>input_sequence_68886
--------------------------------------------------------------------------------
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--------------------ATGGCCGGCTGCGGAGAGGAACTGAAGTTGCTGGGCATGTGGGCGAGCCCGTTCGTGGTG
CGGGTGCAGATCGCGCTTCGCCTCAAGGGCTTCAGCTACGAGTACGTGGAGGAGGACCTGCAGAACAAGAGCGAGCTGCT
CCTCAGGTCCAACCCTGTCCACGCCGGCAAGGTGCCGGTGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCGGTCA
TCCTGCGGTACATCGACGAGGCCTTCTCCGGCGCCGAGCCGTCCCTCCTCCCCGCCGACGACCCCTACGGCCGAGCCATG
GTTCTCTTCTGGGCCGCTTTCATCGACGACACGGTAGGTGCATACATGTTGC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
GAGTACTACCTCACCCTCACATGGCGGCGTGCGTTCATGTATACCTTTTTCA--GTGCAGCTGTTGAAGGCGCGGAGCCA
GGCGTTGAGAGGCGAGACGGGCGAGGAGAAGGAGCAGGGGAGGAAGAAGGCGGCCGCGGCCATGGCAACCTTGGAGGGGG
TGTTGAGGGAGTCCAAGGCGAGGTTCTTCAGCGGCAGGGATGGACCCGGCTACCTGGATATCATGCTCGGCAGCCTCCTC
GGCTCGATGCGCGCGACGGAGGAGATATGTGGGCTCCAGACCTTCGACCCGACCACCACGCCGCTCCTGGCCGCATGGGC
GGAGCTCTTCTGCGCGCTGGACGCGGTGGAGCCGGTCATGCCGCGCGTGGAGAGGCTCGTCGAGTATGCCGAGGCGAC--
-GCAGCCTCGGACCGCCGTGTCCAGCACCACCAACTAA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----
>chr5D_1_TraesCS5D01G027300
GTCCCGCTCGGCCTAGTTAGTGTACGTCTATTTTGCCTTTATTTACTGCTGTTATATCTCTTATCATTGTGCGTGCAATA
TGTGCATCAATTAATATTGATCGGAC-----GGAGTAGTATATATTGTTTAGAAAAAAGAAAGAAATAAACATGTGATGA
TGAGTTGACGGAGATGACGGAGCACCACCCCACATTGTGTATATGTATATAACTGAGGCATGACCCAGAAGGCAAAACAT
GTATAAGAATATATATATAAGTGGGGCGCCCACGCTACAATAAGAACTACAGTTGTAAATCTCCTCGCTTGTTTGTCTCT
TTCTTTTTTATCATCATTTATACAGTAACTTACTCCCTCCGTCCCATAATATAAGAACGCTGTTGACACTACAGGTAGTG
TAGAAAACGTTCTTATATTA-GGGACGGAGGGAGTATCATTTGTTTGTCTCTTTACTTTTCATCATCCCACAACACGTGC
GAGCATAGCGCTTC-------GTTCCTCTGCACACCAGAGACAGCTATAGGCCTAACTGAATGGAAGGCATGCCGTCAGA
GCTATTCTAGTGGAAGTATTACTCAATAATTTGATCTGTTCA--------------------------------------
---------------------------------------------TGCCAATAGGTTTGATTCAGATACATACTCATTCA
TGCCAACTTTTCTGTTCAGTTCAGGTTAAATACCCAAAGAGACTGGACTTGAAA--------------------------
---------AGAGAAAGAAGATGAGAGACAGAGAAGAACAGGT-----TAGATTCAGATACACGCGCAGTCATGCCAACT
CCTCTGCTCGATTCTGTTGT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GGGTTGCACGAGACGTCACAACGAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ACTGTATCAGAT--TATATAGTGTACACAAGGTA-GGCACGAGACGTCACACGATGTTATTATATAGTG-----
--------------------------------------------------------------------------------
--------------------------------TATAAGTGGTAGCAGTACCGCGCTTGGTCATCGAGTCCTTTGAAGTC-
-AGAAAATCAATCAACAAGGCCGGCAATTAAGAAAGGAAAGGAGCAAAGGAGACCGATGTTGAGAGAGTAG-CAAGGCAA
