>input_sequence_68993
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--------ATGGATGCCAAGAAGTTCCTGCAGATGGTCGAAGACAAGAAGAAGAGACTCCTCGAGAAGAAGGAAGCCCCA
CTGAAATGGCAGCAGAAACTGGAAGCGGCAATTAAGGCCACTGAAGAGAAGGAGAAGAAGCTCAAGTCAAAAAAGCACAG
GAGGCGAAGCTATTCTTCCTCAGAATCTGACAGTGAATCCGAGAGCGACAGCGATCGGAAACACAGGAAGAGGAAGGACC
GCAGAAGGCACAGGAAACATGGCCACTCTGACTCTGATGGTGCCAGGAGGCGCAAGCACAGGTCAAAGAGGAGGAGCTCA
GACTCTAGCGATGAGAGCGACAGTGATGAATATGATAGCGAATCTGAAGAAGAGCGCCGAAGGAAGAAGCACTCGCACAG
GAGGAAGCATCGCCGTCACTCTTCAAGGTCAGAGTCTGATGCTTCAGATTACAGCAGCGATGATGATGAGCGAAGGTCAA
CCAGGAAGGACCACACTAGGAGCCGGAGGCGCCGCCACCGATCATCAGACGATGAATCCGAGGACAAGATCAGGTCAAGG
CATAGGAAGCGC---CACAGATCAAGTGACGAGGACAAGCCATCAGATTCTGACAACCATAAGCGCCACAGGAGCCGCTC
TCTGTCCTTGGATGATGGAGCTGCCGGTGAGCCAGACAAGATGAATGATGGCAAGGGGTCTCACAAAAGCAGACACCCCC
GCCGCCACCACCATCACCATCATGATCACCATGCCAACTTTGCTGAACCCAGTGACGGGAAGCAACTCGTGTAA------
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>chr3A_1_TraesCS3A01G024900
GATTTACCCTGACCGGAATTGTGGTTCTTGCAGGCGAATTTGGGGCTCAGGAAAGAGGAGGAGCGACTTCTCTCTG----
-GTGGTCGGAAATTCAGGACAAGGTAAGAAAGTGTATAATATGCCTGCACCTACCGCAATCATTGGATCTGTTGGTGCTT
----ATGCGTGGCTGAGTCATGCATGCATGCGCTGTACTTCTGGTAGTGCCAGCTGCAGTTGTATTCCCTCTAGCTGCCT
GGTGGTGGTCAGCGCTTGCTTGGTTTAGTTTGTTTGAACTGCTGGCAAAAGCCTGGATTGTTGTTCTGTTGATT------
---------GATCTGGCGAAAGC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTGAACCTTTAAGCTACTGTTTTGATACT-AAGTGGATTACAGGAATCAGTTTGGTACTATTTCTG
TGTAGCCTTAGCTTTAAACGAGTCTCACTTTCTTATGGTCACTTGTATTTGCCGATTTCAAGCATTTT-CTTCAGGGAAA
GAAAATATCAC-----TAGTCCCTTGATTTCTTCCCTTTTACAGTTTGAGAATTGGGATTACATTCGAATTTTAAACTGA
TGCAAC-TATGCGTAATAATCAACAGACCTTGTCACATGTGTCATGTTAATTAGTC--------------------AGCA
GTATATGTTTTTGGTAGGATCTGAATGGTTAGCGCAGTTTGGAACCTTTAAGCTACTGTTTTGGTGTTAAGCGGATGTCA
TGTATCAGTTTAGTGCTACTCTGGTGTTAATCTTTTCTTAGACATGCCACATTCTGTAAAGTATTTGTTGGTTGTAAGGA
TTTAGCTTCACTATGCTTTGAAATGCCTGATATTAGATGTCATTTGGTTGCC-AAATATC---TTTGTTTCAGTTGTCTA
AAGCTATTGC-TCTGCTTACTGATTTGATTTACACACTTCTTCTCTAGCTTGCTAGATAATCCTAGATGTTCAGTAAACT
AACAGTGTTTTTCTCTCTTCTATGAGATGCACTTCCTTGCATCATTTCACGGCCCTGCAGGTTTTGAGCTTTTGTCTGTT
TCGCTGGGATGGATGCCAAGAAGTTCCTGCAGATGGTCGAAGACAAGAAGAAGAGACTCCTCGAGAAGAAGGAAGCCCCA
CTGAAATGGCAGCAGAAACTGGAAGCGGCAATTAAGGCCACTGAAGAGAAGGAGAAGAAGCTCAAGTCAAAAAAGCACAG
GAGGCGAAGCTATTCTTCCTCAGAATCTGACAGTGAATCCGAGAGCGACAGCGATCGGAAACACAGGAAGAGGAAGGACC
GCAGAAGGCACAGGAAACATGGCCACTCTGACTCTGATGGTGCCAGGAGGCGCAAGCACAGGTCAAAGAGGAGGAGCTCA
GACTCTAGCGATGAGAGCGACAGTGATGAATATGATAGCGAATCTGAAGAAGAGCGCCGAAGGAAGAAGCACTCGCACAG
