>input_sequence_69131
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------CTATATATAACTGCGCTGCGGCCGCCTCCTTCC-----------------------
-------------------------------------CACAGACCATCAACACAAACGAGCATCAATCGGAATTCACAGG
CGGC--TCCAGCAGATCATTTACACGAGCAGCAGCAAATCCA------TCCATGGGAGCGGGAATGAAGCGCGCTAGGGA
GCAGGAGGTAC---TGTCGCTCGCGCTGTCGCTGAGCACGGACTCGACGTCG---TCG------------TCAGCCGACT
CGGCCGGTGCACCGG---------------C------------CAGGAAGAGGGCGCGGCGGGGTAGA------GTGGTG
GCGACGTCGGGGGAAGGGGAGTTCGTGTGCAAGACGTGCGGCCGCGCCTTCGCGTCGTTCCAGGCGCTGGGCGGCCACCG
GACCAGCCACCTCCGGGGGCGCCATGGGCTGGAGCTCGGTGTCGGGATCGCCAGGGCCATCAAGGAGAGGCAAAAGCAGG
AGGACAAGCAGCAGCACGATTGCCACATCTGCGGGCTCGGCTTCGGGACCGGCCAGGCTCTCGGCGGCCACATGCGTCGG
CACCGCGAGGAGATGG---------CGCTCAGCGGCGCCATC------------GACCGGTGGGTCGCTCTGTCGA----
--ATCAGGAGGCGGGGCACCAGGCCGCCGCCG---ACCG---GCCGCCGGTCTTGCTCGAGCTGTTCGTCTAGAGTCGTT
AGAATCTGATAGG-----------------TTCATTGTTCGACCTTGTA--------CAGAGTACATTTTTGGTGATTAC
CGTCTCCGTTCTTGCTGGATAGTA-TTTGCTTTGGATCGGTCCCTTTTCTAACCGATTGACTCGAGGTTTA--CATGCAC
AGATGCAGTTGTATACTCCC-------TA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr5B_1_TraesCS5B01G491000
AGCACCACCAAGCCCTCTCCCCCTCGGCCAGAAAAAATAGAGCAGTGTGCTCTGCTCTTGCGCGAGGGGCTATATATAGG
CAGCACCATTAGACCCGGTTGGTGGCATGAACCGGGACAAAAGGGAACCCTTTGGTCCCGGTTCATGCCACCAACCGGGA
CCAATAGTGGTGGGCCAGGAGCCAGGACCATTGGTCCCGGTTCATCCCACCAACCGGGACCAAAAGGTCCGGACGAACTG
GGACCAATGACCCACGTGGCCCGGCCGGCCCCCTGGGCTCACGAACCGGGGCAAATAGCTCCATTGGTTCCGGTTCTGGA
TTGAACCGGGACTAATGGGCTGAACTGGCCTGGGCCATTGCCCCCTTTTCTACCAGTGATGGTAGACACTTAATTAGGCC
TCTCTCCTGTAGAAATAGGCAATGGTGCTTCAGAAAACCGGATTTATTTTTTTAAACACCTACCTAAGCATTTAGCAGTG
TACTAGGCCTTAGGGGTTGCGACAATTAATTCACATCGGAGAGAGGACCAAACTTTTCTTTA-GAGACCGAAACGAACCA
TACTCTTTTTTCTTTCTGCCAATTCAAAAGGTACCAAACTTGTATACGAACACCAGTGTAGCAAGTAGTACGTGGTGTGT
TCTTAAAAAAATAGTTGCA---TGTATGTGTGGCGTAGACAAATCTGAATTATCCTGTGCGATCCAAATATCCTTTCAGA
GTCTAGAACGTTCCA----------GTGTCACGCTCCCGCGCCGTCCAACTCGAGAGCCAAGCAGCGGCGCGCCGCCACG
CGCCTTGTGGCGTGACAGGTGACGCCACTCCGCACCACAGGTTCGTCTCCGGTCGGCC-GCGCTACGTAC----------
----GACCACAAATATCCC-ATCGAGCTCGATCCGATCCGTCACGTCGCGAAGGTCGCGGTGGCATCCAGCGATTGGTCC
ACACAA----------------------------------GCACAAACGTAAGCTCCGCCCGCAGCAACACGCACTCCAC
TCCACCACCTACTGCGCACACGACCTATATATAACTGCGCTGCGGCCGCCTCCTTCC-----------------------
-------------------------------------CACAGACCATCAACACAAACGAGCATCAATCGGAATTCACAGG
CGGC--TCCAGCAGATCATTTACACGAGCAGCAGCAAATCCA------TCCATGGGAGCGGGAATGAAGCGCGCTAGGGA