AGCAAAGCAGTAGGAAGGGAATGGCCGGCTGCGGAGAGGAACTGAAGTTGCTGGGCATGTGGGCGAGCCCGTTCGTGGTG
CGGGTGCAGATCGCGCTTCGCCTCAAGGGCTTCAGCTACGAGTACGTGGAGGAGGACCTGCAGAACAAGAGCGAGCTGCT
CCTCAGGTCCAACCCTGTCCACGCCGGCAAGGTGCCGGTGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCGGTCA
TCCTGCGGTACATCGACGAGGCCTTCTCCGGCGCCGAGCCGTCCCTCCTCCCCGCCGACGACCCCTACGGCCGAGCCATG
GTTCTCTTCTGGGCCGCTTTCATCGACGACACGGTAGGTGCATACATGTTGC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
GAGTACTACCTCACCCTCACATGGCGGCGTGCGTTCATGTATACCTTTTTCA--GTGCAGCTGTTGAAGGCGCGGAGCCA
GGCGTTGAGAGGCGAGACGGGCGAGGAGAAGGAGCAGGGGAGGAAGAAGGCGGCCGCGGCCATGGCAACCTTGGAGGGGG
TGTTGAGGGAGTCCAAGGCGAGGTTCTTCAGCGGCAGGGATGGACCCGGCTACCTGGATATCATGCTCGGCAGCCTCCTC
GGCTCGATGCGCGCGACGGAGGAGATATGTGGGCTCCAGACCTTCGACCCGACCACCACGCCGCTCCTGGCCGCATGGGC
GGAGCTCTTCTGCGCGCTGGACGCGGTGGAGCCGGTCATGCCGCGCGTGGAGAGGCTCGTCGAGTATGCCGAGGCGAC--
-GCAGCCTCGGACCGCCGTGTCCAGCACCACCAACTAAGAGC----AGATGAGCTCTGCGCGCAGTCGCGTGTTTGTTCT
GCAATGAGCGCGGCTTGTCAA----------------------------------------------ACTATTGTGTTCA
CCAAATACTTTAAATT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AAGAA
AAAAAGGATACATAGAGCTGATGCATTT-TTTGACACATTTTCACTTCCATCCGCCCCACATACGTGTGTCTGTCAGTAT
ATATTTTCCAGATGGAAAGGAAAATCTTCACGACCCCAGGTGATATGAGCATGCCACGTCGCGCATGAGCAGGGAGATTT
GACAAGTCTTGGTTTCTCGACAAAATTTGTCCTTTTCCTGGATACATTAGATCTAATGAGAGGACGGCATGCTGCCCCTG
ATTAGCATC-----------------------------------------------------------------------
------------------------------------------------------GTGGCTTGATGCGTACGTGTGAC---
----GGCTGTCGCGATACAATCCTGCGGTATTTGCCACCTATGGGAAATGGTGCTTCGTATAACTGTTGCCTTGCGGTGG
ACGCCCGATGTGCCGCTACGGCCGAATAGGGCTTGTACAAAATCATCGTACAAATCCATGCGGCTGGTACAAAATCACGT
TTTTTTATGGGGAAAGAGTGTTAGACAAAACAAAAATAAACGAAACACGAGAGACACAAATTTTTACGTGGAAACCCTTG
CTGGAGAAAACTACGGAGGCACAAAGGCGCAATCACTCTGATGGAGATGTATTACAAGCACGAGACAACAGATGTAGTAC
AAAGTTGGGTCATCTATTTTGGAATGGAGGTACATGGCAAATTTACTAGAACACACGTGGCAATTTTTACTCCACTTTGC
CATGATAAAATTTTACTTTTTCATTGCCATCTTGCCATGGCAACTTTTTACCTTTCATTGCCATGGCAAATTTTACTTTA
TTTTTTACCATGCCAAATTTCACCTTATTTTGGCATGGCAAAA--TTTTTACCTTTATTGCCATGGTGGCAAAT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TTTT
TATTTGAACGCACATGGTACACTTTTTTTTTGTGTTTGTACATGTTGGCAATTGTTAATCCACATATTTTGCCACCATGC
ACAC
>chr5A_83
--------------------------------------------------------------------------------
--TGCCTCAGTTAATATTGATCGGATCCGAGGGAGTAGTATATATTGTTTAGAAAGAAGAAAGAAATAAACATGTGATGA
G----TGACGGAGATGACGGAGCACCACCCCTCATCGTGTATGTG--TATAACTGGGGCATGACCCAGAAGGCAAAACAT
GTATAAGA--ATATATATAAGTGGGGCGCCCACGCTGCAATAAGAACTACAGTCGTAAATCTCCTCACTTGTTTGTCTCT
