>input_sequence_68952
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATGGCATGGC
CACTGCTCCGGCAGCT------CCTGCTCATCGCCGC---CGCCACCACCGCGGCTGCGTCGGCCTCAGCGACGACGCCT
GACCGGCCGGCGCCGTGGCCGGAGCAGTTCCACGCGGTGCTGTTCACGAACCTGACCAACGTCTCGATTGCTTCAACGGG
CCCGCCGCTCCGCCTGCACGACCTGTACTACGATTGGCCGCGGCGGCGCAACCTGAACCTTATCCGGCACCAGCTGTCCG
GGGACCCGCTGTACGACGTGGAGTGGAACAACGGCACCACCTTCTACTTCGACTCGGCCACCTGCCGCACGCAGCAGGTC
CCCGTCGGCGTGCTCCCCCCCGGGTGGCTCGCCGACGGAGGCGCCGTCTACCTCGGACGCGAGACCACCGGCGGGATCGA
CTGCCACGTCTGGGGCAAGGCTGATTTCATCGTCTACTACGAGGACGCGCTCACGGGCCGCCCCGTCCACTGGAACTTCC
TTGACGGTATGCACATCCCATTGC------CACTACTGTTAGTTTATCAGCTCCAAAAAATCCATGTACGTACGTGATGT
CTGAAACTTTATGGAGGTCTGCA----------TGCATGTTTGCAGTGACGGGGTTACAGCAGTTCGTGATGAGCTTCGA
GGTGGGCGTGGTGCTGGAAGATGACGACCAGTGGCAGGCGCCCGCGCACTGCTTCCTGGATGAAACTGCTAACCGGACCA
ACGAGGATGACGACCATCTGGATGAATGGCAG------------GCGGCCAGGCTATTCAGGAAGTTTGCTGGAGCTGCT
GCCGCGTACTGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>chr3B_1_TraesCS3B01G099800
AAAAATAACTTGCACCAGCATGGAAAGTTATGACCCATTAAGATTTTTTCGTTGTGTGCGAGGGTGACGCGAAACTAAAT
TGGTGGGGTGGGGGAAGGACGAAAAAAAACCAGCGAAATAAAACGGGTGGGAGGTGGGAGGAAGTACCAAAAAAGACCGG
GTAAGGTGGGACGAAAATAAAACCCGGAACGCGACCTACCAACTGAGACATTAGGAGTAGAGATAATCGTATTTTTTATT
TTTTTTAATTTAATATGTGTTTATAAGTTCACTTTTGTGGACTAGACATAAAAACTGATGGCTTCGGATGATGCTTTTTT
ATTTTTATTGACTGACAGGTCACTACATAACTATGATGGTTTGGACTGAAAAATCATCGAGTTTTACACAATCAAAAGAG
ATGCATAAAAATAAGTGTTGCACACGATAATACAAAAGGTGTACTTTTTATATGTTCATTTTTAAAGAGTATAAGAAAGA
TGGAGATGGATTATGTTGACGTTCAAAAGTAATCCGCCGTT-AAAATAATCCATCGATAAAGGACCCGAGACGATATTAC
TGGAAGGGGCCAAAAATTCACCAAGTTTTATAAAACAATACAAGTATATATATGCAACTA--AAAAAAATACTAAAAGGT
CCATGGCAACGCACGGGCGTTCTACTAGTGTAACTAAAAATTT-------------------------------------
--------------------------------------------------------------------------------
-----------CAGTAGTGGAATTGACCATTCTTGCGGCAATGGCCAATCTGCTAAACTTGATGTAAGTAGATCTGCATA
ATGACGTTGTATTTGGAACTATGCTAACAAGTGA--------------------------------------TACTCATC
ACTGAAACTGTGAAACATGATA------TTTGCTTCATTGTTTCTTATATAACTTGACAAATCTCCAAGAAGCTTGTGCG
GCTGAAATTGCTGCACATGGA-TGGTATAAATCTGCTGCCCACA-AATCCATTGCTTTTGGTCACTGGTTGT---CAC--
-----CCCTCACTCACCACTCACCAGCAGACCGACAGGTGAAACCAAAGATAAGGTCCGGG---ACAGAGATGGCATGGC
CACTGCTCCGGCAGCT------CCTGCTCATCGCCGC---CGCCACCACCGCGGCTGCGTCGGCCTCAGCGACGACGCCT
GACCGGCCGGCGCCGTGGCCGGAGCAGTTCCACGCGGTGCTGTTCACGAACCTGACCAACGTCTCGATTGCTTCAACGGG
CCCGCCGCTCCGCCTGCACGACCTGTACTACGATTGGCCGCGGCGGCGCAACCTGAACCTTATCCGGCACCAGCTGTCCG
GGGACCCGCTGTACGACGTGGAGTGGAACAACGGCACCACCTTCTACTTCGACTCGGCCACCTGCCGCACGCAGCAGGTC
CCCGTCGGCGTGCTCCCCCCCGGGTGGCTCGCCGACGGAGGCGCCGTCTACCTCGGACGCGAGACCACCGGCGGGATCGA
CTGCCACGTCTGGGGCAAGGCTGATTTCATCGTCTACTACGAGGACGCGCTCACGGGCCGCCCCGTCCACTGGAACTTCC
