>input_sequence_68885
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ATGTTCCGACGCCTTTCCAACAC
ACTCACCATGAGCCCAACAGCAGCACTGGCATCTGGTATGACCAGCCAGCACCACCAGCTTCAGCAGCGTGCACCGGTGA
GCGGCACGTCCAAGGGCAAGGCCAAGCTCAAAGCTGGGATGCCTCTCAGGCGTAGCGTCATAGCGAAGAAGGGGGGGCGC
GCCTGCCACTGCTGGGAGCGGTGGCACTGGCCGTGGTCGCCGTGAAGCCATCGAGCGTATTACTCAGATTGCAGAGTCTT
GTCTGAAGTCCTCTACTCCTCTGCGGCACCTGTCCCCCAAGGAGCGTCTTCGCGAGGCAAAGCGTGAGGAGCTTGGGCTC
ATCTCCAAGGAACGGCAACGTGAGCTTGACGCTGCCAAGGCTAAAGCTAAAGCTAAATCCAAGGGTGCCAGTGGAGGTGA
TGGTGACCGCGTTCTGATGGGTCCGCCGGGCCTTGACTATATCAGTCTTGGTCTGGTGGATGAGGAGGCTATCCCTAAGT
ATGAGCTGACAGTTGAAGATGGCCTGCGTCTTGCCATAGAATACAGCCATGTGCTAATGCGACGACACCGTGCACGTCAA
ACTGCAGAGTCAACACTCTTGAGGCTCAAGAAGGAGGCCATTGCTGCACTCCCTGAGAAGCTGCGGGCTGCTGCTATGGT
TCCTGACATGACCCCGTTCCCTGCAAACCGGTACATGGCAACACTCACACCACGGATTGAAGGGTATATTGAAAAGGTGC
GAGATGCTGCCAAGAAGTATTCAGTGAAGGAGAAACTTCGCTGA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr5B_1_TraesCS5B01G379000
CCGCGCCGTCGTCGCGCAGCGAGCCTCAACAGCGGCCCCGTCGTCCTCCGCCTCCAGCGCGTCCCGCCGCCCCTGCCGCT
CCG-----------------TCCCCCAGCACCTCTTGCCACCGGAGTTGGCCCTCCAGGTAGCTTCCTCCCTTCACCACT
TCCTTTTGGATTGCCTCCCTTTTGGATTTC-AGTATGTGTGTCCTTGG------------------TAATCTCAGAAATC
GATGCCTCTATCTATGTTGCAAATCTGCGCTGCTCCTGAACTTGGACCAGCGCTTCAGCTTAGATTGATGC------TTG
ACTGCCACTCATTTCGGATGATCAATGACTGACTGACTGACTTCTCATAGTATTAGATTGA-------------------
-TGCTAAGGAATTAATTGATAGAATTCTACGTAGTTCTGTTCATCCGATGCCTATGTGTATG----TGTGT--CCTGGTG
GCGATTGCTGTTTGTTTC-----TTCAGGAAATTGCTAGCTCGTGTGGATGCTGCCATGTAAGGTTAAATGTGTAATGTT
TGTATGTTCTGCACAGTG------------------------TTCATTTGATCAACTGGGCTACATGAT----GTATAAC
ATAGTGACACATTTCTTCTCTTCAGAGTATTAC--------------------------------------------GGT
TGCAGTTTCGGTGGTTGCTGTTT-TTTAAGGAGAAAATGGTTGCTAC---AATTCTAGTTCATGTGATTGCCTAG----G
TGTGTCATAGTAAGGGATGCAACCGGTGGCCCGCATATC----CTGCAAAACTCGTCAATCTTCGTTTAGTACATCATTA
GCTGTAAAATTAAGACTAAGTTTGTGTTTGTGGTATTGTC----------CCCTGCTTGCATCCTTAGTCATAGTGGTGA
TTGCTGTCAGTTTATTCAGGAA--TGC--TAGTTCATCTGATGCTTCCATGTAAGGTTAAATATAT-TGCTTTCTTTGTT
CCGCACGCACAGCATGAAGTTGTTTCTCATTCAAAACGAATTTCATCTGATGAACCGAGCTA-GATGATATGTATAACAC
AGTGACACATTTCTGCTTTGTGCAGCCAAGGTGGTGC----AATGGCTTCAGGCATCATGTTCCGACGCCTTTCCAACAC
ACTCACCATGAGCCCAACAGCAGCACTGGCATCTGGTATGACCAGCCAGCACCACCAGCTTCAGCAGCGTGCACCGGTGA
GCGGCACGTCCAAGGGCAAGGCCAAGCTCAAAGCTGGGATGCCTCTCAGGCGTAGCGTCATAGCGAAGAAGGGGGGGCGC
