>input_sequence_69053
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--------------------------------------------------------------ATGGCCGGCCGCGGAGAG
GAGCTGAAGCTGCTGGGCATGTGGGCGAGCCCGTTCGTGGTGCGGGTGCAGATCGCGCTCCGCCTCAAGGGCCTCAGCTA
CGAGTACGTGGAGGAGGACCTGCAGAGCAAGAGCGAGCTGCTCCTGAGGTCCAACCCTGCCCACGCCGGCAAGGTGCCGG
TGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCGGTCATCCTGCGGTACATCGACGAGGCCTTCTCCGGCTCCGGG
CCCTCCCTCCTCCCCGCC---GACCCCTACGGCCGAGCCGTCGCTCTCTTCTGGGCCGTTTTCGTCGACGACACGGTAGG
TGCATACATAATGC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTG----CTACCTCACCCTCACATGGCCGCGTTCATGTA-
-TATACC-GTTTTCA--GTGCAGCTGTTGAAGGCGCGGAGCCAGGCGTTGAGAGGCGAGACGGTCGAAGAGAAGGAGGAG
GGGAGGAAGAAGGCGGCCGTGGCCATGGAAACCTTGGAGGGGGTGTTGATGGAGTCCAAGGCGAGGTTCTTCAGCGGCAG
GGATGTACCCGGCTACCTAGACATCATGCTCGGCGGCCTCCTCGGCTCGATGCGCGCGACGGAGGAGATGTGTGGGCTCC
AGACCTTCGACCCGACCACCACGCCGCTCCTGGCCGCATGGGCGGAGCTCTTCTGCGCGCTGGACGCGGTGGAGCTAGTC
ATGCCGCGCGTCGAGAGGCTCGTCGAGTATGCCGAGGCGATGCAGCAGCCTCGCACCGCCGTGTCCAGCACCACCAACTG
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------
>chr5D_1_TraesCS5D01G027500
CCGTGATGGATCCGTCCTGGGAGGAGCTGCCAACATCCACCATGACACGGGTGCGGCGCGCGGGGTTGCAGGCCATCCGT
CGGGGCGCCGGAGAATGCGACTTCACCTCTCCAACGTCCACTGCTGCGAGGGCCGGCACCGCCTCCCGCGCCCACTGCGT
CGCCGA----GCATGCCGCGCCATGTTTTTGTCGGACGACGCCTATGGTGCGTCTGTGGCCTCGACTCGTCAACAGAGGG
GTTGCACGTCATCCACCGCATTCGGACACCAGACGGACCGCAGCGCCTCCGGTGAGGCAGTGACGGCATACCTA--GCGC
CGGATCCATGC--CATTTGGGCGGATACAATGGATTCCCGACGGAAGGAGTCCGAGCGTTGCC-TCGCAGGGGCTTCCTC
CCAGGAGTGGCCGAGCGCAAGCCGGACAACCATCTCCTCCTCGGGGCCGCGTGGGATGAGCTCAGGGTCGACAGTTCTGG
AGGTGAAGGACTCGAATCCGTTGCCCGCCATGTCAGAGAAGGCTAGAGATCGCCGGAGGGGAGCTTGGGTTGCGGAGTGG
AGTGGAGTTAAATCGCTAGGCTTTGCTCTGACACGACGAACACGTCCGAGTATTTTATATCCGCCTTATATTTGGGTTAG
ATACGAGGGATGCCAGTCAGCCCGGCCGTTTAAGGGCTGTAACTTATTGACTGTATCACGTTATATATAGTCTACAGAAG
GTAAAGCACGAGACGTTGCACGAGACAAATGTGCAACTCCCTTGAAGTAGTACTGTCATATGCTACCCGGTGTTTCTTCT
TAAAAAAAAGGTTACCCGTGAATTATCTTGCACAGCACCAGACGTGACACGATACTATTAGTTTATACTACTA--TATGA
GTGGTAGTACGTACGTGCTTGGTCGTTGAGTCCTTAAAAGTAAAAAAAATTCAATCAACAAGGCCGGCAATTAAGAAAGG
A-----GCAAAGGAGACTGATGTTAAGAGAGTAG-----CAAAGCAGTAC-GTAGGAAGGGAATGGCCGGCCGCGGAGAG
GAGCTGAAGCTGCTGGGCATGTGGGCGAGCCCGTTCGTGGTGCGGGTGCAGATCGCGCTCCGCCTCAAGGGCCTCAGCTA