GAGGAAGCATCGCCGTCACTCTTCAAGGTCAGAGTCTGATGCTTCAGATTACAGCAGCGATGATGATGAGCGAAGGTCAA
CCAGGAAGGACCACACTAGGAGCCGGAGGCGCCGCCACCGATCATCAGACGATGAATCCGAGGACAAGATCAGGTCAAGG
CATAGGAAGCGC---CACAGATCAAGTGACGAGGACAAGCCATCAGATTCTGACAACCATAAGCGCCACAGGAGCCGCTC
TCTGTCCTTGGATGATGGAGCTGCCGGTGAGCCAGACAAGATGAATGATGGCAAGGGGTCTCACAAAAGCAGACACCCCC
GCCGCCACCACCATCACCATCATGATCACCATGCCAACTTTGCTGAACCCAGTGACGGGAAGCAACTCGTGTAAGTTGCT
AA--TGCCTCAGAACCTGATTGGCATCTTCACTGGACTCTGTGACGGCAATGTTTGCTTGCCCCAGTTGGCCAGTTGCTG
AATGAAGGCGATGTATCTTTCATAATGTTACTGTCTC-GGCTCTGCTGCGGCTTTCTGAAGCCTGTACTTGTTGTACCGA
AACATTTGGCGAAACCAGATGTTATTTCCAGCGTTTCCTCTGTTGTCATATGT-TTGCTTGCTGATTTGGTGGTTAAACA
TGCCTGTTTCATTTGCTGCAAGTTCACTATTGCATTTTTGTTTGTTGAGCCATACTACGG-TGGATCATATGCTGCTATG
TCTACACATTTTTTGCGGGATACTAGCTACGCGTACACATTTTTTTGTGGGATACAAGCATTCTGTGGCGGTGCAGCAGA
GAACTATGAAACACTATGTTTCAGTTGGGGCTAGAGCTTTTCTGTTTGATTGTTTGAATGCTTGTCATACTCCAAGAAGA
ACGC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CCAAAAACCTTTT
GTTGTGGCCTACCTATATCACCTTCATATTGGAA-------------ACCTCTACTCAATGT--GTATCTGTCATAATCT
ACCATATGAGCAAGTGATGTAATCGTGACATATCCACACCTACAAACAACCTTTACAAAGAGAACGAAGAGAGTG--CAA
ACAACACATCCTGGTAGTACACAAGAGATGCCTTCAACTGATATCATATAAGTTCAACAGTGCAGCAAAGTGTACTGGTA
GTTGCTACACGCTCTCCACATAACTCAGCTTAGCATATCTATAT------------------------------------
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------------------AATGAATAAATGCATAGGTCAATTCAAGATTACGCGTATGTTGCAACCCGTGGCTTAAA-GG
GGAATGGGGGCGAGGAAAAGCATGGTGACAAGGTCCTTCACATGGCTACCAAAGGTGTAACCGTCCCTACCGCGGAGGTA
GATGACCTCGTTCGACCTTGCTATGTTCACCACCAGTTGCGCCGCTGGCAATAACACACGGTCCATCGCCATGCACGCCT
GGTTCATCGTCCTC
>chr3D_2
-ATTTACCCTGACCGGAATTGTGGTTATTGCAGGCGAATTTGGGGCTGAGGAAAGAGGAGGAGCGACTTCTCTCTGCTCT
GGTGGTTGCAACTTCAGGACAAGGTAAGAAAGTGTATAATATGCCTGCACCTACCGCAATCATTGGATCTGTTAGTGCTT
ATGAATGCGTGGCTGAGTCATGCATGCATGCGCTGTACCTCTGGTAGTACCAGCTGCAGT--TATTCCTACTAGCCGCCT
GGTGCTAGTCAACTCATGCTTGGTTTGGTTTGTTTGAACTGCTGGCAAAAGCTTGGATTGTAGTTCTCTTGTGTGGTCTT
CGAGAATAAGCTATATATAGGGAAAAAAAGATTTATAGCTTCCTTCGAGATTTCTGAACTTCAAAGGTTAAGAATTGGAA
TCGCGTTCAAGTTTAAACTGACGCGATAGAAAGCATT----ATTCTATAGACCAGTAACTACTAACAAGCTTCATCACAT
ATAGGTC--ACTTGTTATTCTTGTGAGTTGTTACTAGAGACGCAGAACAAAATTTGGCTCACATATTTCTGTCTGCTCTG
AATGTTTAGCAGTTTTGAACCTTTAAGCTATTGTTTTGATATT-AAGTGGATAACATGAATAAGTTTGGTACTATTTTGG
CGTTGCCTTAGGTTTAAACGAGTCTCACTTTCTCATGGTCACTTGTATTTGCCGATTTCAGGCATTTT-CTTCTGGGAAA
CAAAATATCA-----GTAGTCCCTTGATTTCTTTCCTTTTACAGTTTCATAACTGGGATTACATTCGAATTTTAAACTGA
