>input_sequence_69189
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------GAGTAAGTAAAGTGAGTAACAGGTTGGACGATGGGAGGGAGCAGCAAGAAACGTGGTATGGAAC------TGCT
CCGGGAGATTACGCCCACGTTTAAAACCAGAGTTACTAGTTGTTCATGGTA-----GCTTTGTCACTGGTTTGCGTTTCA
GGTGGGCAGC---------GCGGCGAGGGCGACGGGGAGAACCCGGCGGCGGAGGGGGGCAGCGCGCTGCCGATGGCCAA
CGTCGTGCGCCTGATGAGGCGGGTGCTGCCGTCCAACGTCAAGATCGCCGAGACCGCGAAGCAGCTCACCCACGACTGCG
CGGTCGAGTTCGTCGGCTTCGTCGGCGGCGAGGCGTCCGAGCGGGCCAGGTCTGAGCACCGCCGCACCGTCGCGCCGGAG
GACTTCACCTGGTCCTGCCAGAGCCTCGGGTTCGACAGCTACGTCCAGCCCATGGAGACCTACCTCCGCGGCTACCGCGA
GTACGACATCGCCCGTGGCAGGAGCAGCCGCGGGGCGCGCCCTCCTGCGCCGCCGGCGACGGCATCGTTCCTGCCGCCTG
GACAGCCAGTGACGGTCACCGAAGAGGAGCTGGAGTTCCTGCGGTCGGTGGTCCCTCCGCCGCCGGAAGGATATTAGCGG
TGCCGGTACGGCTGGCAAACTCGTCGGTCTCAGGCGCAGGCGCAGGCGCATGCGCTGCTATAAATGTACACATAAGGTGT
ACGCCAGGATGTAGCGTTGTTTTGCTTGAAGAAAATCCGCGATGTATCCATAAGGCAATAATAATATCTTTAGAGCTGTC
CC------------------------------------------------------------------------------
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>chr6D_1_TraesCS6D01G268100
ACGGCGACTGCCCTTCAGTCACCCGAGCCGTCAACGACATCCGGGAAGAGGCAAGACTATGGACACGCGCGGGCGCCACA
GGTCTAGCACTCATCATGTCAGAGACGTAGCCTAGGGTCTTTGTGGCTGGCGCACCCACTTCCCTAGTGCGCCACGGCTG
CCATTGCACGCCTTCCATGTGTACAGGCTCGGCAGCCCCTCCCTCTCATCTCATACTTGTATAATTGCTACCTTCTGCCT
ATCAATGCAATGCCTTTTGCGTATTTGCGAAAAAAAAGATGGGTTGTTTAGCCTTAGTGCATTGGCTCGCTGAACCACTA
ATTATGCATCCTCATAGTATATGAATCGATTCATTGCGCATCGATTTCCTAATATGCAAGTTCATGCTCATAGTATAGTA
ATCTGAA-----AAAACTGAATATAAATTGAAATTGAGGCGAGGGAGTCAGATAGTGCGGTTCATGTTCAAAACCTGCGT
AGGAGGACGCACGAGTCAACTACG-AAGTGGACCGACCTCTTAATTTCCAGCCGGCAGCGGACGGAGGACGCCAGCAACG
GGACGCGCCGACGCCCAACGCCTACGTACCCACATCGGCGCGTACCCC-AACCACCCCCGCCTCGTTGACGTACTACGTC
GTCCTCCTCCCTTCAGTTACCACCCAGACAGTAATCGCTTGCTAAAGAT-AAAAGAGATTTGACTGCGAACGCCTGTGCA
GCGCATTGATGTGCTTCCTCGCCGGCGACCCTGCCCGTAGGTGAGAAGCGAACAAAGGAGCACACCGGCGCGGGGGTGCC
GAGTTTAAACCCCGCCG------------GTAACGCCTGCAGGGCTCGCCGGAGCTGCAATGTGGCGGCCTCAACTCGTT
CTCCGCGCGCCACGGCGGCAGCATGCACCTTGGCATGGCAC-------GTCCGTCCAGGCTGGCGCAGCCCAGCCCGCGG
ACGCCTATAAATGCAGGTGCCCAGGCCACAAGCCGCT-----CCCA--------CCACAACG------CACACACACTGA
GTAAGTGAGTAAGTAAAGTGAGTAACAGGTTGGACGATGGGAGGGAGCAGCAAGAAACGTGGTATGGAAC------TGCT
CCGGGAGATTACGCCCACGTTTAAAACCAGAGTTACTAGTTGTTCATGGTA-----GCTTTGTCACTGGTTTGCGTTTCA
GGTGGGCAGC---------GCGGCGAGGGCGACGGGGAGAACCCGGCGGCGGAGGGGGGCAGCGCGCTGCCGATGGCCAA
CGTCGTGCGCCTGATGAGGCGGGTGCTGCCGTCCAACGTCAAGATCGCCGAGACCGCGAAGCAGCTCACCCACGACTGCG
CGGTCGAGTTCGTCGGCTTCGTCGGCGGCGAGGCGTCCGAGCGGGCCAGGTCTGAGCACCGCCGCACCGTCGCGCCGGAG
GACTTCACCTGGTCCTGCCAGAGCCTCGGGTTCGACAGCTACGTCCAGCCCATGGAGACCTACCTCCGCGGCTACCGCGA
GTACGACATCGCCCGTGGCAGGAGCAGCCGCGGGGCGCGCCCTCCTGCGCCGCCGGCGACGGCATCGTTCCTGCCGCCTG
GACAGCCAGTGACGGTCACCGAAGAGGAGCTGGAGTTCCTGCGGTCGGTGGTCCCTCCGCCGCCGGAAGGATATTAGCGG