TTCCTTTTCATCATCATTTATACAGTAACTTACTCCCTCCGTCTCATAATATAAGAACGCTGTTGACACTATA-GTAGTG
TAGAAAACGTTTTTATATTATGGGACGAAGGAAGTATCATTTGTTTGTCTCTTTACTTTTCATCATCCCACAACACGTGC
GAGCACAGCGCTTC-------GTTCCTCTGCACACCAGAGACAGCTCTAGGCCTAACTGAATGGAAGGCTCGCCGCCAGA
GCTATTCTAGTGTAAGTATTACTCAATAATTTGATCTGTTCA--------------------------------------
---------------------------------------------TGCCAACAGGTTTGATTCAGATACATGCTCATTCA
TGCCAACTTTTCTGTTCAGTTCAGGTTAAATACCCAAAGAGACAGGACTTTAAA--------------------------
---------AGAGAAAGAAGATGAGAGACAGAGAACAACAGGTTAGGTTAGATTCAGATACACGCGCATCCATGCCAACT
CCTCTGCTCGATTCTGTTGT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GGGTTGCACGAGACGTCACAACGAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ACTGTATCAGAT--TATATAGTGTACACAAGGTA-AGCACGAGACGACACACGATACTATTGGTTTATACTATC
GTT----------------CTACCCGGCGTTTCTTCTTT--AAAAAGGTTACCCGTGAATTATCTTGCACAGCACAAGAC
GTGACACAATACTATTAGTTTATTCTACTA--TATGAGTGATACTTG-----------------------------GTC-
-AAAAGATCAATCAACAAGGCCGGCAATTAAGAAAGGA-----GCAAAGGAGACCGATGTTGAGAGAGTAG-CAAAGCAA
AGCAGC-----AGGAAGGGAATGGCCGGCTGCGGAGAGGACCTGAAGCTGTTGGGCATGTGGGCGAGCCCGTTCGTGGTG
CGGGTGCAGATCGCGCTCCGCCTCAAGGGCCTCAGCTACGAGTACATGGAGGAGGACCTGCAGAACAAGAGGGAGCTGCT
CCTGAGGTCCAACCCTGCCCACGGCGGCAAGGTGCCGGTGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCCGTCA
TCCTGCGGTACATCGACGAGGCCTTCTCCGGCGCCGGGCCCTCCCTCCTCCCCGCCGACGACCCCTACGGCCGAGCCGTC
GCTCTCTTCTGGGCCGTTTTCATCGACGACACGGTAGGT----ACATATTGC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
GAGTACTACCTCACTCTCACATGGCCGCGTTCATGTA--TA--CCGTTTTCAATATGCAGCTGTTGAAGGCGCCGAGCCA
GGCGTTGAGAGTCGCGACGGGCGAGGAGAAGGAGGAGGGGAGGAAGAAGGCGGCCGCGGCCATGGAAACCTTGGAGGGGG
TGCTGAGGGATTCCGAGGCCAAGTTCTTCAGCGGGAGGGACTGCCCTGGTCTCGTGGACGTCATGCTCGGCGGCCTCCTT
GGCTCGATGCGCGCATCTGAGGAGATGGGTAGGCTCCAGACCTTCGACTCGACCACCACCCCGCTCCTGGCCGCTTGGGC
GGAGCTCTTCTGCACGCTGGACGCGGTGGCGCCGGTCATGCCGCGCGTGGAGAGGCTCGTTGAGTATGCCGAGGCGATGC
AGCAGCCTCGCACCGCCGTGTCCCGCACCACCAGCTGAAAGCGGAAAGATGAGCTCTGCGCACAGTCGTCTGTTTGTCCT
GCAATAAGCGCGGCTTGTCAAGAAAATAATGCTCTCTTATTTTTGTATGGATGAGTGTTGGTATAAAACTATTGTGTTCT
CAAAATACTTTAAATCTCTAGTACTTATAAAAAAACCGTAAGGTTCTGTTTTATCTTTCTTTCCATCTCTCTTTTGTCCA
ACTTTTCCCGTATAGTAATCAATCATCTTAATTTACTTACTTTTTGAATCAGTTTTGATTTAATTTAGTTACCCAACTTC
TGATCAAAATATAAGGCAAATCATCGGCAGAATTTGATAAGTATTTAGTTAAACAATCGCATACTATGGGCAGGTAAGGG
GCTGTTTGGTTTTAGGCCTAGCATTGTCACACTTCGCCACACATTTTTGCTAACCTTGCCTAACCTTAGTTCATCAAAAT
GAAAGCCACAAGTTGGCAAGCCTAAGGAAATCTTACCACACTTTTTGTGTGTATGCCATGTGGGGCTCAAGTGTGGTCTG
