>input_sequence_68850
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------------------------------------------------------ATGGAGCGGCAGCCTCGGCCGCAGCT
GGCCGT---GGCGGAGGAGGCCATCGCGCTCTACGACACCTACTGGTACCGCCGCCTCGTGCTCAACGCCTACTCCCCTC
CCGCGCCTCCC------CCGCCGGCGCCTGAGCGCGAGCAGCCGGAGCAGGCGCCGGCGGAGGAGAGCAAGAGCCAGCTG
CAGCGGGCTCCGTCCGGGCTGCAGCGGCACCGCCGGACGCGGAGCGACGAGGCCAAGGCCGCCGCGTTCCACGGCCAGCT
GGAGCCGCTCAAGATCCCCACCAGCCACCGCGCGAGGCTCGAGACCATCCTGTCCGGAAAGGACGGCCTGGCCGCGCCGG
AGCCGCTACCGGAGCGCCGGAGGCCGGAGGCGCGGCGGCCCGGCGGGAGGAGGCGGAGGAGCCGCCGCGGGCGGAGCCTG
TCGGAGCTGGAGTTCGAGGAGGTGAAGGGCCTGCAGGACCTCGGCTTCACCTTCTCCGAGACCGAGGTCGACGCCGAGCT
CGCGTCCATCGTGCCGGGGCTCAGGCGGCTGCGCGCGGAGGAAGAAGCCAGAAGAGCCAAGGCGGCGGAGGCGGCAGCCT
GCGCCGAGGAGGAAGCCTGTAGGAGCAGGGCCGCTGCGGAGGCCTCCGACGCGGCGCCGAGGAGGCCGTACTTGTCCGAG
GCGTGGGAGGACGAGGAGGCGGAGGTGAGGCGGATGCTGAGCAACTTCAGGATCCCGGCCGCCGCCGACGGCGCTGACCT
CAAGGAGAACCTCCGGCTCTGGGCGCACACCGTGGCCTCCGCCGTCCGGTGA----------------------------
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>chr7B_1_TraesCS7B01G273400
TACTCAATGCGGAGCTGGGGCCTGTCTCGTACCGTGCGATGACAGGGAACATGGACGAGTCAGCAGGAAAGCAACCCCTC
TTCTGCCTGGTGGTCCTCGACCAAGTCACCTCAGTATCTGCTAAACGACATGGATGGCTTGGCCTCGAGCTCGCGTCTCA
TCCATTTTTAGTTGGCGGTTTGATTCACCTGTGGATCCGTCGTAAAAATGCCACAAATGCACCATAATCGGTCGTGTTCT
CTATTGTTAGGGAGTGTCTTCAGAAAGCCTGATGTAATGTGTCCTCTTTTACGAGGGCGGGTGGGCAATCTCAAAAACAA
GGATTTTTTTTGTAGTAATACGTGTCTCATTAATAAAATAAAGATTCACTCACAAGCCATGTAAACATCAACATTACAAA
ACTGAAAAGATAGGATAACCTTATGAAAAAACAACGTATGTCCCTCTCCACTAAGGAAAAGAAGACAGATCACCTTTTCA
CCCAAAGCTTGAGGCGGCTCCATCGCTGATCAGCAGCTTTACGGAATTTCAAAGTAGTTTGCCTGAAGCAAAATCGTTGC
CATTGAAAGAATTAGACCGGGGCAATGTGTTCCCAAACACGTCATCGAACTTTAGAACTGACACCCAGATAGCAACTGCA
CCGAATGATACGTAGGA---GTACGCCAGCACCACCGTATGAAATACCGCGGAGAATTTCCGACCAGACGACACGGCCAC
AGATATCAGCTGAGATCGTCAGCACATGCTCGTACA-----AAATACGTGACGGCCAAGTAGCCTCAGAAACTTCAACGC
CCGCACGTTGCCCGCGTGTCGTGTTACTACCGTGTAATTGCACTTGCACACCACCCGGACCGGTCGACCGACGCGCTCTG
CTGTGCTAGACC-----GGGCTGCGTTTTGCATAT-AAAACCTCGCCCGCCGCCGCTCCCAACGCCCACCGCAGCCAGTC
CCGTCGCGAAACCCAACGCGCGCGCACGCACGCTCCCTCTCTCTCTCCCCCCGAATGGAGCGGCAGCCTCGGCCGCAGCT
GGCCGT---GGCGGAGGAGGCCATCGCGCTCTACGACACCTACTGGTACCGCCGCCTCGTGCTCAACGCCTACTCCCCTC
CCGCGCCTCCC------CCGCCGGCGCCTGAGCGCGAGCAGCCGGAGCAGGCGCCGGCGGAGGAGAGCAAGAGCCAGCTG
CAGCGGGCTCCGTCCGGGCTGCAGCGGCACCGCCGGACGCGGAGCGACGAGGCCAAGGCCGCCGCGTTCCACGGCCAGCT
GGAGCCGCTCAAGATCCCCACCAGCCACCGCGCGAGGCTCGAGACCATCCTGTCCGGAAAGGACGGCCTGGCCGCGCCGG
AGCCGCTACCGGAGCGCCGGAGGCCGGAGGCGCGGCGGCCCGGCGGGAGGAGGCGGAGGAGCCGCCGCGGGCGGAGCCTG
TCGGAGCTGGAGTTCGAGGAGGTGAAGGGCCTGCAGGACCTCGGCTTCACCTTCTCCGAGACCGAGGTCGACGCCGAGCT
