>input_sequence_69128
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--CTATATAAACAGCAGAAGGAACCAGCTAAGTAGTACAAGTCTACAACAACCACAACCAAAAGGACTTAGGAGAAAA-A
AAAACAGTAGACAATTACGTTATGGCTCTAATCCGGATCAACACAAGTGTTCTGTGCTTGATTGCACTTTTGATGGTTTC
AACCACTTTGTTGTCGTGTGAAGCATCAGGGAGGACCATAGGTACATTTCTATTTAGCAGAGTTAAGAAAAATGTTTCAA
CCGTACCTAGTACAGTGAGGTG-TTCCCTTTAGTTATCTTTTTCCTTGAAAGTACCAACTTGAGCAGCCGCGCTCATGCC
CTTATT-------TCAAAGTTGATATGCCTCGTAGTCCTTTAAATCTAGCCTAACTTTTTTGTGCAGGCAAAATCTAGTG
TTATTTAACAATGGCATGGAAGACAAGAGGTGTTTTCCCGTTGATTTCATGAATTATGACCACAATAACAATTGGGTCGT
CGTATGTATGGTTTTGGTAGTACTGGCAACGACATGAAATATATCAGTAGATGTTCTGCCTGTGTTTGCATAGGAGTACA
TTTCTTTCATAGAATTCTGAGCTTAAGTACTAACTGCAACATTTATTGCCGTAGGCCTGGAAGACGACGTTTGCGGTGGG
AAGTACCGTGAACCCTACGGTCGTTGTATCGATGCTAAGTCGTGTGATGTCTTCTGCAAGCAAGATAAAAAGGGAGGCGG
GGCCTGCCGTAATGGTGCATGTTGTTGCTTCTTGTAGAACAAGAAAATGACCATGAATATAGTGTGGAA-----------
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>chr3B_1_TraesCS3B01G170100
ACAACTGGAAAGAATTGC-AAACAA-TCATAACCCGGAGATCTCATTCC-AAAAAA-TGCTAATATCGATGGAGGGGTGG
TTTCCTTCAATAGGTGGAAAACATAGGAAATATTGGATGTTATCAAGGAAAGGTAAAAAT-TTAGAAAAGTTAGGATTTT
GAACTGATTTCTATGTAAATGGGGTTTTATTGTTTGGTAACATGATATCAGTACCTTCCT--GTTTGTGACGTGTCTGAT
TAGAAAAGTTTGCAAATGTTAAGAAACTATTTAGTGGGAGG--AAATTTTTGTGACGTGTCTGTTATTTGTTTCCTAAAA
TAAATTTCACTAATGAGAGAAATCGATTGATTTAGATAAGTTAGGAAATTTAGATTCAAATCTATTATTAGTTTCTTAAA
AATT-TGTTATTTGTTTGCTAAGACAAATTGAACCAATAAAAGGAATCGATTGATATGAATAATTTAAGGAAGTTAGGTT
CGTGATTTGTTATACGTTAGGAAAGTCCTGGTTATAATAAAGAGTGAAGAGAAAAATAAACCGATGGACCAGGATGGGAG
GAGGTGGTGGGAGGAGAGACGAAAAAAAACTCAGCGAAAATAAACCGTGGGGACTATTCACCAACTGCTCCATTAGGAGT
AGAGACACCATGTATCTTGTTACGGAATACTAATTAATTTCCTATGTAATTTTGGAGCGAATAAATGCCATAATTTCTTA
TATATGGAGTACTATTAGTAATTAATTTCGTTCGTAAATAATATTGGGAGCCAATAAATGTCATAATGTTGTTATGGAAA
AACTAATTAATTTTACATGGTTATTTTTAGGAGGCAATAAA-TTCCATAATTGTGTTATGAAATGTTAATAAATTCCTAA
TGGATATTCTTGTAGTCAGTCAATCCATACCTACAGGATATTCGATGATGTGCGT-TCACTTGATGATCCTAATTAACTA
CGGGGG-----------------------------AATGAATAAAATGGCAAAAATTGATACTC-AATAATCGGCCGTGC
CTCTATATAAACAGCAGAAGGAACCAGCTAAGTAGTACAAGTCTACAACAACCACAACCAAAAGGACTTAGGAGAAAA-A
AAAACAGTAGACAATTACGTTATGGCTCTAATCCGGATCAACACAAGTGTTCTGTGCTTGATTGCACTTTTGATGGTTTC
AACCACTTTGTTGTCGTGTGAAGCATCAGGGAGGACCATAGGTACATTTCTATTTAGCAGAGTTAAGAAAAATGTTTCAA
CCGTACCTAGTACAGTGAGGTG-TTCCCTTTAGTTATCTTTTTCCTTGAAAGTACCAACTTGAGCAGCCGCGCTCATGCC
CTTATT-------TCAAAGTTGATATGCCTCGTAGTCCTTTAAATCTAGCCTAACTTTTTTGTGCAGGCAAAATCTAGTG
TTATTTAACAATGGCATGGAAGACAAGAGGTGTTTTCCCGTTGATTTCATGAATTATGACCACAATAACAATTGGGTCGT
CGTATGTATGGTTTTGGTAGTACTGGCAACGACATGAAATATATCAGTAGATGTTCTGCCTGTGTTTGCATAGGAGTACA
TTTCTTTCATAGAATTCTGAGCTTAAGTACTAACTGCAACATTTATTGCCGTAGGCCTGGAAGACGACGTTTGCGGTGGG