CCTGTGGCTTGAACCAAACACTCACCTAAGTTAGTCAAACTTGCCTACAACCTTTGGCAAAGTTAGTCACAAACCAAACA
GCCCCTAAATCATTTCTGACTGAAATATAAGATAAATCACGGACATAATTTGATGAATATTTATTTACACAGTCATATAT
TATGGGCAGGTAAATCACAAGCTAACACACTAGAATATTTATATTCCGTTGCAAGCACAGGCATTATTCTAGTTGAAGAA
AAAAGAGATACATAAAGCAGATACATTTCTTTCACACATTTTCACTTCCATCTGCCCCACATACGTGTGTCTGTCAGTAT
ATATTTTCCAGATGGACTGGAAAATCTTCATGACCCCAAGTGATATGAGCATGCCACGT--CGCATGAGCAGAGAGATTG
GACAAGTCTTCGTTTATCGACAAAATTTGTTCTTTTGCTGGATATATTTTAG----TGAGAGGACGGCATGCTGCCCCTG
ATTAGCGGACGCGGCTCCTCTGACGTACGGCCCACACACTGCCGTGTGGGCCTGAACCCACCTGTCAGTGGCCCCACGTC
AGGGGGCCACGTCAGGGGGCCGTATGTCAGGGATCCTGCTCCCTGATTAGCACGGTGGCTTGATGCGTACGTATGCAGAT
GGATGGCTGTCGTGATACAATCCTGCGGTATTTGCCACCTATGGGAAATGGTGCTTCGTATAATTGTCGCGTTGCGGTGA
T-GCCCGGTGTGCCGCTACGGCCGAATAG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr5D_429
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TATCATAGGTTTGTCTCTTTACTTTTCTTT---CCACAACACGCAT
GACTGCCTCAGCATTGCCCTTGTTCTTCTGCACACCAGAGAGAGCTATAGGCCTAACTGAATGGAAGGCATGCTGTCAGA
ACTATTCCAATGGAGGTATTACTTGATCATTTGATCTTTGTTTCTGGCTAGTTCATTAGTGCAATTGGTTTTCTTTTCGA
GCTGCCATTGCTACCAGATGACCAGCTTGTTGCACAAACTTTTACTGTGGATACCTCAGCTTTAGCTGCAAGCTCAACCA
TGTGCTCCGGAGTGTGACGACCTGACTGCCACAGGGATCGAGATCACACCAGGGGAGAGAGAAGGTAGATGAAAGGGGAC
GAGACTTGGAGAGGAAGAAGATGAGAGACAAAGAACAACAGGT-----GAGATTCAGATACATGCTCGTTCATGCCAACT
CCTCTCTTCGGTTCAGCTTAAATACCAACACGCTGCCAGCCTGGCCATAGGCCACACACATTCACACGTGTTAAAATTAT
GTGCTTAACATATGTGTACAAGTTGTGCTATTTTTTTTAGAAAAGGAGGATGACCCCCGGCCTCTGCATCTGGGCGATGC
ATACGGCCACTTTATTTACAAGTTGTGCTATAGTTTAAATTGTAATTAGCGGACAGCTAGGTGATTGAGTCAGTACATGT
GTAATCTGAAATTATTATATGTATGGTCCCATGGGTAGACTAGAAATAAGCTGTAAGCTAATTAAGTTACAGATCACGAG
AGGGAAGGTCCGAGCCGTGCGCGTCGCAGTGGTGGAAGCGTTGTTTGATGGTTTAGAGCATCTACAGCCGGACTTGACAA
ATCCGACCCCTCAAACATCCGGGCACGTCCGTCGACAGTGACCGGTCACACCACAAATAATTGATTCCGCATATGGATAC
CTCAAGTACAAACTATTACATGCAACGTAAACCTAATATTAAGCAGAGCCCGTCCAGGTCTGCCGTGTCCATGTCCGGCA
GCCGGCTCCGCCCCTCAGAGTGTGGGTCCGCTCGCCGGCGAGGTAGAGTAGGACATTGGACACGACCCGACACATGGGAC
TCAAGGCGCCACCGTCTCCCATTGCCCTATTCCTCCTCGTCGGAGGCCGTGATGGATCCGTCCTGGGAGGAGCTGCCAAC
ATCCACCATGACACGGGTGCGGCGCGCGGGGTTGCAGGCCATCCGTCGGGGCGCCGGAGAATGCGACTTCACCTCTCCAA
CGTCCACTGCTGCGAGGGCCGGCACCGCCTCCCGCGCCCACTGCGTCGCCGAGCATGCCGCGCCATGTTTTTGTCGGACG
ACGCCTATGGTGCGTCTGTGGCCTCGACTCGTCAACAGAGGGGTTGCACGTCATCCACCGCATTCGGACACCAGACGGAC
CGCAGCGCCTCCGGTGAGGCAGTGACGGCATACCTAGCGCCGGATCCATGCCATTTGGGCGGATACAATGGATTCCCGAC
GGAAGGAGTCCGAGCGTTGCCTCGCAGGGGCTTCCTCCCAGGAGTGGCCGAGCGCAAGCCGGACAACCATCTCCTCCTCG
GGGCCGCGTGGGATGAGCTCAGGGTCGACAGTTCTGGAGGTGAAGGACTCGAATCCGTTGCCCGCCATGTCAGAGAAGGC
