>input_sequence_68892
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---------------------------------------------------------------------------ATGGC
CGGCAATGGAGCTACCACCCGGAGGCTGCTCACCCTGTTTCCGCTCCACGTGACCCTCATCTTCCTTCTCGGCGCCAACG
GGGCGGACGCTGCGACTTCCTTCAGCTTCGCCAACGAGTGCTCGCACCCGGTGTGGGTGGGCGTGCTCAGCGGCGCCACC
TCGCCGCAGCTGCCCCGCACCGGCTTCTACCTCGCCCCGGGCGGGACCTCCTCGCTCGCCGCCCCGTCCTCCGGCGCCTG
GTCCGGCAACTTCTGGGCGCGCACCGGCTGCGCCGTCGACGAGGGCACCGGCCGCCTCGCCTGCGCCACCGCCGACTGCG
GCAGCGGCGACGTCGCCTGCGACGGCCGCGGGCCCGCCCCGCCCGTCACGCTCGCGGAGATCACCCTCGCCGCCCCCGGC
TCCGGCGGCCTCGACTTCTACGACGTCAGCCTCGTCGACGGCTTCAACCTGCCCGTCAGCATCGCGCCCGCCCA------
------CGGAGGCTGCCAGGCGGCGGCGTGCGCGGGCGACGTGAACGCCGTGTGCCCGTCGGACCTGAGCGTCGCGTCCG
GCTCAAGCGGTGAGGTGGTGGCGTGCAAGAGCGCCTGCAACGCCTACGGCAGCGCGCGCTACTGCTGCAGCGGCGACTAC
GGCACGCCGGCGGCCTGCGGGCCCACCAGCTACTCGCAGGTGTTCAAGGCCGCCTGCCCGGCGGCCTACAGCTACGCCTA
CGACGATGCCAGCAGCACCTTCACCTGCTCCGCCGCCGCCACCTACCACATCACCTTCTGTCCTGCCACTTAA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr1A_1_TraesCS1A01G037300
CAAACAGATATCGCCCGCCAGCTTTGTCGGCCGGGCGCCGCCACAAGCGGCGGCGGCCAGGGGTTTCATGGACAGGAGGC
GCTCAGGGCTAGGGTTTCACCTTCAGGTCGGAGGGAGAATGGCTGTATTTTTCATCATAATAATAATTATTGTTT-GGGG
GAGTTGCATTGCGACTTTGCGAGTCACACGCCAAAGACTAAAAACCTTTCATCAATCAACTAAAAACAAAAGTACTAAAA
CCCTTTTTGCATTTTTCTCTTGTCAGTTCAACCGTCACTTGACTCAAAGATAGTCGTACCGGTTAATCAAGCTTCTTCGC
CATGCATGGACATATCTAGTACCCGCATTGCATCTGCACCGAAAAAGGGATCGGTGAACCAAAAAGGCAGATCGATCAAC
CGACGATCGGTGGAATTGATGACTACTGACGTACGTACGT----GACGACATTAACTTGGTTATTACTCCCTCTGTAAAG
TAATATAAGAACGTTTATAGATTACTAAAGTAGTGATCTAAACGCTTTTATATTAGTTTACGGAAGGAGTACTTGTTTGC
CTTTGCTTTTTCTCATCATGATATGATGCATGGATCGATCGGCCGATGTAGCTAGCCCACGCCAAGCATACGGCCAAAAA
CTATCGAGTAAGC--------TTTTTTTTACCCAAAAAACTAAGAAGCGGCAACGTTTTTCTACCAGTTTGTTGCAT---
-----GCATGTTGACAC------GTTCGCTTTAATAATTTTTCTCATCCACGCATCACCTATACCCTCTCTAGCTACCTA
TCTACCCTGACGTGCCTACCTTAATTACCCATTGTTCATCGATTATCTCCTGCGTGCATCTACCCACT---TGTTTTAGT
ATGGCACGTACGCGCGTACGTACTTTGACACGCTATAAATAAACATCTCAGCCAAGAAA----GATGGATCGATCCAGGT
GTCAATTTGCTTGCTAATTGACCAGTGACGCTCCATTCGTCGATCTCACCGGC-TTCTTCTCGGGCCGACTGGCGATGGC
CGGCAATGGAGCTACCACCCGGAGGCTGCTCACCCTGTTTCCGCTCCACGTGACCCTCATCTTCCTTCTCGGCGCCAACG
GGGCGGACGCTGCGACTTCCTTCAGCTTCGCCAACGAGTGCTCGCACCCGGTGTGGGTGGGCGTGCTCAGCGGCGCCACC
TCGCCGCAGCTGCCCCGCACCGGCTTCTACCTCGCCCCGGGCGGGACCTCCTCGCTCGCCGCCCCGTCCTCCGGCGCCTG
GTCCGGCAACTTCTGGGCGCGCACCGGCTGCGCCGTCGACGAGGGCACCGGCCGCCTCGCCTGCGCCACCGCCGACTGCG
GCAGCGGCGACGTCGCCTGCGACGGCCGCGGGCCCGCCCCGCCCGTCACGCTCGCGGAGATCACCCTCGCCGCCCCCGGC