TGCCGGTACGGCTGGCAAACTCGTCGGTCTCAGGCGCAGGCGCAGGCGCATGCGCTGCTATAAATGTACACATAAGGTGT
ACGCCAGGATGTAGCGTTGTTTTGCTTGAAGAAAATCCGCGATGTATCCATAAGGCAATAATAATATCTTTAGAGCTGTC
CCTGCAGTTTGCGAATGTCTTC-AAAAGATATAATCGACCACCCACGATATATCCATGGAAATATATGCCTGATAAGAAC
TAGAAACAGGGTAAAACTAAATAAACACTATATTTAAAAGTTTCT-AAAAGTTCTTGAAGTATATTTGGGAGGTGATATT
CTACAAACGTGCAAA---------------AAACAAAATCCTTTCATGTA------------------------------
---------------------------AAAAAAATATTAGCTCTAAAAAATATTGTAGTTTGAACCTCAAATTTCAAAAT
TTTATAGAACATGACCTTTCTGCCATATCATAGTTTTTTCGAGAGAATTCTTTCAAAAGCACTAAGATGTGGTTTCTATA
AAATTTTCATTGCAACTTAGTTTTCATCAAATGCTTTCTTCAAATTATAGGAATATCTACAAACGGCAGGTGAGAGAGGA
GAGGATCCTCCCATGGCAACATGTGTCACACGTGATGCAGGGAGCGTTTATTCGTTCATTTATGGTTTTCTATTTTTATT
GTTTTCTTTCGTCATTTTCGCTTAGTTGTGAGTAGATTTTTTTTAGCATCTTATAAAATGAAATTATTTTATTTTATTTT
TTCGCTTAGTTGTCTTTGATGGAGCACGGCCGTTGATTGAGCAACTATTACAAAGAGTGAGATATGAGGGTGTGGTCTGG
TCCTCCGCGGGACTTCTAAAAGGAAATGTAACTTCCTTCTTTAGTAGGGTAGAGAGGTGGGTGAGTGGCGAGGATTAGCA
TGTAATGTAAACCTTGTAACCAATGGTGGAGGCACTCTTTGCATTTCTTCTTTAATACTGTATATGATATGCACACTCGT
GCATATTCGAGAAAAAATGGTTAAATTTTAGGTAAAGTACACATCAATGACAACATGCGTTGTTGCGATTCGCTACCGGT
TGCCGTAGGTCAAAACATTCGAAGGCAGGGCAGGAAGGGTGTGACGACATATGATGGATCACATATTTGGATGAACGCAT
TTTGGTGGAGGTGACGGAACTGAAGCAACGGGTATG
>chr6A_284
TTGATT--------------------------------------------------------------------------
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------------------------------------------------TAGCCTTAGTGCATTGGCTCGCTGAACCACTA
ATCATACATGCTCACAGTATATGAATTGATTCATT-------GATTTCCTAATACGCAAGTTCATGCTCATAGTATAGTA
ATCTGAA-----AAAACGGAATATAAATTGAAATTGAGGCGAGGGGGGCAGATAGTGCGGTTCATGTTCAAAACTTGCGT
AGGAGGACGCACTAGTCAACTACGCAAGCGGTCCGACCTCTTAATTTCCAGGCTGCAGCGGACGGAGGACGCGAGCAACG
GGACGCGCCGACGCCCAACGCCTACGTACCCACATCGGCGCGTACCCCCAACCACCCCCGCCTCGTTGACGTACTACGTC
GTCCTCCTCTCTTCAGTTACCACCCAGACAGTAACCGCTTGCTAAAGATAAAAAGAGATTTGACTGCGAACGCCTGTGCA
GCGCATTGATGTGCTTCCTCGCCGGCGACCCTGCCCGCAGGTGAGAAGCGAACAAAGGAGCACACCGGCGCGGGGGTGTC
GAGTCTAAAGCCCGCCG------------GTAACGCCTGCATGGCTCGCCGGAGCTGCAATGTGGCGGCCTCAACTCGTT
CTCCTCGCGCCACGGCGGCACCATGCACCTTGGAATGGCAC-------GTGCGTCCAGGCTGGCGCAGCCCAGCCCGCGG
ACGCCTATAAATGCAGGTGCCCAGGCCACAAGCCGCTTCCATCCCA--------TCACGACG------CACACACACTGA
GTAAGTGAGTAAGTAAAGTGAGTAACAGGTTGGACGATGGGAGGAAGCAGCAAGAAACGTGGTATGGAAC------TGCT
CCGGGAGATTACGT-CACGTTCAAAACCAGAGTTACTAGCTGTTCATGGTA-----GTTTTGTCACTGGTTTGCGTTTCA
GGTGGGCAGC---------GCGGCGAGGGCGACGCGGAGAACCCGGCGGCGGAGGGGGGCAGCGCGCTGCCGATGGCCAA
CGTCGTGCGCCTGATGAGGCGGGTGCTGCCGTCGAACGTCAAGATCGCCGAGACCGCGAAGCAGCTCACCCACGACTGCG
CGGTCGAGTTCGTCGGCTTCGTCGGCGGCGAGGCGTCCGAGCGGGCCAGGTCGGAGCACCGCCGCACCGTCGCGCCGGAG
GACTTCACCTGGTCCTGCCAGAGCCTCGGGCTCGACAGCTACGTCCAGCCCATGCAGACCTACCTCCAAGGCTACCGCGA
GTACGACATCGCCCGTGGCAGGAGCAGCCGCGGGGCGCGCCCTCCTGCGCCGCCGGCGATAGCATCGTTCCTGCCGCCTG