GCCTGCCACTGCTGGGAGCGGTGGCACTGGCCGTGGTCGCCGTGAAGCCATCGAGCGTATTACTCAGATTGCAGAGTCTT
GTCTGAAGTCCTCTACTCCTCTGCGGCACCTGTCCCCCAAGGAGCGTCTTCGCGAGGCAAAGCGTGAGGAGCTTGGGCTC
ATCTCCAAGGAACGGCAACGTGAGCTTGACGCTGCCAAGGCTAAAGCTAAAGCTAAATCCAAGGGTGCCAGTGGAGGTGA
TGGTGACCGCGTTCTGATGGGTCCGCCGGGCCTTGACTATATCAGTCTTGGTCTGGTGGATGAGGAGGCTATCCCTAAGT
ATGAGCTGACAGTTGAAGATGGCCTGCGTCTTGCCATAGAATACAGCCATGTGCTAATGCGACGACACCGTGCACGTCAA
ACTGCAGAGTCAACACTCTTGAGGCTCAAGAAGGAGGCCATTGCTGCACTCCCTGAGAAGCTGCGGGCTGCTGCTATGGT
TCCTGACATGACCCCGTTCCCTGCAAACCGGTACATGGCAACACTCACACCACGGATTGAAGGGTATATTGAAAAGGTGC
GAGATGCTGCCAAGAAGTATTCAGTGAAGGAGAAACTTCGCTGAG----TTTGATTCAACATGGGAGGAAAGAGTCTTCT
CCATACAAGATGCTGAGAGTTTAGA-CGCTTTCTTATGCTCCTTTAATTAATTCTTGGCCTCTGTCTAGGTTTGATGAGT
--ACCTTGTGCTATTTTGGTCTTAGATAATCAGATTCTGGTAATAAGCCGTCACAATTTTTATTTGCAAGATCCTGCCAT
GTTATTCTAACTGAACTGTTTACGTCAGTTTTACTCCCTCCGTTTCTTTTTACCCCGCATATAAGATTTGTCTGAAGTCA
AACTTTGTAAAGTTTGATGGCTACTTTGTGCTATTTTGGTTTGTGATGATCAGATTCTGGTAATAAGCCGTCACAGTTTT
TCTTTGCAAGACCCTGCCATGTTGTTCTGACTGAGCTTTTCTACTTCAGTTTTGCTGTGTAGTAGTGCATCTTGATATCA
TGTTTGAACTGAAAGCATTAATGTATTTCCCTTGAAATGATGCTTATGCTGAAAGTATGCTGGCAGGGTTACTAGAAAAA
TGGCTTCAGGCCATAATACTTGTTATTGCTTCAGTTCTGGGTTGTTGCATCAGTCTGTTAAGTAATTACCTTGTTTGTTA
AACAGCGGTGAGCATGCCAAATAGGGGCATTTTGGGACATGCTAAATGCAACTGAAAGAACTATGTT-ATCTGTGTGTTG
TTGTGCTTTATTTCTCCTTCCCGTGGCCCCTGTACTTCTGGTTCACTTGAACCCTATTTAACATCCCCACCTCTGAACCC
TTTCTAGAATAGTAATCTGTGTTACAG------CCTC---------------TTGTTTTTGCTGTTCCTTTATCTCCTTT
CATGTTTTCATATGCCCTCAATGATTATTTCCTGTGGGATCTGATTGTCAA---AAGTACCTAGCTTTGCTGTGTCATAT
ACTTA--------TGAGAAAATTGAGATTGTTACTAGAGAAAGATCTAATGC-----CATGTCATGTTTACTTTGTCGAA
CTTCCGAGGGTCAGGTCTC-GGGAG----TTTTGTTATGTGCAAATGGAAGTCA
>chr4A_1
CCGCGCCGTCGTCGCAGAGCGAGCCTCAACGACGGCCCCGTCGTCCTCCGCCTCCAGCGGGTCCCGCCGCCCCTGCTGCT
CCG-----------------TCCCCCGACACCTCTTGCCACCGGAGTTGGCCCTCCAGGTAGCTTCCTCCCTTCACCACT
TCTAGC------GCCTCCCTCTTGGATCTCCAGTATGCATGTCCTTAG------------------TAATCTCAGAAATC
GATGCCTCTATCTATGTTGCAAACCTGGGCTGCTCTTCAACTTGGACCGGCGCTTCAGATTAGATTGATGC------TTG
ACTGCCACTCATTTCGGATGATCAA----TGACTGACTGACTTCTCAGAGTATTAGATTGA-------------------
-TGCTAAGGAATTAATTGATAGAATTCTAG----TTC-----ATCCGATGCCTATGTGTGTGTGTGTGTGT--CCTGGTG
GCGATTGCTGTTTGTTTC-----TTCAGGAAATTGCTAGCCCGTGT-GATGCTGCCATGTAAGGTTAAATGTGTAATGTT
TCCATGTTCTGCACAGTG------------------------TTCATTTGATCAACTGGGCTACATGATGTACGTATAAC
