTTGTCCCAATTTGCAGAGTTACTGGACAACACCATTTATTGGAAAGAGGTTTTTTACAGACGCGTTCATTGAACAA
GATGATCAAGATGGGAACGAATATCAACCAATCCCTGTCAATGCTGATTTACAAGTAATTCTGT-TTT-CCCTCTTTT-T
GTGTAGCAATAACTTCCTTTTA--TCTTTTCTTAATACAACACAAGCTAATCATTATTAGT----TTGTGCCA-TTTTTG
TATGTTTTTGTAGTTATCTTCGGACGTTCAAATTTTGGGGGAGAGAGTTTT-----------------------------
--------------------------------------------------------------------------------
---------------------------------CAATGGTTCATGCTCTAATATGGTAAACACAACAGACAATCTGTACA
A-CAACAATCTTACATTAGGCAATTACTCAAGTGGCAAGGAAAATCTGCCTCCCAAAAGGCTTGTACGCCCAAGCAAGTA
TCAATGCTCACCTTTCGATCACGATCTGAGAGGCCCTGTCACGACACTTGAGAAGCAGCTACACAAAAACATTGTGACAC
TAAGCAAATATGAACCTAACATAAGGTTTTCTTTTACATTCTTTTTTTTCATTTTTTACCTCTCTTTCTTATTGTTTCGT
CATTTTTCACTTAATTCTTTTTTCTCCTTTTTCTACTGCTTGAATCTTTTTGTTTGCGCTTCTTTCTCCACCTCACTTTT
GATGTTTTTTTCTCCCACTTGCCACAAATGGGTAGTGCTTGTCGATAAAACAAGCCTATCCCTTGGACAACTCCGTGATT
CATTCGACACCAACAGACGTGTGGAAGCCTATGTTTTCAATGTTTTCTGCCGGTTGCTCTTTCGAGACAGCCATCCAAGG
CAATCAAAGAAGCACTACTTCTTCACTACTCTCGCTGTAAGTACAATTTCAGGT----------CAACTAAAACGTATTT
AAACTCA-----ATTTTTTTCAAGTTATTAACTTTTTAATTGTT------------------------------------
---------TTTTTTTGCCTCAAAATAGGATTATTTTCTTCAAGCATGGTCCACTGAAGAAGGAAGGATATCAATGAGAA
GGAGAGCACTTATAAGTTTTAGTGGAGCAGGAAGAGCATTGCCTCTACATGAATGTGAACGTGTACGGTCCAAATTTAAC
CCA------A--------CAGTTTACAAGTTTGTCTTAATATTTTTGTTTTTCTTTTTTTTGTACCCTCATAAGCTGTTC
CCAAACTTCGCAGCTGTT-TTTTTTTCATCAGTACATCGCGAGCACTGGATTTTGTTTATCGTTGATATTGTTACAAGAA
AATTCATTTTCCTAGATTCACTTTATGATGGCAAGTCAACCTTTCACATGGAGATAAAAGATTTGATGGTAAGAACAATG
TGTTTGCAAACTATTCTTT---TTTAGTTGTCGTTTTCTTTGATTTTTGGTACTGCAACAAATTAGCCATTTATGTGTTC
TTTAAAATGTCCATTCTTGAACTTTTCATAGATAAACAATTTTATCAAAACATGGGAAGAGTCGAGACTCGGGAGAATGG
GATTCAAAAATTTTGGTATAGAATACCCAAACATGCCTAAGCAAACTGGAAGGTACATTTTCTGCCTTTTTGT-GTGGGA
AACAC-AAAACACATCCAGAGATGCTTTTTCATTTTCATTTTCTA-TCTGTGATCAACGTGTCTTCATGTTCTTTTTAAT
CATTTTCTTT-CTGTAAAAAACACAAC-ACTACTTGCGGGATTTTTGTGGTCAAGTGGATGCAAACTTTTGTTTCACGGA
ATCCTCGCCAGGCCCAACTCAGGATGAAGGACGTTGGAGACGCAAGGATCATATTTACTGTTGATATCTTGTTCAGCGAT
CATAACCCTATTGATGAAGGCAAAAGACTTGTCAAGTACTTTCGTCAATAAAATGATATTTTTACAGCAACAGATTTCTT
CCTCTTTTGTCAAAGCAACAGATTTTATTATCACATACAGAGGAAGGACAATAAGCTAACACACATTTTTATCCTGT---
--CTCTTTTTTTTGTCAGGGAGTTGAGGACAGCATTGATCTACAA-GG----AGGGGTAAAAAGAATGAAGAAC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCAAG-AATACTCTAGATGTTTTAGATGTCTTTTTCTATTTTTTTTGTTCATG-TTTTGTGTTCGCTCGA