TAGAGATCGCCGGAGGGGAGCTTGGGTTGCGGAGTGGAGTGGAGTTAAATCGCTAGGCTTTGCTCTGACACGACGAACAC
GTCCGAGTATTTTATATCCGCCTTATATTTGGGTTAGATACGAGGGATGCCAGTCAGCCCGGCCGTTTAAGGGCTGTAAC
TTATTGACTGTATCACGTTATATATAGTCTACAGAAGGTAAAGCACGAGACGTTGCACGAGACAAATGTGCAACTCCCTT
GAAGTAGTACTGTCATATGCTACCCGGTGTTTCTTCTTAAAAAAAAGGTTACCCGTGAATTATCTTGCACAGCACCAGAC
GTGACACGATACTATTAGTTTATACTACTA--TATGAGTGGTAGTACGTACGTGCTTGGTCGTTGAGTCCTTAAAAGTAA
AAAAAATTCAATCAACAAGGCCGGCAATTAAGAAAGGA-----GCAAAGGAGACTGATGTTAAGAGAGTAG-CAAAGCAG
TAC------GTAGGAAGGGAATGGCCGGCCGCGGAGAGGAGCTGAAGCTGCTGGGCATGTGGGCGAGCCCGTTCGTGGTG
CGGGTGCAGATCGCGCTCCGCCTCAAGGGCCTCAGCTACGAGTACGTGGAGGAGGACCTGCAGAGCAAGAGCGAGCTGCT
CCTGAGGTCCAACCCTGCCCACGCCGGCAAGGTGCCGGTGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCGGTCA
TCCTGCGGTACATCGACGAGGCCTTCTCCGGCTCCGGGCCCTCCCTCCTCCCCGCC---GACCCCTACGGCCGAGCCGTC
GCTCTCTTCTGGGCCGTTTTCGTCGACGACACGGTAGGTGCATACATAATGC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
G----CTACCTCACCCTCACATGGCCGCGTTCATGTA--TATACCGTTTTCA--GTGCAGCTGTTGAAGGCGCGGAGCCA
GGCGTTGAGAGGCGAGACGGTCGAAGAGAAGGAGGAGGGGAGGAAGAAGGCGGCCGTGGCCATGGAAACCTTGGAGGGGG
TGTTGATGGAGTCCAAGGCGAGGTTCTTCAGCGGCAGGGATGTACCCGGCTACCTAGACATCATGCTCGGCGGCCTCCTC
GGCTCGATGCGCGCGACGGAGGAGATGTGTGGGCTCCAGACCTTCGACCCGACCACCACGCCGCTCCTGGCCGCATGGGC
GGAGCTCTTCTGCGCGCTGGACGCGGTGGAGCTAGTCATGCCGCGCGTCGAGAGGCTCGTCGAGTATGCCGAGGCGATGC
AGCAGCCTCGCACCGCCGTGTCCAGCACCACCAACT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----
>chr5B_794
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------TATCAGGT--TATATAGTGCACAGGAGGCA----------------------------------------
----------------------------------------------------------------------AGCACGAGAC
GTCACACGATATTATTATATAATGTATGAGACTATGAGTGGTAGCAGGTACGTGCTTGGCCGGCAA----TTTAAAGTC-
-AAAAAATCAATCAACAAGGCCGGCAATTAAGAAAGGA-----GCAAATGAGCTCGATGTTGAGCGAGTAGCCAAAGCAA
AGCAAC-----AGGAAGGGAATGGCCGGCTGTAGAGAGGAGCTGAAGCTATTGGGCATGTGGGCGAGCCCATTCGTGGTG
CGGGTGCAGATCACGCTCCGCCTCAAGGGCCTCAGCTACGAGTACGTGGAGGAGGACCTGCAGAACAAGAGCGAGCTGCT
CCTGGGGTCCAACCCTGTTCACGGCGGCAAGGTGCCGGTGCTCATCCACAACGGCAAGCCCGTCTGCGAGTCGTCGGTCA
TCCTGCAGTACATCGACGAGGCCTTCTCCGGCGCCGGGCCCTCCCTGCTCCCCGCCGATGACCCCTACGGCCGAGCCGTC
GCTCTCTTCTGGGCCGCATTCGTCGACGGCACGGTAGGTCCATATTGCTTATTACTCTCCCTGTTTCTTAATACTCCCTC
CATCCAAAAAATATTTGTCATCAAAATGATTAAAAATAGTTGTATCTATCCCTTTTATTCATTTTGATGACAACTATTTC
CGAACGGAGGGAGTATAAGTCTTTGTAGAGATTCCACTAAATGGACTACATACGGAGCAAAATAAATGAATCTAAACTTT
AAATGCATCTATATACATCTTTATGCGATTTACAGTAAAATCTCTATAAAGACTTACATTTAGGAACGGAGGGAGTAGTT