ATAGTGACACATTTCT---CTTCAGAGTATTAC--------------------------------------------AGT
TGCAGTTTCGGTGGTTGCTGTTTTTTTAAGGAGAAATTGGTTGCCAC---AATTCTAGTTCATGTCATTGCCTAGGTGTG
TGTGTCATAGTAAGGGATGCAAGCGGTGGCCCGCATATCCTGCCTGCAAAACTCTTCAATCTTCATTTAGCACATCACTA
GCTGTAAAATTAAGACTAAGTTTGTG------GTATTGTC----------CCCTGCTTGCATCCTTGGTCATAGCGGTTA
TTGCTGTCAGTTTAGTCAGGAG--TGC--TACTTCATATGATGCTTCCATGTAAGGTTAAATATAT-TGCTTTCTTTGTT
CCGCACGCACAGCATGAAGTTGTTTCTCATTCTAAACGAATTTCATCTGATGAACCGAGCTA-GATGATATGTATAACAC
AGTGACACATTTCTGCTTTGTGCAGCCAAGGTGGTGC----AATGGCCTCAGGCATCATGTTCCGACGTCTTTCCAAGAC
ACTCACCATGAGCCCAGCAACAGCACTGGCATCTGGTATGACCAGCCAGCACCACCAGCTTCAGCAGCGTGCACCGGTGA
GTGGCACGTCCAAGGGCAAGGCGAAGCTCAAAGCTGGGATGCCTCTGAGGCGTAGCGTCATAGCCAAGAA-GGGGGGCGC
GCCTGCCACTGCTGGGAGCGGCGGCGCTGGCCGTGGTCGCCGTGAAGCCATGGAGCGTATTACTCAGATTGCAGAGTCTT
GTCTGAAGTCCTCCACTCCTCTACGGCACCTGTCCCCCAAGGAGCGTCTCCGCGAGGCAAAGCGTGAGGAGCTTGGGCTC
ATCTCCAAGGAACGGCAACGTGAGCTTGACGCTGCCAAGGCTAAAGCTAAAGCTAAATCCAAGGGTGCCAGTGGAGGTGA
TGGTGACCGTGTTCTGATGGGTCCGCCGGGCCTTGACTATATCAGTCTTGGTCTGGTGGATGAGGAGACTATCCCTGAGT
ATGAGCTGACAGTTGAAGATGGCCGGCGTCTTGCCAAGGAATACAGCCGTGTGCTAATACGACGACACCGTGCACGTCAA
ACTGCAGAGTCAACGCTCTTGAGGCTCAAGAAGGAGGCCATTGCTGCACTCCCTGAGAAGCTGCGGGCTGCTGCTATGGT
TCCTGACATGACCCCGTTCCCTGCAAACCGGTACATGGCAACACTCACGCCACCGATTGAAGGGTATATTGAAAAGGTGC
GAGATGCTGCCAAGAAGTATTCAGTGAAGGAGAAACTTCGCTGAG----TCCGATTCAACATGGGAGGAAAGAGTCTTCT
CCATACAAGATGCTGAGAGTTTAGA-CGCCTTCTTATGCTCCTTTAATTAATTCTTGGCCTCTGTCTAGGTTTGGTGACT
--ACTTTGTGCTATTTTGGTCTTAGATAATCAGATTCTGGTAATAAGCCGTCACAATTTTTATTTGCAAGATCCTGCCAT
GTTATTCTGTCTGAACTGTTCATGTCAGTTTTAGTCCCTCCGTTTCTTTTTACCCCGCATATAAGATTTGTCTGAAGTCA
AACTTTGTAAAGTTTGATGGCTACTTTGTGTTATTTTGGTTTGTGATGGTCAGATTCTGGTAATAAGCCGTCACAGTTTT
TCTTTGCAAGACCCTTCCATGTTATTCTGACTGAGCTTTTCTACTTCAGTTTTGCTGTGTACTAGTGCATCTTGATATCA
TGTT-GAGCTGAAAGCATTAAAGTGTTTCCCTTGAAATGATGCTTATGCTGAAAGTATGCTGCCAGGGTTAGTAGAAAAA
TGGCTTCAGGCCATAATACTTGTTATTGCTTCGGTTCTGGGTTGTTGCATCAGTCTGTTAAGTAATTACCTTGTTCATTA
AACAGCGGCGAGCATGCCAAATAGGGGCATTTTGAGACATGGTAAATGCAACTGAAAGAACTCTGTT-AACT--------
-------------------------------------------------------------CATCCCCACCTCTGAACCC
TTTCTAGAATAGTAATCTG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr5D_1
CCGCGCCGTCGTCGCGCTGCGAGCCTCGCGGACGGCCCCGTCGTCCTCCGCCTCCAGCGCGCCCCGCCACCCGTGCTCGA