GCAGGAGGTAC---TGTCGCTCGCGCTGTCGCTGAGCACGGACTCGACGTCG---TCG------------TCAGCCGACT
CGGCCGGTGCACCGG---------------C------------CAGGAAGAGGGCGCGGCGGGGTAGA------GTGGTG
GCGACGTCGGGGGAAGGGGAGTTCGTGTGCAAGACGTGCGGCCGCGCCTTCGCGTCGTTCCAGGCGCTGGGCGGCCACCG
GACCAGCCACCTCCGGGGGCGCCATGGGCTGGAGCTCGGTGTCGGGATCGCCAGGGCCATCAAGGAGAGGCAAAAGCAGG
AGGACAAGCAGCAGCACGATTGCCACATCTGCGGGCTCGGCTTCGGGACCGGCCAGGCTCTCGGCGGCCACATGCGTCGG
CACCGCGAGGAGATGG---------CGCTCAGCGGCGCCATC------------GACCGGTGGGTCGCTCTGTCGA----
--ATCAGGAGGCGGGGCACCAGGCCGCCGCCG---ACCG---GCCGCCGGTCTTGCTCGAGCTGTTCGTCTAGAGTCGTT
AGAATCTGATAGG-----------------TTCATTGTTCGACCTTGTA--------CAGAGTACATTTTTGGTGATTAC
CGTCTCCGTTCTTGCTGGATAGTA-TTTGCTTTGGATCGGTCCCTTTTCTAACCGATTGACTCGAGGTTTA--CATGCAC
AGATGCAGTTGTATACTCCC-------TAATGAAGACATATTCATTTCTTCTAAA-GCAATTGACAGATTATTGCACTCA
GATTGTTGTTCTATGAACATGCTGTTTTTCACCGCCATTATTTATAATAAGTCAAGTACTAAGCCTCAGAGCATCTACCG
TCGGACTTGGCAAACCCGGCCCCTCCAACGCACGCGGACGCGCCCGGGCGCATCCACTTTGCATCCACCTCTTTCATATT
TCATCCCCTAAATCCATACAAAGCATGCAAAAAAAACCATACGTACTACCTTAGCTCCTCTTTGTCGTCGGAGATGTATA
GGACGACGGTGCCGGGCGCCGGCTGGACGGGCGGGTAGGAGGGCTCCGGCTCATCCTCCTCCTGCTCGACCTCATCCATG
TAAGCGAGCATCACAGCCTCGTCCGCGGTCTCTTGTGTCTCCATCTCCTGCCGGCGACGGCGTCTTTCCTCCGCAGCCGA
CTCCGACCGGATGGAATTGAGGACGGCCTGCTGCTCCGCCTGCAAATCCCCATCGCCAGCATCCCCCACATCCTTCTCCT
GCAAATCATTGTTGGGAAACGTAGTAATAATTCAAAATTTTCCTACGTGTCACCAAAATCAATCTAGGAGATGCTAGCAA
CGAGAGAGAGAGAGGGAGTGCATCATCATACCCTTGAAGATCGCTCAACGGAAGCGTTAAAAGAACGCGGTTGATGGAGT
CGTACTCGCGGCGATTTAAATCGCGAAAGATCCGATCTAGCGCCGAACGCACGGCGCCTCCGCGTTCAACGCACGTACAT
TCCGGGGACGTCTCCTCATTCTTGATCCAGCAAGGGGAGAGGAGAAGTTGAGGGAGAGCTCCGGCAGCACGACGTCGTGG
TGGTGGAGCTTGTGGTTCTCCTATAGGGCTTCACCAAGCACTACGGAGGAGGAGGACACTACTAGGGAAAAGCCTATACA
CAGAATCTTACCAGCAGCGCTCTTCAAAATACCACGCTACTGCTACTTAGCAGCAGCGCGTGTGACCGAA
>chr5B_491
TAGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGTTGCGACAATTAATTCAGATCGGAGAGAGTACCAAACTTTTCTGTAGGAGATCAAAACGTACCA
AACACTTTTTTCTTTCTGTGAATTCAAAAGGTACCAAACTTGTATACGAAGACCAGCGTGGC-GGTCGTACGTGGCGTGA
CCTTAAA------------------ACGTGTGGCGTAGAAAAATCTGAATGATGTTGTACGATCCAAATATCCTTTCGGA
CTCTAGAACGTTCTAGACCCTTCCGGTGTCACACTCACGCGCCGTCCAACTCCAGAGCCAAGCAGAGGCGCGCCGCGACG
CGCCTTGTGGCGTGACAGGTGACGCCACTCGGCACCACACGTTCCCCTCCGGTCGGCCCGCGCTACGTAC----------
----GACCACAAATATCCC-ATCGAGCTCGATCCCATCCGTCACGTCTCGAAGGTCGCGGTGGCATCCAGCGATTGGTCC
ACACAA----------------------------------GCACAAACGTAAGCTCCGCCCGCAGCAACACGCACTCCAC