GGAGTGATATGGGGAAATCAGCGGATATACCAGAGTAACGCAAATATTTTTTTGTTCATATGAAAAACA-TTTTTTGAGT
G-AGGGTAATGGAAAGTAATTTTTTTGTGTTCTGTGCCAATGCTTTTCTTATTCGAACCTTCTTTTTCTTTTTCTGTTCT
TTTTAAAAGAATACACTATATCATTTTTTGGTC---AACTACTACGCAAAGACAAAAAGTAATGGAGA---AAATACATG
TAAAACCTCTTTTTTTCTGCTTACT-------GAATTCAATCAACATGTCTAACATTTCT---CATTTATCATTCAACAA
ATTTCTAACATTTT-TTTTTCTTTTATGCTCTGTCACTTCTCCTTATTCCCTAGACAGGGGATTTTTTCAAACATGTCTA
CATGAGAGGCGGGTGGGTGAAGAAAGTGCAATGCAAATGAAATTACAAAACACCTCAAGTAGTATTCAAGAAATAATATG
TGCAAAGTATTAAATCCAGGTACAATCATTACCAACCAAAGTTTAA-TTT-TCTCTCGCATTTGTTACAATGAAGTATTT
T-CTCTCGCATTGGGTACATCTTTCTTTTTTTCAAGGTCACCTGCACTGCCTAGGTGTTGCATGTCTTCTTTTTGATTCA
CTTTCTTCAAAAATATTATGCCTGAACTACAATAGTCCTTCAACCTGTGTGGTAGGCGCCTTCCTTCATTGACGATTAGC
TCCATTCTGTTTGCCAGTTGATGAATCAGAAGGACCTGTAGATTTTTTTT-CTTTTTGGCCAGTGACTTGTTTGATTTTT
TC--
>chr1D_48
-----------------------------------------------TTTCTGCTTAGTTACTGAACACGTCCTTTTCAA
CAATTTGTCCTAATTTGCAGAGTTACTCAACAACACCATTTCTCGGCAAGAGGCTTTTTCTAGATGAGTTCATTGAACAA
GATGACCAAGAAGGGACTAAAGATCAATCAATCCCTGTCATTGATGAGTTACAGGTAAATCTGT-TCTCCCCTCTTTT-T
GTGTAGCAATAACTTTCTTTTTGCTTTTTTCTTAATGCAACAACAAACTAACCCTATTTTTATG--TGTGCCC-TTTTTG
TATGTTT-TGTAGTTATCTCCGGACGTTCAAATTCTGGGGGAGAGATTTTT-----------------------------
--------------------------------------------------------------------------------
---------------------------------CAATGGTTCATGCTCTAATATGGTAAACACAGCAGACAATTTGTACA
A-CAGCAACCTAACATTAGGGAGTTACTCAAGTGGTAAGGAAAATCTGCCTCCCAAAAGGATCGTACGCCCAAGCAAGTA
TCTCTACTCACCATTCGATCATGATTTGAGAGGCGCTCTTATGCCACATGAGAAGCAGCTACACAGGAACATTTTGACCC
TAAGCAAAGTTGAACCTCGTAGAAGGTTTTTTTGTACATTCATTTTTTCA--TTTTTACCTCTCTTTCTTTTGTTTGGTC
A---TTTTACTTAAGTCTTTTTCTTTGCTCGCTAT----TTGAATCTTTTTGTGTGTGCTTTTTCTCTAGATAACTACGA
TG---TTTTTTCACCCACATGCAGCTCATGGGTAGTGTTGGTTGATAAAACAAGCCTATCCCTCGGACAACTAGGTGATT
CGTTTGACACCAACAGACATGTGGAAGCTTATGTTTTCAATGTTTTCTGCTAGATGCTCTTTCAAGACAACCATCCAAGG
CAATCAAAGAAGTATTACTTCTTCACTACTATCTCTGTAACTACAAAAAAAAGCAATTCAAACCCAACTAAAACATATTT
CAAGTCA-----TTAATTTTTTT----------------GTAGAACACTTACCGCACTTTTTTAGGTCGAAGTTTGACAA
TTTAATTG--TTTTTTGCCTCAAAACAAGATTATTTACTTGAAGCCTGGTCTATTGAAGAAGGAAGGATGTCAATGAGAA
GGAGAGCACTTATAAGCTTTGACGGAGCATGAAAAGCATTGCCTCTACATCAAACCAAATTTGTACGGTGCAAAATTTAT