TCCTCCGCCCCCCGGTCACCTCGCCCGGCACCACCCGCCACCAGAGTCGCCCCTCCAGGTATCTTCCTCCCCCCACCACT
TCTAGC------GCCCCCCTTTTGGATTCC-AGTATGCGTGTCTTTAGTAGTTCAACTGTCGAGGTTAATCTGAGAAATC
GATGCCTCTATCTATGCTGCAAATCTGCCCTGCTCTTGAACTTGGACCAGCGCTTCAGATTAGGTTGGTGCTTGGATTTG
AATGCCACGCACGTCGGA----------------GACTGACTGCTCAGAGTATCACGGTTGCGATTTCAGCGTTTGCTGT
TTGCCAAGGAATTGATTGGTAGAATTCTAC----TTC-----ATGCAA-----ATGCCTATA----TGTGT--CATTGTG
GCGATTGCTGTTTGTTTGATTTGTTCAGGAAATTGCCAGTTCATGT-GATGCTGCCATGTAAGGTTAAATGTATACCGTT
TGTATGTTCTGCACAGTATGAAGTTTCTCATTCGAAAAGAGTTTCATTTCATCAACTGGGCTACATCAT----GTATAGC
ATAGTGACACATTTCT---CTTCAGAGTATTACCTAGGAATTGCTGTATGTTAAGGAATTGACCAACTGGGTTACATGGT
TGCCATTTCGGCGGTTGCTGTATGTT-AAGG---AATTGGTTGCTAT---AATTCTAGCTCATGTGATTGCCTAGC----
-----------------------------------------------------------------------------CTA
GCTGTGTCATACTGGT----------------------------------------------------------------
TTGCTGT--------TCAGCAAATTGC--TACTTCATGTGATGCTTCCATGTAGGGTTAAATATATATTGTTTGAATGTT
CCACGCACACAGCAC---GATGTTTCTCATACAAAACGAATCTCATCTGATGAACCGAGCTA-GATGATATGTATAACAC
AGTGACACATTTCTGCTTTGCACAGCCAAGGTGGTGC----AATGGCTTCAGGCATCATGTTCCGACGTCTTTCCAAGGC
ACTCACCATGAGCCCAGCAGCAGCAGTGGCATCTGGTATGACCAGCCAGCACCACCAGCTTCAGCAGCGTGCACCGGTGA
GCGGCACGTCCAAGGGCAAGGCCAAGCTCAAAGCTGGGATGCCTCTGAGGCGTAGCGTCATAGCGAAGAA-GGGGGGCGC
GCCTGCCACTGCTGGGAGCGGCGGCGCTGGCCGTGGTCGCCGTGAAGCCATCGAGCGTATTACTCAGATTGCAGAGTCTT
GTCTGAAGTCCTCCACTCCTCTACGGCACTTGTCCCCCAAGGAGCGTCTCCGCGAGGCAAAGCGTGAGGAGCTTGGGCTC
ATCTCCAAGGAACGGCAACGTGAGCTTGACGCTGCCAAGGCTAAAGCTAAAGCTAAATCCAAGGGTGCCAGTGGAGGTGA
TGGTGACCGTGTTCTGATGGGTCCGCCGGGCCTTGACTATATCAGTCTTGGTCTGGTGGATGAGGAGGCTATCCCTGAGT
ATGAGCTGACAGTTGAAGATGGCCGGCGTCTTGCCAAGGAATACAGCCGTGTGCTAATGCGACGACACCGTGCACGTCAA
ACCGCAGAGTCAACGCTCTTGAGGCTCAAGAAGGAGGCCATTGCTGCGCTCCCAGAGAAGCTGCGGGCTGCTGCTATGGT
TCCTGACATGACCCCGTTCCCTGCAAACAGGTACATGGCAACACTCACGCCACCGATTGAAGGGTATATTGAAAAGGTGC
GAGATGCTGCCAAGAAGTATTCAGTGAAGGAGAAACTTCGTTGAG----TTTGATTCAACATGGGAGGAAAGAGTCTTCT
CCATACAAGATGCCGAGAGTTTAGA-CACTTTCTTATGCTCCTTTAATTAATTCTTGGCCCGTGTCTAGGTTTGATGACT
--ACTTTGTGCTATTTTGCGCTGTGATAATCAGATTCTGGTAATAAGCCGTCACAATTTTTATTTGCAAGATCCTGCCAT
GTTATTCTTACTGAACTGTTTATTTCAGTTTTACTCCCTCCGTTTCTTTTTACTCCGCATATAAGATTTGTCTGAAGTCA
AACTTTGTAAAGTTTGATGGCTACTTTGTGCTATTTTGGTTTGCGATGATCAGATTTTGGTAATAAGCCGTCACGGTTTT
TCTTTGCAAGACCCTGCCATGTTATTCTGACTGAGCTTTTCTACTTCAGTTTTGCTGTGTACTAATGCATCTTGATATCA