CGAGTACGTGGAGGAGGACCTGCAGAGCAAGAGCGAGCTGCTCCTGAGGTCCAACCCTGCCCACGCCGGCAAGGTGCCGG
TGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCGGTCATCCTGCGGTACATCGACGAGGCCTTCTCCGGCTCCGGG
CCCTCCCTCCTCCCCGCC---GACCCCTACGGCCGAGCCGTCGCTCTCTTCTGGGCCGTTTTCGTCGACGACACGGTAGG
TGCATACATAATGC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTG----CTACCTCACCCTCACATGGCCGCGTTCATGTA-
-TATACC-GTTTTCA--GTGCAGCTGTTGAAGGCGCGGAGCCAGGCGTTGAGAGGCGAGACGGTCGAAGAGAAGGAGGAG
GGGAGGAAGAAGGCGGCCGTGGCCATGGAAACCTTGGAGGGGGTGTTGATGGAGTCCAAGGCGAGGTTCTTCAGCGGCAG
GGATGTACCCGGCTACCTAGACATCATGCTCGGCGGCCTCCTCGGCTCGATGCGCGCGACGGAGGAGATGTGTGGGCTCC
AGACCTTCGACCCGACCACCACGCCGCTCCTGGCCGCATGGGCGGAGCTCTTCTGCGCGCTGGACGCGGTGGAGCTAGTC
ATGCCGCGCGTCGAGAGGCTCGTCGAGTATGCCGAGGCGATGCAGCAGCCTCGCACCGCCGTGTCCAGCACCACCAACTG
AGGCCTAACAAGCTCGCCTCCGGTCTTCACGCGCGTGTTATTTACTTCTTGTGCA-ATCAGCGTAGCTTGTTCAGAAACT
AATAGTGCTCTCAAATTCTTGTATGGATTATATTTTTTAGTATTTTTTAAAGTTTACTGTTCATCAGGTGCGGATGAGCC
GGGCACCGAATTGAATATCTGACGCTCGTTTTGGCTCTTGGATGCATGCATCCAAGATGAACAGTAAATTCATTTAAAAT
AGTAAAACAAAATATGAATTACTTTGTGATACTAGATACTCAGGTGCATGAAGTCGGTGCCAGTTTCGTGGAGTGTGGAC
ATTTCAATAGCTCTCGGAAAAAAAAGCAAATTTAGGGCTGTAAGTTTACTGTACATGTATTATTTTGACCAATTTTGTCT
TTTTTTTTGCTGTGAACTCCTCGGATGTCTGAACCGCACCGCCGTGTCCAGCACCAACCGAGAGCAGATGAGCTCTGCGC
GTAGTCTGTTTGTTCTGCAAATGAGGGTGGCTTGTCAAGAAAATAATGCTCTCATTTTGTATGGATAAATATATATTAAA
GAAACAGTAAAATGGGGCTAGCTACGCCTCGGCTCAGCATTTTGACGCTATCATCCGTCCGATCATAGTCACAAGCGGCT
CAGATCTCCTAGTCCTCCCGCAACATCAATATGCGCCTGGGTTACCGAGCCACTTTGCACGACTCAGGCAGACCAAACAA
CTTGAAAGGGCTGCTGCTCCACAGACCGATCTGGATGTGCTCACGTTAACCGGGCTTTCACGTAACTAGATGACCTGTCG
CGCCATTTGGCGCGCGAGACAAATTTGAAGCAAGAACTAAAAGACTACTTTATTTTTTTTCTAGCAGACAATGTTGATGT
ATACTCTTTTGTGAAGTGTCGTGGATCTGCATAAAAATATTTTTTTCTCATTTGTAATGTCGTGCTCAAATTTTTTATTC
AAATGGCAAGCAAATAAATTTCTTTACTTAGGCTGGAGGCTT
>chr5A_4
---TGATGGATCCATCCTGGGATGAGCCGACGATATCCACC-CGACGCGGTTGCGGTGCCCGGACTGGTC---CACCGTA
CGGGGCGTCGGAGAATACGACTCCACCTCGCCAACATCCACCGTTGTGAGGGCTACAACCATCTCCCGTGCCCGCTACCT
CGCACGA-GGGCACACCGCACTATGTTTGCGTTGGACGACGCCCATGCGTTCACCTCCTGCCTGGCGCGCCAACGAAGGG
GTTGCGCGTCCGCCACCGCATTCGGACGCTAGACAGACCGCACTGCCTCTGGTGAGGCAGCGGCGACACACCTC--GCGG
CGGATCAATGCGCCATTTCGGCGAACACAATGGGTTCCTGACAAAAGGGCTCCGAGCGCTGTCGTCGGGC-GGCCTCCTC
TCGGGAGCGGCGGAGCGCAAGC-GGACGATCATCTCCTCCTCGGGGCCGCGTGGGATGAGCTCGAGGTCGACAAGTCTGG
