>input_sequence_69105
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-----------------------------------------ACACACACGCAAACTATAGTAGCAACAATTGCTTAGCAT
CAAGA------AAGCTATAATGTCGAGGCAGCAAGCGAGGAGCTCGAGCTACCGGAAGAAAGTGGCGGCGGGGGCGTCGT
CTCACCACCACAACCACGGCGGCAAGGCGCACTACGGCCACGGCGGGAGACCGGCACCAAGGTGGCCTGCCAGGGTCATG
GACGGGTTCAGGAAGATGCTGGTGGGCCTGTTCGCCTTCCCGCCGCGGCCGCCCAAGGTCACCTTCTCCGCCAATGGCAG
GGGCGGTGGCGAGGACGCCGTGGCGCCCAAGAGGCCGTCGTGCAGCAACAGCTCCAACCTGCAGCCGGTGAACAACGCGC
ACTACGACGAGGCCATCTCTGACTGCGTCGAGTTCTTCCACCGCTCCGCCAGGGTGGACATCAGGTCAAGGCCGTCGA--
-CGTCGGCCCACTTCTGAAA----AATTCCCATTGTCGTCGTCGTCAACTTCGTCCTAGCAGTTGGGATATCCCAGTTTG
TGTGTGTGGGCATG------------TGTATATATGTGCACGTGTCTATGCAATCTAGATTAGGTTACTTAAATTTGCTC
ATGTGTGCGTGTCTCTCTGTCATGTTACTATGTTTTTTTTTTTGGCATCTGTCATGTTTTCGTATGTTACCGTGTTATTA
GTACCATGGGCAGCGAGCGGGCCAACGGCCGGCTGCAGGTCAATGGCAATCAAGTATCAAAGTTGGTCGTTTTGGACGTG
AGGATGTTGCAAGGTTCTAATGGGCTAGCGATAACTGTGCTATAA-----------------------------------
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>chr2B_1_TraesCS2B01G016200
ACTTGGCAGTTGGATTTTTATCTATGTTAATTGTTTAGCTCGTGTACGTGCCAGATGTTCCTAAAGTTCCCAACAAGAGC
GATGGAGATATATCATTGATGTTCATGTTTAGTACTTGGCTGTTGATATTTCGCAAAAAAAGTACTTAGCAACTGTTAGC
AGTGATCGCATGGACTTATTATTTAAAAAAGGGGATAAACAATTGCTATTGCCATTTTTTGGCGTGATTGACAAATTTTC
ATTGTACTTAGGTTACTAATATACTTTCTTCAAATACTTCGTAGTAAACTTGGCCATGGACCTTCTTTTACGGGGAAAAC
TTCCGATCTATTAATCATCTGTCATAGCAGTACAGGAACATGAAAGCATTATGTAGGCATATAAGTAGCTCATACATGGT
CAAGACTTGAGATTAATTACTTCCAGTGAGTATTAATTTATTTCCTCTTTTTCATATGGGAGATAAGAAGGTAAGAGTTA
CTCTGACCCACTATTTAATGAAATCAATGACTTGGATCTTACCTCTTATATGAAAAGATGAGGTAAGTGGGAACATGTTA
AAACTGCTCGTATTGGCATTGTGTTTATCACTTTCTACCAGGTTTTGAATTGAGAGGAAGAATCTGATATAGTTAACAGT
TACGGTCATCAAAATAAACATCTCATTTCCTAATGGC-AAAGGCAAAGTATATGTTAACTACAAAGGCATCGAGATAGAG
GGCCCTCCTCAGTGATGATCACTGCACATGGATCCTTGTACCTTCAAGCCTTAAAATTCCCAAAAGGTGCATCCATTGCT
CCGCACATCTTGTCATCACAATTCAGCACTAATTCTTTGGCCCATCACATCGACGCTCAGTTGGTCCCTCTGGTTAATTA
ACTAACTAATCACCATTAGACAGGCACTTATAGATAGGAGTCCGTTCATCAGCCAACACATGTATGGATGCAGTTCCCAC
CTACCTAGCGAGTACTAGCAACCTTACTTAGCTTTGCACACACACACACGCAAACTATAGTAGCAACAATTGCTTAGCAT
CAAGA------AAGCTATAATGTCGAGGCAGCAAGCGAGGAGCTCGAGCTACCGGAAGAAAGTGGCGGCGGGGGCGTCGT
CTCACCACCACAACCACGGCGGCAAGGCGCACTACGGCCACGGCGGGAGACCGGCACCAAGGTGGCCTGCCAGGGTCATG
GACGGGTTCAGGAAGATGCTGGTGGGCCTGTTCGCCTTCCCGCCGCGGCCGCCCAAGGTCACCTTCTCCGCCAATGGCAG
GGGCGGTGGCGAGGACGCCGTGGCGCCCAAGAGGCCGTCGTGCAGCAACAGCTCCAACCTGCAGCCGGTGAACAACGCGC
ACTACGACGAGGCCATCTCTGACTGCGTCGAGTTCTTCCACCGCTCCGCCAGGGTGGACATCAGGTCAAGGCCGTCGA--
-CGTCGGCCCACTTCTGAAA----AATTCCCATTGTCGTCGTCGTCAACTTCGTCCTAGCAGTTGGGATATCCCAGTTTG
TGTGTGTGGGCATG------------TGTATATATGTGCACGTGTCTATGCAATCTAGATTAGGTTACTTAAATTTGCTC