TGTT-GAGCTGAAAGCAGGAAAATGTTTCCCTTG-AATGATGCTTATGCTGAAAGTATGCTGCCAGGGTTAGTAGAAAAA
TGGCTTCAGGCCATAATACTTGTTATTGCTTCAGTTCTGGGTTGTTGCATCAGTCTGTTAAGTAATTACCTTGTTCGTTA
AACAGCGGCGAGCATGCCAAATAGTGGCATTTTCAGACATGGTACATGCAACTGAAAGAACTATGTTCAACT--------
-------------------------------------------------------------CATCCCCACCTCTGAACCC
TTTCTTGAAAAGGAATCTGCTGTGATTATACAACCTC---------------TTGTTTTTGCTGTTCCTTTATCTCCTTT
CATGTCTTCATATGCCCTCAATGATGATTTCCTGCGGGATCTGATTGTTGAAAGAAGTACCTAGCTTTGCTGTGTCATGT
ACTTA--------TGAGAAAATTGAGATTGTTACTAGAGAAAGATCTAATGC-----CATGTCATGTTTACTTTGTCGA-
-------GGGTCAGGTCTCAGGGAG----TTTTGTTATGTGCAAATGGAAGTCA
>chr7B_191
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TAATCTCAGAAATT
AATGCCTCTATCTATGTTGCAAATCTGCGCTGCTCCTGAACTTGGATCAGCGCTTTAGATTAGATTGATGC------TTG
ACTGCCACTCATTTCGGATGATCAAC----GACTGACTGACTTCTCGGAGTATAAGATTGA-------------------
-TGCTAAGGAATTAATTGATAGAATTCTAG----TTCTGTTCATCCGATGCCTATGTGTGTGTGCGTGTGTGCCCTGGTG
GCGATTGCTGTTTGTTTC-----TTCAGGAAACTGCTAGCTCATGT-GATGCTGCTATGTAAGGCTAAATGTGTAATGTT
TGTATGTTCTGCACAGTG------------------------TTCATTTGATCAACTGGGCTACATGAT----GTATAAC
ATAGTGACACATTTCT---CTTCAGAGTATTAC--------------------------------------------AGT
TGCAGTTTCGATGGTTGCTGTTTTTT-AAGGAGAAATTGGTTGCTAC---AATTCTAGTTCACGTGATTGCCTAG-----
----------TAAGGGATGCAAGCGGTGGCCCGCA-------------AAACTCTTCAATATTCATTTAGTACATCACTA
GCTGTAAAATT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1B_569
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTAC--------------------------------------------TGC
TGCAATTTTGGTGATTGCTGTTTGTT-AAGG---AATTGGTTGCTAGTAGAATTCTAGTTTGTGTGA-TGCCTGG----A
TGTGTCATAGCAAGGGATGCAAGCGGCGGCCCTCATACCCC----GCAAAACTCCTCAATCTTCATTCACTTCACCTCTA
GCTGTAAAACTAACACTAAGTTTGTGTTTGTGGTATTGTCCGTGAGCCCGCCCTGCTTGCATCCTTAGTCGTAGCGGTGA
TTGCTGTCAGTTTGTTCAGGAA--TGC--TATTTCATACGACGCTTCGATGTAAGGTTAACTATAT-TTTCTTGTATGTT
CCGCACCCACGGCATGAAGATGTTTCTCATTCAAGACGAATTTCATTTGATCAGCCGAGTTA-GATGATATGTATTCCAT
GGTGACGCATTTCTGGTTTGTGCAGCCAAGGTGGTCGGTCAAATGGCTTCAGCCATCATGTTTCGGCGTCTTTCCAAGAC
ACTCGCCATGAGCCCAGCAGCAGCAGTGGCATCTGGTATGACCAGCCAGCATCACCAGCTTCAGCAGCGTGCACCAGTGA
GCGGCACATCCAAGGGCAAGGCAAAGCTCAAAGCTGGGATGCCTCTGAGGCGCAGCGTTATAGCAAAGAA-GGGGGGCGC
GCCTGCCACTGCTGGGAGCGGCGGCGCTGGCCGTGGTCGCCGTGAAGCGATCGAGCGGATTACTCAGATTGCAGAGTCTT