AGGTGTAGGACTCAGATCCGCTGCTCTCCATGCCGAAGAAGGCCGGAGATCGCCGGGCGGGAGCTTGGTTGGCGGAGTGG
AGTGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr1D_4
---TGATGGATCTGTCCTGGGACGAGTCGGCGACATCCACCACGACGTGGTTGCGGCGCCCGGATTGCTG---CACCATA
TGGGGCGCCGGAGAATGTGACTCCGCCTCGCCGACGTCCACCGCCACGAGGGCTGCCGCCGCCTCCTGCGCCCGCTGCCT
CGCACGACGGGCACGCCGTGCCATGTTTGCATCAGATGACGCCCATGGCGCGTCCATGGCCTTGGCATTCCAACAAAGGG
GTTGCGCATTCGCCACCGTGTTCGGACGTTAGACGGACTGCACCGCCTCCGGTGAGGCAGTGACGGCACACCTA--GCGC
TGGAT-CATCCGTCATTTGGGCGGACGCAATGGATTCCCGACGGAAGGAGTCCGAGCGCTGCCTC-GCACGGGCCTCCTT
CTGGGATCGGCGGAGCGCAAGCCGGACGGTCATCTCCTCCTCAGGGCCGCATGGGATGAGCTCGGGGTCGACAGATCTGG
AGGTGAATGACTCGGATCCGCTACCCGCCATGTCGGAGGCAGCCGAAGATCGCTGGATGGGAGCTTGGGTGGCGGAGGGG
AGTGGAGT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr2D_4
---TGATGGATCCATCATGGGACGAGCAGGTGACCTCTACCACGACACGGTTGCGGCGCC-GGATTGGTG---CACCAGA
CGCGGCGCCGGAGAATGCGACTCCGCCTCGCCGGTGCCCACCGCCGAGAGGGCTGCCGCCGCCTCCCATGCCCGCTGCCT
CGCACGGCGGGCGCGCCACGCCTTGTTTTCGTCCGACGACGCCCATGGTGCGTCCATGGCCTTGGCATGCCAATGGAGGG
GTTGCGCGTCTGCCACCGCATTCAGACGCCAGACGGACCACAGTGCCTCCTGTGAGGCAGCGACGGCACACCTT--GC--
TTGATCCATGCGCCATTTGGACGGACGCAATGGATTCCCGATGCAAGGAGTCCGAGCTCTGCC-T-GCACGGGCCTCCTC
CCGGGAGTGGTGGAGCACAAGCCGGACGGTCATCTCCTCCTCGGGGCCGCGTGGGATGAGCTCAAGATCGACGAATCTGG
AGGTGAATGACTCGGATCTGTTGCCCGCCATGCCGGAGATGGCTGGAGATCGCCGGACGGGAGCTTAGGTGACGGAGGGG
AGTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr6B_4
---TGATGGTTTCGCCCTGGGATGAGCCAGCAACATCGACCATGACACGGTTGCGGCGCCTCGAGTGGTG---CACCATA
TGGGGCACCGGAGAATGCGACTCCACCTCAACGACGTCCACCGATGTGAGCGCTGTCGCCGCCTCCCGCGCCCACTGCCG
CGCACGGCGGGCACGCCGCACCATGTTTGCGTCGGACGACACCCACGATGCGTCCATGGCCTGGGCGCGCTAACAGAGGG
GTTGCGGGTCTGCCACCTCGTTCGGATGCCACACGGACCGCTCCGCCTCTGGTGAGGCAGCAATTGCTGCCCTAGCGC--
TGGACCCATGCGCCATTTGGGCGAATGCAATGGATTCCTGACTGAAGGAGTCCGATCGCTGTCGT-GCATGAGCCTCCTC
CCGGGAGCGGCGAAGCGCAAGTCGGACATGCATCTCCTCCTCGGGGCCGCGTGGGATGAGCTCGGAGTCGACGGATCTGG
AGGTGAAGGACTCGGATCCTCTGCCCGCCATGTCAGAGACGGCCAGACGCCGCCGGAGGCGAGATTGGGTGGCGAAGGGG
AGTGGAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr2B_4
---TGATGAATCCATCCTGGGATGAGCCG--GACATCCACCACGACGCGGTTGCGGCGCCCAGACTGCTG---CAACATA
TGGGGCGCCGAAGAGTGCGACTCCGCCTTGCCGACGTCCACCGCCGCGAAGGGTGCCGCCGCCTTCCGC------TGCCT