CGCGTCCATCGTGCCGGGGCTCAGGCGGCTGCGCGCGGAGGAAGAAGCCAGAAGAGCCAAGGCGGCGGAGGCGGCAGCCT
GCGCCGAGGAGGAAGCCTGTAGGAGCAGGGCCGCTGCGGAGGCCTCCGACGCGGCGCCGAGGAGGCCGTACTTGTCCGAG
GCGTGGGAGGACGAGGAGGCGGAGGTGAGGCGGATGCTGAGCAACTTCAGGATCCCGGCCGCCGCCGACGGCGCTGACCT
CAAGGAGAACCTCCGGCTCTGGGCGCACACCGTGGCCTCCGCCGTCCGGTGAC-TGCTTTGACCAAGA--------GTCC
ACC-TTTTTTCCCTTTTGCCGTGCAGTGGGTGGAATGATGAACTGTAAATATTTTTTGCCATGTGCATGCGCATCTTTTC
AAGTTATTTTAGCAGCAGCTTGCGTTAGTTTAGTCACGACAATGTAAAATGTATTCGAAGTTCAAATTCACGAACATGTA
ACTGAATACAGGCTCTTGCAAGCAACAAA-AGGAAATGTGAACGAGGGGGCGCAGAAATTTTTGATCCGATTGACAGGCT
GATCTGATATCATTGTTTCGGTGTCAGTGGCAAGAAAGCATTTCCGGTTGCTTTGAAGCTAAGAATTCTTGCATAATTCC
TTGTCAACTTTTATCATCT-TGACATGACGTGACTGGGACGAACAATCC-AGAGCTGGGTGCCGTTGATTTGTGGAAACC
AGGCAGCAGCGCCGGGACAGCAAGGCCACTGGCCACCAGCTGCGTTGATCTGAGAAAAGAGGAAATAAAATGATTCCATG
TTGCCTCCCATGGTTTTACGCTTTTCAGATCCGCCACAAGGCTCTCGCTCCATGGATTCCTATTTTGGGAACTTCCATGC
AGGTTAATCACGTGACGACGTG----------------------------------------------------------
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-------------------------------------------------------CCATCGATGGTATCATTGGCTTTGT
TAATCTGTTGCTGAGTCCGTAGCACATTTTCCATGAGCGCTAAAGTATTCAGGAGATTAGGACACGTGAACTGTGCGATG
CACGCAACGGGTAGTTAATTCTCTG-TTGC--------GGCCGCCTATTTGACGCGGTCTCACCAGATGGTACAGGCGTT
AGAATTTTTTTTCAGCTATCAGTCACCTTCTTCGAGTAGCCCCAAGGGTGAGACGGGGGTGCCACGGCGAGGTTGGCTAT
GGATGAGATGACAACGACATCAACAGGGAAGGAGAGTTTGGGATTGACGGCGTGTGGAAGGGGGAGGCGGGCATGGAAGG
GCAAGGCCGGTGTGTTAACGTGACTAGCGTCGCCGGCCATTAGCCCCAGGTGGCGGTGCCAGGCAAT
>chr7D_1
TACTCAATGTGGAGCTGGGGCCTGTCTCGTACCGTGCGATCACAGGGAACATGGACGAGTCAGCAGGAAAGCAACCCCTC
TTCTGCCTGGTGGTCCTCGACCAAGTCACCTCAATATCTGCTAAACGACATGGATGGCTTGGTTTCGAGCTCGCGTCTCA
TCCATTTTTAGCTGCCGCTTCGCTTCACCTGTGGATCCGTCGTAAAAATGCCACAAATGCACCATAATCGGCCGTGTTCT
CTATTGTTAGGGAGTGTCTTCAGAAAGCCTGATGTAATGTGTCCTCTTTTACATGGAAGGGAAATTGTGT----------
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------------------------------------------------------------------AGATAGCAACTGCA
TCGCCTGCACAGAATGACACGTACGCCGGCACCAGCGTACGAAATACCGCAGAGAATTTCCGACCAGGCGACACGGCCAC
AGGCATCAGCCGAGATCGTCAGCACATGCTCGTACA-----ATATACGTGACGGCCAAGTAGTCTCAGAAACTTCTACGC
CCGCACGTTGCCCGCGTGC---------ACCGTGTAATTGCACACCA-------CCGGACCGGCCGACCGACGCGCTCGG
CTCTGCTAGACTAGACGGGGCTGCGTTTTGCATATAAAAACCTCGCCTGCCGCCGCTCCCAACGCCCACCGCAGCCAGTC
CCGTCGCGGAACCCAACGCGCGCGCACC------------CTCTCTCCCCCCGAATGGAGCGGCAGCCTCGGCCGCAGCT
GGCCGT---GGCGGAGGAGGCCATCGCGCTCTACGACACCTACTGGTTCCACCGCCTCGTCCTCAACGCCTACTCCCCTC
CCGCGCCCCAGCCGCCGCCGCCGGCGCCTGAGCGCGAGCAGCCGGAGCAGGCGCCGGCGGAGGAGAGCAAGAGCGAGCTG
