>input_sequence_68992
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---------------------------------------------------------------------ATGCCAGCTAC
CGGCGAGGGTCCTCGCGCCGCGCAGCCGGCGGCGGCGAGGAGGCCGAGCAGGTACGAATCGCAGAAACGGCGTGACTGGC
AGACGTTCGTGCGGTACCTGGCGGCGCACCGCCCACCGCTCGTGCTGCGCCGGTGCAGCGGCGCCCACGTACTCGAGTTC
CTCCGCTATCTCGACCGCTTCGGGAAGACCCGCGTCCACGCGCCGCCCTGCCCGGCCTACGGCGTACACGCGATAACGGC
GACGGCGCCGTGCCAGTGCCCGATCGGCCAGGCGTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTACGCGCCGCCTTTG
ACGAGCGCTACAGCCGCAGCGGCGGCGCGCCGCCGCAGCAGCAGCAAGACGCCAGTTGCAACCCCTTCGCCGCACGCGCC
GTCAGGCTATACCTGCGTGACGTCCGCGATGAGCAGTCTAGGGCGCGCGGCATCTCCTACCACAAGAAGAAGAAGAAGCG
CAAGCTTGCCACTGGAAGCTGCATCGCGGAGGCCTCGTCCTCCAAGAACGGCGGCTGCGCGGACGCCAACTCGGACGGCG
AACGCGGGCACAAGACTACGATGACGACGAAGGCTAACGTGGCGCCGGTGCCTCAAGCACCGCCACCGCTGCCGCCTCTG
CCGCCATGCCTGGCCGGGGTACCGTTCGAGTGCGGCTCCGACACGGGAAGCATCGTTGGAGGAGGG---GTGTCTACTGG
CGCCGGCTGCTACGGCGGCATATACTTGCCGTTGTTCTTCAACGCATTTAATTAG-------------------------
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>chr2D_1_TraesCS2D01G255200
CCACAAGGCCACATGCAGGCAGCGGCTCCTCCTCTAGCCGCTCGGATCTACACCGTCGGTGGTCCGCCAGCAGATACATG
AATGGCGGTTGGTCGGGCTCGGTGCTAGCCCAAAAGCTCGTCGGCGCACCGTTGCCACTCGTTAAGTGCGACCACTGCCC
AAAGAAGGTCGTGCGCCGCGTGTCTACAACGCCGGAGCATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGTGTAT
GTGCTCTTTTTAGCTTCGGTTTGTGCTCTAGATTT-ACTAGTTGTGCTAACTTCAAATTATATTGTGTAGCATGGATGCA
AGTTTTGGTATATTGGGAAGAAGAGTACATCGATATATTGATAGAGCGCAATTTAGTAGATGTTCGTGCACTTTTAGTTA
GCATAGAGGCTGTAGATGAGAAAAGTGCACTTGTTGCTGGATTAGAGGCTAGACACGAGACTAGATGCGAGGAAGCAACC
TCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATCGAGC---CTCCTCCGCAGATAAACA-TGAATGCATCGA
GAAGGCACTAATCCAATTTACAGGAGCAGTTTTGGGAGTTGGATATCTTTT-AAATGTATTCTTGTGGTTCTTGTTTTTT
---GTCTT----ACTTTTCTAGTCAAAATTTGGTGATGTATTCCCATATACCAAAATTGAATGATGAAAAAAAGT-TAAG
GCCTTGCAAAGAAAAAAGTACGCTGACAGGATACGGCTGGAATGCATCCG-CGCGTTGGGCGCACGGCCACCGCAT-CTC
AGAAACGGTCCGGACACGACTTCATTGTCCTATCCAAACAGACAGAATCCGGACAAAATGGACGTC------AGATCGCG
CGGTGGAGTTGGCGTATAGGTGTCCACTATATATATATACACGCTATTCGATCCATCAACCTTTCTCATCT-AAGTCTCA
TCAGTCGGCGTAGTTGAGTACTGGTACTCTACTAT--TCGTCTGCT----CTGGACCTCTGGTGTGGCTATGCCAGCTAC
CGGCGAGGGTCCTCGCGCCGCGCAGCCGGCGGCGGCGAGGAGGCCGAGCAGGTACGAATCGCAGAAACGGCGTGACTGGC
AGACGTTCGTGCGGTACCTGGCGGCGCACCGCCCACCGCTCGTGCTGCGCCGGTGCAGCGGCGCCCACGTACTCGAGTTC
CTCCGCTATCTCGACCGCTTCGGGAAGACCCGCGTCCACGCGCCGCCCTGCCCGGCCTACGGCGTACACGCGATAACGGC
GACGGCGCCGTGCCAGTGCCCGATCGGCCAGGCGTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTACGCGCCGCCTTTG
ACGAGCGCTACAGCCGCAGCGGCGGCGCGCCGCCGCAGCAGCAGCAAGACGCCAGTTGCAACCCCTTCGCCGCACGCGCC