TGCACTATATGCGTAAAAATCAACAGACCTTGTCACATGTGTCAGGTTAATTAGTTTGTTTGTGTATAGTTACCACATCA
GTATATGTTTTTGGTAGGATCTGAATGGTTAGCGCAGTTTGGAACCTTTAAGCTACTGTTTTGGTGTTAAGCGGATGTCA
TGTATCAGTTTAGTGCTACTCTGGTGTTAATATTTTCTTAGACATGCCACACTCTGTAAAGTATTTGTTGGTTGCAAGGA
TTTAGCTTCACTATGCTTTGAAATGTCTGATATTAGATATCATTTGGTTGCCAAAATATC---TTTGTTTCAGTTGTCTA
AAGCTATTGC-TCTACTTACTGATTTGATTTACACACTTCTTCTCTAGCATGCTGGATAATCCTAGATGTTCAGTAAACT
AACAGTGTTTT-CTCTCTTCTATGAGATGCACTTCCTTGCATCATTTCACGGCCCTGCAGGTTTTGAGCTTTTGTCTGTT
TCCCTGGGATGGATGCCAAGAAGTTCCTGCAGATGGTCGAAGACAAGAAGAAGAGACTCCTTGAGAAGAAGGAAGCCCCA
CTGAAATGGCAGCAGAAACTGGAAGCGGCAATTAAGGCCACTGAAGAGAAGGAGAAGAAGCTCAAGTCAAAAAAGCACAG
GAGGCGAAGCTATTCTTCCTCAGAGTCTGACAGTGAATCCGAGAGCGACAGTGATCGGAAACACAGGAAGAGGAAGGACC
GCAAAAGGCACAGGAAACATGGCCACTCTGACTCTGATGGTGCCAGGAGGCGCAAGCACAGGTCAAAGAGGAGGAGCTTG
GACTCTAGTGATGAGAGCGACAGTGATGAATATGATAGCGAATCTGAAGAAGAGCGCCCAAGGAAGAAGCACTCGCACAG
GAGGAAGCATCACCGACACTCTCCAAGGTCAGAGTCTGATGCTTCAGATTACAGCAGCGATGATGATGAGCGGAGATCAA
CCAGGAAGGACCACACAAGGAGCCGCAGGCGTCGCCACCGATCATTAGACGATGAATCTGAGGACAAGATCAGGTCGAGG
CATAGGAAGCGT---CACAGATCAAGTGACGAGGACAAGCCATCAGATTCTGACATCCATAAGCGTCACAGGAGCCGCTC
TATGTCCTTGGATGATGGTGCTGCTGGTGAGCCAGACAAGATGAATGATGGTAAGGGGTCTCACAAAAGCCGGCACCACC
GCCGCCATCACCATCACCATCATGATCACCATGGCAACTCTGCTGAACCCAGTGACGGGAAGCAACTCGTGTAAGTTGTT
AA--TGCCTCAGAACCTGATTGGCGTCATCACTGGGCTCTGTGACGGGAAGGT----TTGCCCCAGTTGGCTAGTTGCTG
AATGAAAGC-ATGTATCTTTCATAATGTTACTGTCTC-GGCTCTGCTGCGAC-TTCTGAAGCCTGTACTTGTTGTACTGA
AAAATTTGGCGACACCAGATGTTATTTCCAGCATTTCCTCTGTTGAGACATGGCTTGGTTGCTGATTTGGTGGTTAAACA
TGCCTGTTTCATTTGCTGCAAGTTCACTTGTGCATTTTCGTTTATTCAGCCATACTACGTTTGGATCATATGTTGCTAAG
TC--CACATTTTTTGCGGCGTACTTGCCATGCGTACACA-TTTTTTGTGGGATACAAGCATTCTGTGGCGGTGCAGCAGA
AAAGTACGAAACAC--TGTTTGGGTTGGGGCTAGAGCTTTTCTGTTTGAATGCTTGCCATGCTTTGTTTGAACGACGATT
GTATGAACAAACAACAAAACTACTGTGTGGACGACGATGATGGAGGATTGAACGGTGCATAATTTTACAGCTTATGTTCT
GCACAGTTAGAAAATCATTAAGAATTTGTTCTGGTCATAGCAGCGTTCAACACACAATGGACGACAATGATGGAGGATTG
AACTGTGCACATTTTTCCGGCTTGATGTTCTTCACTGTTAGAAAACCATTAAGAATTTGTTGTGGGCATAGGAGCGTTCA
ACAAACAATTAGACCGACAACAACCCTAGCGTTTGTACCAAATATAAATTCCGCTCCCCTTCCCACACCAAAAACCATTT
GATGTGGCATCCCTAGATCACCTTCATATTTGGAACAGTGTGGTTTTACGTCTACTCAATGTGCGTACCTGTTATAATCA
ATCATATGAGCAAGTGATATAAGAGTGACATATCCACACCTATAAACAACCTTTTTTACAGAAGAAAGAAAAGACTACAA
ACAACACATCCTGTTAGTACACAAAAGATGCCTTCAATTGATATCATAAAAGTTCAACAGCGCAGCAAAGTGCAGTAGTA
GTTGCTACACGCTCTCGACATAACTCACCATATGGCTACAGCGAACTGACCCCTCCCGGCCATGGTCGGAGTTCGACATT