TCCGGCGGCCTCGACTTCTACGACGTCAGCCTCGTCGACGGCTTCAACCTGCCCGTCAGCATCGCGCCCGCCCA------
------CGGAGGCTGCCAGGCGGCGGCGTGCGCGGGCGACGTGAACGCCGTGTGCCCGTCGGACCTGAGCGTCGCGTCCG
GCTCAAGCGGTGAGGTGGTGGCGTGCAAGAGCGCCTGCAACGCCTACGGCAGCGCGCGCTACTGCTGCAGCGGCGACTAC
GGCACGCCGGCGGCCTGCGGGCCCACCAGCTACTCGCAGGTGTTCAAGGCCGCCTGCCCGGCGGCCTACAGCTACGCCTA
CGACGATGCCAGCAGCACCTTCACCTGCTCCGCCGCCGCCACCTACCACATCACCTTCTGTCCTGCCACTTAACTCATCA
ACCTCACAATCCTTATAATTAATTAATTAATTAATTATAATCACGCAGTGGACATGTATGCAGTTTAA-TTTTTCAGTGA
AAATAATATTTATAAAGAGTAAAAAAGGGATTACAAATCTTTATGCTTCCTTATTCTTTTTTTCTTTGAGGGGATTATGC
TTCCTTATTCAATGTGTATTTTGGTAATCAGTACTGTAGCACAAAATGGATGAGAACAAAGCCATGCCTTTGCCGCCTCT
TATTTTTCGGTTTAATTCTTCAGCAATGTACAGTGCCTCTCCTCTCTCTTATTTTTCATCTATTATTGGCCAGCGCTAGG
TGTCAGCCTGATGTAGCCTATAATCTATATCTATATCTATACCTATTACTATGTACTAATATTAATTACTAATTATCTAT
ACCTATTAATAAAG-GAAATAGATATTTTTATTCAGTCATG-TTATTTTATAAAGAAAAACCTAATGTTTCTGAAATTAA
ATCCGCAGTACATATCAAATA-------T-TTTTTTTAAATACTCATATCTTCTAAACCGTAACTTTAAATTTAACATGT
TACATATGGAATTTGATTAGAAAAATACATATAATCTGAATATGATGTTATTTT-ACCTATTAACCAT-----TAAAAAA
---ACTATTTAGGGTGCAATCTTAATCAACAGTGCATTATCTGTCTTT-TTCCATATCGGTATTGATCCGGATTGTGGAT
AAACCTCTCATCAAAATTAGGATTGGAGACGAAATTGAAGATCACCCGCCCGTTTCTTTATACGTATTAAGTCTACATGC
AAGCCATGTTTAAATAGAAGACATGTCGAATCTTGAACTTGTGCTTTTGTAGGCAAATACCATCTTTGTTTGGACCGTAG
CTACAAACACTCAGATTATATACCATTTTTTTTGTAAATTAAGAGCATGTGGTATTCTTTTCTCCCGCTGCA-----CGG
GCCCTTTTGCTAATTACTAATTATATAATGAACTATGCATTATCCGTCTTTTTTTCGTA
>chr1B_146
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATTATTGTTTGGGGG
GAGTTGCATTGCGA--------GTCACACACCAAGGACTAAAAACCTTTCATCAATCAACTA--AACAAAAGAACTAAAA
CCCCTTTTGCATTTTTCTCTTGTCAGTTCAACCGTCACTTGACTATAAGATAGTCGTACCCGTTAATCAAGCTTGTTCAC
CATGCATGGACATATGTAGTACCCGCATTGCATCTGCACCGAAAAT-GGATCGGTGAACCAAAAAGGCAGATCGACCGAC
---CGATCGGTGGAATTCATGGCTACTGACGTACGTACGTACGTGATGACATTAACTTGGTCATTACT------------
----------------------------------------------------------------------------TTGC
CTTTGCTTTTTATCATCGTTATATGATGCATGGATCGAT----CGATGTAGCTAGCCCACGCCAAGCATACGACCAAAAA
ATATCGAGTAAGCGTCTTCTTTTCTTTTTTACCAAAAAACTAAGAAACGGCAACGTTTTTCTACCAGTTTGTTGCATCCA
TGCACGCATGCATGTTGACACATGTTCGCTTTAATATTTTTTCTCATCCACGCATCACCTATATCCTCTCTAGCTAGCTA
TCTACCCTGACCTGCCTACCTTAATTACCTCTTGTTCATCGATTATCTCCTGGGTGCATCTACCTACT---TTGTTTAGT
ATGGCACGTACGTACTTTGAGTCTTTGACACGCTATAAATAAACATCACAGCCAAGAAAGATGGATGGATCGATCCAGGT
GTCAATTTGCTTGCTAATTCACCAGTGACGCTCCATCCGTCGATCTCACCGGCCTTCTTCTCCGACCGACTGACGATGGC
CGGCAATGGAGCTAGCGCCTGGAGGCAGCTCACTCCGTTCCCGCTCTACCTGGCCATCTTCTTCCTTCTCGGCGCCAACG