GTCAGGCTATACCTGCGTGACGTCCGCGATGAGCAGTCTAGGGCGCGCGGCATCTCCTACCACAAGAAGAAGAAGAAGCG
CAAGCTTGCCACTGGAAGCTGCATCGCGGAGGCCTCGTCCTCCAAGAACGGCGGCTGCGCGGACGCCAACTCGGACGGCG
AACGCGGGCACAAGACTACGATGACGACGAAGGCTAACGTGGCGCCGGTGCCTCAAGCACCGCCACCGCTGCCGCCTCTG
CCGCCATGCCTGGCCGGGGTACCGTTCGAGTGCGGCTCCGACACGGGAAGCATCGTTGGAGGAGGG---GTGTCTACTGG
CGCCGGCTGCTACGGCGGCATATACTTGCCGTTGTTCTTCAACGCATTTAATTAGCTTGTTGATAGCTTAGCCTCAAAAT
GCCTCGTGGTGCCCAATTAATGTTCGAGTATAATCGACGTACGGCCAGTGCGTCGTAATAACGTACCCTATGTTACTTTG
CTTATTATTTTGCAGTTGTTCCGTTGGTCTACGTAGGCATTTCGTGTATCATTCAGAGTACTCATGACTCGTGAGAATGA
GATCTA-------------------------------------------------------------------GCTTCCA
ACAAC--GATTTGTGCATGCACCCCAACAAACTAGTTTCCCAACATATTTATAATACTTGTGGTGGAGGTAGATTAAAAG
ATATGTGGACAGATTGCTGCAATTGCTTTGGCATGTGGGCCATGAAGAAACGGTACTGAATCGACTCTTCG-TTACCACA
GTAGCAACACCATCCTTGCTAATTTTATTTTCATAGTCTATCTTTTGTTAGGATGATCTGCCGATCTAAATACAACTTGA
ACATTTTTATTTTTGAAGGAATTTTTATTTTCCAAATATGCTTGTGGTCATTGGCAGATCTAGGGGTGGGGTCATATGGG
GGCCATGGCCCCATACACAAATTACAAAATTTATTTTACTAGTGCACTGTTTGTTCATCATACAAATTTTGATGTAGTGT
AGTTTTTTTTCTAGCAATTGTAATGTTGTTTATTGTTGCCCCCACATTGTCAAGTCCTAGATTCGCCACTGCTTGTGATG
GAAATAAGGATGTCAATGGGTAGGGTATGGGCAGGGTAGAGCAATACCATATCCATACCCGTATAGTCAGTGGGTATAAA
ATTCTACCCATATCCATACCCATGGTATGAAACTTTACCCATACCCATACCCAACGGGTACCCGTATCCATTAGGTACCC
AGCGGGTAGAACAAATAGTACACAGACTGTTCACAATTTTACACTCAATGATAGCACATTTGACAAAAAAACAATTATCT
CAGCTCAATAATAGGGCAGATGAGTATATGACCACTCTCAAAATATAAAAATCACAACATACTCATAAGTCAATAGGTAG
GGTAT
>chr2D_1
CCGCAAGGCCACATGCAGGCAGTGACTCCTCCTCTAGCCGCTCGGATCTACACCGTCGGTGGTCCGCCGGCAGATACACG
AATGGCGGTCGGCCGGGCTCGGTGCTAGCCCAAAAGCTCGTCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAAGAAGGTCGTGCGCCGCGTGTCTACAACGCTGGAACATTCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTAT
GTGCTCTTTTTAGCTTCGGTTTGTGCTCTAGATTTGACTAGTTGTGCTAACTTCAAATTTTATTGTGTAGCATGGATGCA
AGTTTTGG--TGTAGGGAAGAAGAGTACATCGATATATTGATAGAGCGCAATTTATTAGATGTTCGTGCACTTTTAGCTA
GCATAGAGGCTGTAGATGAGACAAGTGCAGTTGTTGCTAGATTAGAGGCTAGACACGAGACTAGATGCGAGAAAGAAATC
TCTACTTCTTTAGACTCGAAGAAGAAAGAAACACGCAAGATCGAGC---CTCCTCCGCAGATAAACAATGAATGCATCGG
GAAGGCACTAATCCAACTTACAGAAGCAGTTATAGAAGTTGGATATTTTCTAAAATGTATTCTTATGGTTTTTGTTTTCT
TTGGTCTT----ACTTTTCTAGTCAAAATTTGATGATGTATTCCCATGTACCAAAAATGAATGATGAAAAAAAGT-TAAG
GGCTTGCACAGAAAAGAATACGCGGACAGGATGCGGTCGGGATGTGGCCG-CGCGTTGGGCGCACGGCCACCGCAT-CCC
AGAAACGGCCCGGACACGACCCCATTGCCCTACTCAAACATACAGAATTCGGGCAAAA----------------------
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>chr2D_1
CCACAAGGCCGCATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTACACCGTCAGTGGTCCGCCAGCAGATACACG
AATGATGGTCGGTCGGGCTCAGTGCTAGCCCAAAAGCTCGTCGGCGCACCGTTGCCACTCATTAAGTGCGACCAATGCCC