AAGTACCGTGAACCCTACGGTCGTTGTATCGATGCTAAGTCGTGTGATGTCTTCTGCAAGCAAGATAAAAAGGGAGGCGG
GGCCTGCCGTAATGGTGCATGTTGTTGCTTCTTGTAGAACAAGAAAATGACCATGAATATAGTGTGGAAATAAAGATT--
-----GAGCATTAAGGATTGTTTTTCTTACTGGATTTTTTTAGGCTACTTCTCTATTTATTTTCCTATTTCTTCTTCTAA
TTTATGTATGGCTAGCCAACCCACCGCTCAGGCTATTAAGAGTGGATCAGATCGAGACTGATGTCGAGAGAAAGAGAGAC
AGAGGCCAAGGGAGTGCGCTGAATCAAACCCAGCCCCTGGTTGTCCCCTCTGCCGCTAGATC-GAAGTCGAAGTAGATCG
GCTCGTCATCGTTGGCAGGCACGGGACCACCACCGATGTTTGATGAAGCGTTGACGGGTCCGAGCTTTCGAACA------
GGTGCCTATACCCTAGCGCAGCGACGCATCACAAAATCACGGAGTCAAAATAACTAAAATCTGATGTAGAAGTTCAACAC
GATACAAGATG---ATTGAGAGAGATTAGTAGATGGTGTGGTGTG-----------------------------------
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---------------------------------------------------------------------------TTAAC
CTTGCCTAGGTCGTGGCTGCAGTCTGAAGAATTAGTGG-----GTGAAGCAGCCTGTGTCGCTGTATGAATCAGATCTAC
AGAAGGGAGAGCAGAGGCTGGCAAACGGCGAAGGCCATAGGACGAGAGGTCAGCAGCGACGCATCCCTAATCCACGCACG
CGCTAATCACGGGAGTATCTCCAGGAAACTTCGAGAAGGCCAATCGCTCAATCTTGCCTTCCTACTATCTAGTGGGCCTC
TGCGTGGGCCCTTTTTTCTTTCTTTACAATATTTGTTCATGTAAAAGATAGTACCTTGTTAGTTAGACCTGGCCATGGGC
AGCCCGTCCCGATCGGCCCGACCTGACCCGGCTCGAAAAAGCAAGACCCAACCTTGTCCACCGGCTGGGCTCGGGCATAG
GTTTCAAGCCCGACGCCCGGGCTGGGTCCGGACCCATAGGCCTGGCGGGCTTTTAGCATGATGGGCCGGGCTCGGGCCCG
ACGGCCGGGCCGGCCCGGGCTCGGGCCTGGGTTTTTTGCATCGGGCTTGGTAGGCCCGGCCCTACAGATGGCCAGTTATA
A
>chr3B_1
ACAATTGGAAAGAATCAC-AAAAAA-TCATAACCCAGAGATCTCATTCC-AAAAAAATGCTAATATCGATGGAGGGGTGA
TTTCCTTCAATAGGTGGAAAACATAGGAAATATTGGATGTTATCAAGGAAAGGTAAAAAT-TTAGGAAAGTTAGGATTTT
GAACTGATTTCTATGCAAATGGGGTTTTATTGTTTGGTAACATGATATCAGTACCTGCCC--GTTTGTGACGTGTCTGAT
TAGGAAGGTTTGCAAATGTTAAGAAACTATTTATTGGGAGG--AAAG-TCTGTGACGTGTCTGTTATTTGTTTCCTAAAA
CAAATTTCACTAATGAGAGAAATCGATTGATTTAGATAAGTTAGGAAAGTTAGATTCAAATCTATTATTTGTTTCTTAAA
AATT-TGTTATTTGTTTCCTAAGACAAATTAAACTAATAAAAGGAATCGATTGATATGAATAATTTAAGGAAGTTAGATC
CGTGATTTGTTATACGTTAGGAAAGTCCTGGTTGTAATAAAGAGTGAAGAGAAAAATATACCGATGGACTAGGATGGGAG
GGGGTGGTGGGAGGAGAGACGAAAAAAACC-CAGCAAAAATAAATCATGGAGACTATTCACCAACTGCTCCATTAGGAGT
AGAGA---------------------------------------------------------------------------
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>chr3B_1
ACAATTGGAAAGAATCGC-AAAAAA-CCATAACCCGGAGATCTCATTCC-AAAAAA-TGCTAATATCGATGGAGGGGTGA
TTTCCTTCAATAGGTGGAAAACATAGGAAATATTGGATGTTATCAAGGAAAGGTAAAAAT-TTAGGAAAGTTAGGATTTT
GAACTGATTTCTATGCAATTGGGGTTTTATTGTTTGGTAACATGATATCAGTACCAGCCC--GTTTGTGACGTGTCTGAT
TAGGAAAGTTTGCAAATGTTAAGAAACTATTTTTTGGGAGG--AAAG-TTTGTGACGAGTCTGTTATTTGTTTCCTAAAA
CAAATTTCACTAATGAGAGAAATCGATTGATTTAGATAAGTTAGGAAAGTTAGATTCAAATCTATTATTTGTTTCTTAAT
AATT-GGTTATTTGTTTCCTAAGACAAATTGAACCAATAAAAGGAATCGATTGATATGAATAATTTAAGGAAGTTAGGTC
CGTGATTTGTTATAAGTTAGGAAAGTCCTGGTTGTAATAAAGAGTGGAGAGAAAAATAAACTGATGGACCAGGATGGGAG