ATGTGTGCGTGTCTCTCTGTCATGTTACTATGTTTTTTTTTTTGGCATCTGTCATGTTTTCGTATGTTACCGTGTTATTA
GTACCATGGGCAGCGAGCGGGCCAACGGCCGGCTGCAGGTCAATGGCAATCAAGTATCAAAGTTGGTCGTTTTGGACGTG
AGGATGTTGCAAGGTTCTAATGGGCTAGCGATAACTGTGCTATAACTTTATAGTAGCCTTCCTACGCAAAAAGATAAAAT
AAAATAAAAAACCTTTGCAGTAGCCTTTTAGACATGGATTGATAGAGAATGAAAATTAGGAACACAAGAGAATGAAATGA
AATGGGAGACATCACCAGGGAGAAGAGTTGGGCGATGAACCATGGATTGATAGAGCGTCGATCCATGTGAGCAACCTAAA
ACACCACATGATCTCCGGTATC-CCGACTCAGCCACGACAACCACACTAGGAATCAGATAGAGCAACGAGACCTCTATTT
TGTGCCACATAGTCTCAACCAACAGGATGTTCTCACCATGGACACTAATAGATAACATAGACATGAATTAAACTCCATTT
GAAACACTGATCTATAGTTCCCTTCCACTCTAGGTAAGCTATAATGGGCTATTTAAAACTTTGCACATAATTATATAAGA
AAGAATGGCGAAGCTATAATGGGATTAGTTCCCTTCCACTCTAGGTAAGCTATAACGGGTTATTTAAAACTGTGTACATA
AATATATAAGTAAGAATAGCCAAGCTACAATGGGTAAGAAACATTGATCTATATATATGACACCAGATTAGTGCTCGGTT
TTGATGTTCGAACATGTGTGTATATGTCAAGTGAATGCGATACATATACGATGTCTGACTGTATTTTTATTTTTATTTTT
TCATCATTTAAGAAAAAAAAAGACTAAATGAGGCTTAGCTTCGCTATAGCTTTACATAGCTTCTGGCTC-----------
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---AGCCACCGCTAAATGGCATAGCTAACTATCTAAAACATTGGATATGTATAATGATTATGTTATATATTAAAAGGATA
TATGCTAATTTATTGCCCTATATGCTCTACGTGATTTTCCTTCCTTTTATTTGCAAGCAAACATGGAAAGTCAATAGAAC
ACATACCAAATTATGCCATTAGTACTATGGTAGATGGTCATGTTCTATGTGAAATATCGTGTTGCTACGGTATATTTATT
TGAAAAAGTCACCTTTGATT
>chr2D_604
TTTGAAT-------------------------------------------------------------------------
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-------------------------------------------------TTGACAGGAGGAAGCTGGCACAGTT--CAAT
TACAAGCATCAAAACAAACATCCCATTTCCTAATGG-GAAAGGCAAAGTATATGTTAACTACAAAGGCATCAAGCA--AG
GGTCCTCTTCAGTGATGATCACTGCACATGGATCCTTGTACCTTCAAGCCTTAAAATTCCCAAAAGGTGCATCCGTTGCT
CCGCACATCTTGTCATCAGCATTCAGCACTAATTCTTTGGCCCATCACATCCACGCTCAGTTGGTACCTCTG-TTAATTA
ACTAACTAATCACCATTAGACAGGCACTTATAGATAGGACTACATTCATCAGCTAACACATGTATACATGCGGTTCCCAC
CTACCTAGCGAGTACTAGCAACCTTACTTAGCTTTGCACACACACACACACG--------------CAATTGCTTAGTAA
CCAGCATCAAGAAGCTATAATGTCGAGGCCGCAAGCGAGGAGCTCGAGCTACAGGAAGAAAGCGGCGGCGGGGGCGTCGT
CTCACCACCACAACCACGGCAGCAAGGCGCACTACGTCCATGGCGGGAGACCTGCACCAAGGTGGCCTGCCAGGGTAATG
GACGGGTTCAGGAAGATGCTGGTGGGCCTGTTCGCCTTCCCGCCGCGGCCGCCCAAGGTCACCTTCTCCGCCAACGGCAG
GGGCGGTGGCGAGGACGCGGTGGCTCCCAAGAGGCCGTCGTGCAG---CAGCTCCAACCTGCAGCCGGTGAACAACGCAC
ACTACGACGAGGCCATCTCCGACTGCGTCGAGTTCTTCCACCGCTCCGCCAGGGTGGACGTCAGGTCACGGCCGTCCT--
-CGTCGTCCCACTTCTAAGTTCTGAATTCCCATTGTCGTC------AACTTTGTGCTAGCTTCAAGCATATCCCAC--TG
TGTGTGTGGGCATG------------TGTATGTGTGTGCACGTGTCCATGTAATCTAGATTAGATTACTTAAAGTTGCTC
ATGTGTG--------TCTGTCATGTTACTGTGTTTTTTCTTTTGACATCTGTCAT--GTTAGTATGTTACTGTGTT---A
GTGCTATGGACAGCGAGCAAACT--------GCTGCAGCTCAATGGTAATCAAGTATCAAG------CGTTTTGGACGTG
AGGATGTTGCAAAGTTCTAGTGGGCTAGCGATAACTGTGCTATAACTTTATTGTAGCCTTTTAGACCGAGCAAGGACCAC
