>input_sequence_68834
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-----------------------------------------------------ATGGCAGATGCCGCAAGAGGAGCAACA
GGGCCGCCTCCCCACGGCAGCCTCAGCCTCCCGGACGAGATCACCATCTGGGAGATCCTCGTCCACCTGCCTCCCAAATC
GCTTCTCCGCTGCCGTGCCGTCTGCCGCGCCTGGTGCGGCGCCACCTCCACCCGCCGCTTCTTCCTCGCCCACCACGCCC
TCCAGCCCACCCTCCCCCTCCTCTACGACTACAACTTCGTCGGCGACGAGGTCGAGTCCCTGGACATCATCCCCTTCGAC
CACGCC---------------------------CTCCAG------CCCGTCGCGCGGCTTCAACAAGCCTCCGACTTTCA
CCATCTGGAGGCCTGCTGTGACGGCCTCCTCGTCCTCTCCTTCCGCAACA------------ACTGGCGCTTCGCCATCT
GCAACCCTGCTACTCGTCAGTACGCTCCCCTCCCGCTGGCCTATGGCCGTAATGGCGAGTACTCGCTCCTGGGGATCTAC
CCGCACAGCCCCACCGGCGACTACCGGCTACTGATGTACCGGTACTCACCATTGATGCATGATGAACTGGT---------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------TGCAGAGCTCACTGTGCGGTTCGGAAGGTTTGACGAAAGTTCTTGGGTAGTG
GCCGTGCCTTGGGATGGTGACGTGCTCCTACTGGTCAATTTTGGTGACTGGCTACTTCAGGTTGACATTGAGGGCAAGCT
GGTCGCTACTTTCCATCGCAGAGGCCTCGGTCCTGCAAATCTTCGGCTCAAGCAAACTCTTGTTCAACATACCTTCTTTC
CGACACTGGAGGGCTATGTTGCAAACTCTCCGCCTTTCATCTGA------------------------------------
--------------------------------------------------------------------------------
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----------------------
>chr3B_1_TraesCS3B01G534100
CGATTTCCGGATAATACAGTTATAGCATGAATAAAAGACAATTATCATGAACAAGGAAATATAATAATAATACTTTTATT
ATTGCCTCTAGGGCATATTTCCAACAGGATCAAGCAAGCCGGGCTAAATGTTCATCGCTTATAACTAACCAGAAAAGTAT
CCCTTATCACAGAATAAACAACTATAACTCACTTGCACAGCTAT-GTAGAACTAGAAATCGAAATAGATGA---------
---------ACATGACCAAAATTACAAATAGTAGTACAAGACAATATTATTCAGACTGAGTTGACCATGAGGTTTTAGAT
TCT--------AATTGGTTGGTTTCAGATTCTGCAGCAAACCATGGCGAT------------------------------
-----------------------------------------------------------------------GCTCGTGTC
TCCAATGCGCGGGCCGCCGCATCGCGAGAAGCAAATCGGCGTGGGGAGAAAACCACCACACATTTTTTCAAGGAAACCAC
ACACTGATAAAATCTAAGTTCAGAACACAAGATGAACGGTTGACTTGAATTCATCCAAGTTCAGAAGAGGGATACATATA
G-----------------------------------------------CTCTGCGCTTGTAGCAGCTGCAG---------
---------------------------------------------GCTAATCTAACTCAAGGCCACAAG-----------
-------------------CTAATCTAACAGTACAACATGTCACCGACAAGCATAGATTTCAGATGACGACCTAATCTAA