G-GGTGGTGGGAGGAGAGACGAAAAAA-CC-CAGCGAAAATAAACCATGGAGACAATTCACCAACTGCTCCATTAGGAGT
AGAGA---------------------------------------------------------------------------
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>chr2B_1
ACAATTGGAAAGAATCGCAAAAGAA-TCATAACCCGGAGATCTCATTCC-AAAAAA-TGCTAATATCAATGGAGGGGTGA
TTTCCTTCAATAGGTGGAAAACATAGGAAATATTGGATGTTATCAAGGAAAGGTAAAAAT-TTAGGAAAGTTAGGATTTT
GAACTGATTTCTATGCAAATGGGGTTTTATTGTTTGGTAACATGATATCAGTACCTGCCCCTGTTTGTGACATGTCTGAT
TAGAAAAGTTTGCAAATGTTAAGAAACTATTTATTGGGAGG--AAAG-TTTGTGACGTGTCTGTTATTTGTTTCCTAAAA
CAAATTTCACTAATGCGAGAAATCGTTTGATTTAGATAAGTTAGGAAAGTTAGATTCAAATCTATTATTTGTTTCTTAAA
AATT-TGTTATTTGTTTCCTAAGACAAATTGAACCAATAAAAGGAATCGATTGATATGAATAAATTAATGAAGTTAGATC
CGTGATTTGTTATACGTTAGGAAAGTCCTGATTGTAATAAAGAGTGGAGAGAAAAATAAACCGATGGACCAGGATGGGAG
GGGGTGGTGGGAGGAGAGATGAAAAAAAAC-CAGCGAAAATAAATCGTGGAGACTATTCACCAACTGCTCCATTAGGAGT
AGAGATACCAT---------------------------------------------------------------------
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>chr2B_1
ACAATTGGAAAGAATCGCAAAAAAA-TCATAACCCGGAGATCTCATTCC-AAAAAAATGCTAATATCGATGGAGGGGTGA
TTTCCTTCAATAGGTGGAAAACATAGGAGATATTGGATGTTATCAAGGAAAG-TAAAAAT-TTAGGGAAGTTAGGATTTT
GAACTGATTTCTATGCAAATGGGGTTTTATTGTTTGGTAACATGATATCAGTACCTGCCC--GTTTGTGACGTGTCTGAT
TAGGAAAGTTTGCAAATGTTAAGAAACTATTTATTGGGAGG--AAAG-TTTGTGACGTGTCTGTTACTTGTTTCCTAAAA
CAAATTTCACTAATGAGAGAAATCGATTGATTTAAATAAGTTAGGAAAGTTAGATTCAAATCTATTATTTGTTTCTTAAA
AGTT-TGTTATTTGTTTCCTAAGACAAATTGAACCAATAAAAGGAATCAATTGATATGAATAATTTAAGAAAGTTAGATC
CGTGATTTGTTATACGTTAGGAAAGTCCTGGTTGTAATAAAGAGTGGAGAGAAAAATAAACCGATGGACCAGGATGGGAG
GGGGTGGTGGGAGGAGAGACGAAAAAAACC-CAGCGAAAATAAACCGTGGAGACTATTCACCAACTGCTCCATTAGGAGT
AGAGA---------------------------------------------------------------------------
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>chr2B_1
ACAATTGGAAAGAATCGCAAAAAAA-TCATAACCCAGAGATCTCATTCC-AAAAAA-TGCTAATATCGATGGAGGGGTGA
TTTCCTTCAATAGGTGGAAAACATAGGAAATATTGGATGTTATCAAGGAAAGGTAAAAAT-TTAGAAAAGTTAGGATTTT
GAACTGATTTCTATGTAAATGGGGTTTTATTGTTTGGTAACATGATATCAGTACCTGCCC--GTTTGTGACGTGTCTGAT
TAGGAAAGTTTGCAAATGTTAAGAAACTATTTATTGGGAGAGAA--G-TTTGTGACATGTCTGTTATTTGTTTCCTAAAA
CAAATTTCACTAATGAGAGAAATCTATTGATTTAGATAAGTTAGGAAAGTTAGATTCAAATCTATTATTTGTTTCTTAAA
AATT-TGCTATTTGTTTTCTAAGACAAATTGAACCAATAAAAGGAATCGATTGATATGAATAATTTAAGGAAGTTAGATC
CGTGATTTGTTATACGTTAGGAAAGTCCTGGTTGTAATAAAGAGTGGAGAGAAAAATAAATCGATGAACCAGGATGGGAG
GGGGTGGTGGGAGGAGAGACGAAAAAAAACCCAGCAAAAATAAACCGTAAAGACTATTCACCAACTGCTTCATTATGAGT
AGAGA---------------------------------------------------------------------------
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>chr5B_1
ACAATTGGAAAGAATCGC-AAAAAA-TCATAACC-GGAGATCTCCTTCCAAAAAAA-TGCTAATATCGATGGAGGGGTGA