GGGCGGAGGCGGCATCGTCCTTCAGCTTCACCAACGCGTGCGCGCACCCGGTGTGGGTGGGCGCGCTCAGCGGCGCCACC
TCGCCGCAGCTGCCCCGCACCGGCTTCTACCTCGCCCCGGGCGCGACCTCCGCGCTCGCCACGCTCTCCTCCGGCGCCTG
GTCCGGCAACTTCTGGGCGCGCACCGGCTGCGCCGTGGACGAGGGCACCGGCCGCCTCGCGTGCGCCACGGCCGACTGCG
GCACGGGCGACGTCGCCTGCGACGGCCGCGGGCCCGCCCCGCCCGTCACGCTCGCCGAGATCACCCTCGCCGCCCCCGGC
TCCGGCGGCCTCGACTTCTACGACGTCAGCCTCGTCGACGGCTTCAACCTGCCCGTCAGCATCGCGCCCTCCCA------
------CGGAGGCTGCCAGGCGGCGGCGTGCGCGGGCGACGTGAACGCCGTGTGCCCGTCGGACCTGCGCGTCGTGTCCG
GCTCAAGCGGTGAGGTGGTGGCATGCAAGAGCGCCTGCAACGCCTACGGCAGCGCGCGCTACTGCTGCAGCGGCGACTAC
GGCACGCCGGCGGCCTGCGGGCCCACCAACTACTCGCAGGTGTTCAAGGCCGCCTGCCCGGCGGCCTACAGCTACGCCTA
CGACGACGCCAGCAGCACCTTCACCTGCTCCGGCGCCGCCACCTACCACATCACCTTCTGTCCTGCCACTTAACTCATCA
ACCTCACAATCCTTATAATTAATTAATTA----ATTATAATCACACAGTGGACATGTATGCAGTTTACCTTTTTCAATGA
AAATAATATAC----AGAGTTAAAAAGGGATTACAAATCTTTATGCGTCTTTATTCTTTTTTTCTTTGAGGGGATTATGC
TTCCTTATTCAATATGTATTTTTGTAATCA-----GTAGCACAAAATGGATGAGAACAAAGCCATGCCTTTGCCGCCTCT
TA-TTTTTTGATTATTTCTTCAGCAATGTA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr1D_223
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AAACAAAAGAACTAAAA
CCCTTTTTGCATTTTTCTCTTGTCAGTTCAACCGTCACTTGACT--AAGATAGTCGTACCCGTTAATCAAGCTTCCTCAC
CATGCATGGACATATGTAGTACCCGCGTTGCGTCTTCACCGAAAAT-GGATCGGTGAACCAAAAAGGCAGATCGACCGAC
---CGATCGGTGGAATTGATGACTACTGACGTACGTACGT----GACGACATTAACTTGGTTATTACTTGG---------
----------------------------------------------------------------------------TTGC
CTTTGCTTTTTCTCATCATTATATGATGCATGGATCGATCGT----TGTAGCTAGCCCACGCCAAGCATACGGCCAAAAA
CTATCGATTAAGC-------TTTTTTTTTACCCAAAAAACTAAGAAATGACAACGTTTTTCTACCAGTTTGTTGCATCCA
TGCATGCATGTTGACAC------GTTCCCTTTAATATTTTTTCTCATCCACGCATCACCTATCCCCTCTCTAGCTAGCTA
TCTACCCTGACCTGCCTACCT---------ATTGTTCATCGATCATCGCCTGCATGCGTGCATGTACCTAATTGTTTGGC
ATGGCACGTACGTACTGTGACAAG----CAGGCTATATATAAACACGACAGCCAAGAAAGAAAGATAGC----TCCAGGT
GTTGGCTACGTATCCATCTTCGTGT----------------GATCTCACCGGCCTTGTCCTCCGAGTGACTGACGATGGC
CGGCAATGGAGCTACCACCAGGAGGCAGCTCACCCTGTTTCCGCTCCACCTGGCCATCATCCTCCTTCTCGGCGTA---G
GGGCGGAGGCGGCGACGTCCTTCAGCTTCACTAACGCGTGCGCGCACCCGGTGTGGGTGGGCGCGCTCAGCGGCGCCACC
TCGCCGCAGCTGCCCCGCACCGGCTTCTACCTCGCCCCGGGCGCGACCTCCGCGCTGGCCGCTCCGTCCTCCGGCGCCTG
GTCCGGCAACTTCTGGGCGCGCACAGGCTGCGCCGTCGACGACGCCACCGGCCGCCTCGCATGCGCCACCGCCGACTGCG
GCAGCGGCGACGTCGCCTGCGACGGCCGCGGGCCCGCCCCGCCCGTCACGCTCGCGGAGATCACCCTCGCCGCACCCGGC
TCCGGCGGCCTCGACTTCTAAGACGTCAGCCTCGTCGACGGCTTCAACCTGCCCGTCAGCATCGCGCCCTCCCA------
------CGAAGGCTGCCAGGCGGCGGCGTGCTCAGGCGACGTGAACGCCGTGTGCCCGTCGGACCTGCGCGTCGTGTCCG