CGGCGGGCCCCGTCCGGGCTGCAGCGGCACCGCAGGACGCGGAGCGACGAGGCCAAGGCCGCCGCGTTCCACGGCCAGCT
GGAGCCGCTCAAGATCCCCAACGGCCACCGCGCGAGGCTCGAGACCATCCTGTCCGGGAAGGACGGCCTGGCCGCGCCGG
AGCCGCTGCCCGAGCGCCGGAGGCCGGAGGCGCGGCGGCCCGGCGGGAGGAGGCGGAGGAGCCGCCGCGGGCGGAGCCTG
TCGGAGCTGGAGTTCGAGGAGGTCAAGGGCCTGCAGGACCTCGGCTTCACCTTCTCCGAGACCGACGTCGACGCCGAGCT
CGCGTCCATCGTGCCGGGGCTCAGGCGGCTGCGCGCGGAGGAAGAAGCCAGAAGAGCCAAGGCGGCGGAGGCGGCGGCCT
GCGCCGAGGAGGAAGCCTGTAGGAACAGGGCCGCCGCGGAGGCCTCCGACGCGGCGCCGAGGAGGCCGTACTTGTCGGAG
GCGTGGGAGGACGAGGAGACGGAGGTGAGGCGGGTGCTGAGCAACTTCAGGATCCCGGCCGCCGCCGACGGCGCTGACCT
CAAGGAGAACCTCCGGCTCTGGGCGCACACCGTGGCCTCCGCCGTCCGGTGAC-TGCTTTGACCAAGA--------GCCC
ACCTTTTTTTCCCTTATGCCGTGCAGTGGGTGGAATGATGAACTGTAAATATTTTTTGCCATGTGCATGCGCATCTTTTC
AAGATATTCTAGCAGCAGCCTGCGTTAGTTTAGTCACGACAGTGTAAAATGTATTCAACGTTCAAATTCACGAACATGTA
ACTGAATATAGGCTCTTGCAAGCAACAAAGAGGAAATGTGAAAATA---------------TTGAACCGGTTGACAGGCT
GATCTGATATCATTGTTTGCGCGTCAGTGCCAAGAAAGCATTTCCGGTTGCTTTGAAGCTAAGAATTCTTGCATAATTCC
CTGTGAGCTTTTATCATGT-TGACATGACGTGATTGGGACGAACAATCT-AGAGCTGGGTGCCGTTGATTTGTGGAAACC
GAGG----------------------------------------------------------------------------
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>chr7A_722
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----ATCAACTGAGATCATGAGCACATACTCGTACAGTACAAAATACGTGACGGCCAAGCAGTCTCAGAAACTTCTACGC
CCGCGTGCAGCGT--------------TACCGTGTGATAGCAAAGCAACACCACCCGACA----CGCCCGACGCGCTAGG
CTGGGCCAGTCGCTAGACCGCGCTCCGCTGTATAT-AAAACCTCGCCCGCCGCCGCGCCAACGCCACCACAACCA-ACCC
CCGCCGCGAGACCCAGCGCGCGC---CC------------CTCTCTCCCCCCAAATGGAGCGGCAGCCTCGGCCGCACCT
AGCCGTGGCGGCGGAGGAGGCCATCGCGCTCTACGACGCCTGCTGGTTCCACCGCCTCGTGCTCAGCTCCTACTCCCCTC
CCGCGCCTCTGACGCCGGCGCCGGCGCCTGAGCGGGAGCAGCCGGAGCAGCCGCCGGCGGAGGAGAGCAAGAGCGAGCTG
CAGCGGGCCCCGTCGGGGCTGCAGCGGCACCGCCGGACGCGGAGCGACGAGGCCAAGGCCGCCGCGTTCCACGGCCAGCT
GGAGCCGCTCAAGATCCCCAACGGCCACCGCGCGAGGCTCGAGACCATCCTGTCCGGGAAGGACGGCCTGGCGGCGCCGG
AGCCGCTGCCGGAGCGCCGGAGGCCGGAGGCGCGGCGGCCCGGCGGGAGGAGGCGCAGGAGCCGCCGCGGGCGGAGCCTG
TCGGAGCTGGAGTTCGAGGAGGTCAAGGGCCTGCAGGACCTCGGCTTCACCTTCTCCGAGACCGACGTCGACGCCGAGCT
CGCGTCCATCGTGCCGGGGCTCCGGCGGCTGCGGGCGGACGAAGAGGCCAGAAGAGCCAAGGCGGCGGCGGCGGAGGCGG
AGGCGGAGGAGGAAGCCTGCAGAAACAGGGCGGCCGCGGCGGCCTCCGACGCGGCGCCGAGGAGGCCCTACTTGTCCGAG
GCGTGGGAGGACGAGGAGGCGGAGGTGAGGAGGGTGCTGAGCAACTTCAGGATCCCAGCCGCCGCCGACGGGGCCGACCT
CAAGGAGAACCTCCGCCTCTGGGCGCACACCGTGGCCTCCGCCGTCCGGTGATTTGCCTTGACCAAGATGGAGGCAGCCC
AACTTTTTCC------TGCCGTGCCGTGGGTGGAATGATGAACTGTAAATATTTTTTGCCATGTGCATGCGCATCTTTTC
AAGTTATTTTAGCAGCAGCTTGCGTTAGTTTAGTCACGAGAATGTAAAATGTATTCACAACTCAGGTTCACGGCCATGCC