TTTCCTTCAATAGGTGGAAAACATAGGAAATATTGGATGTTATCAAGGAAAGGTAAAAAT-TTAGGAAAGTTAGGATTTT
GAACTGATTTCTATGCAAATGGGGTTTTATTGTTTGGTAACATGATATCAGTACCTTCCC--GTTTGTGACGTGTCTGAT
TTGGAAAGTTTGCAAATGTTAAGAAACTATTTATTGGGAGG--AAAG-TTTGTGACGTGTATGTTATTTGTTTCCTAAAA
CAAATTTTACTAATGAGAGAAATCGATTGATTTAGATAAGTTAGGAAAGTTAGATTCAAATCTATTATTTGTTTCTTAAA
AATT-TGTTATTTGTTTCCTAAGACAAATTGAACCAATAAAAGGAATCGATTGATATGAATAATTTAAGGAAGTTAGATC
CGTGATTTGTTATACTTTAGGAAAGTCCTGGTTGTAATAAAGAGTGGAGAGAAAAATAAACCGATGGACCAGGATGGGAG
GGGGTGGTGGGAGGAGAGACGAAAATAAAC-CAGCAAAAATAAACCATGGAGACTATTCACCAACTGCTCCATTAGGAGT
AGAGA---------------------------------------------------------------------------
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>chr1B_1
ACAATTGGAAAGAATCGC-AAAAAA-TCATAACCCGGAGATCTCATTCC-AAAAAA-TGCTAGTATCGATGGAGGGGTGA
TTTCCTTCAATAGGTGGAAAACATAGGAAATATTGGATGTTATCAAGGAAAGGTAAAAAT-TTAGGAAAGTTAGGATTTT
GAACTGATTTCTATGCAAATGGGGTTTTATTGTTTGGTAACATGATATCAGTACCTGCCC--GTTTGTGACGTGTCTGAT
TAGAAAAGTTTGCAAATGTTAAGAAACTATTTATTGGGAGG--A--G-TTTGTGACGTGTCTGTTATTTGTTTCCTAAAA
CAAATTTCACTAATGAGAGAAATCGATTGATTTAGATAAGTTAGGAAAGTTAGATTCAAATCTATTATTCGTTTCTTAAA
AAAAATGTTATTTGTTTCCTAAGACAAATTGAACCAATAAAAGGAATCGATTGATATGGATAATTTTAGGAAGTTAGACC
CGTGATTTGTTATACGTTAGGAAAGTCCTGGTTATAATAAAGAGTGGAGAGAAAAATAAACCGATGGACCAGGATGGGAG
GGGGTGGTGGGAGGAGAGACGAAAAAAACC-CAGCGAAAATAAACCGTGGAAACTATTCACCAACTGCTCCATTAGGAGT
AGAGA---------------------------------------------------------------------------
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>chr6B_1
ACAATTGGAAAGAATCGC-AAAAAAATCAGAACCCGGAGATCTCATTCCAAAAAAA-TGCTAATATCGATGGAGGGGTGA
TTTCCTTCAATAGGTGGAAAACATAGGAAATATTGGATGTTATCAAGGAAAGGT-AAAAT-TTAGGAAAGTTAGGATTTT
GAACTGATTTCTATGCAAATGGGGTTTTATTGTTTGGTAACATGATATCAGTATCTGCCT--GTTTGTGACGTGTCTGCT
TAGGAAAGTTTGCAAATGTTAAGAAACTATTTATTGGGAGG--AAAG-TTTGTGACGTGTCTGTTATTTGTTTCCTAAAA
CAAATTTCACTAATGAGAGAAATCGATTGATTTAGATAAGTTAGGAAAGTTAGATTCAAATATATTATTTGTTTCTTAAA
AATT-TGTTATTTGTTTCCTAAGACAAATTGAATCAATAAAAGGAATCGATTGATATGAATAATTTAAGGAAGTTAGATC
CGTGATTTGTTATACGTTAGGAAAGTCCTGCTTGTAATAAAGACTGGAGAGAAAAATAAACCGATGGACCAGGATGGGAG
GGGGTGGTGGGAGGAGAGACGAAAAAAACC-CAGCAAAAATAAACCGTGGAGACTATTCACCAACTGCTCCATTAGGAGT
AGAGA---------------------------------------------------------------------------
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>chr4B_1
ACAATTGGAAAGAATCGC-AAAAAA-TCATAACCCGAAGATCTCATTCCAAAAAAA-TGCTAATATCGATGGAGGGGTGA
TTTCCTTCAATAGGTGGAAAACATAGGAAATATTGGATGTTATCAAGCAAAGGT-AAAAAATTAGGAAAGTTAGGATTTT
GAACTGATTTATATGCAAATGGGGTTTTATTGTTTGGTAACATGATATCAGTACCTGTCC--GTTTCTGACGTGTCTGAT
TAGAAAAGTTTGCAAATGTTAAGAAACTATTTATTGGGAGG--AAAG-TTTGTGACATGTCTGTTATTTGTTTCCTAAAA