AAAAAAGGTCGTGCGCCGCGTGTCTACGACGCCGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTAT
GTGCTCTTTTTAGCTTCGGTTGTGCTCTTAGATTTGACTAGTTGTGCTAACTTAAAATTTTATTCTGTAGCATGGATGCA
AGTTGTGG--TATTGGGAAAAAGAGTACATCGATATATTGATAGAGTGCAATTTAGTAGATGTTCGTGCACTTTTAGCTA
GCATAGAGGCTAAAGATGAGACTAGTGCACTTGTTGCTAGATTAAAGGCTAGACATGAGACTAGATGCGAGGAAGCAACC
TCTACTTCTTTAGACTCGAAAGAGAAAGAAGCACGCAAGATCGAGC---CTCCTCCGCAGATCAACAATGATTGCATCGA
GAAGGCACTAATCCAACTTACAGAAGCAGTTATGGAAGTTGGATATCTTTTAAAATGTATTCTTGTGGTTCTTGTTTTCT
TTGGTCTT----ACTTTTTTAGTCAAAATTTGGTGATGTATTCCCATGTACCACAAATGAATGATGAAATAAAG--TAAG
GGCTTGCAAAGAAAAATATACGCGGACAGGATGCGGCCGGGATGCATCCG-CGCGTTGGGCGCACGGCCACCGCAT-CCC
AGAAACTGCCCGGACACGAACCCATTGCCCTACCCAAACGGACAGAATCCGGATAAAACGGACGTCCGTTTGAGGTCGCG
CGGTGGAGTTGGC-------------------------------------------------------------------
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>chr5D_1
CCGCAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTATACCGTCGGTGGTCCGCCGGCAGATACACG
AATGGCGGTCGGCCGGGCTCGGTGCTAGCCCAAAAGCTCGTCGGCGCACCGTTGCCACTCATTAAGTGCGACCACAGCCC
AAAGAAGGTCGTGCGCCGCGTGTCTACAACGCCGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTAT
GTGCTCTTTTTAGCTTCGGTTTGTGCTCTAGATTTGACTAGTTGTGCTAACTTCAAATTTTGTTGTGTAGAATGGATGCA
AGTTTTGG--TATTGGGAAGAAGAGTACATCGATATATTGATAGAGTGCAATTTAGTAGATGTTCGTGCACTTTTAGCTA
GCATAGAGGCTGTAGATGAGACAAGTGCACTTGTTGCTAGATTAGAGGCTAGACACGAGACTAGATGCGAGGAAGCAACC
TTTACTTCTTTAGACTCGAAGAAGAAAGAAACACGCAAGATGGAGGCGGCTCCTCCGCAGATCAACAATGAATGCATCGA
GAAGACACTAATCCAACTTACAGGAGCAGTTATGGAAGTTGGATATCTTCTAAAATGTATTCTTGTGGTTCTTGTTTTCT
TTGGTCTT----AATTTTTTAGTCAAAATTTGGTGATGTATTCCCATGTACCAAAAATGAATGATGAAAAAAAGTTTAAG
GGCTTGCAAAGGAAAAAGTACGCGGGCAGGATGCGGCCAGGATGCGTCCG-CCCGTTGGGCGCACGGCCACCGCAT-CC-
AGAAACGGCCCGAACACGACCCCATTGCCCTACCCAAATGGACAGAATCCAAGCAAAACGGACGTCCGTTTGGGGTCGCG
CGGTGGAGTTGGCCTTAGG-------------------------------------------------------------
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>chr5D_1
CCGCAAGGCCGCATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTACACCGTCGGTGGTCCGCCGGCAGATACATG
AATGGCGGTCGGCCGGGCTCGGTGCTAGCCCAAAAGCTCGTCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAAAAAGTTCGTGCGCCACGTGTCTACAACGCCGGAACATCCCGGATGGGTGGTCATCAAGTGCTTAAACGATGGGGTAT
GTACTCTTTTTAGCTTCAGTTGTGCTCTTAGATTTGACTAGTTGTGCTAACTTAAAATTTTATTGTGTAGCATGGATGCA
AGTTTTGG--TATTGGGAAGAAGAGTACATCGATATATTGATAGAGCGCAATTTAGTAGATGTTCGTGCACTTTTAGCTA
GCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGGCTAGACATGAGACTAGATGCGAGGAAGCAACC
TCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATCGAGC---CTCCTCCGCAGATAAACAATGAATGCATCGA