GAGGTCCCCACGAGCTCCAGACAGCTCTTTCAGGCGGCGACACGCTAGGAGATCGGAGATGGACGGCGTGCCAAATTCTG
GGAAGACAGATGGCTTGACGGCTTTAGGGTGCAGGAGCTGGCACCGACGATCTATGACATGATACAGCCATCCACCAGGA
CAGAGAGGATAGTGGTACAGGCCTTGACGAACTCGACGTGGGCTAGAGACGTTGGTCGGAGCTCTCGGCGCAGGCACTTC
ATAAGTACATGATCCTTTGGGACCGCCTAGCTCACACCCACCTGAACCATGAGGCCATGGACTCAGTTACGTGGGCCTGG
GAGAAGAGTGGCGAATACTCGGTCAGATCGGCCTACCAAGCAAGATTCATGGGACGCGAGATCATTCCCACGGCAGACTT
CACTTGGAAATCGAGGGCACCGCTGAGATGCCGCTTCTTCGCTTGGATAGCTCTGCAGAACAGATGTTGGACCTCAGATC
GACTTGCCAGGCACGGACTTGACCACCAGGAGGCATGCCCTTTCTGCGACCAGCATGAAGAGAGCATCGACCACATTCTA
CTCCACTGTGTCTTTGCACGACAGGTTTGGTCCATCATTTGTACGGCGATGAACAAGCCCAACTGGACACCTCGACAGGG
ATCATCACTTTCGGACTGGTGCATCACCACTCAAGACCTGGGCAGGAGGACCAAGGATGGTAGGGCTGTCTATCTCCGGA
CAATGTGGGAGCTATGGAAGCACCGCAACGCCATTGTGTTCCATGGGGCCTCTCCCTCCATACGTACGATTGTCCACCAC
ATTGAGGACGAGGGGCGTGCTTGGAGCAAAGTTGGGATCCTCAAGGGAGACATAGAGCCTCTATTCGGAGCGCTTAGAAG
GTGGGCGAGCGAGAGTAGTTAGACTAGTTGCTCTTTTTGTGGTGGAGTTGGACCGCATGTAATTCTTGCATGTATGAACC
AACGTGGAGGGGCTCTTTCTCCCCATCCCTTCTTTAATATAAAGTGTGCACACTCGTGCGCATTCGAGAAAAAAATAACT
CAGCATATCATATCCATAAATGAATAAATGCATAGCTT-ATTCAGGATTACGCGTATGTTGCAACCACTGGCTTTAAAGG
GGGATGGGGGCGAGGAAAAGCATGGTGACAAGGTCCTTGACGTGGCTACCAAAGGTGTAACCGTCCCTTCCGCGGAGGTA
GATGACCTCGTTCGACCTTGCTATGTTCACCACTAGTTGCGCCGCCGGCAACAATGCGCGGTCCATATCCATGCATGCTA
GGTTCATGGTCCTC
>chr3B_2
-ATTTACCCTGACCGGAATTGTGGTTATTGCAGGCGAATTTGGGGCTGAGGAAAGAGGAGGAACGACTTTTCGCTG----
-GTGGCCTGAAATTCAGGACAAGGTAAGAAAGTGTATAATATGTCTCCACCTACTGCAATCATTGGATCTGTTAGTGCTT
ATG----CGTGGCTGAGTCATGCATGCGTGCGCTGTACTTGTGGTAGTGCCAGCTGCAGT--TATTCCTACTAGCCGCCT
GGTGGTAGTCAGCGCTTGCTTTGTTTGGTTTGTTTGAACTGCTGGCGAAAGATTGGATTGTTGTTCTGCTGTGTGGTCTT
TGAGAATAAGATATGGCGAAAAAAAAAAAGATTCTTAGCTTCCTTTAAGATCTCCAAACTTTGAAGGTTAAGAACTGGAA
TCTCATTCAAGTTTAAACTGACGTGATAGTAAGAAGGCCTCATTCCATGGACCAGTAACCACTAGCAAGCTTCATCACGT
AATAGGTTTACTTGTTATTATTGTGAGTTGTTACTAGGGACGCAGAATAAAATTTGGCTCACATATTTCTGTATGCTCTG
AATGTTTAACAGTTATGAATCTTTAAGCTACTGTTTTGACATTAAAGTGGATTACATGAATCAGTTTGGTACTATCTTGG
TGTTGCCTTCGGTTTAAACGACTCTCACTTTCTCATGGTCACCTGTGTTTGCTGATTTTAAGCATTTTGCTTCAGGGAAA
GAAAATATTTGTAGTGTAGTCCCTTAATTTATTTCCTTTTACAGTCTGAGAATTGGGATTACATTCGAATTTTAAACTGA
TGCAAC-TATGCGTAACAATCAACAGACCTTGCCACATGTGTCAGGTTAATTAGTTTGTTTGTGTATAGTTACCAGAGCA
GTATATGTTTTTGGTAGGATCTGAATGCTTAGC--AGTTTGGAACCTTTAAGCTACTGTTTTGGGGTGAAGCGGATACCA
TGTATCAGTTTAGTGCTACTTTGGTGTTAATCTTTTCTTAGACATGCGAAGCTCTGTCCAGTGTTTGTTGCTTGTAAGGA
-TTAGCTTCACTATGCTTTGAAATGCCTGATATTAAATGTCACTTGGTTGCCAAAATATAGTATTTGTTTGAGTTGCCTA