CAAATTTCACTAATGAGAGAAATCGATTGATTTAGATAAGTTAGGAAAGTTAGATTCAAATCTATTATTTGTTTCTTAAA
AATT-TGTTATTTGTTTCCTAAGACAAATTGAACCAATAAAAGGAATCGATTGATATGAATAATTTAAGGAAGTTAGATC
CGTGATTTGTTATACGTTAGGAAAGTCCTGGTTGTAATAAAGAGTGGGGAGAAAAATAAACCGATGGACCAGGATGGGAG
GGGGTGGTGGGAGGAGAGACGAAAAAA-CC-CAGCGAAAATAAACCATGTAAACTATTCACCAACTGCTCCATTAGGAGT
AGAGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1D_635
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----ACACCGGGTATCTTGTTACGGAATACTAATTAATTTCCTATGTAATTTTGGAGCAAATAAATGCCATAATCTTGGT
ATGGAG------TATTAGTAATCAATTTCGTCCGTAAATAATATTGGGAGCCAATAAATGTCATAATGTTGTTATGGAAA
A-CTAATTAATTTTGCGTGGTTATTTTTAGGAGGTTATGAA-TT-CATAATTGTGTTATGGAGTGCTAATAAATCCCTTC
TGGATATTTTTGTAGTCGGTCAATCCATACCTACAGGATATTCCATGATGTGCTTATTATCTGAGGATCCTAATTAATTA
AGGCGAATTGTAGGAAGGAAACACACCAAAGCAGCAACGAATAAAATGGCAAAAATTGATACTCGAACAATCGCCCGTTC
CTCTATATAAACATCAGAAGGAACCAGCTAGGTAGTACAAGTCTACAACAACCACAACCAAAAGGACTTAGGAGAAGA-A
AA--GAGTAAACAATTTCGTTATGGCTCTAATCCAGATCAACGCAAGTGTTCTGTGCTTGATGGCACTTTTGATGGTTTC
GACCACTTTTTTGTCGTGTGAAGCATCCGGGAGGAACATAGGTAAAGTTATATTTAACAGAGCTTA--------------
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>chr1D_635
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----ACACCGTATATCTTGTTACGGAATACTAATTAGTTTCCTATGTAATTTTGGAGCAAATAAATGCCATAATTTTGGT
ATGGAG------TATTAGTAATCAATTTCATCCGTAAATAATATTGGGAGCCAATAAATGTCATAATGTTGTTATGGAAA
A-CTAATTAATTTTGAGTGGTTATTTTTACGAGGTAATGAATTT-CATAATTGTGTTATGGAATGCTAATAAATTCCTTT
TGGATATTTTTGTAGTCGGTCAATCCATACCAACAAGATATTCCATGATGTGCTTATTATATGAGGATCCTAATTAATTA
AGGTGAATTGTAGGAAGGAAACACACCAAAGCAGCAATGAATAAAATGGCAAAAATTGATACTCCAAGAATCGCCCGTGC
CTTTATATAAACAGCAGAAGGAACCAGCTAGGTAGTACAAGTCTACAACAACCACAACCAAAAGGACTTAAGAGAAGA-A
AA--GAGTAAACAATTTTGATATGGCTCTAATCCGGATCAACACAAGTGTTCTGTGCTTGATGGCACTCTTGATGGTTTC
AAACACTTTTTTGTCGTGTGAAGCATCAGGGAGGAACATAGGTAAAGTTATATATA------------------------
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>chr1A_635
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----ACACCGTGTATCTTGTTACGGAATACTA-TTAATTTCCTATGTAATTTTGGAGCAAATAAATGCCATAATCTTGGT
ACGGAG------TATTAGTAATCAATTTCGTCTGTAAATAATATTGGGAGCCAATAAATGTCATAATGTTGTTATGAAAA
A-CTAATTAATATTACGTGGTTATTTTTAGGAGGTAATGAATTT-CATAATTGTGTTATGGAATGCTAATAAATTCCTTG
TGGATATTTTTGTAGTCGGTCAATCCATACCAACAGGATATTCCATGATGTGCTTATTATTTGGGGATCCTAATTGATTA
AGGTGAATTGTAGGAAGGAAACACGCCAAAGCAGTAATAAATAAAATGGCAAAAATTGATACTCCAAGAATCGCCCGTGC
CTCTATATAAACAGCAGAAGGAACCTGCTAGGTAG--CAAGTCTACAACAACAGCAACCAAAAGGACTTAGGGGAAGA-A
AA--GA-TAAACAATTTCGTTATGGCTCTAATCCGGATGAACACAAGTGTTCTGTGCTTGATGGCACTTTTGATGGTTTC
AACCACTTTTTTGTCGTGTGATGCATCAGGGAGGAACATAGGTAAAGTTATATTTAATAGAGCTTA--------------
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>chr1D_639