TTTAACCTCGCAGGAGAGCATTTTACAAGTTTGTCTTTTCTTTTTCTGATTGC--TTTTTTTACCCCTCACAACCTGTTC
CCATTGCAGTTG-------TTCTTTCCATCAGTACATTGTGAGCACTGGATGTTGTTCATTGTTGATATTGTCGCAAGAA
AATTCATTTTCCTAGATTCAGTTTATGAATGGGAGTCATCATTTCACATGGAGATCAAAGATTTGATGGTAAGAACAATG
TTTTTGCAAACTGTTCTTCA-------TTATCTTTTTCTTTTTTGGGTATTTTTGCAACAAC-TAGCCATTCATGTGTTC
CTAAAAATGTTTGTTCTTCAATTTCTTATAGATAAACAATTTTATCAAAACATGGGAAGAATCTAAACTGAGAAGAATGG
GGTTCAGAAATTTTGGTATAGAATACCCAAATATCCATAAGCAAATTGGAAGGTACATTCTGGT-CTTTCTTT-GTGG-A
AACACAAAAATGCATGTAGAGATGCTTGT---TCATGGTTTTT-------------------------------------
--TTT-ATTTTCTGCAAAAAAACATAGGGATGCTTGCGGGATTTTTGTGCTGAAGTGGACGCAAACTTGGG-TTCGCGGA
ATGCTCTCCAGCCCCAATTCAGGATGAAGGACCTTGTTGATGCAAGGATGAGATTTGTTGTTGATATCTTGTTCAGCCCT
CATAACACTATTGATACAGGCAAAAGACTTGTCAAGAACTTTCGTCAATAAACTAGTA-TTTTACAGCAACAGATTTCTT
CCTCTTTTTTAC-AGCAACAGATTTTCTTATCACATACAGAGGAAGGAAAATAAGCTAACATACATTTTTATTTTCCATC
AGCTCTCTTTTTTCTCAGC-AGTTGAGGACAGCATTGATCTACAA-GGGGG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>SNPs
-----------------------------SSS------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------S-----------------------S-----------------------------------------
-------SS--------------------------------------------------------------S--------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------S-----------------------------------------------------
-----S---------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S----------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------S-----------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S------------------------------------S------------------
--------------------------------------------------------S-----------------------
-------------------------------------------------------------------------------S
-SSS
>forward_954
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CAGTCTATCCCTTGGACAACTCA------
--------------------------------------------------------------------------------
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----
>reverse_3182
--------------------------------------------------------------------------------
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-------------------------------------------------------------TTGTCTTCTTTTCGATTCA
CTTTCT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