CACATGGTGGGCACGTCATGTCATGTTTTTGTCCCACGACGCCAATGGTGTGTCCTGCTGCTTGGCGTGTCAACGGAGGG
GTTGCGCGTCCACCACCGCGTTCGGACACCAGATGGACCGCACTGCCTTTAGTGAGGCAGCGACGGCACACCTAGCGC--
CGGATCCATGCATCATTTGGGCGGACGCAATGGATTCCCGACGGAAGGAGTCCGAGCGCTGCCTC-GCACGGGCCTCCTC
CCGGGAGCGGCGGAGCGCAAGCCGGACATCCATATCCTCCTCGGTGCCATGTGGGATGAGTTCGGGGTCGACGGATCTGG
AGGTGAAGGACTCTGATCCGCTGCACGCCATGCCGGAAATGGCCCCAGACCACCGAAGGTGAGCATGGGTGGCGAAGGGG
AATGAAGTGAAGTGGCTAGGATTTGGTCTG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------
>chr4D_4
---TGATGGATCCGTCCTGGGATGAGCCGGCGACGTCCACCACGATGCGGTTGCGGCGCCCAGACTGCTG---CACCATA
CGGGGCGCCGGAGAATGCGACTCTGCCTCGCGGACATCTACCGCCTCGAGGGCTGCCGCCGCCTCCCGCGCCCGTTGCCT
CGCACGACGGGCACGGCGGGTCATGTTCTCGTCGGACGAGGCCCATGGTGTGTCTTGATGCTCGGCGCGCCAATAGAGGG
GTTGCGCGTCCGCCACCGCGTTCGGACGCTAAACGGACCGCACGGCCTCCGGCGAGGCAGCGATGGCACACCTAGCGC--
CGGATCCTTGCGCCATTTGGACGAACATAATGGATTCCTGACGGAAGGAGTCTGAGCGCTGCCGG-GCACGGGCCTCCTC
CCGGGAGTGTCGGAATGCAAGCCGGATGGCCATCTCCTCCTCGGGGCCGCGTGGGATTTGCTCGGGGTCGATGGATCTGG
AGGTGGAGGACTCGGATCCACTGCCCGCCATGCCGGTGACGGGCGGAGACCGCCGAAGATGAGCTTGGGTAGCAAAGGGG
AGTGGAGTGAAGTGGCTAGGGTTTGGTCCGAC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------
>chr2D_6
-----ATGGATCTATCCTGGCACGAGTCGGCGACATCCACCACGACACGGTTGCGGCGCCCGAACTGCTG---CACCGTA
CGGGGCGCCGGACAATGCGACTCCGCCTCGCTGACGTCCACCGCCTCGAGCGCTGCCGCCGCCTCCCACGCCCGCTGCCT
CGCACAGCGGGCACGCCGCGCCATGGTTGCGCCGGACGACGCCCACGGTGCGTCCATGACCTCCGCGCGCCAACGGAGGG
GTTGCACGTCCGCCACCGCATTCCGATTCCTGACAGACCGCACCACTCTTTGTGAGGTAGCGACGGCTGGCCCAGCGC--
CGGATCCATGCGCCATTTGGGCGGACACAATCGATTCCCGGCGGAAGGAGTTCGAGCGTTGTCAT-GCACGGGCCTCCTC
TCGGGAGTGGCGGAGCGCAAGCCAGACAACCATCTCCTCCTCGGGGCCGCGTGGGATGAGTTCGGGGTTGACGGATTTGG
AGGTGAAGGACTCAGATCCGCTACCCATCATGCCGGAGACGATCGGACGGCACCGAAGATGAGCTTGGGTGGCGGAGGGG
AGTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr3D_10
---------ATCAGTCCTGGGACGAGCCGGCGACATCCACCACGACACGGTTGCGGCACCCGGACTGGTG---CACCATA
CGGGGCACCGAAGAATGCGACTCGACCTCGCCGACGTCCATCGCCGCGAGGGCTGCCGCCGCCTCCCACGCCCGCTGCCT
CGCAAGGCGGGCATGCCGCGCCATGTTTGCATTGGACAATGTCCATGGTGCGTCCATGGCTTCAGTGCGACAATGGAGGG
GTTGCGCGTTCGCCACCGCGTTCGGATGCCAGACAGATCACACCGCCTTTAGTGAGGCAGTGACGACACACCTAGCGC--
CGGATCCATGCGCCATTTGGGCGGACGCAATGGATTCCCGACGGAAGGAGTCCGAGCGCTGCCTC-GCACGGGCTTACTC
CCCGGAGCGGCGGAGCGCAAGCCGGACGACCATCTCCTCCTCGGGGCCACGTGGAATGAGCTCATGGTTGTCAGATCTGG