--------------------------------------------------------------------------------
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--------CATGTATCTTGTTACGGAATACTAATTAATTTCCTATGTAGTTTTGGAGCGTATAAATGCCATAATCTTCGT
ATGGAG------TATTAGCAATCAATTTCGTCCGTAAATAATATTGGGAGCCAATAAATGTCATAATGTTGTTATGGAAA
A-CTAATTAATTTTGCGGGGTTATTTT-AGGAGGCAATAACTTT-CATAATTGTGTTATGGAATGCTAATAAATTCCTTC
TGGATATTTTTGTAGTCGGTCAATCCATACCAACAGCGTATTCCAGGATGTGCTTATTATCTGAGAATCCTAATTAATTA
CAGAGAATTGTAGGAAGGAAACACATCAAAGCAGCAATGAATAAAATGGGAAAAATTGATACTCCAAGAATTTCCCGTGC
CTCTATATAAACAGCAGAAGGAACCAGCTAGGTAGTATAAGTCCACAATAACCACAACCAAAAGGACTTAGGAGAAGA-A
AA--GAGTAAACAATTTCGTTATGGCTCTAATCCGAATCAACACAAGTGTTCTGTGCTTGATGGCACTTTTGATGGTTTC
AATCACTTTTTTGTCGTGTGAAGCATCAGCGAGGAACATAGGTATAGTTATATTTAACAGAGCTTA--------------
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>chr1D_639
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--------CATGTATCTTGTTACGGAATACTAATTAATTTCCTATGTAGTTTTGGAGCGTATAAATGCCATAATCTTCGT
ATGGAG------TATTAGCAATCAATTTCGTCCGTAAATAATATTGGGAGCCAATAAATGTCATAATGTTGTTATGGAAA
A-CTAATTAATTTTGCGGGGTTATTTT-CGGAGGCAATAACTTT-CATAATTGTGTTATGGAATGCTAATAAATTCCCTC
TGGATATTTTTGTAGTCGGTCAATCCATACTAACAGCGTATTCCATGATGTGCTTATTATCTGAGAATCCTAATTAATTA
CGGAGAATTGTAGGAAGGAAACACATCAAAGCAGCAATGAATAAAATGGCAAAAATTGATACTCCAAGAATTTCCCGTGC
CTCTATATAAACAGCAAAAGGAACCAGCTAGGTAGTATAAGTCCACAATAACCACAACCAAAAGGACTTAGGGGAA-AAA
AA--GAGTAAACAATTTCGTTATGGCTCTAACCCGAATCAACACAAGTGTTCTGTGCTTGATGGCACTTTTGATGGTTTC
AATCACTTTTTTGTCATGTGAAGCATCAGGGAGGAACATAGGTAAAGTTATATTTAACAG--------------------
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-
>chr3D_963
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-------------------------------------------AAATGGCAAAAATTGATACTC-AAGAATCGGCCGTGC
CTCTATATAAACAGCAGAAGGAACCAGCTAAGTAGTACAAGTCTACAACAACCACAACCAAAAGGACTTAGGAGAAGAAA
AA--CAGTAGACAATTACGTTATGGCTCTAATCCGGCTCAACACAAGTATTCTGTGCTTGATGGCACTTTTGATGGTTTC
AACCACTTTGTTGTCGTGTGAAGCATCAGGGAGGACCATAGGTACATTTCTATTTAGCAAAATTAAGAAAAATGTTTCAA
CCGTACCTAGTACAGTGAGGTGTTTCCCTTTAGTTATCTTTTTCC-TGAAAGTACCAACTTGAGCAGCCGCGCTCATGCC
CTTATTTCATAATTCAAAGTTGATATGCCTCGTAGTCCTTTAAATCTAGCGTAATTTTTTTGTGCGGGCAAAATCTAGTG
TTATTTAACAATGGCATGCAAGACAAGAGGTGTTTTCCCGTTGATTTTATGAATTATGACCACAATAACAATTGGGTCGT
AGTATGTATGATTTTGGTAGTACTGGCAATGACATGAAATATATCAGTAGCTGTTCTGCCTGTGTTTGCATAGTAGTACA
TTTCTTTCATAGAATTCTGAGCTTAACTACGAACTGCAACATTTATTGCTGTAGGCCTGGAAGACGACGTTTGCGGTGGG
AAGTACCATGAACCCTACGGTCGTTGTATCGATGCTAAGTCGTGTGATACCTACTGCAAGCAAGATAAAAAGGGAGGCGG
GGCCTGCCGTAACGGTGCATGCTGTTGCTTCTTGTAGAACAAGAAAATGACCAATAATAAAGTGTGGAAATAAAGATTTA
CTTGGGAGCATTAAGAATTGTTTTTGTTACTGGATTTTTTTTGGCTACTTCTCTATTTATTTTCCTATATCTTCTTCTAA
TTTATGTGTGGCTAGCCAACCCAACGCTCAGGCTATTAAGAGTAGATCAGATCGAGATTGATGTCGAGAGAAAGAGAGAC