TTGACGGTATGCACATCCCATTGC------CACTACTGTTAGTTTATCAGCTCCAAAAAATCCATGTACGTACGTGATGT
CTGAAACTTTATGGAGGTCTGCA----------TGCATGTTTGCAGTGACGGGGTTACAGCAGTTCGTGATGAGCTTCGA
GGTGGGCGTGGTGCTGGAAGATGACGACCAGTGGCAGGCGCCCGCGCACTGCTTCCTGGATGAAACTGCTAACCGGACCA
ACGAGGATGACGACCATCTGGATGAATGGCAG------------GCGGCCAGGCTATTCAGGAAGTTTGCTGGAGCTGCT
GCCGCGTACTGAACATGTCTGAATCTGAAT------ATAAATATATGGTGCGTGTTTGGCTGGCGAGCCACTCCTACATT
ACACGGGTGAACTATGTAATCTCGGGTTAGACCGCTCGTGCTTGTGTTATCTTGTCTCTTGTCTGTTAGTCATGTGTGTA
TATTTTGTAATGTAGAGCCCGGGGTACTCCCCTTTTCAAAAGTAATGAGATGTGTGCTTGCG------------------
-----------TAAGTACTGCAACTATTAAATGTGTGACTTAGCTTACTTAAAGATAACCAATGATTAATTTTTTCTTAG
ACTATGCTA-TTACAAAACCATCACTGGAAATGTCACATCCCAGTCTA--------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGGTAGGAACCAAACCTTTTGAAATATTATTG
----GGCATAAGGCTATCCATAATAAGTCCCAAGTAATATACAAAGCCCTATTAGTTTTTTCCCAAAATATTTGAGTTGG
ATTTA-TTTTGTAGTCAATCCAAATCAAAGGGAA--------TTATTC-AAAAATGGTCATGTATTTTATTGGCAGGGAA
TATTATTTCCATAAGTCCAAATGACATGTTGAACTTCTGCCCAC-TTTCTAAAATGAATTTGAAACATATTTGGTTTTGA
AACCAAATTCAAATTTAAAAAGAAAATATAAGTGCATACATTATATGTCCAAAATGCC-AAACAAAAAAATTGAACATTC
ACAAATATTCCATTTGGAA-TTAGAAAATGTTCTCTATTTGTAAAAAAAATCAAATTCAAACTCTATTTGAATTTACAAA
AAAGACGGAAAAAGAAAAAAGAAGAAAAATGGAAACAGAAAAGAAAAAA---------GGCCCATCTGGGCCAGCCAGCC
TCACGCGCGCCCAT-----CTCTCTCCCCCGAGCCACTGACATGTGGGGCCCGCATGTCAAGTCTGTCCCCCACCTCTCT
CTCGCAACTGCCCACATCGCGCACGAC-----------------------------------------------------
------------------------CCCAAGCACGACTGCGCCCAGGTTGCGCACATTCACGTGCTCTCCGGCCACCGCAC
CTATAAATAGCCCTCGACCTCCTCATCATTTTGCCC
>chr3D_478
AGATGA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AGATGGATTATGTTGACGTTAAAAAGTAATCCGCCGTTAAAAATAATCCATCGATAAAGGACCCAAGACGATATTAT
TGGAAAGGGCCAAAATTTCACCAAGCTTTATAAAACAATACAAGTATATATATGCAACTAGAAAAAAAATACCAAAAGGC
ATGTGGCAACGCACGGGCGTTCTACTAGTGTAACTAAAAATTTCAGTAGGTACCCAATTATGGTCTGATTGTATCGGTTT
TAGCCCGGTTTTCCGTAGATTAACCGGGCAATTCTCTTCTTCTTAATTAATCGATGAGGCAATTCTTTTGCCTCCGTTTC
GAAAAAAAAATCAGCAGTGGAATTGACCATTCTTGCGGCAATGGCCAATCTCCTAAACTTGGTGTAAGTGGATCTGCATA
ATGACGCTGTATTTGGAACTATGCTAACAAGTAA--------------------------------------TACTCATC
ACT--------GAAACATGATA------TTTGCTTCATTGTTTCTTATATAACTTGATAATTCTCCAAGAAGCTTGTGCG
GCTGAAATTGCTGCACATGGAT-GGTATAAATTTGCTGCCCATTCCATCCATTGCTTTTGGTCACTGGTGGT---CACCC
CTCAGCCCTCACTCACCACTCACCAGCAGACCGACAGGTGAAACCAAAGATAAGGTCCGGG---ACAG--ATGGCATGGC
CAGTGCTCCAGCAGCT------CCTGCTCATCGCCGC---CGCCACCACTGCGGCGGCGTCGTCCTCAGCGACGACGCCT
GATGGGCCGGCGCCCTGGCCGGAGCAGTTCCACGCGGTGCTGTTCACGAACCTGACCAACGTCTCGATTGCTTCAACGGG
CCCGCCGCTCCGCCTGCACGACCTGTACTACGACTGGCCGCGGCGGCGCAACCTGAACCTGATCCGGCACCAGCTCTCGG
GGGACCCGCTGTACGACGTGGAGTGGAACAACGGCACCACCTTCTACTTCGACTCGGCCACCTGCCGCACGCAGCAGGTC