AGGTGAAGGACTCGAATCCGTTGCCCGCAATGCTGGAGAAGGCTGGAGATCACCGGACAAAAGCTTGGGTGGCGGAGGAG
AGTGGAGCGAAGTGTCTAGGGTTTGGTC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr5A_774
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CTACCCGGCGTTTCTTCT
TT--AAAAAGGTTACCCGTGAATTATCTTGCACAGCACAAGACGTGACACAATACTATTAGTTTATTCTACTA--TATGA
GTGATACTTG-----------------------------GTC--AAAAGATCAATCAACAAGGCCGGCAATTAAGAAAGG
A-----GCAAAGGAGACCGATGTTGAGAGAGTAG-----CAAAGCAAAGCAGCAGGAAGGGAATGGCCGGCTGCGGAGAG
GACCTGAAGCTGTTGGGCATGTGGGCGAGCCCGTTCGTGGTGCGGGTGCAGATCGCGCTCCGCCTCAAGGGCCTCAGCTA
CGAGTACATGGAGGAGGACCTGCAGAACAAGAGGGAGCTGCTCCTGAGGTCCAACCCTGCCCACGGCGGCAAGGTGCCGG
TGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCCGTCATCCTGCGGTACATCGACGAGGCCTTCTCCGGCGCCGGG
CCCTCCCTCCTCCCCGCCGACGACCCCTACGGCCGAGCCGTCGCTCTCTTCTGGGCCGTTTTCATCGACGACACGGTAGG
TACATATTGCTTGAG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TA----CTACCTCACTCTCACATGGCCGCGTTCATGTA-
-TA---CCGTTTTCAATATGCAGCTGTTGAAGGCGCCGAGCCAGGCGTTGAGAGTCGCGACGGGCGAGGAGAAGGAGGAG
GGGAGGAAGAAGGCGGCCGCGGCCATGGAAACCTTGGAGGGGGTGCTGAGGGATTCCGAGGCCAAGTTCTTCAGCGGGAG
GGACTGCCCTGGTCTCGTGGACGTCATGCTCGGCGGCCTCCTTGGCTCGATGCGCGCATCTGAGGAGATGGGTAGGCTCC
AGACCTTCGACTCGACCACCACCCCGCTCCTGGCCGCTTGGGCGGAGCTCTTCTGCACGCTGGACGCGGTGGCGCCGGTC
ATGCCGCGCGTGGAGAGGCTCGTTGAGTATGCCGAGGCGATGCAGCAGCCTCGCACCGCCGTGTCCCGCACCACCAGCTG
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr5B_821
GCAAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CACGAGACGTCACACGATATTATTATATAATGTATGAGACTATGA
GTGGTAGCAGGTACGTGCTTGGCCGGCAA----TTTAAAGTC--AAAAAATCAATCAACAAGGCCGGCAATTAAGAAAGG
A-----GCAAATGAGCTCGATGTTGAGCGAGTAGC----CAAAGCAAAGCAACAGGAAGGGAATGGCCGGCTGTAGAGAG
GAGCTGAAGCTATTGGGCATGTGGGCGAGCCCATTCGTGGTGCGGGTGCAGATCACGCTCCGCCTCAAGGGCCTCAGCTA
CGAGTACGTGGAGGAGGACCTGCAGAACAAGAGCGAGCTGCTCCTGGGGTCCAACCCTGTTCACGGCGGCAAGGTGCCGG
TGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCGGTCATCCTGCAGTACATCGACGAGGCCTTCTCCGGCGCCGGG
CCCTCCCTGCTCCCCGCCGATGACCCCTACGGCCGAGCCGTCGCTCTCTTCTGGGCCGCATTCGTCGACGGCACGGTAGG
TCCATATTGCTTATTACTCTCCCTGTTTCTTAATACTCCCTCCATCCAAAAAATATTTGTCATCAAAATGATTAAAAATA
GTTGTATCTATCCCTTTTATTCATTTTGATGACAACTATTTCCGAACGGAGGGAGTATAAGTCTTTGTAGAGATTCCACT
AAATGGACTACATACGGAGCAAAATAAATGAATCTAAACTTTAAATGCATCTATATACATCTTTATGCGATTTACAGTAA