AGAGG---AGGGAGTGCGCTGAATCAAACCCAGCCCCTCGTCGTCCCCTCTGCCACTAGATC-GAAGTCGAAGTACATCG
GCTCGTCATCTTTGGCAGGCACGCGACCACCGCTGATGTTTGGCGAAGCGTTGACGGGTCCGAGCTTTCGAACAATTACA
GATGCCTATACCCTAGCGCAGCGACGCATCAGAAAATCACAGAATCAAAATAACTAAAATCTGATGTAGAAGTTCAACAC
GATACAAGATG---ATTGGGAGAGATTAGTAGATGGTGCGGTGTG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TTAAC
CTTGCCTAGGTCGTGGCTGCAGTCTGAAGAATTAGTGG-----GTGAAGCAGCCTGTGTCGCCGTATGAATCAGATCTAC
AGAAGGGAGAGCAGAGGCTGGCAAACGGCGAAGGCCATAGGATGGGAGGTCGGCGGCG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr2D_1963
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GAATCAAACCCAGCCCCTCGTCCTCCCCTCTGCTACTAGGTCAGAAGTCGAAGTAGATCG
GCTCGTCATCGTTGGCAGGCACGCGACAACCACGGATGTTTGATGAAGGGTTGACGGGTCCGAGCTTTCAAACAATTACC
GGTGCCTATACCCTAGCACGGCGACTCATCACAAAATCACAAAATCAAAATAACTAAAATCTGATGTAGAAGTTCAACAC
GATACAAGAAGGTAATTGAAAGAGATTAGTAGATGGTGTGGTGTGTTAGAGGGTGCTTGGATACGTTTTAGTCTCATGAC
TAAAAGTAGTGGAACTAAAACTTACTAGCCTCACCCATGCTTGGATCCAAATACTAAAGAGACTAAAATCAAGTTAATGA
ACATTTATTATCCTCCAAAACCCTCCAATCCAGAACTCGCATGTGTTAAAGGAGAGGAGTTAAATGAGGAGAGAGATGAC
TAATCCACATTTTAGTAGGGGTACCCCTGACTAAAAATTTTTAGTCTCAAGACTAGTTTTAACCCCTCTTTAGTCAGGGG
TGCTTGGAACTTTAGCCTCTTAAAGAGACTATTTTTAGTCAGACTAAAATAAGTCCCTTGGATCCAAGCACCCTCTTAAC
CTTGCCTAGGTCGTGGTTATAGTCTGAAGAATTGGTGG-----GTGAAGCAGCCTGTGTCACCGTATGAATCAGATCTGC
AGAAGGGAGAGCAGAGGCTGGCAAACGGCGAAGGCCATAGGACGGCAGGTCGGCAACGATGCATCCCCAATCCACGCACG
CGCTAATCACGGGAGTATCTCGAGGAGACTT-GAGAAGGCCAATCGTTCAATCTTGCCTTACGACTATCTCATGGGCCTC
TACGTGGGCCTTTTTTT---TCTTTAGAACGAGAGTTCACGTAAAGATAG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr1D_1964
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AATCAAACCCAGCCCCTCGTCATCCCCTCTGCTGCTAGGTC-GAAGACGAAGTAGACCG
GTTCGTCATCGTTGGCAGGCACGCGACAACCACGGATGTTTGACGAAGCGTTGACGGGTCCGAGCTTTCGAACAATTACA
GGTGCATATACCCTAGCGCAGCGACACATCACAAAATCACAAAATCAAAATAACTAAAATCTGATGTAGAAGTTCAACAC
GATACAAGAAGATAATTGAAAGAGATTAGTAGATGGTGTGGTGTGTTA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AC
CTTGCCTAGGTCGTGGCTGCAGTCTGAAGAATTGGTGGGTGACGTGAAGCAGCCTGTGTCACCTTATGAATCAGATCTAC
AGAAGGAAGAGCAGAGGCTGGC-------------CACAGGACGGCAGGTCGGCAGCGACACATCCTTAATCCACGCACG
CGCTAATCACGGGAGTATCTCGAGGAGACTT-GAGAAGGCCAATCGTTCAATCTTGCCTTACGACTATCTCATGGGCCTC
TACGTGGGCC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr7D_1964
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AATCAAACCCAGCCCCTCGTCGT-CCCTCTGCTGCTAGGTC-GGAGACGAAGTAGATCG
GTTCGTCATCGTTGGCAGGCACGCGACAACCACGGATGTTTGACGAAGCGTTGACGGGTCCGAGCTTTCAAAGAATTACA
AGTGCCTATACCCTAGCGCGGCGACACATCACAAAATCACAAAATCAAAATAACTAAAATCTGATGTAGAAGTTCAACAC
GATACAAGAAGATAATTGAAAGAGATTAGTAGATGGTGTGGTGTGTTA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AC