TCCACCACCTACTGCGCACACGACCTATATATAA---------------CTGCTTCC-----------------------
-------------------------------------CACAGACCATCAACACAAAAGAGCATCCATCGAAATCCACACG
CGGC--TCCAGCAGATCATTTACACGAGCAGC---AAATCCA------TCCATGGGGGCGGGAATGAGGCGCGCGAGGGA
GAAGGAGGTAT---TGTTGCTCGCGCTTTCGCTGAGCACGGACTCCTCGACG---TCGTCTTCCACGACGTCGGCCGACT
CGGCCAGTGCGCCGG---------------C------------CATGAAAAGGACGCGGCGGGGAAGA------GTGGTG
GCGACGTCGGGAGAAGGGGAGTTCGTGTGCAGGACGTGCGGCCGCGCCTTCACGACGTTCCAGGCGCTCGGGGGCCACCG
GACCAGCCACCTCCGGGGGCGCCACGGGCTGGAGCTCGGCGTCGGTGTCGCCAGGGCCATCAAGAAGCGGTAGCGGCAGG
AGGACAAGCAGCAGCACGATTGCAACATCTGTGGGCTGGGCTTCGAGACGGGGCAGGCGCTCGGCGGCCACATGCGTCGG
CTCCGCGAGGATATGG---------CGC------------TCAGCGGCGCCATCCACCGGTGGGTCGCTCTGTCGG----
--ATCAGGAGGCGACGCACCAGGCCGCCTTCG---ACCG---GCCGCCGGTCTTGCTCCAGCTATTCGTGTAGACTCTTT
AGAATCAGATAGG-----------------ATCAGTGTTCGATCTTGTA--------CAGACTGCATTTTTGGTGGTTAG
CGTTTCTGTTCTTGCTGGATA--A-TCTGCTTTGGATCGGTCCTTTTTTTAACCGATTTAATGGAGATTTA--CATGCAC
AGATGCACTTGTATTATTGTATACATATAAGCAAGACAAATTCATTTGTTCTAAATGCAATTGATAGAATCTTGCACTCA
GATTGCTGTTCTATGACTATGCTATTGCTCAATGCCGTTGTTTAT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr5A_540
TTAGAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GAACTAAACGTACCA
AACTCTTTTTCGTTTCTGCGAATTCAAAATGTACCAAACTTGTATACGAACACCAGTGTTGC-AGTAGTACGTGGTGTGA
TCTTAAAAAAGTACTAGTTGTGTGTACGTGTGGCGTAGACAAATCTGAATGATCCTGTACGATCCAAAGATCCTCTCAGA
TTCTAGAACGTTCCAGACCCTTCCGTTGTCACTCTCACGCGCCGTCCAAGTCC-GAGCCAAGCAGAGGCGCGCCGCCACG
CGCCTTGTGGCGTGACAGGTGGCGCCACTCCGCACCACACGTTCGCCGCCGGTCGA-CCGCGCTACGTAC----------
----GACCACAAATATCCCCATCGAACTCGATCCCATGCGTCACGTCGCGAATGTCGCGGTGGCATCGAGGGATTGGTCC
ACACAA----------------------------------GCACAAACGTAAGCTCCGCCCGCAGCAACACGCACTCCAC
-----CACCTACTGCCCACACAGCCTATATATATAA---CTGCGGCCGCCTCCTTCC-----------------------
-------------------------------------CACAGACCAACAACACAAACGAGCATCAATCCAAATCCACAGG
CGGC--TCCAGCAGATCATTTATACGAGCAGC---AAATCCA------TCCATGGGGGCGGGAATGAAGCACGCGAGGGA
GGAGGAGGTAC---TGTCGCTGGCGCTGGCGCTGAGGACGGACTCCTCGACG---TCG------------TCGGCCGACT
CGGCCGGTGCGCCGG---------------C------------CAGGAAGAGGGCGCGGCGGGGAAGA------GTGGTG
GCCACGTCGGGGGAAGGGGAGTTCGTGTGCAAGACGTGCGGCCGCGCCTTTACGACGTTCCAGGCGCTCGGCGGCCACCG
GACCAGCCACCTCCGGGGGCGCCACGGGCTGGAGCTCGGCGTCGGGGTCGCCAGGGCCATCAAGGAGCGGCAAAGGCAGG
AGGACAAGCAGCAGCACGATTGCCACATCTGCGGGCTGGGCTTCGAGACCGGCCAGGCGCTCGGAGGCCACATGCGCCGG
CACCGCAAGGAGATGG---------CGC------------TCAGCGGCGCCATCGACCGGTGGGTCGCTCTGTCGG----