A----CTACTTAACCCTCACATGGCCAAGTTCATGTA--TA---CGTTTTTA--ATGCAGCTGCTGAAAGCGCGGAGCCA
GGCGTTAAGAGGCGAGACAGGCGAGGAGAAGGAGGAGGGGAGGAAGAAGGCGGCCGCGGCCATGGAAACCTTGGAGGGGG
TGTTGAGGGAGTCTGAGGCCAAGTTCTTCAGCGCGAGGGACGGCCCCGGTCTCGTGGACGTCATGCTCGGCGGCCTCGTT
GGCTCGATGCGCGCGACGGAGGAGATGTGTGGGCTCCAGACCTTCGACCCGACCACCACGCCGCTCCTGGCCGCATGGGC
AGAGCTCTTCTGCGCGTTGGACGCGGTGGCGCCGGTCATGCCGAGTGTCCAGAGGCTCGTCGAGTATGCCGAGGCGATGC
AGCAGCCTCGCACCGACGTGTCCAGCACCACCAACT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr5D_1090
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CTTAGCCACGAGTACGTGGAGGAGGACCTGCAGAACAAGGGTGAGTTGCT
CCTGAGGTCCAACCCTGTCCACGGCGGCAAGGTGTCGATGTTCATCCACAACGGCAAGCCTGTCTGCGAGTCGTCCGTCA
TCCTGTGGTACATCGACGACGCCTTCTCCGGCGCCGGGTCCTCCCTCCTCCCCGCCGACGACCCCTACGGCCGAGCCGTC
GCTCTCTTCTGGGCCGCTTTCGTCGACGATATGGTAGGTGCATACATAATGC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
G----CTACCTCAACC-CAGATGGCCGCGTTCATGTA--TATACCGTTTTCA--GTGCAGCTGTTGAAGGTGCGGAGCCA
GACGTTGAGAGGCGAGACAGGCGAGGAGAAGGAGGAGGGGAGGAAGAAGCCGGCCGTGGCCATGGAAACCTTGGAGTGGG
TGTTGAGGGATTCCAAGGCGAGGTTCTTCAGCGGCAGGGACGAACCCGGTTACTTGGACATCGTGATCGGTGGCCTCCTT
GCCTCGATGCGTGCATCGGAGGAGATGGGTGGGCTCCAGACCA--------------------CTCCTGGCCGCATGGGC
GGAGCTCTTCTGCGCGCTGGACGCGGTGGAGCCGGTCATGCGGAGCGTCGAGAGGCTCGTCG-GTATGCCGAGGCGATGT
AGCTGCCTCGCACCACCGTGTCCAGCACCACCAACT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr4B_2498
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TACATGGCAAATTTACTAGAACACACATGGCAATTTTTACTCCACTTTGC
CATGATAAAATTTTACTTTATTTA-------TTGCCATGGCAACTTTTTTCCTTTCATTGCCATGGCAAATTTTACTTTA
TTTTTTGCCATGCCAAATTTCACTTTATTTTGGCATGGAATTTTTTTTTTACCTTTATTGCCATGGCAACTTTACTTTTG
AATACATGGTAAATTTACTTGAACATACATGGCAATTTAATTTTTACTCTACTTTTCCATGATAAAATTATTATTTCTTT
GCCATGGCAACTTTTTACCTTTCATTGCCATGTCAAATTTATTTACATACATGGCATATTTTACTCTATTTTTTGCCATG
CCAAATTTCACTTTATTTTTCATGACAAAATTTTACCTTCATTGCCATGGCAACTTTACTTTTAAATACACGACAATTTT
TACTTGAACGCACATGGAACACTT-TTTTTTGTGTTTGTACATGTTGGCAATTGTTAATCCACATTTCTTGCCACCATGC
ACAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS---S---S---------------S-----------------------------S------------------------
SSSSS--------------------------S---S------S--SS--------S------------------------
--------SS--------------------------S----------------S------------S-------------
---S----S----------------------------------S---------------------------S-S------
-----------S---------------S---S------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------S-----------------------------