AAGCTATTTGTTCTACTTACTGATTTGATTTACGCACTTCTTCTCTAGCATGCTAGATAATCCTAGATGTTCAGTAAACT
AACAGTGTTTTTCTCTCTTCTATGAGATGCACTTCCTTGCATCATTTCACGGCCCTGCAGGTTTTGAGCTTTTGTCTGTT
TCGCTGGGATGGATGCCAAGAAGTTCCTGCAGATGGTCGAAGACAAGAAGAAGAGACTCCTCGAGAAGAAGGAAGCCCCT
CTGAAATGGCAGCAGAAACTGGAAGCAGCAATCAAGGCCACTGAAGAAAAGGAGAAGAAGCTCAAGTCGAAAAAGCACAG
GAGACGAAGCTATTCTTCCTCAGAATCTGACAGTGAATCCGAGAGCGACAGTGATCGGAAACACAGGAAGAGGAAGGACC
GCAAAAGGCACAAAAGACATGGCCATTCTGACTCTGATGGTGCCAGGAGGCGCAAGCACAGGTCAAAGAGGAGGAGCTCG
GGCTCTAGCGACGAGAGCGACAGTGATGAATATGATGGCGAATCTGAAGAAGAGCGCCGAAGGAAGAAGCACTCGCACAG
GAGGAAGCATCGCCGACACTCTTCAAGGTCAGAGTCTGACGCCTCAGATTACAGCAGTGATGATGATGAGCGAAGGTCAA
CCAGGAAGGACCATTCTAGGAGCCGGAGGCGTCGCCACCGGTCCTCAGACGATGAATCTGAGGAGAAGATCAGGTCGAGG
CATAGGAAGCGTCATCACAGATCAAGTGACGAGGACAAGCCGTCAGATTCTGACAACCATAAGCGCCACAGGAGCCGCTC
TATGTCCTTGGATGATGGTGCTGCTGGTGAGCCAGACAAGATGAATGATGGCAAGGGGTCTCACAAAAGCCGGCATCACC
GCCGCCA---CCACCACCATCATGATCATCGTGTGAACTCTGCTGAACCCAGTGACGGGAAGCAACTCGTGTAAGTTGTT
AAAATGCCTCAGAACCTGATTGGCATTTTCACTGGACTCTGTGACGGCAATGTTTGCTTGCCCCAGTTGGCTAGTTGCTG
AATGGAAGCGATGTATCTTTCATAATGTTACTGTCTCCGGCTCTGCTGCGGA-TTCTGAAGCCTTTACTTGTTCTACTGA
AACGTTTGGCGACACTAGATGTTATTTCCAGCGTTTCCTCTGTTGACATATGT-TTGCTTGCTGATTTGGTGGTTAAACA
TGCCTGTTTCATTTGCTGCAAGTTCACTATTGCATTTTCGTTTATTGAGACATACTACGTTTGGATCATA----------
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>SNPs
S-------------------------S--------------------S--------------------------------
-------------------------------------------------------------------------S------
------------------------------------------------------------SS------SS-----S----
------S-------------------S-------------------------S------------------SS-------
------------S---------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------S--------------------SS-
---S-------S---------------------S----------------------------------------------
----------S----------------------S----------------------------------------------
----------------S---------------------------S----------S------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
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--------------S----------------------------------S------------------------------
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---------------------------------------------------S----------------------------
---S---------------------------------------------------------------------------S