--AGCAGGAGACTGGGCACCAGGCCGCCGCCC---ACCG---GCCGCCGGTCTTGCTCGAGCTGTTCGTCTAGGGTCTTT
AGAATCAGATAGG-----------------TTCATCGTTCGACCTTGTA--------CAGAGTGTATTTTTGGTGATTAG
CGTTTCTGTTCTTGCTGGATA--AATCTGCTTTGGATCGGTCCCTTTGTTAACCGATTGACTGGAGATTTA--CATGCAC
AGATGTGCTTGTATTATTGTGTACATA--ATCAAGGCAAATTCATTTGTTCGAAATGCAATTGACAGATTCTTGCACTCG
GATTGTTGTTCTATGACTATGCTGTTGTTCAGCTCCATTGTTTATCATAATTTCAAG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr5A_769
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CAGCTGCGCGCCGCCACG
CGCCTTGTGGCGTGACATCTGACGCCACTCCGCACCACACGTTCGGCG-----------GCGCTACGCACGACCGAAATA
TCCGG------------------GAGCTCGATCCTATCCGTCACGTCGCGAACGTCAAGGTGGCTTCGAACGATTGGTCC
ACAGACGCCAGAGGTAGGG----CAGCCCCCACCAGCTCGGCACACACGTAAGCTCCATCCGCAGCAACACGCACGCCAC
C------------------------TATATATAA---------------GTGGACCGTCTGTCCGTCTCCCCTGCCGACC
CATCCATCCATTCTTCCTTCTCCAGACACAACTCCG--------CAGCAGCACAAAAGAGCTTCGATCCACATCTACGCC
GATCCATCCATCAGATCATTAAGACGAGCAGC---AA----A------TCCATGGGAGCGGGGATGAAGCGCGCGAGGGA
GGAGGAGCCAGCTGTGTCGCTGGCGCTCTCTCTCAGCACAGACTCCTCGACG---TCCA---CCACCACCTCGGCCGACT
CGACCGGTGCGCCGG---------------CGAAGGCGGCCGCAAGGAAGAGGGCACGGCGGGGGAGG------GTGGTG
GCCACTTCGGGGGAGGGAGAGTTCGTCTGCAAGACTTGCGGCCGGGCCTTCGAGACGTTCCAGGGGCTGGGCGGGCACCG
GACCAGCCACCTCCGTGGCCGCCACGGGCTGGAGCTCGGCGTAGGCGTCGCCAGGGCCATCACGGAGCAGAAAAGGCAAG
AGGAAAAGCAGCAGCACGACTGGCACATCTGCGGGCTGGGCTTCGAGACGGGCCAGGCGCTCGGCGGCCACATGCGGCGG
CACCGCGAGGAGATGG---------CGC------------TC------------GACCGGTGGGTCGCGCTGTCGA----
--ATCAGGAGGCGGGGCACCAGGCCCCCGCCG---ACCG---GCTACCGGTCTTGCTTGAGCTGTTCGTCTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr5D_778
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------GCGGCCACG
CGCGTCGTGGCGTGACAGGTGACGCCACTCCGCACCACACGTTCGCCGCCGGTCGA-CCGCGCTACGTAC----------
----G------------------GAGCTCGATCCAATCCATCACGTCGCGAACGTCGCGGTGGCTTCCGACGATTCGTCC
GCAGGCGCCAGAGGACGGCCAGCCAGCCCCCACCAAGTTGGCACACACGTATGCTCCCCCGGAAGCACCAAGCACGCCAC
CGT-----CTCCTGCCCACACAACCTATATATAA---------------CCGCGGCCGCCCATGAGAG------------
CATCCATCCATTCTTCCTCCTAGCACCGAGTTCTCATCACAGACCAACGGCACAACAGAGCATCGATCGAATTACAGAT-
------TACAGCGGATCGTTAAGATAAGCAGC---AA----A------TCCATGGGAGCGGGCATGAAGCGCGCGAGGGA
GGAGGCGCCATTTGTGTCCCTCGCGCTGTCGCTCAGCTCAGATTCCTCGACG---TCCA---CCACCACCTCGGCGGACT
CGGCCAGTGCGCTGG---------------CG---GCGGACGCCGGGAAAAGGACGCGGCGGGGGAGA------GCTGTG
GCCACGTCCGGGGAGGGCGAGTTCGTGTGCAAGACGTGCGGCCGGGCCTTCGAGACGTTCCAGGCGCTGGGCGGGCACCG