CCCGTCGGCGTGCTCCCCCCCGGGTGGCTCGCCGACGGAGGCGCCGTCTACCTCGGCCGCGAGACCACCGGCGGGATCGA
CTGCCGCGTCTGGGGCAAGGCCGACTTCATCCTCTACTACGAGGACGCGCTCACGGGGCGCCCAGTCCGCTGGAACTTCC
TTGACGGTATGCACATCCCCATTGCTACTGCACTACTGTTTGTTTATCAGCTCCGAAAAATCCATGTACGTACGTGATGT
CTGAAACTTTATGGAGGTCTGCA----------TGCATGTTTGCAGTGACGGGGTTACAGCAGTTCGTGATGAGCTTCGA
GGTGGGCGTGGTGCTGGAAGACGACGACCAGTGGCAGGCGCCCGCGCACTGCTTCCTGGATGAAGCAGCCCACGGGACCA
ACGAGGATGACGACCATCTGGATGAATGGCAG------------GCGGCCATGCTATTCAGGAAGTTGGCTGGAGCTGCT
GCCGCGTACTGAACATGTCTGAATCTGAATATATAAATAAATATATGGTGTGTGTTTGGCTGGCGAGCCACTCGTACATT
ACACGGGTGAACTATGTAATCTCGGGTTAGACCGATCGTGCTTGTGTTATCTTGTCTCTTGTCTGTTACTCG-GTGTGTA
TATTTTGTAATGTAGAGCCCGGGGTACTCCCCTTTTCCAAAGTAATGAGATGTGTGTTTTCACATCTTGCTAGTGGGAAA
TGGCACTTGCATAAGTACTGCAACTATTAAATGTGTGACTTAGCTTACTTAAAGATAACCAATGATTAATTTTTTCTTAG
ACTATGCTA-T-ACAAAACCTTCACTGGAAATGTCACATCCCAGATTTTTCCCAAATCTGGGATGTTAAAAAATTCACAA
GGAATTAAATTTTTTCTAGGAAATACCCATGAGTGCCTAGGATTTGATTGTGATTAACTTTGATTGTTTGATTGTTTGCA
TAGAAGGGATAAAATCCCAATACAGTTAGTTGAAACCTAGCTAGTCATTGGTAGGAACCAAACCTTTTCAAATATTATT-
--TAGGCGTAAGGCTATCCCTGATAAGTCCCAAGTAATATTCAAAGCCCTATTAAAATTTTCCCAAAAGATTTGAGTTGG
ATTTA-TTTTGTAGTCAATTCAAATCAAAGGGAAAAAGGGTATTGTTCAAAAAATGGTCATGTATTTTATTGGCAGGGAA
TATTATTTCCATAAGTCCAAATGACATGTTGAACTTCTGCCTAC-TATCTAAAATGAATTTGAAACATATTTGGTTTTGA
AACCAAATTCAAATTTAAAAGGAAAATATAAGTGCATGCATTATATGTCCAAAATGCCCAAACAAAAAATTTGAACATTC
ACAAATATTCCATTTGGAATTTAGAAAATGTTCTCTGTTTGAAAAAAAAATCAAATTCAAACTCTATTTGAATTTACAAA
GAAGACGGAAAAAGAAAAAAGAAGAAAAATGGAAACGGAAAAGAAAAAAT-----AAAGGCCCAACTGGACCAGCCAGCC
AGGCCGTGGTCCAGTTAGCCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCAAGCACGCCTGCGCCCACGTTGCCCACGTTCACGTGCTCTCCGGCCACCGCAC
CTATAAATAGCCCTCGACCTCCTCATCATTTTGCCC
>chr3B_666
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TGTAACTAAAAATTT-------------------------------------
--------------------------------------------------------------------------------
-----------CAGTAGTGGAATTGATCATTCTTGCGGCAATGGCCAATCTCCTAAATTTGGTGTAATTGGATCTGCATA
ATGACGCTGTATTTGGAACTATGCTAACAAGTGATATTATTTTACACAGAGTGGACGACATTGATTATTTGGTACTCATC
ACT--------GAAACTTGATACTCCTATTTGCTTCATTGTCTCTT----CACTTGATAAATCTCCAAGAAGCTTGTGCG
GCTGAAATTGCTGCACATGGATTGGTATACATTTGCTGCCCATT-CATCCATTGCTTTTGGTCAGTGGA------CAC--
-----CCCTC-------GCTCACCAGCAGACAGACAGGTGTAACCAAAGATAAGGTCCGGG---ACAGACATGGCATGGC
CACTGCTCC---AGCT------CCTGCTCATCGCCGC---CACCACCACTGCAGCGGCGTCGTCCTCAGCGACGACGCCT
GACGGGCCGGCGCCATGGCCGGAGCAGTTCCACGCGGTGCTGTTCACGAACCTGACCAACGTCTCGTTCGCATCGACGAG
CCCACCGCTCCGCCTGCACGACCTCTACTACGACTGGCCGCGGCGGCGCAACCTGAACCTGATCCGGTACCAGCTGTCCC
GCGACCCGCTGTACGACGTGGAGTGGAACAACGGCACCAGCTTCTACTTCGACTCGGCCACCTGCCGCACGCTGCAGTTC