GTACAGCATCTCACTTATCCTTCAACTTTTACA--------ATTCAAATGAATAACATTCACCTTGCTCTTGCTCTGGAT
TTCAATTGA-------------TGCCCTTCAATGAGGGGATGCCCGAGGACGACTGAACGAGCTCCGAGAGGCCGACCGT
GTAGTGGCGGCGCCGGCCGCCGGCGCTCCGCCCGGCCGCGCCGTTCGGGGTAGGGTTCAGAGCTGAAGGGCTGGCGCTGC
GC-----------------------------------------AG--------TGTCTGGGCCAGTTGAAGGCCTCAAAG
GAGGAGGCAACCC---------------AGGCCCAGTTCAAAGGCATTTCTTCTGCCTGTTTC-----------------
---------------CATGAGAGAGCAGAGCAAAACCTACCTCCGCTCCCCT---CCCCTCAA-CGCCGCCGTCACT---
------------------------------CCTCTTGCTTGTCGCCGGCGACCATGGCAGATGCCGCAAGAGGAGCAACA
GGGCCGCCTCCCCACGGCAGCCTCAGCCTCCCGGACGAGATCACCATCTGGGAGATCCTCGTCCACCTGCCTCCCAAATC
GCTTCTCCGCTGCCGTGCCGTCTGCCGCGCCTGGTGCGGCGCCACCTCCACCCGCCGCTTCTTCCTCGCCCACCACGCCC
TCCAGCCCACCCTCCCCCTCCTCTACGACTACAACTTCGTCGGCGACGAGGTCGAGTCCCTGGACATCATCCCCTTCGAC
CACGCC---------------------------CTCCAG------CCCGTCGCGCGGCTTCAACAAGCCTCCGACTTTCA
CCATCTGGAGGCCTGCTGTGACGGCCTCCTCGTCCTCTCCTTCCGCAACA------------ACTGGCGCTTCGCCATCT
GCAACCCTGCTACTCGTCAGTACGCTCCCCTCCCGCTGGCCTATGGCCGTAATGGCGAGTACTCGCTCCTGGGGATCTAC
CCGCACAGCCCCACCGGCGACTACCGGCTACTGATGTACCGGTACTCACCATTGATGCATGATGAACTGGT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TGCAGAGCTCACTGTGCGGTTCGGAAGGTTTGACGAAAGTTCTTGGGTAGTG
GCCGTGCCTTGGGATGGTGACGTGCTCCTACTGGTCAATTTTGGTGACTGGCTACTTCAGGTTGACATTGAGGGCAAGCT
GGTCGCTACTTTCCATCGCAGAGGCCTCGGTCCTGCAAATCTTCGGCTCAAGCAAACTCTTGTTCAACATACCTTCTTTC
CGACACTGGAGGGCTATGTTGCAAACTCTCCGCCTTTCATCTGACAGATGTCATGTCAGGTGCTGATTCTATCTA----G
CCCAACTGTCAGTATCCTCATGAGTTGCCGTGTGTATGAATTCAGCCCACTATGAACCAGCTAGTTTCA-TTTGATGCAT
AGACAAGTTATGATCAAGAAGCTTGACTGTTTCATGGTTAT---------------------------------------
------GTTTATATTTCTCTGAATATTCTTCTGTGCTGAAGTGGCTGCCATGAGTCTTGATGCTAAAACTGCAAGTCTCT
GTTTAC---------------------------------TTAACTGAAGAATTAACTTCTCCCTTTATCAAGGTCTTCTT
TTTATAGATTACTAGTGCTCTTCTTAATACTA--------GCAAATGTACATTTTATTTCTGTTTCTATGTTTTGTTTTA
GCTGACAATGAAATGAGGCAAATTATCTTGTTTT-AATTATA--GTCAATTTTTCAGTGAAATGTTCTGTTGCAGTTCAT
TT-TTATTCATGATTCCATTGCATCTGGTTAAAGTATTGAGATATACTGTTTCAATTCTGCCTTCATGTTGTATCATTAT
TCATTTGGAGTTATATTTATCACTTCACTCTGTCTGTAACCATTTTAAGGAATCAATGATTCATGTGATGTTTGATATTA