GACCAGCCACCTCCGGGGCCGCCATGGGCTCGAGCTCGGCGTCGGCGTCGCCAGGGCGATCAAGGAGCGGAAGCGGCAGG
AGGACA---AGCAGCACGACTGCCACATCTGCGGGCTCGGCTTCGAGACGGGCCAGGCGCTCGGGGGCCACATGCGCCGG
CACAGGGAGGAGATGGAGGAGATGGCAC------------TCAGCGGCGCCATCTATCGGTGGGTCGCTCTGTCGG----
--ATCAGGAGGCGGGGCACCAGGCCGCCGCGG---ACCG---GCCGCCCGTCTTGCTCCAGCTCTTCGTCTAGAGTCTTT
AGAATCAGATAGT-----------------TTCATTGTTCGACCTTTTAGGCTTGTACAGAGTACAATTTTGGTGGTTAG
CGTTTTTGTTCTTGCTGGATA----TTTGCATTGGATGGGTCCCTTTTTTAACCGATTGACTGGAGATTTTTGCATGCAC
AAATGCAGCTGC--------ATACATA--ATGAAGAGAAATTCATTTCTTATAAATGCAATTGAC--ATTCTTGCACTCA
GATTGTTGTTCTATGACTATGCTGTTGTTCACCGACATTGTTTATGATAAATCCCGTACGGAGCCTCAG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr5A_1081
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TCCAGCAGATCATTAAGAGGAGCAGC---AA----ATCCATCTCCATGGGAGCGGGGATGAAGCGCGCGAGGGA
GGAGCAGCCAATTGTGTCGCTGGCGCTCTCCCTCAGCACAGACTCTTCGACGACGTCCG---CCACCACGTCGGGCAACT
CGCTCGGTTCGCCGC---------------CG---CCGGCGGCAAGGAAGAGGGCGCGGCGGGGAAGA------GTGGTG
GCCACGTCAGGGGAAGGGGACTTCGTCTGCAAGACTTGCGGGCGCGCCTTCGAGACGTTCCAGGCCCTGGGTGGGCACCG
GACCAGCCACCTCCGGGGCCGCCACGGGCTGGAGCTCGGCGTCGGCGTCGCCATGGCCATCAAGGAGCGGAAGAGGCAAG
AGGACAAGCAGCAGCACGACTGCCACATCTGCGGGCTGGGCTTCGAGACGGGCCAGGCGCTCGGCGGCCACATGCGGCGG
CACCGCGAGGATATGG---------CGC------------TC------------GACCGGTGGGTCGCGCTGTCGG----
--ATCAGGAGGCGGGGCACCAGGCCGCCGCCG---GCAG---GCTGCCTGTCTTGCTCGAGCTGTTCGTCTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr5D_1081
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TCCAGCAGATCATCAAGAGGAGCAGC---AA----ATTCAGCTCCATGGGAGCAGGGATGAAGCACGCGAGGGA
GGAGGAGCCGATTGTTTCGCTGGCGCTGTCCCTCAGCACGGACTCCTCAGCG---TCGA---CCACGACGTCGGACAGCT
CGACCGGTGCGCCGG---------------CG---GCAAA------GAAGAGGGTGCGACGGGGGAGG------GTGGTG
GTGACGTCGGGGCAAGGGGAGTTCGTGTGCAAGACATGCGGCCGCGCCTTTGAGACGTTCCAGGCGCTGGGCGGCCACCG
GACCAGCCACCTCCGCGGTCGCCACGGGCTGGAGCTCGGCGTCTGCGTCGCCAGGGCCATCGGGGAGCGGCAAAGGCACG
ACGACAAGCAGCAACACGACTGCCACATCTGCACACTGGGCTTCGAGACGGGCCAGGCGCTCGGCGGGCACATGCGGCGG
CACCGCGAGGAGATGG---------CGC------------TC------------GACCGGTGGGTCGCGCTGTCGG----
--ATCAGGAGGCGGGGCACCAGGCCGCCGCCGCCTACCG---GCTGCCTGTCTTGCTCGAGTTGTTCGTTTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chrUn_1081
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TCCAGCAGATCATCAAGAGGAGCAGC---AA----ATCCATCTCCATGGGAGCAGGGATGAAGCGCGCGAGGGA
GGAGGAGCCAACCGTCTCGCTGGCGCTGTCCCTCAGCACAGACTCCTCGGCG---TCGA---CCACGACGTCGGACGACT