CCCGTCGGCATGCTCCGCCCCGGGTGGATCGCCGAGGGCGGCGCCGTCTACCTCGGCCGCGAGACCACCGGCGGGATCGA
CTGCCACGTCTGGGGCAAGGCTGACTTCATCGTCTACTACGAGGACGCACTCACGCGCCGCCCCGTCCGCTGGAACTTCA
TTGATGGTATGTACGGCCCGGCCGCGATCCAT-------------------------------ACATCCCCACGTGATGT
CTGAACTTTACTGGATTTGATTTGATGGAGCTTTGCATGGTTGCAGTGACGGGGATAGAGCAGTTTGTGATGAGCTTCGA
GGTGGGCGTGGTGCTGGAAGACGATTCGCAGTGGCAGGCACCCGCGCACTGCTTCCTGGACGACGCAGCCAACAAGACCA
ACGAGCACGACGATCATGTCGCTGTTTCGAATGGCGTCATGGACGCGCTCAGGCTATTCAGGAAGTTTGCTGGAGCTGCC
GCCGCCTACTGATAATGTCTGAATATGAAT------A-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>chr3D_666
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TGTAACTAAAAAGTT-------------------------------------
--------------------------------------------------------------------------------
-----------CAGTAGTGGAATTGATCATTCTTGCAGCAATTGCCAATCTCCTTAATTTGGTGTAATTGGATGTGCATA
ATGACGCTGTATTTGGAACTATGCTAACAAGTGATATTATTTTACGCAGAGTTGACGACATCGATTATGCGGTACTCATC
GCT--------GAAACTTGATA------TTTGCTTCATTCTCTCTG----AACTTGATAAATCTCATAGAAACTTGTGCG
GCTGAAATTGCTGCACATGGAT-GGTATAAATTTGCTGCCCAGT-CGTCCATTGCTTTTGGTCAGTGGT------CAC--
-----CCCTCACTCACCACTCACCAGCAGACAGACAGGTGAAACGGAGGATAAGGTCTGCGACAACAGACATGGCATGGC
CACTGCTCC---AGCTCCAGCTCCTGCTCATCGCCGCTGCCGCCACCACTGCGGCGGCGGCGTCCTCAGCGACGACGCCC
GATGGGCCAGCGCCGTGGCCGGAGCAGTTCCACGCGGTGCTGTTCACGAACCTGACCAACGTCTCGATCGCATCGACGAG
CCCGGCGCTCCGCCTGCACGACCTCTACTACGACTGGCCGCGGCGGCGCAACCTGAACCTGATCCGGTACCAGCTGTCCG
GCGACCCGCTCTACGACGTGGAGTGGAACAACGGCACCAGCTTCTACTTCGACTCGGCCACCTGCCGCACGCTGCAGTTC
CCCGTCGGCGTGCACCGCCCTGGGTGGATCGCCGAGGGCGGCGCCGTCTACCTCGGCCGCGAGACCACCGGCGGGATCGA
CTGCCACGTCTGGGGCAAGGCTGACTTCATCGTCTACTACGAGGACGCGCTCACGCGCCGCCCCGTCCGCTGGAACTTCA
TTGATGGTATGTACGGCCCGGCCGCGATCCAT-------------------------------ATATCCCCATGTAATGT
CTGAACTTTACTTGGTTTG-----ATGGAGCTTTGCATGGTTGCAGTGACGGGGATAGAGCAGTTTGTGATGAGCTTCGA
GGTGGGCGTGGTGCTGGAAGACGACGACCAGTGGCAGGCACCCGCGCACTGCTTCCTGGACGACGCAGCCAACAAGACCA
ACGAGCACGACGATCATGTCGCTGTTTCGAATGGCGTCATGGACGCGGTCAGGCTATTCAGGAAGTTTGCTGGAGCTGCC
GCCGCCTACTGATAATATCTGAATATGAAT------A-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>chr3A_802
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGAAACTTGATA------TTCGCTTCATTGTCAACC----CAATCGATAAATCTCCAAGAAGCTTGTGCG
GCTGAAATTGCTGCACATGGAT----ATACATTTGCTGCCCACT-CATCCATTGCTTTTGGTCACTGGTGGTGGTCAC--
-----CCCTC-------ACTCACCAGCAGACAGACAGGTGTAACCAAAGATAAGGTCTGGG---ACAGACATGGCATGGC
CACTGCTCC---AGCTCC------TGCTCATCGCCGCCGCCG------CCGCGGCAGGGGCGTCCTCAGCGACGACGCCT
GACGGGCCGGCGCCATGGCCGGAGCAGTTCCACGCGGTGCTGTTCACGAACCTGACCAACGTCTCGATTGCCTCGTCAGG
CCCGCCGCTCCGCCTGCACGACCTGTACTACGACTGGCCGCGGCGGCGCAACCTGAACCTGATCCGGCACCAACTCTCAG
GCGACCCGCTGTACGATGTGGAGTGGAACAACGGCACCACCTTCTACTTCGACTCGGCCACGTGCCGCACGGAGCAGTTC