TGCTTCGTTCTCGTACTGCAAAAGAA------------------------GAAAACTAGGAACACAAAAGAATGAAATG-
----GGAGACGTCAACAGACCGAAGAGTTGGACGATGAACCATGGATCGATAGAGCGTCGATTCATGTGAGCAACCT-AA
ACACCACATGATCTCCGGTATCGCCGACTCAGCCATGACAACCACACTAGAAAGTAGATAGAACAGCGAGACCTCTATTC
TATGCGATGTAGTCTCAAACAACAGGATGTTGTGACGATTGACACTAATAGATAACATAGACATGAATTAAACTCCATTC
GAAACAT-------------------------------------------------------------------------
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----------------------AGCTACAATGACTCGAGATCGACTCGAAAAGAAATGAGCTAAGTATGAGCATCTTACG
TAGGTTGGTCACAAAACAAGATGATCCTGAGTCAACACGCTTGTCCAATTTTAGCTCCACGACTTGACCTGGTATAATTA
TGAACAAAGTTTTAAATAGCC--------------------CGCTATAGCTTGGCTAGAGATTTTGAAGAGCTCACCGCT
AAAGCTATGCAATTTTATCGCTAAATTGAAAATGACGCTAATAGCCTGCTATTTCAGCTATAACGCTACATTTGGCGTCA
TTTAGCCCGCAAAGCCGCTATACAAAATTATCCTTCTGCTGGTGAATTCTCTTGCCCGAGCTACAATCTCTTCGATTATG
GAGAGCCGCCGCTAAATGGCATAGCCCACTATTTAAGACATTGAATATGTATAATGATTATGTTATATATTAAAAGGATA
TATGATAATTTATTAACCTATATGCTTTACGTTATTTTTCTT-CTTTTATTTGCAAGAAAACATGGAAAGTCAATAGAAC
ACATACCAAATTTAGCCATTAGTACTATGGTAGATGGTCATGTTCTATGTTAAATATCGTGTTGCTATGGTATATTTATT
TGAAAACATCACCTTTGATT
>chr2A_604
TTTGAAT-------------------------------------------------------------------------
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-------------------------------------------------TTGACATGAGGAAGCTGACACAATT--CAAT
TACAAGCATCAAAACAAACATCTCATTTCCTAATGGTGAAAGGCAAAGTATCAGTAAACTAGGAAGGCATCAAGCT--AG
GGCCCTCTTTAGTGATGATCGCTGCACATGGATCCTTGTACCTTCAAGCCTTAAAATTCCCAAAAGGCGCATCCATTGCT
CCGCACATCTTGTCATCACAATTCAGCACTAATTCTTTGGCCCATCACATCGACGCTCAGTTGGTCCCTCTGATTAATTA
ACTAACTAATCACCATTAGACAGGCGCTTATAGATAGGACTACATTCATCAGCTAACACATGTATGCATGCAGTTCCCAC
CTACCTAGCGAGTACTAGCAACCTTACTTAGCTTTGCACACACACACACACACACACATACACAC---------------
---GCATCAAGAAGCTATAATGTCGAGGCCGCAAGCGAGGAGCTCGAGCTACCGGAAGAAAGCGGCGGGGGTGGCGTCGT
CTCACCACCACAACCACGGCAGCAAGGCGCACTACGTCCATGGCGGTAGACCGGCACCAAGGTGGCCTGCCAGGGTCATG
GACGGGTTCAGGAAGATGCTGGTGGGCCTGTTCGCCTTCCCGCCGCGGCCGCCCAAGGTCACCTTCTCGGCCAACGCCAG
GGGCGGTGGCGAGGACGCGGTGGCGCCCAAGAGGCCGTCGTGCAG---CAGCTCCAACCTGCAGCCGGTGAACAACGCGC
ACTACGACGAGGCCATCTCCGACTGCGTCGAGTTCTTCCACCGGTCCGCCAGGGTGGACGTCAGGTCACGGCCGTCGTCT
GCGGCGGCCCACTTCTGAAT----AATTCCCATCGTCGTCGTCGTCAACGTCGTGCT----------ATATCCCAC--TG
TGTGTGGGGGGTTGTGGGCATGTGTATGTATATATGTCCACGTGTCCATGTAATCTAGATTAGATTGCTTAAATTTGCTC
ATGTGTG--------TCTGTCATGTTACTGTGTTTTTC--TTTGTCATCTGTCAT--TTTAGTATGTTACCGTGTT---A
GTAAAATGGACAGCGAGCCAACT--------GCTGCAGGTCAATAGTAA-CAAGTATCAAC------CGTTTTGGACGTG
AGGTTGTTGCAAAGTTCTAGTGGGCTAAAGATAACCGTGTTATAACTTTATGGTAGCCTT--------------------
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>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S----S---S----S-S----SS--S-