CTTGCCCAGGTCGCGGCTGCAGTCTGAAGAATTGGTGGGTGACGTGAAGCAGCCTGTGTCACCTTATGAATCAGATCTAC
AGAAGGGAGAGCAGAGGCTGGC-------------CATAGGACGGCAGGTCGGCAGCGAGGCATCCCTAATCCACGCACG
CGCTAATCACGGGAGTATCTCGAGGAGACTT-GAGAAGGCCAATCGTTCAATCTTGCCTTACAACTATCTCATGGGCCTC
GACGTGGG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>SNPs
----S----------S------S--------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S------------SS--------------------------------
S-----------------------------------------------S--------------------S----------
-----------------S-------------------------------------------------------------S
--------------------------------------------------------------------------------
-S----------------------------S-------------------S-----------------------------
----------------------------------------------------------------------------SSSS
SSSSS-SSSSSS----------S--------S------------------------------------------------
-S--------------S---------------------------S---------------S----S------------SS
--------S--------S-------------------------S---------S---S-S----S------------S--
---S-S-------------------------------------------------------------S------------
----------------------------------------------------------------------------S---
--SS----------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------S---S----------S--------------
------------------S----------------------------S--------------------------------
S---------S------------------S--------------------S----------------------S------
--------------------------S---S------------------S------------------------------
-------S----------------------------------------SS--S---------------------------
------------S--------S-------------------------------SS----S--------------------
---------------S---------S---------------S--------------------------S-----------
-------S---------------S-------------------S-------------S----------------------
-----SSS------------------------------S--S--------------------------------------
-----------------------S---------S----------------------------------------------
----------------------------------------S--S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------S------S----------------------------
---------------------S----S----S--------------S-------------S-S-------SS--------
-S--------S------SSS------S--SSSSS-----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S
>forward_611
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TCAGCGAAAATAAACCGTGGG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_2008
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAGGGAGTGCGCTGAATCAA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