CCCGTCGGCGTGCTCCGCCCCGGGTGGCTCGCCGACGGCAGTGCTGTCTACCTCGGCCGCGAGACCACAGGCGGGTTCGA
CTGCCACGTCTGGGGCAAGGCCGGCTTCATCGTCTACTACGAGGACGCGCTCACGCGCCGCCCCGTCCGCTGGAACTTCA
TTGATGGTATACC---CCCATTGC------TACTACTATT-----------------------------CCACGTGATGT
CTGAACTTTACTGGATTTG-----ATGGAGCTTTGCATGGTTGCAGTGACGGGGATAGAGCAGTTTGTGATGAGCTTCGA
GGTTGGCGTGGTGCTGGAAGACGATTCCCAGTGGCAGGCGCCCGCGCACTGCTTCCTCGATGAAGCAGCCAACAAGACCA
ACGAGGATGGCGATCATGTCGCCGTTTCGAATGGCGTCATGGACGCGGCCAGGCTATTCAGGAAGTTTGCTGGAGCTGCC
GCCGCCTACTGATAATGTCTGAATATGAAT------A-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>chr3B_1832
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GAGCCACTCGTACATT
ACACGGGTGAACTATGTAATCTCGGGTTAGACCGCTCGTGCTTGTGTTAGCTTGTCTCTTGTCTGTTAGTCATGTGTGTA
TATTTTGTAATGTAGAGCCCGGGGTACTCCCCTTTTCAAAAGTAATGAGATGTGTGCTTGCG------------------
-----------TAAGTACTGCAACTATTAAATGTGCGGCTTAGCTTACTTAAAGATAACCAATGATTAATTTTTTCTTAG
ACTATGCTATT-ACAAAACCTTCACTGGAAATATCACATCCCAGTCTA--------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGGTAGGAACCAAACCTTTTGAAATATTATTG
----GGCATAAGGCTATCCCTAATAAGTCCCAAGTAATATTCAAAGCCCTATTAGTTTTTCCCCAAAATATTTGAGTTGG
ATTTA-TTTTGTAGCCAATCCAAATCAAAGGGAA--------TTATTCAAAAAATGGTCATGTATTTTATTGGCAGGGAA
TATTATTTCCATAAGTCCAAATGACATGTTGAACTTCTACCCAC-TTTCTAAAATGAATTTGAAACATATTTGCTTTTGA
AACCAAATTCAAATTTTAAAAGAAAATATAAGTGCATGCATTATATGTCCAAAATGCCCAAACAAAAAAATTGAACATTC
ACAAATATTCCATTTGGAATTTAGAAAATGTTCTCTATTTGAAAAAA-AATCAAACTCAAACTCTATTTGAATTTACAAA
GAAGACGGAAAAAGAAAAAATAAGAAAAATGGAAACAGAAAAGAAAAAA-------AAGGCCCA----------------
-----------------------------------ACTGACATGTGGGGCCTGCATGTCATGTCCGTCCCCCACCTCTCT
CTCGCAACTGCCCACATCGCGCACGAC-----------------------------------------------------
------------------------CCCAAGCACGACTGCGCCCAGGTTGCCCACATTCACGTGCTCTCCGGCCACCGCAC
CTATAAATAGCCATCGACCTCCTCATCATTTTGCCC
>chr3A_2100
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGTCCC--------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGGCAGGAACCAAACCATTTTAAATACTATTA
TTTAGGCATAAGGCTATCCCTAAAAAGTTCCGAGTAATATTCAAAGCCCTATTAAATTTTTCCCAAAAGATTTGAGTTGG
ATTTATTTTTATAATCAATTCAAATCAAAGGGAA--------TTATTCAAAAATGGTC--TGTATTTTATTGGCAGGGAA
AATTATTTCCATAAGTCCAAATGACATGTTGAACTTCTGCCTACTTTTCTAAAATGAATTTGAAACATATTTGGTTTTGA
AACCAA-TTCAAATTCAAAAGGAAAATATAGGTGCATAAATTATATGTCCAAAATGCCCAAACAAAAAATCA-AACATTC
ACAAATATTCCATTTGGAATTTAGAAAATGTTCTTTGTTTAAAAAAAA-------------------TTCAATTTACAAA
GAAGACAGAAAAAGAAGAAAGAAGAAAAATGGAAACAGAAAAGAAAAATAAAAAGAAAAGCCCCACTGGACCAGTCAGCC
TCACCCGCGCCCCCTCCCCCTCCCCCCCGCGAGCCACTGACATGTGGGGCCCGCGTGTCAGGTCCGTCCCCCACCTTTCT
CTCGCAACCGCCCACCTTGCGCATGAC-----------------------------------------------------