CGGGCACCGGTGCGCCTACGCCGGCGGCGCC------------CGGGAAGAGGACAAGGCGGAGGAGA------GTAGTG
GCGACGTCAGGGGAAGGGGACTTCGTCTGCAAGACTTGCGGCCGGGCCTTCGAGACGTTCCAGGCGCTGGGCGGCCACCG
GACCAGCCACCTCCGCGGCCGCCACGGGCTGGAGCTCGGCGTCGGCGTTGCCAGGGCCATCAAGGAGCGGCAAAGGCGCG
AGGACAGGCAGCAGCACGACTGCCACATCTGCGGGCTGGGCTTCGAGACGGGCCAGGCGCTCGGCGGCCACATGCGTCGG
CACCGCGAGGAGATGG---------CGC------------TC------------GACCGGTGGGTCGCGCTGTCGG----
--ATCAGGAGGCGGGGCACCAGGCCGCCGCCG---ACCG---GCTGCCTGTCTTGCTCGAGCTGTTCGTCTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr5D_1116
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------A------TCCATGGGAGAGGGGATGAAGCGCGCAAGGGA
GAAGGAGCCAGCAGCGTCGCTGGCGCTGTCTCTCATCACAGACTCATCGACG---TCCA---CCACAACCTCGGCCGACT
CGGCCGGTGCGCCGG---------------CG---GCAGCGCCCAGGAAGAGGGCACGGCGAGGGAGG------GTAGTG
GCCACTTCGGGGGAGGGAGAGTTCGTCTGCAAGACTTGCGGGCGCGCCTTCGAGACGTTCCAGGCGCTCGGCGGCCACCG
GACCAGCCACCTCCGCGGCCGCTGCGGGCTGGAGCTCGGCGTCGGCGTCGCCAGGGCCATCGGGGAGCGGCAAAGGCACG
ACGACAAGCAGCAGCACGACTGCCAGATCTGCACACTGGGCTTCGAGACAGGCCAGGCGCTCGGCGGGCACATGCGGCGG
CACCGCGAGGAGATGG---------CGC------------TC------------GACCGGTGGGTCGCGCTGTCGG----
--ATCAGGAGGCGGGGCACCAGGCCGCCGCCG---ACCG---GCTGCCTGTTTTGCTCGAGCTGTTCGTCTAGCCTGCTA
GCTGGATCTCAATGCTTGTTAGTTCAGGACTTGTTTGTTCAACGTCGTA--------TAGAGTACGTATTTGCTGATTAG
CGTTCCCGTTCGTGCTGGATA----TTTGCTTTGGATCGGTCCATTTTCTAACCGATTGACTGAAGGTTTA--CATGCAC
----------------TTGTATACATA--ATGAAGACACATTCGTTTGTTCCAAATGCTATTGACAGATTCTTGCATCCA
GATTGTTTTTCTATGAA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr5D_1116
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------A------TCCATGGGAGCTGGGATGAAGCGCGCGAGGGA
GGAGGAACCAACCGTGCCGCTGGCGCTGTCCCTCAGCACGGACTCGGCGTCT---TCCG---CCGTGACGTCGGCGGACT
CGGGCGCCGCTGGGCC------------------------------------GGCCAAGCGCAGGAGGGGCGTCGTGGTG
GCGACGTCGGGGGAGGGGGAGTTCGTGTGCAAGACGTGCGGCCGGGCCTTCGCGACGTTCCAGGCGCTGGGCGGGCACCG
GACCAGCCACCTCCGCGGCCGCCACGGGCTGGAGCTCGGTGTCGGCGTCGCCAGGGCAATCAAGGAACGGAAAAAGCGCG
AGGAGA---AACAACACCAGTGTCACATCTGCGGGCTGGGCTTCGAGATGGGACAGGCGCTCGGGGGGCACATGAGGCGG
CACCGCGAGGAGATGG---------CAC------------CACGCCGCGCCGACGATCGCTGGGTCGCGCTGCTGCCGGA
TCAGGAGGTGGCGGGGCAGCAGGCCGCCGCCG---ACCAGCCGCCGCCCGTCTTGCTCGAGCTGTTCGTCTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr5D_1116
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------A------TCCATGGGAGCTGGGATGAAGCGCGCGAGGGA
GGAGGAACCAACCGTGCCGCTGGCGCTGTCCCTCAGCACGGACTCGGCGTCT---TCCG---CCGTGACGTCGGCGGACT