GACAGCCAGTGACGGTCACCGAAGAGGAGCTGGAGTTCCTGCGGTCGGTGGTCCCTCCGCCGCCGGAAGGATATTAGCGG
TGCCGGTGCGGCTGGCAAACTCGTCGG------------GCGCAGGCGCAGGCGCTGCTATAAATGTACACATAAGGTGT
ACGCCAATATGTAGCGTTGCTTTGCTTGAAGAAAATCC-CGATGTATCCATAAGGCAATAATAATATCTTTAGAGCTGTC
CCTTCAGTGTGCGAATGTCTTCAAAAAGATATAATCGATCACCCACGGTATATCCATAGAAATATATGCCTGATAAGAAC
TAGAAACAAGGCAAAACTAAATATACATTGTATTTAAAAGTTTCTAAAAAGTTCTTGAAGTATATTTGGGAGGTGATATT
CTACAGACATGTGCAAAAACTAAAGTGCACAATCAAAATCCTTTGGGAGGTTTAAGAAAGAAAATCCAAGCAATGAAGAG
TGACAGGCGGTGCATCACTATTAATGTAAAAAAATCTTAGCTCTCAAAGATATTGTAGTTTGAACCTC-AAATTCAAAAT
TTTATAGCACATGACCTTTCTGCCATATCGTATTTTTTCA-AGAGAATTCTTTGGAAAGCACTAAACTGTGGTTTCTATG
AAATTTTCATTGCAACTTAGTTTTCATCAAATACTTTCTTCGG-TTATAGGAATGTCTATGAACGATAGGTGAGA-----
GAGGATCCTCCCATGGCGACATGTGTCACACGTGATGCAGTGGGCGTTTATTCGTTTATTTATGGTTTTCTATTTTTATT
GTTTTCTTTCGTCTTTTCCGCTTAGTTGTGAGTAGATTTTTTTTAGCATCTTATAAAATGAAATCAAATTATTCTATTTT
C-------------------------------------------------------------------------------
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-------------AAAATGGTTAAATTTTAGGTAAAGTACACATCAATGACAACATGTGTTGTTGCGATTCGCTGCCGAT
TGGAGTAGGTCAAAACATTCGAGGGCAAGGCAGGGAGGGTGTGACGACATATGATGGATCACATATTTGGATGAACGCAT
TTTGGTGGACGTGACGGAACTGAAGCAACGGGTATG
>chr6B_371
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--------------------------------------------------AATACGCAAGTTCATGCTCATAGTATAGTA
ATCTGAAGAAAAAAAACTGAATAGAAATTGAAATTGAGGCGAGGGAGTCAGATAGTGCGGTTCATGTTCAAAACTTGCGT
AGGAGGACGCACAAGTCAACTCCGCAAGCGGTCTGACCTCTTAATTTCCAGGCGGCAGCGGACGGAGGACGCGAGCAACG
GGACGCGGCGACGCCCAACGCCTACGTACCCACATCGGCGCGTACCC--AACCACCCCCGCCTCGTTGACGTACTACGTC
GTCCTCCTCTCTTCAGTTACCACCCAGACAGTAATCGCTTGCTAAAGAT-AAGAGAGATTTGACTGCGAACGCCTGCGCA
GCGCATTGATGTGCTTCCTCGCCGGCGACCCTGCCCGTAGGTGAGAAACGAACAAAGCCCG-------------------
---------------------------CCGGTACGCCTGCATGGCTCGCCGGAGCTGCAATGTGGCGGCCTCAACTCGTT
CTCCGCGCGCCACGGCGGCACCATGCACCTTGGCATGGCAC-------GTCCGTCCAGGCTGGCGCAGCCCAGCCCGCGG
ACGCCTATAAATGCAGGTGCCCAGGCCACAAGCCGCT-----CCCA--------CCACAACG------CGCACACACTGA
ATAAGTGAGTAAGTAAAGTGAGTAACAGATTAGACGATGGGAGGGAGCAGCAAGAAACGTGGTATGGAGC------TGCT
CCGGGAGATTACGCCCACGTTTAAAACAAGAGTTACTAGTTGTTCATGGTA-----GTTTTGTCACTGGTTTGCATTTCA
GGTGGGCAGC---------GCGGCGAGGGCGACGCGGAGAACCCGGCGGCGGAGGGGGGCAGCGCGCTGCCGATGGCCAA
CGTCGTGCGCCTGATGAGGCGGGTGCTGCCGTCGAACGTCAAGATCGCCGAGACTGCGAAGCAGCTCACCCACGACTGCG
CGGTCGAGTTCGTCGGCTTCGTCGGCGGCGAGGCGTCCGAGCGGGCCAGGTCGGAGCACCGCCGCACCGTCGCGCCGGAG
GACTTCACCTGGTCCTGCCAGAACCTCGGGTTCGACAGCTACGTCCAGCCCATGGAGACCTACCTCCGCGGCTACCGCGA
GTACGACATCGCCCGTGGCAGGAGCAGCCGCGGGGCGCGCCCTCCTGCGCCGCCGGCGATGGCATCGTTCCTACCGCCTG
GACAGCCAGTGACGGTCACCGAAGAGGAGCTGGAGTTCCTGCGGTCGGTGGTCCCTCCGCCGCCGGAAGGATATTAGCGG
TGCCGGTGCGGCTGGCAGACTCGTCGGCCACAGGA------GCAGGCGCAGGCGCTGCTATAAATGTACACATAAGGTGT
ACGCCAATATGTAGCGTTGTTTTGCTTGAAGAAAATCCG-GATGTATCCATAAGGCAATAATAATATCTTTAGAGCTGTC