ACATAAGCTCGAGAAATGGAACCTTTATTT---GTAAGTAGTAGAAAGGTTATCATCAGTGGCGGAGCTATGTTGTAAGC
TACAGGGGCCATGCCCCCCCAGCTTTTGTAAAATATGTGAAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATGGTCAGGCTCAGTTTCTAGA
TTGTGCTCCAGCCATGTTCTTT
>chr3B_105
CAGGATT-------------------------------------------------------------------------
------------------------------CAAGCAGGCCGGGCTAAAAGTTTAACGCTTATAACAAACCAGAAAATTAT
CCCA-------------------ATAGCTCAATTGCACAGTTAT-CGAGAATTAGAAATCGAGATTTAACGATCCAACAA
AATATATAATCATGACCAGAATTACAAGTAATAGTACAAGACAACATTTTCTGGATTGAGTTGAACACGAGGTTTCAGAT
TCTGTACTGTTAATTGGTTGGTTTCATATTCTGCAGCAAACCATGGCGAT------------------------------
-----------------------------------------------------------------------GCTCCTGTC
TCCAATGCGCGGGCCGCCGCATCGCGAGAAGCAGATGGGCGCGGGGAGAAAACCCCCACGCACATTTTCAAGGAAACCAC
ACACTGGCAAAACCACACATGGC------------------GACTCGAATTCATTGAAGTTCAGAACAGGGATACATATT
GCTCTGCTTGTAGTAGTTACAGAACCAGACGTGTACTGGATCCTGCATCTCTGCACTTGTAGCAGCTGCAG---------
---------------------------------------------ACTAATCTAACAGTACAACATTGAATCAGTGCATA
CACTTAACATCTCACCGACCTAATCTAACAGTACAAGACTGAATCAATGCA-----------------------------
---------------TATCCTTCAATTTCTACG--------ATTCGAATGAATAACATTCGCGGTAGGGTTCAGAGCTTT
TTTTTTTTTTGAGACAA---------------------------------------------------------------
-------------------------------------------------GTAGGGTTCAGAGCTGAAGGGCTGGCGCTGC
GCTGGGCGTACTGGGCTGGCTCCTGGCGCATCAGCAACGGCCGAG--------TGTCTGGGCCTGTTGAAGGCTTCAGCC
CAGGCCCAGGTTT-GGCCCAGACCGTTTAGGCCCAGTTCAA--------------------TC-----------------
---------------CACGAGACGAGAGGGCAAAACCTACCTCCCCTCCCCTTCCCCCCTAAA-CGCCGCCGTCACGCAC
TGCCACAAGCAGTCCACCACTCACCT-----CTCTTGCTTGCCGCCGGCGACCATGGCGGACGCCGCGAGAGGAGCAACG
GCGCCGCCTCCCGGCGG------CAGCCTCCCAGACGAGATCACCATCTGGGAGATCCTCGTCCGTCTGCCCCCCAAATC
GCTCCTCCGCTGCCGCGCCGTCTGCCGCGCATGGCGCAGCGCCACCTCCACCCGCCAATTCCTCCTCGCCCACCACGCCC
TCCAGCCCGCCCTCCCCCTCCTCTACGGCTACAACTTCGTCGGCGACGAGGTCGAGTCCCTCGACATCATCCCCTTCCAC
CAGCGGGCAGGCGCCGACC------AGCCCCAGCTCCAGCTCCACCCCGTCGCGCGGCTTGAGCAAGACTCCGACTTCCA
CCATCTGGAGGCCTGCTGCGACGGCCTCCTGGTCCTCTCCTTCCGCCACACCAGCGTCCGTGACTGGCGCTTCGCCGTCT
GCAACCCCTCTACTCGTCAGTACGCGCCCCTCCCGTTGCCTTATGGCTGTAACATCGAGTACTCGCTCCTCGGGATGTAC