GAAGGCACTAATTCAACTTACAGGAGCAGTTATGGAAGTTGGATATCTTCTAAAATGTATTCTTGTGGTTCTTGTTTTCT
TTGGTCTT----ACTTTTCTAGTCAAAATTTTGTGATGTATTCCCATGTACCAAAAATGAATGATGAAAAAAAGTT-AAG
AGCTTGCAAAGAAAAGTGTATGCGGACAAGATGCGGCCGGGATGCGTCCG-CGTGTTGGGCGCACGGCCACCGCATCCC-
AGAAACGGCCCGGACACGACCCCATTGCCCTACCCAAACGGACAGAATCCAGGCAGAACGAACGTC--------------
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>chr1D_1
CCACAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTACACCATTGGTGGTCCGCCGGTAGATACACA
AATGGCGGTCTGCCGGGCTCGGTGCTAGCCCAAAATCTCATCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAAGAAGGTCATGCGCCGCGTGTCTATAACGCCGGAACATCCGGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTAT
GTGCTCTTTTTAGCTTCGGTTGTGCTCTTAGATTTGACTAGTTGTGCTAACTTAAAATTTTATTGTGTAGCATGGATGCA
AGTTTTGG--TATTGGGAAGAAGAGTACATCGATATATTGATAGAGCGCAATTTAGTAGATGTTGGTGCACTTTTAGCTA
GCATAGAGGCTAGACATGAGACTAGTGCATTTGTTGCTAGATTAGAGGCTAGACATGAGACTAGACGCGAGGAAGCAACC
TCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATCGAGC---CTCCTCCGCAGATCAAAAATGAATGCATCGA
GAAGGCACTAATCCAACTTACAGGAGTAGTTATGGAAGTTGGATATCTTCTAAAATGTATTCTTGTGGTTCTTGTTTTCT
TTCGTCTT----ACTTTTCTAGTCAAAATTTGGTGATGTATTCCCATGTACCAAAAATTAATGATGAAAAAAA--TTAAG
GGCATGCAAAGAAAAATGTACGCGGACAGGATGCGGCCGGGATGCGTCTG-CGCGTTGGGCACACGGCCACCGCAT-CCT
AAAAACGGTCCGGACACGACCCCATTGCCCTACCCAAACTGACAGAATCCGGACAAAACGGACGTC--------------
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>chr2D_4
---CAAGGCCGCATGTAGGTAGTGGCTCCTCCTCTAGCCGCTCGGATCTACACTGTCGGTGGTCCGCCGGCAGATACACG
AATGGCGGTCGGTCGGGCTCGGTGCTAGCCCAAAAGCTCGTCGGCGCACCGTTGCCAGTCATTAAGTGCGACCACTGCCC
AAAGAAGGTCGTGCGCCGCGTGTCTACAACGCCGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTAT
GTGCTCTTTTTAGCTTCGGTTGTGCTCTTAGATTTGACTAGTTGTGCTAACATAAAATTTTATTGTGTAGCATGGATGCA
AGTTTTGG--TATTGGGAAGAAGAGTAGATCGATATATTGATAGAGCGTAATTTAGTAGATGTTCGTGCAATTTTAGCTA
GCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGGCTAGACATGAGACTAGATGCGAGGAAGCAACC
TCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATCGAGC---CTCCTCCGCAGATCAACAACGAATGCATCGA
GAAGGCACTAATCCAACTTACAGGAGCAGTTATGGAAGTTGGGTATCTTCTAAAATGTATTCTTGTGGTTCTTGTTTTCT
TTGGTCTT----GCTTTTCTAGTCAAAATTTGGTGATGTATTCCCATGTATCAAAAATGAATGATGAAAAAAAG-TTAAG
GGCTTGCAAAGAAAAATGTACGCGGACAGGATGCGGCCGGGATGCGTCCG-CGCGTTGGGCGCACGGCCACTGCATCCC-
AGAAACTGCCCGGACACGACCCCATTGCCCCACCCAAACGGACAGAATCCGGGCAAAACGGACGTCCGTTTGGGGTCGCG
CGGTGGAGTTGGC-------------------------------------------------------------------
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>chr2D_4
---CAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTACACCGTCGGTGGCCCGCCGGCAGATACACG
AATGGCGGTCGGCCGGGCTCGGTGCTAGCCCAAAAGCTCGTCGGCGCACCGTTGCCGCTCATTAAGTGTGACCACTGCCT