AATCTCTATAAAGACTTACATTTAGGAACGGAGGGAGTAGTTA----CTACTTAACCCTCACATGGCCAAGTTCATGTA-
-TA---C-GTTTTTA--ATGCAGCTGCTGAAAGCGCGGAGCCAGGCGTTAAGAGGCGAGACAGGCGAGGAGAAGGAGGAG
GGGAGGAAGAAGGCGGCCGCGGCCATGGAAACCTTGGAGGGGGTGTTGAGGGAGTCTGAGGCCAAGTTCTTCAGCGCGAG
GGACGGCCCCGGTCTCGTGGACGTCATGCTCGGCGGCCTCGTTGGCTCGATGCGCGCGACGGAGGAGATGTGTGGGCTCC
AGACCTTCGACCCGACCACCACGCCGCTCCTGGCCGCATGGGCAGAGCTCTTCTGCGCGTTGGACGCGGTGGCGCCGGTC
ATGCCGAGTGTCCAGAGGCTCGTCGAGTATGCCGAGGCGATGCAGCAGCCTCGCACCGACGTGTCCAGCACCACCAACTG
AGGCCTACCAAGCTCGCCTTGGGTCTTCACGCGCGTGTTTTTTTATTTCTTCTGTGATCAGTGTATTTTGTCAAAAAAAT
AGCAGTGCTCTCGAATTA-TGTATGGATCAAATTTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr5D_826
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GCACGAGACGTCACACGATGTTATTATATAGTGTA--------TAA
GTGGTAGCAGTACCGCGCTTGGTCATCGAGTCCTTTGAAGTC--AGAAAATCAATCAACAAGGCCGGCAATTAAGAAAGG
AAAGGAGCAAAGGAGACCGATGTTGAGAGAGTAGCAAGGCAAAGCAAAGCAGTAGGAAGGGAATGGCCGGCTGCGGAGAG
GAACTGAAGTTGCTGGGCATGTGGGCGAGCCCGTTCGTGGTGCGGGTGCAGATCGCGCTTCGCCTCAAGGGCTTCAGCTA
CGAGTACGTGGAGGAGGACCTGCAGAACAAGAGCGAGCTGCTCCTCAGGTCCAACCCTGTCCACGCCGGCAAGGTGCCGG
TGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCGGTCATCCTGCGGTACATCGACGAGGCCTTCTCCGGCGCCGAG
CCGTCCCTCCTCCCCGCCGACGACCCCTACGGCCGAGCCATGGTTCTCTTCTGGGCCGCTTTCATCGACGACACGGTAGG
TGCATACATGTTGC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTGAGTACTACCTCACCCTCACATGGCGGCGTGCGTTCAT
GTATACC-TTTTTCA--GTGCAGCTGTTGAAGGCGCGGAGCCAGGCGTTGAGAGGCGAGACGGGCGAGGAGAAGGAGCAG
GGGAGGAAGAAGGCGGCCGCGGCCATGGCAACCTTGGAGGGGGTGTTGAGGGAGTCCAAGGCGAGGTTCTTCAGCGGCAG
GGATGGACCCGGCTACCTGGATATCATGCTCGGCAGCCTCCTCGGCTCGATGCGCGCGACGGAGGAGATATGTGGGCTCC
AGACCTTCGACCCGACCACCACGCCGCTCCTGGCCGCATGGGCGGAGCTCTTCTGCGCGCTGGACGCGGTGGAGCCGGTC
ATGCCGCGCGTGGAGAGGCTCGTCGAGTATGCCGAGGCGAC---GCAGCCTCGGACCGCCGTGTCCAGCACCACCAACTA
AG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr5D_1091
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CTTAGCCA
CGAGTACGTGGAGGAGGACCTGCAGAACAAGGGTGAGTTGCTCCTGAGGTCCAACCCTGTCCACGGCGGCAAGGTGTCGA
TGTTCATCCACAACGGCAAGCCTGTCTGCGAGTCGTCCGTCATCCTGTGGTACATCGACGACGCCTTCTCCGGCGCCGGG
TCCTCCCTCCTCCCCGCCGACGACCCCTACGGCCGAGCCGTCGCTCTCTTCTGGGCCGCTTTCGTCGACGATATGGTAGG
TGCATACATAATGC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTG----CTACCTCAACC-CAGATGGCCGCGTTCATGTA-