GTCTGAAGTCCTCTACTCCTCTACGACACCTGTCCCCCAAGGAGCGTCTTCGCGAGGCGAAGCGTGAGGAGCTTGGGCTC
ATCCCCAAGGAACGGCAACGTGAGCTTGATATGGCCAAGGCTAAAGCTAAAGCCAAGTCCAAGGGTGCCAGTGGAGGTGA
TGGTGACCGTGTTCTGATGGGTCCACCAGGCCTTGACTATATCAGTCTTGGTCTTGTAGATGAGGAGGCTATCCCTGAGT
ATGAGCTGACAGTCGAAGATGGCCGGCGTCTTGCCAAAGAATACAGCCGTGTGCTAATGCGACGGCACCGTGCACGTCAA
ACGGCAGAGTCGACTCTCTTGAGGCTCAAGAAGGAGGCCATTGCTGCGCTCCCTGAGAAGCTGCGAGCTGCTGCTATGGT
TCCTGACATGACGCCATTCCCTGCAAACCGCTACATGGCAACGCTCACGCCACCCATTGAAGGGTATATTGAAAAGGTGC
GAGACGCTGCCAAGAAGTATTCTGTGAAGGAGAAACTTCGCTGAGTTCATTTGATTCAACAAGGGAGGAAAGAGTCTTCT
CCATATAAGGCGCTGAGAGTTCAGA-TGCTTTCTTATTCTCCATTAATTCTTGGC------CTGTCTAGGTCTGATGACT
--ACTTTGTGCTGTTTTGGCCTGTGATAATCAGATTCTGGTAATAAGACATCGCTT------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TTTT
TTTTTGCAAGACCCTGCCTTGTTATTCTGACTGAACTTTTCTACTTCAGTTTTGCT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr4A_781
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTCACACTGGT----------------------------------------------------------------
TTGCTGTCAGTTTGTTCACCAAATTGCTATACTTCATGTGATGCTTATATGTAGGGTTAAATATAGATTGCTTGAATGTT
CCGCGCACACAGCAT---GAAGTTTCTCATACAAAACGAATTTCATCTGATGAACCGAGCTAAGATGGTATGTACATAAC
AGTGACCCATTTCTGGTTTGTGCAGCCAAGGTGATCC----AATGGCTTCAGGCATCATGCTCCGACGTCTTTCCAAGAC
ACTCACCATGAGCCCAGCAGCAGCACTGGCATCTGGTATGACCAGCCAGCATCACCAGCTTCAGCAGCGCGCACCGGTCA
GCGGCACGTCCAAGGGCAAGGCCAAGCTCAAAGCCGGGATGCCTCTGAGGCGTAGCGTCATAGCGAAGAA-GGGGGGCGC
GCCTGCCACTGCTGGGAGCGGCGGCGCTGGCCGTGGTCGCCGTGAAGCCATCGAGCGTATTACTCAGATTGCAGAGTCAT
GTCTCAAGTCCTCCACTCCTCTACGGCACCTGTCCCCCAAGGAGCGTCTCCGCGAGGCAAAGCGTGAGGAGCTTGGGCTC
ATCTCCAAGGAACGGCAACGTGAGCTTGACGCTGCCAAGGCTAAAGCTAAAGCTAAATCCAAGGGTGCCAGTGGAGGTGA
TGGTGACCGCGTTCTGATGGGTCCGCCGGGCCTTGACTATATCAGTCTTGGTCTGGTGGATGAGGAGGCTATCCCTGAGT
ATGAGCTGACAGTTGAAGATGGCCGGCGTCTTGCCAAAGAATACAGCCGTGTGCTAATGCGACGACACCGTGCACGTCAA
ACTGCAGAGTCAACGCTCTTGAGGCTCAAGAAGGAGGCCATTGCTGCGCTCCCTGAGAAGCTGCGGGCTGCTGCTATGGT
TCCTGACATGACCCCGTTCCCTGCAAACAGGTACATGGCAACACTCACGCCACCTATTGAAGGGTATATTGAAAAGGTGC
GAGATGCTGCCAAGAAGTATTCAGTGAAGGAGAAACTTCGTTGAGTTC----GATTCAACATGGGAGGAAAGACTCTTCT
CCATACAAGATGCTGAGAGTTTAGAACGCTTTCTTATGCTCCTTTAATTAATTCTTGGCCTCTGTCTAGGTTTGATAACT
ACACTTTGTGCTATTTTGGGCTGTGATAATCAGATTCTGGTAATAAGCTGTCACAAATTTTATTTGCAAGATCCTGCCAT
AATATTCTCACTGAACTGTTTACTTCAGTTTTGCTCCCTCTGTTTCTTTTTACTCCGCATATACGATTTGTCTGAAGTCA