AAAGAAGGTCGTGTGCCGCGTGTCTACAACGCCGGAACATCCCAGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTAT
GTGCTCTTTTTAGCTTCGGTTTGTGCTCTAGATTTGACTAGTTGTGCTAACTTCAAATTTTGTTGTGTAGAATGGATGCA
AGTTTTGG--TATTGGAAAGAAGAGTACATCGATATATTGATAGAGCGCAATTTAGTAGATGTTCGTGCACTTTTAGCTA
GCATAGAGGCTGTAGATAAGACAAGTGCACTTGTTGCTAGATTAGAGGCTAGACACGAGACTAGATGCGAGGAAGCAACC
TCTACTTCTTTAGACTCGGAGAAGAAAGAAACACGCAAGATGGACGCGGCTCCTCCGCAGATCAACAATGAATGCATCGA
GAAGGCACTAATCCAAGTTATAGGAGTAGTTATGGAAGTTGGATATCTTCTAAAATGTATTCTTGTGGTTCTTGTTTTCT
TTGGTCTT----ACTTTTCTAGTCAAAATTTGGTGATGTATTCCCATGTACCAAGAATGAATGATGAAAATAAGTTTAAG
GGCTTGCAAAGAAAAAGGTACGCGGACAGGATGCGGCCGGGATGCGTCTG-CGCGTTGGGCGCACGGCCACCACATCCC-
AGAAACGGCCCGGACACGACCCCATTGCCCTACCCA--TGGACAGAATCCGGGTAAAACGGACGTC--------------
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>chr4D_4
---CAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTACATCATCGGTGGTCCGCCGGCAGATACACG
AATGGCGGTCGGCCGGGCTCGGTGCTAGCCCAAAAGCTCGTCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAAGAAGGTCGTGCGCCGCGTGTCTACAACGCCGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTAT
GTGCTCTTTTTAGCTTCGGTCGTGCTCTTAGATTTGACTAGTTGTGCTAACTT-AAATTTTATTGTGTAGCATGGTTGTA
AGTTTTGG--TATTGGGAAGAAGAGTACATCGATATATTGATAGAGCGCAATTTAGTAGATGTTCGTGCACTTTTAGCTA
GCATAGAGGCTAGAGATGAGACTAGTGCACTTGTTGCTAGATTAGAGGTTAGACATGAGACTAGATGCAAGGAAGCAACC
TCTACTTTTTTAGACTCAAAGAAGAAAGAAGCACGCAAGATCGAGC---CTCCTCCGCAGATCAACAATGAATGCATCGA
GAAGGCACTAATCCAACTTACAGGAGCAGTTATGAAAGTTGGATATCTTCTAAAATGTATTCTTGTGGTTTTTGTTTTCT
TTGGTCTT----GCTTTTCTAGTCAAAATTTGGTGATATATTCCCATGTACCAAAAATGAATGATGAAAAAAAGTT-AAG
GGCTTGCTAAGAAAAATGTACGCGGACAGGATGCGGCCGGGAAACGTCCGCCGCGTTGGGCGCACGGCCACCGCATCCT-
AGAAACGGCCCGGACACGACCCCATTGCCCTACCCAAACGGACAGAATCCGGACAAAACGGACATCCATTTGGGGTCGCG
CGGTGGAGTTGGCCTAACGGTGTCACAC----------------------------------------------------
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>chr7D_4
---CAAGGCCAAACGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTACAACGTCGGTGGTCCGCCGGCAGATACACG
AATGGCCGTCGGCCGGGCTCGGTGCTAGCTCAAAAGCTCGTCGGTGCACCGTTGCCACTCATTAAGTGCGACCACCGCCC
AAAGAAGGTCGTGCGCCGCGTGTCTACAACGTTGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTAT
GTGCTCTTTTTAGCTTCGGTTTGTGCTCTAGATTTGACTAGTTGTGCTAACTTCAAATTTTATTGTGTAGAATGGATGCA
AGTTTTGG--TATTGGGAAGAAGAGTACATCGATATATTGATAGAGCACAATTTAGTAGATGTTCGTGAACTTTTAGCTA
TCATAGAGGCTGTAGATGAGACAAGTGCACTTGTTGCTAGATTAGAGGCTAGACACGGGACTAGATGCGAGGAAGCAACC
TCTACTTCTTTAGACTCGAAGAAGAAAGAAGCACGCAAGATAGAGC---CTCCTCCGCAGATAAACAATGAATGCATCGA
GAAGGCACTAATCCAACTTACAGGAGCAGTTATGGAAGTTGGGTATCTTCTAAAATGTATTCTTGTGGTTCTTGTTTTCT
TTGGTCTTGCTTGCTTTTCTAGTCAAAATTCGGTGATGTATTCTCATGTCCCAAAAATGAATGATGAAAAAAAGTT-AAG