GCTCAAGCGGCGAGGTGGTGGCGTGCAAGAGCGCCTGCAACGCCTACGGCAGCGCACGCTACTGCTGCAGCGGCGACTAC
GGCACGCCGGCGGCGTGCGGGCCCACCAGCTACTCGCAGGTGTTCAAGGCCGCCTGCCCGGCGGCCTACAGCTACGCCTA
CGACGACGCAAGCAGCACCTTCACCTGCTCCGGCGCTGCCACCTACCACATCACCTTCTGTCTTGCCACTTAACTCATCA
CAATCCT--------TAATTAATTAATTA----ATTAAAATCACACCGTGGACATGTAAGCAGATTATTTTCTTCAGTGA
AAATAATATAC----AGAGTAAGAACGGAATTACAAATCTTTATGCTTCCTTATTCTTTTTTT-----AGGGGATTATGC
TTCCTTATTCAATATGTATTTTGGTAATCA-----GTAGCACAAAATGGATGAGAACAAAGCCATGCCTTTGCCGCCTCT
TATTTTTCGGTTTATTTCTTCGGCAATGTACAGTCTCTCCCTCTCTCT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr5B_1084
CGGAGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---CGGCGGGTGCGAGGTCGTTCAACTTCCACAACGCGTGCGCGCACCCGGTGTGGGTGGGCGCTCTCAACGGCGCCACA
TCGCCGCGGCTCGCCCGCACCGGCTTCTACCTCGCCCCCGGCGCCACTGACGCCCTCGCCGCCCCGTCCTCCGGTGCCTG
GTCCGGCAACTTCTGGGCGCGCACCGGCTGCGCCGTCGACGCCTCCACGGGCCGCCTCGCCTGCGCTACCGCCGACTGTG
GCACCGGCGATGTCGCCTGCGCCGGCCGCGGGCCCGCCCCGCCCGTCACGCTCGCTGAGATCACCCTCGCCGCCCCGGGC
GGAGGAGGCCAGGACTTCTACGACGTCAGCCTCGTCGACGGCTTTAACCTGCCCCTCTCCATCGCGCCCGACAACAATGG
GGACGGCGGTGCCTGCCACGCCGCGGCGTGCGCGGGCGACGTGAACGCGGTGTGCCCGTCGGACCTGCGCGTGGTGTCCG
GCTC---CGGCGAGGTGGTGGCGTGCAAGAGCGCGTGCAACGCCTACGGTAGCGCGCGCTACTGCTGCACTGGCGACTAC
GGCACGCCGGCGAAGTGCGGGCCCACGAACTACTCGCGGGTATTCAAGGCCGCCTGCCCGGCCGCCTACAGCTACGCCTA
CGACGACGCCAGCTCCACCTTCACCTGCGCCGGCGCCGCCAGCTACCACATCACCTTCTGTCC-----------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr5A_1084
CGGAGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---CGGCTGCGGCGAGGTCGTTCATCTTCCACAACGCGTGCGCGCACCCGGTGTGGGTGGGCGCTCTCAACGGCGCCACA
TCGCCGCGGCTCGCCCGCACCGGCTTCTACCTCGCCTCCGGCGCCACGGACGCCGTCGCCGCCCCGTCCTCCGGCGCCTG
GTCCGGCAACTTCTGGGCGCGCACCGGCTGCGCCGTCGACGCCTCCACGGGCCGCCTCGCCTGCGCCACCGCCGACTGTG
GCACCAGCGATGTCGCCTGCGCCGGCCGCGGGCCCGCCCCGCCCGTCACGCTCGCTGAGATCACCCTCGCCGCCCCGGGC
GGAGGAGGCCAGGACTTCTACGACGTCAGCCTCGTCGACGGCTTCAACCTGCCCCTCTCCATCGCGCCCGACAACAATGG
GGACGGCGGTGCCTGCCGCGCCGCGGCGTGCGCGGGCGACGTGAACGCGGTCTGCCCGTCGGACCTGCGCGTGATGTCCG
GCTC---CGGCGAGGTGGTGGCGTGCAAGAGCGCGTGCAACGCCTACGGCAGCGCGCGCTACTGCTGCACTGGCGACTAC
GGCACGCCGGCGAAGTGCGGGCCCACGAACTACTCGCGGGTATTCAAGGCCGCCTGCCCGGCCGCCTACAGCTACGCCTA
CGACGACGCCAGCTCCACCTTCACCTGCGCCGGCGCCGCCAGCTACCACATCACCTTCTGTCC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr5D_1084
CGGAGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---CGGCGGCGGCGAGGTCGTTCAGCTTCCACAACGCGTGCGAGCACCCGGTGTGGGTGGGCGCTCTCAACGGCGCCACA
TCGCCGCGGCTCGCCCGCACCGGCTTCTACCTCGCCCCCGGCGCCACTGACGCCCTCGCCGCCCCGTCCTCCGGCGCCTG