------------------------CCCAAGCACACCTGCGCCCATGTTCCCCACGTTCACGTGCTCTCCGGCCACTGCGC
CTATAAATAACCCTCAACCTCCTTGTCATTTTGCC-
>SNPs
-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS--------------------S-------------------------------------------S-----------S
-----S---------S---------S----------------------------------------------S------S
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S---------S-------S----------
------S-------------------------------------------------------------------------
---SSSSSSS-----------------------------------------------S----------------------
--------------------------------S----------S-S-----------------------S----------
---------------------------------------------------------------------S----------
---------S---------------------------------------------S------S-----------------
---S----------------------------------------------------------------------------
---------------------------------S--------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
------------------------S-------------------------------------------S-----------
----------------------------------------S-------------S-------------------------
--------------------------------------------------------------------------------
---------------------S------------------------------------------S-S--S---S------
--------------------------------------------------------------------------------
--------------------------------------------------S----------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S--------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
S---------------------------------------------------------------S----S----------
----S--------S--------S-S---S-------------------------------S---S---------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
------------------------------------
>forward_177
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CGG
GTAAGGTGGGACGAAAA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>reverse_1910
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TAACCGGACCA
ACGAGGATG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>forward_207
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AACGCGACCTACCAACTGAG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>reverse_1914
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGGACCA
ACGAGGATGACG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>forward_209
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CGCGACCTACCAACTGAGAC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>reverse_2341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ATCACTGGAAATGTCACATCCCA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