GGCTTGCAAAGAAAAAAGTACGCGGACAGGATGCGGCTGGGATGCGTCCGC-GCATTGGGCGCACGGCCACTGCATCCC-
AAAAACGGCCCGGACACGACCCCATTGCCCTACCCGAACGGACAGAATCTGGATAAAACGGACGTCCATTTGGGGTCGCG
CGATGGAGTTGGC-------------------------------------------------------------------
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>chr2B_875
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----------------TAGGTGTCCACTC--TATATATACACGCCATTCGGTCGATCAACCTTTCTCATCTCAAGTCTCA
TCAGTCGGTGTAGTTGAGTACTGGTACTCTACTAT--TCGTCTGCTTGCTCGGGACCTCTGGTGTGGCTATGCCAGCTAC
CGGCGAGGGTCCTGGCGCCGCACAGCCGGCGGCGGCGAGGAGGCCGAGCAGGTACGAATCGCAGAAACGGCGTGACTGGC
AGACGTTTGTGCGGTACCTGGCGGCGCACCGCCCACCGCTCGTGCTGCGCCGGTGCAGCGGCGCCCACGTACTCGAGTTC
CTCCGCTATCTCGACCGCTTCGGGAAGACCCGCGTCCACGCGCCGCCCTGCCCGTCCTACGGCGTACACGCGATAACGGC
GACGGCGCCGTGCCCGTGCCCGCTCCGCCAGGCTTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTACGCGCTGCCTTTG
ACGAGCGCTACAGCCGCAGCGTCAGCGCGCCGCCGCCGCAGCAGCAAGACGCCAGTTGCAACCCCTTCGCCGCACGCGCC
GTCAGGCTATACCTGCGTGACGTCCGCGATGCGCAGTCCAGGGCGCGCGGCATCTCCTACCACAAGAAGAAGAAGAAGCG
CAAGCTTGCCACTGGAAGCTGCACCGTGGAGGCCTCGTCCTCCAAGAACGGCGGGTGCGCGGACG------------GCG
TACGCGGGCACAACACTACGACGACGATGAAGGCTAACGTGGCGCCGGTGCCTCAAGCACCGCCACCGCTGCCGCCTCTG
CCGCCAAGCCTGGCCGGGGTACCGTTCGAGTGCGGCTCCGACACGGGAAGCATCGTTGGAGGAGGAGGAGGGTCTACTGG
CGCCGGCTGCTACGGCGGCATATACTTGCGGTTGTTCTTCAACGCATTTAATTAGCCTGTTGATAGCTTAGCCTCAAAAT
GCCTCGTAGTGCCCAATTAGTGTTCGAGTATAATCGACGTACGGCGAGTGCGTCG---TAACGTACCCTGTGTTACTTTG
CTTATTATTTTGTAGTTGTTCCGTTGGTCTACGTAGGCATTTCGTGTATAATTCAGTGTACTCATGACTCATGAGAATGA
GATCTACTCTCTCCGTTCCAAAACATAAAAACGTTTTTGACACTCGTTTTTATATTTTGAGACGGAGGAAGTAGCTTCCA
ACAAACAGATTTGTGCATGCACACCAGCTGACTAGTTTCCCAACATATTTATACTACTTGTGGTAGAGGTAGATTAAAAG
AGACGTGGACAGATTGCTGCAATTGCTTTGCCATGTGGGCAATGAAGAAACGGTACTGAATCGACTCTTCCTTTACCACA
GTAGCAACACC---------------------------------------------------------------------
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>chr2A_875
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----------------TAGGTGTCCACTC--TATATATACACGCTATTCGTTCCATCAGCCTTTCTCATCTCAAGTCTCA
TCAGTCGGCGTAGTTGAGTACTGGTACTCTACTATATTCGTCTGCTTGCTCTGGACCTCTGGTGTGGCTATGCCAGCTAC
CGGCGGGGGTCCTGGCGCCGCGCAGCCGGCGGTGGCGAGGAGGCCGAGCAGGTACGAATCGCAGAAACGGCGTGACTGGC
AGACGTTCGTGCGGTACCTGGCGGCGCACCGCCCACCGCTCGTGCTGCGCCGGTGCAGCGGTGCCCACGTACTCGAGTTC
CTCCGCTATCTCGACCGCTTCGGGAAGACCCGCGTCCACGCGCCGCCCTGCCCGGCCTACGGCGTACACGCGATAACGGC
GACGGCGCCGTGCCAATGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTACGCGCCGCCTTTG
ACGAGCGCTACAGCCGCAGCGTCAGCGCGCCGCCGCCGCAGCAGCAAGACGCCAGTTGCAACCCCTTCGCCGCACGCGCC
GTCAGGCTATACCTGCGTGACGTCCGCGATGCGCAGTCTAGGGCGCGCGGCATCTCCTACCACAAGAAGAAGAAGAAACG