-TATACC-GTTTTCA--GTGCAGCTGTTGAAGGTGCGGAGCCAGACGTTGAGAGGCGAGACAGGCGAGGAGAAGGAGGAG
GGGAGGAAGAAGCCGGCCGTGGCCATGGAAACCTTGGAGTGGGTGTTGAGGGATTCCAAGGCGAGGTTCTTCAGCGGCAG
GGACGAACCCGGTTACTTGGACATCGTGATCGGTGGCCTCCTTGCCTCGATGCGTGCATCGGAGGAGATGGGTGGGCTCC
AGACCA--------------------CTCCTGGCCGCATGGGCGGAGCTCTTCTGCGCGCTGGACGCGGTGGAGCCGGTC
ATGCGGAGCGTCGAGAGGCTCGTCG-GTATGCCGAGGCGATGTAGCTGCCTCGCACCACCGTGTCCAGCACCACCAACTG
AGGCCTA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>SNPs
S-S-------------------S----S-S--------------------S--------S---S--S-SSSSS--S-S-S
----------------------S------S-----------S-----------S-S----------------------S-
---SS--------------------------------------S-----------S--------S-S-------------
----------SS--------------------------------------------------------S-----------
---------------------------------------------------------------------S----------
--S--------S--------------------------------------------------------------S-----
----------------------------------------------------------------------S---------
--------S--S-S------S----S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---------
-SSS----------------------------------S---------------------------S-------------
---------S----------------S--------S-----SSS-----S------------------------------
-----------------S------S---------------------SSS----------------------S--------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S---S------------
-------------------------------------------------S------------------------------
-----S------------S-------------------------------------------------------------
---------------------------------------------------------------------------SS---
--------------------------------------------------------------------------------
-------S-----------SS------------------S---SS--SS-SSSSS------S---SS----SS-S---S-
-SS---------S----SS---------S-S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_602
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTGCTCTGACACGACGAACA--------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>reverse_2682
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------TTGACGCTATCATCCGTCCG-------------------
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