CGGCACATCCCCACCGGCGACTACCGACTGTTGATGTACCGGGACTCAGTATTGATGCCTCATGAACTGGTACCTGACCC
CCCTGAAGACGGCTCCTACATCTTCACGTTAGGCTCGGGCCAGCCACCGAGGTACATAGGGTTCCCCGATGCGCAGGTGC
TGACATACACCTTTGGATCTCTCCTGTTTCGTGGCTGCCTGCATTGGCACCCACCAGGCAGCACGATAACGGTGTTCGAC
ACCACTACTGAGTTGTTCTGGCAGATGCGTGCTCCGGTTGTTACT---GGCCATGCTAAGTTGTTTCAGATGGATGGAAT
GCTTGGCATGCCCGGCTTTAATGATGCTGCGACAGCCATTGATATCTGGGTGGCGCAGGACTATGAGAGGGAGGTCTGGG
CCTGCAAATACCGGGTAGACTTCTCATTTGCAGACCTCACTCTGCAGTTTGGCAAGTTGGACGAAAGTTCTTGGGTGGTG
GCTGTGCCTTGGGATGGTGACGTGCTCCTACTGATCAATTTTGGTGAGCGGCTACTTCAGGTTGACATTGAGGGCAAGTT
GGTCGCTACTTCCCATCGCAGAGGCCTCGGTCCTGCAAATCTTTGGCTCAAGCAAACTCTTGTTCAACATACCTTCTTTC
CAACACTCGAGGGTTATGTTGCCAACTCTGCACCTTTCATCTGACGGATGTTATATCAAGTGGTGAT----TCTA----G
CCCAACTTTCAGTATCCTCATGAGCTGCAGTGTGTATGAATTCGGTCCACTATGAGCCAGCTAGTTTCATTTTGATGCAT
AGACAAGTTATGATCAACAAGCTTGACTGTTTCATGGTTAT---------------------------------------
------GTTTATATTTCTTTGAATATTCTTCTGGGCTGAAGTGGCTACTGTGAGTCTTGATGCTAAA-TTGCAAGTCT--
--------------------------------------------------------------------------------
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----------------------
>chr3D_106
-AGGATT-------------------------------------------------------------------------
------------------------------CAAGCAAGCCGGGCTAAATGTTCATCGCATATAACTAACAAGAAAAGTAC
CCCATA---------AAACAACTGTAGCTCAATTGCACAGCTATGGTAGAATTAGAAATTGACATTTATCGATCCAACAA
AATAGAGATACATGACCAAAATTACAAATAATAGTACAAGAGAATATTATTCGGACTGAACTGAACACGAGGTTTCAGAT
GCTGCA--GTTAATTGGTTGGTTTCAGATTCTGCAGCAAACCACGGCGGTGCCCCTGTCTTCAGTCTGCAGCGGCGGTTG
ACCATGAGGTTTCAGATTCTAATTGGTTGGTTTCAGAGAATATTATTCAGACTGCAGCAAACCATGGCGTCGCTCATGTC
TCCAATGC------------ATCGCGTGAAGCAGATCAGCGTGGGGA-------------------------GAAACCAC
AGACTGATAAAATCTAAT------ACACAGGATGAACGGTTGACTTGAATTCATTGAAGTTCAGAACAGAGATACATATG
G-----------------------------------------------CTCTGCTTGTGGCAGTTAGATAATCAGAGATG
TACTGAAGCTAACAGGGATACAGGCTATCTAACTGAAGGTGACGAGCTAATCTAACAGTACAACACTGAATCAATGTATA
CACTTGAGTTGAGACG----------------------------------------------------------------
-----------CACTTATCCTTCAACTTTTACAGTGGACGAATTCGAATGAATAACATTCACCTTGCTCT------GGAT