CAAGCTTGCCACTGGAAGCTGCACCGTGGAGGCCTCGTCCTCCAAGAACGGCGGCTGCGCGGACGCCAACTCGGACGGCG
AACGCGGGCACAAGACTACGATGACGACGAAGGCTAACGTGGCGCCGGTGCCTCAAGCACCGCCACCGCTGCCGCCTCTG
CCGCCATGCCTGGCCGGGGTACCGTTCGAGTGCGGCTCCGACACGGGAAGCATCGCTGGAGGAGGG---GGGTCTATTGG
CGCCGGCTACTACGGCGGCATATACTTGCCGTTGTTCTTCAACGCATTTAATTAGCTTCTTGATAGATTAGCCTCAAAAT
GCCTCGTAGTGCCCAATTAATGTTCGATTATAATCGACGTACGTCGAGGGCATCG---TAACGCACCCTATGTTACTTTG
CTTAT---------------------------------------------------------------------------
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>SNPs
----------------------S---------------------------------------------------------
---------S--------------------------------------------------S-------------------
------------------------------------S--------------------------------------S----
-----------------------------------------------------------S--------------------
--------SS-------------------------------------------------------------------S--
---------------------S----------------S-----------------------------------------
--------------------------------------------------------------------------------
----------------S--------------S---S------------------------------------------S-
-----------------------------------------------S--------S-----------------------
-S---------------------S--------S-------S---------------------------------------
--------------------SS-----S----S-------------------------S---------------S-----
-------------S--------------SSS-------------------S-----------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S--S------------------------------------------------------
---------------------S-S------------S-------------------------------------------
-------------------------------S------------------------------------------------
-----------------------S--S-----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
-------S-------------------------------------S---------SSS----------------------
------------S------------------------------------S------S-------------S---------
--------------------------------------------------------------------------------
----S-----------------S---S-SS-----------------------S----------S---------------
-S-S--------------------------S---------S-----------------------------S---------
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_828
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TCCGGACACGACTTCATTGT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_2375
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CAGATCTAGGGGTGGGGTCA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