GTCCGGCAACTTCTGGGCGCGCACCGGCTGCGCCGTCGACGCCTCCACGGGCCGCCTCGCCTGCGCCACCGCCGACTGTG
GCACCGGCGGTGTCTCCTGCGCCGGCCACGGGCCCGCCCCGCCCGTCACGCTCGCTGAGATCACCCTCGCAGCCCCGGGC
GGAGGAGGCCAGGACTTCTACGACGTCAGCCTCGTCGACGGATTCAACCTGCCCCTCTCCATCGCGCCCAACAACAATGG
GGACGGCGGTGCCTGCCGCGCCGCAGCGTGCGCGGGCGACGTGAACGCGGTGTGCCCGTCGGACCTGCGTGTGGTGTCCG
GCTC---CGGCGAGGTGGTGGCGTGCAAGAGCGCGTGCAACGCCTACGGCAGCGCGCGCTACTGCTGCACTGGCGACTAC
GGCACGCCGGCGAAGTGCGGGCCCACGAACTACTCGCGGGTATTCAAGGCCGCCTGCCCGGCCGCCTACAGCTACGCCTA
CGACGACGCCAGCTCCACCTTCACCTGCGCCGGCGCCGCCACCTACCACATCACCTTCTGTCC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr6B_2183
--------------------------------------------------------------------------------
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----------------------------------------------------------------------AATAATCTAG
ACCTACTAATATAT-GAAATAGATATTCTTAGTCCATCATG-CTATTTTATAGGAAACCCCCTGATGTTTTTGACATTAA
ACCCACAGTACATATTAAAT-----G-TT-TTTTCTAAAATACTCATATCTTCTAAACCGTAACTCCAAATTTAACATGT
TATATATGGAATTTGATTAGAAAAATATATAGAATCTGAATATGATGTTATTTT-ACCTGTTAACCAT-----TAAAAAA
AATACTATCTAGGGTGCAATCTTAATCAACAGTGTATTATCCGTCTTTCATTCATATCGGTACTGATCCGGATTGTGGAT
GAACATCTCAGCAAAATCAGGATTGGAGACGAAATTGAAGATCACTTGCCTGTTTCTTTGTATCTATTAAATCTACATGC
AAGTCGTGTTTAAATAGAAAACATATGGAATCTTGAACTTGTGCTTTTGTAGGCAAAGACCATCTTTGTTTGGGCCATAG
CTACAAATTCTCAGATTATAGACCAT-TTTTTTGTAAATTAAGAGTGTGTGGTATTCTTTTCTCCCGTTGCA-----C--
-----------------------------------------------------------
>chr5D_2185
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------TTTTCTAT
ACCTACTAATAAAA-GAAATAGGTATTCTTAGTCCGTCATG-CAATTTTATAGAAAAAACCCTGATGTTTCTGACATTAA
ACCCGCAATACATATTAAATAG---------TTTTTTAAATACTTATATCTTCTAAATCGTAACCCCAAATTTAGCATGT
TATATATGAAATTTGATTAGAAAAAAATATATAATCTGAATATGATGTTATTTT-ACCTATTAATTATTT--------AA
AATACTATCTAGGGTATAATCTTAATCAACAGTGCATTATCCGTCTTCCTTTCATATCGGTACTGATCCGGATTGTGGAT
GAACATCTCAGCAAAATCAGGATTGGAGACGAAATTGAAGATCACTTGCCCGTTTCTTTGTACGTATTAAATACACATGC
AAGTCGTGTTTAAATAGAAGACATGTGGAGTCTTGAACTTGCGCTTTTATAGGCAAAGACCATCTTTGTTTGGGCTGTAG
CTACAAATACTCAGATTATAGACTA--TTTTTTGTAAATTAAGAGCGTGTGGTATTTTTTTCTCCTGTTGCA--------
-----------------------------------------------------------
>chr1A_2186
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TATCTAT
ACCTACTAATAAAAAGATATAGGTATTCTTAGTCCGTCATG-CTATTTTATAGAAAACCCCCTGATGTTTCTGACATTAA
ACCCGCAGTACATATCAAAT-----A-TT-TTT--CAAAATACTCATATCTTCTAAACCGTAACTCCAAATTTAACATGT
TATATATGAAATTTGATTAGAAAAATATATAGAATTTGAATATGATATTATTTT-ACCTATTAACCATTTAAATAAAAAC