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-------------------------------S--------------------------S-----------------S---
-----------S--------------------------------------------------------------------
-S----------------S-----S---------------------------------------------S-S----S--
-------S-------------------------S-----S--------------------------------------S-
-----------------------------------------------------------------------S--------
------S---------------------------------------------S------------------------S--
------------S--------------------------------S----------------------------------
--------------------------------------S----S---------------S------------S-----S-
--SS--------------SS----S--S-S---------S----------------------------------------
S--S--S-------SS-----SS--------------------------S--S---SSSSSS-S-SS-SSSS-S-SS-SS
SSSS----------------------------------------------------------------------------
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----------------------------------------------------------------------------S---
-S------S-S----S--------------S-S----------------S-----------------S----S------S
-S----------------S---SS------------------S-----------SSS-SSSS-SSS-SS-S--SS-----
-------------S----------S------------S----------S-----------S-----------S-S-S---
----------------S----------S-S--SSSSSS-SSSSS------------------------------------
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-----------------------------------S-SS-----S---------------------SS------S-----
--S-----------------------------------S--S--------------------------S-----------
---------------------------------S-----------S-----S--SS-S--------SS-------S--SS
-------S------
>forward_293
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---------------------------------TTGAACTGCTGGCAAAAGCC---------------------------
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>reverse_1524
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---GAAGGCACAGGAAACATGGC---------------------------------------------------------
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>forward_1492
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---------------------------------TGAATCCGAGAGCGACAGC----------------------------
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>reverse_4446
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---------------------------------------------TGGCAATAACACACGGTCCA---------------
--------------