TC-------------------------AAAATGAAATGTGAAAATG---------------TCGATCCGAT---------
----TGATATCATTGTTTCCGTGTCAGTGCCAAGAAAGCATTTCCGGTTGCTTTGAAGCCAAGAATTCTCCCATAATTCG
CTGTGAACTTTTATCATGTGTGACGTGACGTGATCGGGAGGAACAATCTAAGAGCCGGGTGCCGTTGATTTGTGGAAACA
AGGTAGCGGAG----------AAGGCCACTGGCCACCAGCTGCGTTGGTCCGAACGAAGGG------AAATGATTCCATG
TTGCCTGCCAT-------------------CCGCCACAAGGCTCTCGTTCCGTGAGTTTCC-TTTTGGGAACCTCCATGC
AGGTTAATCACGTGACGACGTGCGAC------------------------------------------------------
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-----------------------------------------------------------CGATGGAATGGTTGGGTTTGT
TTATTTGTTGCTGAGTGATTAGCACATTTTCCATGAGCGCTAAAGTATTCAGGAGATTAGG-CACGTGAACTGTAAGATG
CACGCAACGGATAGT-AATTCGCTGTTTGCTTGTAGGTGGCCGCCTATTTGACTCGCTCTCACCAGATGGTACAGGCGT-
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>chr7D_2136
TTC-----------------------------------------------------------------------------
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------------ATCATGT-TGACATGACGTGATTGGGACGAACAATCT-AGAGCTGGGTGTCGTTGATTTGTGGAAACC
AGGCAGCAGCGCCGGGACAGCA-GGCCACTGGCCACCAGCTGCGTTGATATGAGAAAAGAGGAAATAAAATGATTCCATG
TTGCCTCCCATGGTTTTGCACTTTTCACATCCGCCGCAAGACTCCCGCTCCATGGATTCCTTTTTTGGGAACTTCCATGC
AGGTTAATCACGTGACGACGTGCGACCAATTTTAGTGTTTTGACCCTTTGTCCAAAGTTTAACCGGATCTGACCCTGATT
CGAAATTATTTCGAGATCTGACTTTTTTTCTACCCGGAATGGATGGCGGTAGGGTATAACTGCTTATCGCCAGAGTCTCT
GGCGGTAGAACTTAACTATGCCGTCACATCCATTTGACATAAAAAATACCCTACCGTCGAAGCTTTTGGTGGTAGGCGTG
CAACCCTACCGCGCTTGGCGGTAGGCTGGGCGACATGCATCAAAGCAATCTTTGCTGGTAGTAGCGCTACATCTATACCT
GCGTCTGCGGAGCACTGTGCGTCTGTGTTTAGCTGCGGCATGCCTGTACTGTGCGTCTGTGTTTAGCTGCTGCTGCCACT
GTGTGCGTCTGTGCGTCTGGTAGTCCATTCATTCGGCCATCCATTCGGCCATCCATTCAACTACTGCTGCCACTGTCATG
CATCAATGCTACTAGTACTAGCCTCCTGGTCATGCATGCATAGATGAGTGTGTACTGTGCATGCATGAATCAATGCTACT
AGTACTAGTCTCTTGGTCACAAGGTCACGCGAGATTCCTACCGTCACGCTATTTGCGGGTAAGGTTGCACACCTTACCGT
CAAAGACCCTGGCGGTAGGGTATTTCTCACGTTAAATAAGCGTAACGGCACAGTTAAGTGCTACTGCCAAAGCTTGTGGC
GGTAGGCAGTTATACCCTACCGCCAGACAATATGGCGATAGAAAAAAGATCAAATCCCGAAATACTTTCGAATCAGGGTC
CGATCCAGTTAAACTTTGCGAAAGGGTCAAAAACACGAAAATTGGCCACGACGTGCCATCGATGGTATCATTGGCTTT--
----TTGTTGCTGAGTCGGTAGCACATTTTCCATGAGCGCTAAAGTATTCACGAGATTAGGACACGTGAACTGTGCGATG
CATGCACCAGAAAGT-AATTCTCTG-TTGCTTGTAGGTGGCTGCCTATTC-ACGTGGCCTCACCAGTTGGTATAGGCGTG
AGTATTTTTTT---------------------------------------------------------------------
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>SNPs
---------S------------------------------S---------------------------------------
---------------------------------S----------------------------SS----------------