AATACTATCTAGGGTGCAATCTTAATCAAAAGTGCATTATCCATCTTTTTTTCATATCGGTACTGATCCGGATTGTGGAT
GAACATCTCAGCAAAATCATGATTGGGGACGAAATTGAAGATCACTTGCCCGTTTCTTTGTACGTATTAAATCTACATGC
AAGCCTTGTTTAAATAGAAGACATGCGGAATCTTGAACTTGCAGTTTTGTAGGCAAAGACCATCTTTGTTTGGGCCGTAG
CTACAAATACTCAGATTATAGACA----TTTTTGTAAATTAAGAGCGTGTGGTATTCTTTTCTCCGGTTGCAATGCACGG
GCCCTTTTGCTA-----------------------------------------------
>chr5D_2186
TATGCT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
ACCTACTAATAAAA--AAATAGGTATTCTTAGTCCGTCATA-CTATTTTATAGAAACCC-CCTGGTGTTTTTAACATTAA
ACCCGCAATACATATCAAAT-----GTTT-TTT--TAAAATACTCATATCTTCTAAACCGTAACTTCAAATTTAACATGT
TATATATGGAATTTGATTAAAAAAATATATAGAATCTGAACATGATGTTATTTT-ACCTGTTAACCATTTAAAAAAA---
-ATACTATCGAGGGTGCAATCTTAATCAACAGTGCATTATCCGTCTTTCTTTCATATCGATACTGATCCGGATTGTGGAT
GAACATCTCAGCAAAATCAGGATTGGAGACGAAATTGAAGATCACTTGCCCTTTTCTT-GTACGTATTAAATCTACATGC
AAGCCGTGTTTAAATAGAAGACATGTGAAATCTTGAACTTGCGCTTTTGTTGTCAAAGACCATTTTTGTTTGGGCCGTAG
CTGCAAATACTCAGATTATAGACCC--TTTTTTGCAAATTAAGAGCGTGTGGTATTCTTTTCTCCCGTTGCAACGCACGG
GCCCGTTTGCTAGTTA-------------------------------------------
>chr7A_2186
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TATCTAC
ACCTACTAATAAAA-AATATAGGTATTCTTAGTCCGTCATCGCTATTTTATAGAAAACCCCCTGATGTTTTTTACATTAA
ATCCGCAGTACATATCAAAT-----G-TT-TTT--TAAAATACTCATATCTTCTAAACCGTAACTCCAAATTTAACATGT
TATATATGAAATTTGATTAGAAAAATATATAGAATCTGAATATGATGTTATTTT-ACCTTTTAACCATTTTAAAAAA---
-GTACTATCTAGGGTGCAATCTTAATCAACAGTGTATTATCTGTCTTTCTTTCATATCGGTACTGATCTGGATCATGGAT
GAACATCTCAGCAAAATCAGTATTGGAGACGAAATTGAAGATCACTTGCCCGTTTCTTTGTACGTATTAAATCTACATTC
AAGCCGTGTTTAAATAGAAGACATGTGGAATCTTGAACTTGCGCCTTTGTAGGCAAAGACCATCTTTGTTTGGACCATAG
CTACAAATACTCAGA-TATAGACCA--TTTCTTGTAAATTAAAAGCGTGTGGTATTTTTTTCTCCCGTTACAACGCACGG
GCCCTTTTGCTA-----------------------------------------------
>chr3A_2186
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------TATCTAT
ACCTACTAATAAAA-TAAATAGGTATTCTTAGTCCGTCATG-CTATTTTATAGACAAACCCTTGATGTTTCTGACATTAA
ACCCGTAGTACATATCAAAT-----G-TT-TTT--TAAAATACTCATATCTTCTAAACCGTAACTCCAAATTTAACATGT
TATATATGAAATTTGATTATAAAAAATATAAAAATCTGAGTATGATGTTATTTT-ACTTGTTAACCATTTAAA-----AA
---ACTATCTAGGGTGCATTCTTAATCAACAGTGCATTATCCGTCTTTTTTTCATATCGATACTGATCCGGATTGTGGAT
GAACATCTCAGCAAAATCAGGATTAGAGACGAAATTGAATATCACTTGCTCGTTTGTTTGTACGTATTAAATCTACATGT
AAGTCGTGTTTAAATAGAAGACATGTGAAATCTTGAACTTACGCTTTTGTAGGCAAAGACCATCTTTGTTTGGGTCGTAG
CTACAAATACTCAAATTATAGACCA--TTTTT-GTAAATT-AAAGCGTGTGGTATTCTTTTCTCCCGTTGCAACGCACGG
GCCCTTTTGCTA-----------------------------------------------