CCTGCAGTGTCCGGATGT-------------------ATCACCCACGATATATCCATAGAAATATATGCCTGATAAGAAG
TAGAAACAGGGCAAAAC-AAATAAACACTATAATTAAAAGTTTCT-AAAAGTTCTTGAAGTATATTTGGGAGGTGATATT
CTACAAACATCCAAA---------------AA------------------------------------------------
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>chr6D_751
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--------------------------------------AGGTGAGAAGCGAACAAAGGAGCACACCGGTGCGAGGGTATC
GACTTTAAAGCCGGCCCCTGCCCTGCCCCGTAACGCATGCATGGCTCGCGGGAACTGCAATGTGGCAGCCTCACCTCGTT
CTCTGCGCGACACGGCGGTACCATGCACCTTGGCATGGCACCGTGGACGTGCGTCCAGACTGGCGCAGCCCAGCCCGCGG
ACACCTATAAATG--GGTGCCCAGGCCACAAGCCGCT-----CTCA--------TCACAAGTTCACAACGCACACACTGA
GTAAGTGTGTAAGTAA-----GTGACAGATTGAACAATGGGAGGGCGCGGCAAGAAGCGTGGTATGGAACAGGGAGTGCT
CCCCGAGATTACGCATAGTTTTAC---------TAGTAGTTGTTCATGGCGGTTCTGATTTGTTTCTGGTTTTGGTTTCA
GGTGGTGCGAAGGGGGCCGGCCGTGAGGGCAACGGGGAGAAGCCGGCGTCGGACGGGAGCAGCGCGGTGCCGACGGCCAA
CGTCGTGCCCGTGACAAGGCGGGTGCAGCCGTCGAACGTCAAGATCGCCGAGTCCGCGAAGCAGCTCACCCACGACTGCG
CGGCCGAGTTCGT-------------------------------------------------------------------
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>chr6A_751
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--------------------------------------AGGTGACAAGCGAACAAAGGAGCACACCGGTGCGAGGGTATC
GACTTTAAAGCCGGCCCCTGCCCTGCCCCGTAACGCATGCATGGCTCGCGGGAACTGCAATGTGGCAGCCTCACCTCGTT
CTCCGCGCGACACGGCGGTACCATGCACCTTGGCATGGCACCGTGGACGTGCGTCCAGACTGGCGCAGCCCAGCCCGCGG
ACACCTATAAATG--GGTGCCCAGGCCACAAGCCGTT-----CTCATCACAAGTTCACAACG------CACACACATTGA
GTAAGTGTGTAAGTAA-----GTGACAGATTGAACAATGGGAGGGCGCGGCAAGAAGCGTGGTATGGAACAGGGAGCGCC
CCCCTCGATTACGCATAGTTTTAC---------TAGTAGTTGTTCATGGCGGTTCTGATTTGTTTCTGGTTTTGGTTTCA
GGTGCTGCGAAGGAGGCCGGCCGTGAGGGCAACGGGGAGAAGCCGGCGTCCGACGGGGGCAGCGCGCTGCCGACGGCCAA
CGTCGTGCCCCCGACGAGGCGGGTGCCGCCGTCGAACGTCAAGATCGCCGAGTCCGCGAAGCAGCTCACCCACGACTGCG
CGGCCGAGTTCGT-------------------------------------------------------------------
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>chr6B_810
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-----------------------------GTAACGCATGCATGGCTCGCGGGAACTGCAATGTGGCAGCCTCACCTCGTT
CTCCGCGCGACACGGCGGTACCAGGCACCTTGGCATGGCACCGTGGACGTGCGTCCAGACTGGCGCAGCCCAGCCCGCGG
ACACCTATAAATG--GGTGCCCTGGCCACAAGCCACA-----CTCATCACAAGTTCACAACG------CACACACTAAGT
GTGT---AGTAAGTAA-----GTGACAGATTGAACAATGGGAGGGCGCGGCAAGAAGCGTGGTATGGAACAGGGAGTGCT
CCCCGAGATTACGCATAGTTTTAC---------TAGTAGTTGTTCATGGCGGTTCTGATTTGTTTCTGGTTTTGATTTCA
GGCGGTGCGAAGGGGGCTGGCCGTGAGGGCAACGGGGAGAAGCCGGCGTCGGACGGGAGCAGCGCGTTGCCGACGGCCAA
CGTCGTGCCCCCGACGAGGCAGGTGCTCCCGTCGAACGTCAAGATCGCCGAGTCCGCGAAGCAGCTCACCCACGACTGCG
CGGCCGAGTTCGT-------------------------------------------------------------------