-----------S--S--S--S-S------------------------------------------------S--------
----------------------------------------------------SS--SS---SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
S--SS--SSSS-S-S------------S------S----S----------S----------------S------------
--SS----------------------------------------------------------S------------S----
------------------SSSSSSSSS----------------SSSS----------------S--------------S-
-----------S--------------------------------------------------------------------
---------------------------SSSSSSSSSSSSS----------------------------------------
-----------------------------------------------S--S-----------------------------
---------SS---------------------------------------------------------------S-----
--------S-----------------------------------------------------------------------
--------------------S-S----------------------------------S----------------------
-------S------------------------------------------------------------------------
-----------------------S-----------------------------------------S--------------
---------------------------------------------------------------------------S----
------------------------S---------S---------------------------------------------
---------------------------------S----------------------------------------------
-----------------------------------------------------------------------------S--
---------------S----------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------S---------------------------------SSS-SSSSSSSSSSSSSSS-------------------
-------------------S---------S--------------------------------------------------
S---S------------S---------------S--------------S-------------------------------
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-----------------S-S-------S---------------------------------S------------------
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-S--S------------S--------------------------------------------------------------
----------S----S---------------------------------------------------------------S
--S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_598
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------------------GGGGCAATGTGTTCCCAAAC------------------------------------------
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>reverse_3285
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----CTGTTGCTGAGTCCGTAGCA--------------------------------------------------------
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