>chr6D_2187
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------ATCTAT
ACCTAATAATAAAG-GAAATAGATATTCTTAGTTCGTCATC-CTATTTTATAGAAAAAATCCCGATGTTTCTGACATTAA
ACCCGCAGTACATATCAAAT-----G-TTTTTT--TTAAATACTCATATCTTCTAAATTGTAACTCCAAATTTAACATGT
TATATATGAAATTTGATTAGAAAAATATATAGAATCCAAATATGATGTTATTTT-ACCTGTTATCCA-TTAAAAAAA---
-ATACTATCTAGGGTGTAATCTTAATCAGCAGTGCATTATCCGTCTTTCTTTCATATCGGTATTGATCCGGATTGTGGAT
GAACATCTCAGCAAAATCAGGATTGAAGATGAAATTGAAGATCACTTGTCTGTTTCTTTGCACGTATTAAATCTACATGC
AAGCCATTTTTAAATAGAAGACATGGGAAATCTTGAACTTGCGCTTTTGTAGGCAAAGATCATCTTTGTTTGGGCCGTAG
CTACAAGTATTCATATTATAGA-CC--TTTTTTTTAAATTAAGAGCGTGTGGTATTTTTTT-TCCCGTTGCAACGCACGG
GCCCTTTTGCTAGTTATAA----------------------------------------
>chr2A_2189
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTAT
ACCTACTAATAAAG-CAAATAGGTATTCTTAGTCCGTCATG-CTATTTTATAGAAAACCCTCTGATGTTTCCGACATTAA
ACCTGCAGTACATATCAAATCAAATG-TTTTTT--TAAAATACTCATATCTTCTAAACTATAACTACAAATTTAACATGT
TATATATGGAATTTGATTAGAAAAATATATAGAATCTGAATATGATGTTATTTT-ACCTATTAACCATTTAAAAAAA---
-ATACTATCTAAGGTGCAATCTTAATCAACAGTGCATTATCCGTCTTTTTTTCATATCGCTACTGATCCGGATTGTGGAT
GAACATCTTAGCAAAATCAGAATTGGAGACGAAATTGAAGATCACTTGCACGTTTCTTTATACGTGTTAAATCTACATGC
AAGCCGTGTTTAAATAGAAGACATGTGAAATCTTGAACTTGCGCTTTTGTAGGCAAAGACGATCTTTGTTTGGGACATAG
CTACAAATACTCAGATTATAGACCA--TTTTTTGTAAATTAAGAGTGTGTGGTATTCTTTTCTCTCGTTGCA--------
-----------------------------------------------------------
>chr6D_2191
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AT
ACCTACTAATAAAA-TAAATAGGTATTCTTAGTCTGTCATA-CTATTTTATAGAAAACCCCCTGATGTTTCTAACATTAA
ACCCGCAGTACATATCAAAT-----G-TT-TTT--TAAAATACTCATATCTTATAAACCGTAACTCCAAATTTAACATGT
TATATATGGAATTTGATTAGAAAAATATATAGAATCTGAATATGATGTTATTTTTACCTGTTAACCATT---AAAAA---
-ATAGTATCTAGGGTGCAATCTTAATCAACAGTGCATTATCCTTCTTTCTTTCATATCGGTACTGATCCGGACTGTGGAT
GAACATCTCAGCAAAATCAAGATTGGAGATGAAATTGAAGATCACTTGCCCGTTTCTTGGTACGTATTAAATCTACATGC
AAGCCGTGTTTAAATAGAGGACATGTGG-ATCTTGAACTTGCGCTTTTGTTGGCAAAGACCATTTTTGTTTGGGCCGTAG
CTGCAAATATTCAGATTATATA-CCATTTTTTTGTAAATTAAGAGCGTGTGGTATTCTTTTCTCCCGTTGCAACGCACGG
GCCCTTTTGCTATATCTACT---------------------------------------
>SNPs
--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------
--------------SSSSSSSS-------S----S---------------------------S---------S-------
--------------------------------------------SS--------------S-----------------S-
---------------S-----------------------------SS----------------------------S-S--
SSS-----------------------------------------------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