---SSS--------S---------------------S----------------------------------S--S-SS--
-------S------------------------------------------------------------------------
------------------------------------------------------------------------S-------
---------------------------------------S-S-S---------S------------S-------------
-------------------------------------------------S--S--SSSSSS-SSSS-----------S-S
-S--S------------------------S--------------------------------S-----------------
--------------------S---------------S---S---------------------------------------
--------------------------------------------------------------------------S-----
------------------S--------------------------SSS--------------------------------
-------------------S---------------------------------------S--------S--------S--
-------------------S----------------------------------S-----SSSSS-S--------SSS--
----------------------------------------------S---S------------S----------------
-------SSSSSSSS--------------S--------S-----S----------SS---S---------------SSS-
----S----S--------SSS-SSSSSSSSS---------------S-------------SSSSSSS-------------
------------S------S-------------------------------S--------SSSSSS-S-SS-SSS-SS-S
SSSS-SSSSSS-S-SSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----------S-----------S
SSSS------S---S---SSS----------S---------------S--------------S--------------S--
-----------------------------------S--------------S--SS-------S--S-------------S
-S---S-SS---------S------------S-S--S--S---------------------------------------S
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS----------SS-SSSS-S-SSSSSSSS-SSS-SSSSS-SSSSS--S--SSSSSSSSS
-S-S-SSSSS-SS-SSSSS-SSS--SSSS---S--SS--S-SSSSSS-SSS-SS--SSSS-SS--SSSS-SS-SSSS--S
-S-S--SSSSSSS---S-SSSSSSSSSSSSSSSSSSSSSSS-----------SS-SSSSSS-S-S-SSS-----------
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-------S-----------------SS-----S---S------S------------------------------------
----S---------SS----------S-----S-----S---S--------------S----------------------
------------SS------------------------------------S----------------S------------
------SS------------
>forward_728
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--------------------------------------------------------------------ATCGAGATAGAG
GGCCCTCC------------------------------------------------------------------------
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>reverse_1922
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-ATGGGAGACATCACCAGGGA-----------------------------------------------------------
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