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>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------
--S--S---S----S-----------S--------SSSSSSS------------S-------------------------
--------------------------------------------------------------------------S-----
------------S---------------S--S-------------------S--------------------S-------
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---------S----------------------------------------------------------------------
------------------------------------------------------------------------------S-
---------S-------------------------------S--------------------------------------
--------------------S-----------------------------------------------------------
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---------------------------------------------------------S----------------------
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---------------------------------S----------------------------------------------
----------------------------------------------------S---------------------------
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-----------------------------------------------------------S--------------------
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-------S-------------------S-S----SSSSS-----------S-----------------------------
------SS------------------------------------------------------------------------
--------S-----------------------------S------------------S----------------------
-----------S--------------------------------------------------------------------
--------S-----------------------S-----------SSSSSS------------------------------
-----------------------------------S--------S---S-------------------S--S--------
-------S---------------------S--S-----SSS------------SS----------SS------------S
--------------------------------S--------SSS----------S----SS----SS--------SSSSS
-----------------S----------------------S-S-------------S-----------------------
-------------S---S----------------------------------------------S-SS-----S------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS--------------------------------------------S----------------S---S-
--SS------------------S----S------S---------------------------------------------
---------S--------------------------
>forward_130
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------------------------------CCTAGGGTCTTTGTGGCTGG------------------------------
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>reverse_2306
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-----------------------------------------------------------------GCAGGTGAGAGAGGA
GAGGA---------------------------------------------------------------------------
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