-------------------S---------------------SS-------------------------------------
----------------------------------------------S---------------------------------
------------------------------------S---------------------------------------S---
-----------S-----------------S----------------------------------S-------SS------
------------SS-S-SSSS--------------------------S--------------------------------
-------------------S----------------S-------------------------S-S-------S-------
-------------------S------S----------------------S--S--S------------------------
-------S--------S------------S------S----S---------------------S----------------
-------------------------------------------S-------S----------------------------
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-------------------------------------------------------------------S------S-----
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------S-------------------------S-----------------------------------------------
-----------------------------SSSS-----------S----------------------S------------
---------SSSSSS-----------------------------------------------------------------
-------------S----------------SSSSS---------------------------------------------
--------------S-------------------SS---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
-----S---------------------S---S--S-------S---------S-S----S---S----------S-----
------------------------------------------------------------------S-------------
--S------------------------S----------------------------------------------------
--------S------------------------------------------S----------------------------
S---S-----S------S---------------------------SS-----------------------S---------
--------------------------S------------------------------S----------------------
-------S--------------------------------------S--------------------S------------
------------S---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_127
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---------------------------TCGGAGGGAGAATGGCTGTA---------------------------------
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>reverse_2159
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------------------------------------------------------------------------------GG
TGTCAGCCTGATGTAGCC--------------------------------------------------------------
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