CGGGCGCCGCTGGGCC------------------------------------GGCCAAGCGCAGGAGGGGCGTCGTGGTG
GCGACGTCGGGGGAGGGGGAGTTCGTGTGCAAGACTTGCGGGCGGGCCTTCGCGTCGTTCCAGGCGCTGGGCGGGCACCG
GACCAGCCACCTCCGGGGCCGCCACGGGCTGGAGCTCGGCGTCGGCGTCGCCAGAGCCATCAAGGAACGGAAAAAGCGTG
ACGAGA---AGCAGCACGAGTGCCACATCTGCGGGCTGGGTTTCAAGATGGGACAGGCGCTCGGGGGCCACATGAGGCGG
CACCGTGAGGAGATTG---------CAC------------TGCGCAGCGCCGACGATCGCTGGGTCGCGCTGCTGCCGGA
TCAAAAGGTGGAGGGGCAGCAGGCTGCCGCCG---ACCGGCCGCCGCCCGTCTTGCTCGAGCTGTTCGTCTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-------------------S-----------S-------------S-------S-S-----S----
S------------------S---------------------------------------S--S----------------S
----------S--S-S-SS-------S-----------------------S-------S---------------------
S-------------------------------S---S---------------S---------------------------
---------------------------------------S-----S----------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
----------------------------------SSSSS-----------------------------------------
---------------------------------------------------------------------S---S------
--------------------------------SSS---------------------------------------S-----
-S--------------------------------------------S-------------------------S-------
----------S-----------------------------------------------------S---------------
--------------------------------------------------------------------------------
----------------------------------------------S--------------------S------------
---------------------------------------------S------------S---------------------
----------------------------SSSSSSSSSSSS----------------------------------------
-----------------------------------------------------------------------------S--
-------------------------------------------------------------------------------S
---S-----------------SS---------------------------------------S-----------------
--------------SS-SSS------------------S-------------------------------S---------
-----------------S--------S------------S-----S----S--S-----SS--------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_205
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GACCATTGGTCCCGGTTCAT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_2210
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GCATCCACTTTGCATCCACC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