A-CTTTGTGAAGTTTGATGGCTACTTTG-GCTATTTTGGTTTGTGATAATCAGATTCTGGTAATAAGC------------
---TTGCAAGACCCTGCCATGTTATTCTGACTGAGCTTTTCTACTTCAGTTTTGCTGTGTACTAGTGCATCTTGTTATCA
TGTA-GAGCTGAAAGCAGGAAAGTATTTCCCTTGAAATGATGCTCATGCTGAAAGTATG---------------------
-----------------------------------------------------TCTGTTAAGCAATCACCTTGTTCATTA
AACAGCGGCAAGCATGCCAAGTAGGGGCATTTTGAGGCACGGTACATGCAACTGAAAGAACTATGTT-AACT--------
-------------------------------------------------------------CATCCCCACCTCTGAACCC
TTTATAGAATAGTAATCTGCTGTG---ATACAACCTCTTTTCTTTTTCTTTTTTCTTTTTGCTGTTCATTTATCTCCTTT
CATGCTTTCATATGCCCTCAATGATGATTTCCTGCAGGATCTGATTGTCGAAAGAAGTACCTAGCTTTGCTGTGTCATGT
ACTAATGTACTTGTGAGAAAAATCAGATTGTTACCAGAGAAAGATCTAATGCCATGTCATGTCATGTTTACTTTGTCGAA
CTTCCGAGGGTCAGGTCTTGGGAGTGTGCTTTTGTTATGTGCAAATGGAAGTCA
>chr1D_998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATCATGCTCCGACACCTTTCCAAAAC
ACTTGCTGTAAGCC------CAGCAGTGGCATCTGGTATGACCAGCCAGCATCACCAGCTTCAACAGCGTGCACCAGTGG
GTGGCACATCCAAAGGCAAGGCTAAGCTCAAAGCCGGCCTGCCTTTGAAGCGCAGCGTCATAGCAAAGAA-GGGGGGCGC
GCCTGCCACTGCTGGGAGCGGTGGTGCTGGCCGTGGTCGTCGTGAAGCCATTGAGCGCATTACTCAGATTGCAGAGTCTT
GTCTGAAGTCCTCTACTCCTCTACGGCACTTGTCCCCCAAGGAGTGTCTTCGCGAGGCAAAACGTGAGGAGCTTGGACTC
ATCTCCAAGGAACGACAACGTGAACTTGATATTGCCAAGGCTAAAGC------CAAGTCCAAAGGTACCATTGGAGGTGA
TGGTGGCCGTGTTCTGATGGGTCCACCTGGCCTTGACTATATCAGTCTTGGCCTTGTAGATGAGAAGACCATCCCTACTT
ATGAGCTGACAGTTGAGGATGGTCGGCGTCTTGCCAAAGAATACAGCCGTGTGCTAATGCAACGACACCGTGCACGCCAA
ACTGCGGAATCAACACTTTTGAGCCTCAAGAAGGAGGCCGTTGCTGCACTCCCCGAGAAGCTGCAAGCTGCTGCTATGGT
TCCTGACATGACACCATTCCCTGCAAACCGGTACATGGCAACACTCACGCCACCAATTGAAGGGTATATTGAAAAGGTGC
GAGATGCTGCCAAGAAGTATTCTGTGAAAGAGAAGCTTCGCTGAGTTC----AATTCAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>SNPs
------------------------------SS--------------------------------------------S---
--------------------------S-----------------------------------------------------
--SSSSSSSSSS-------------------------S--------S---------------------------------
----------------------------------------------------------S---------------------
-------------------------SSSS------------------S--------------------------------
------------------------------SSSS----------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
----------------SSS-------------------------------------------------------------
------------------------------------S-------------------------------------------
----------------------S-------------------------------S---------S------------S--
--------------------------------------------------------------------------S-----
-------------------------------S-----S------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
----------------S---------------------------------------------------------------
----------------------------------------------S-----------------------S---------
-------------------------S------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-----------S-----------S-------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S----S--------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----S---------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-------------------------------------S------------------
----S--S-------------S----------------------------------------S--------S--------
---------------------------------------------------------------------------S----
--------S-------------------------S------S---------------------------S--SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
-------------------SSS-SSSS-----------------------------------------------------
-------------------------S--------S--------------S----------------------------S-
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_164
--------------------------------------------------------------------------------
----------------------------------------------------------------TCCTCCCTTCACCACT
TCCT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_1198
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CAC
ACTCACCATGAGCCCAA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_165
--------------------------------------------------------------------------------
-----------------------------------------------------------------CCTCCCTTCACCACT
TCCTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_1729
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATGTGCTAATGCGACGACAC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_1327
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TCAAAGCTGGGATGCCTCTC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_2665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GGCCCCTGTACTTCTGGTTC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