-----------------------------------S--------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-------------------SS----S-S--S-S-----
--------------------------------------------------------------------------------
-----------------------------------S-----------SSS--S--------S-----------S------
--S-----------------------------------SSSSS--------------------------------S----
-----SSSS-------------------------------S------S--------------------------------
-----------------S------------S-------------------------------------------------
---S----------------------------------------------------------------------------
------------------------------------S---S------------------------------------S-S
-S---------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S----S-S-SS-SS------S----------------------------------
----------------------------------S------------------------------S--------------
----------------------------------------------------------S------------S--------
--------------------------S-----------------------------------------------------
-----------------------------------------------------------------------------S--
----------S-------------------------S-S----------------------S------SS-------S--
-----S-------------------------------------------------------------------------S
-S-------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----SS--------S---S---S---------S-------------------S---------------------------
----------------SS------------S-------S--------------------SS-----------S------S
----------S----S--------------S-----S-------S---SS-SSSSS------------------------
------SSS-----------------------------------------------------------------------
------------------------------------------------------------------------S--SS---
------------S--------------------------------------------------S---S--S--------S
SS-----S---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------S-----------------------
-------------------S-SSSSSSSSSS------------------S------------------------------
------S----------------S--------------S-SSS-----------------------SSS-SSSS------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S--------------S------S----------------------------------------S-S------------
----
>forward_2303
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CACGAGACGTCACACGATGT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>reverse_4927
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CGTACAAATCCATGCGGCTG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