TTCAGTTGACGCGGGTGCTGCCTGCCCTTCGATGAGGAGATGCCACCAGACGGTACGGGATTGCGGCGGACCGT----AT
CTAGTGGCGGCGCCGG-CGCCGGCGCTCCGCCCGGCCG---------CGGTAGGGTTCAGAGCTC-AAGCCTGGCGCTGC
GCTGGGCGAAATGGGCTGGCATCCGATGCATCCATCAGTGTGTATGGCCGAGATGTCTGGGCCAGTTGAAGGCCTCAACG
GAGGAGGCAGCCCAGGCCCAGCCCGTTTAAGCCCAGTTCAAAGGCATTTCTTCTGC-TGTTTC-----------------
---------------CACGAGAGAGCAGACCAAAACCTACCTCCGCTCCCCGCCCCCTCAACGCCGCCGTCA-------C
TGTCACAGGCAGTCCACCACTCAGTTCACTCCTCTTGCTGGACGCCGGCGACCATGGCCGACGCCGCAAGAG---CAACG
GCGCCGCCTCACCACGG------CAGCCTCCCGGACGAGATCACCAT---GGAGATCCTCGTCCGGCTGCCCCCCAAATC
GCTCCTCCGCTACCGCGCCGTCTGCCGCGCATGGCGCAGCGCCACCTCCACCCGCGGCTTCCTCCTCGCCCACCACGCCC
TCCAGCCCGCCCTCCCCCTCCTCTACGGCTACAACTTCGTCGGCGACGAGGTCCAGTCCCTGGACATCATCCCCTTCCAC
CAGCGGGCAGGCGCCGGCCAGCCCCAGCTCCAGCTCCAG------CCCGTCGCGCGGCTTGAGCAAGACTCCGACTTCCA
CCACCTGGAGGCCTGCTGCGACGGCCTCCTCGTCCTCTCCTTCCGCAACACCAGCGTCCGCGACTGGCGCTTCGCCGTCT
GCAACCCCGCTACTCGTCAGTATGCTCCCCTCCCCTTGGCTTATGGCTCCGGCGTCGAGTACTCGCTCTTGGGGATGTAC
CCACACATCCCCACCGGCGACTACCGGCTGTTGATGTACCGGGCCTCAGCATTGATGCATGGTGAACTGGTGCCTGCCGC
TGCTCAAGACGGCTCCTACATCTTCACATTGGGCTCCGGCCAGCCACCGAGGCACATAGGTTTCCTTGACGCGGAGGTAC
TGACGTACACCTTTGGATCTCTCCTGTTTCGTGGTAGCCTGCATTGGCACCCACCAGGCAACATGATAATGGTGTTCGAC
ACCACGACCGAGTTGTTCCGGCAGATGCGCGCTCCGGTTGTTCCTCCTGGCCATGCTAAGTTGTTTCAGATGGATGAAAT
GCTTGGCATGTCCGGCTTTAATGATGCAGCGACAACCATTGATATCTGGGTGGCGCAGGACTACGAGAACGGGGTCTGGG
CCTGCAAATACAGGGTAGAGTTCTCAGTTGCAGACCTCACTCCGCGGTTTGGAAAGTTTGACGAAAGTTCTTGGGCGGTG
GTCGTGCCTTGGGATGGTGACGTGCTCCTACTGGTCAATTTTGGTGAGTGGCTGCTTCAGGTTGACATTGAGGGCAAGTT
GGTCGCTACTTTCCATCGCAGAGGCCTCGGTCCTGCAAATCTTGGGCTCAAGCAAACTCTTGTTCATCATACCTTCTTTC
CGACACTGGAGGGTTATGTTGCCAACTCTTTGCCTTTCATCTGACAGATGTTATGTCAATTGGTGAT----TCTA----G
CCCAACTGTCACTATCCTCATGAGCTGCAGTGTGTATCAGTTCGGTCCACTATGAGCCTGCTAGTTTCATTTTGATGCAC
AGACAAGTTATGATCAAGAAGCTTGACTGTTTCATGGCTAT---------------------------------------
------GTTTATATTTCTCTGAATGTTCTTCTGGGCTCAAGTGGCTGCCGTGAGTCTTGATGCTAAAATTACAAGTCTCT
GTTTAT---------------------------------TTAACTGAAGAATTT-CTTCTCCTTTTATCAAGGTCCTCTT
TTTATAGATAACCATTGCTCTTCTTAATACTAAATAATTAGTAAATGTACATTTGATTTATGTTTCTCTGTTTTGTTTTA
GCTGACAA-GAAATGAGGCAGATTATCCTTTTTTTAATTATA--GTCAATTTTTCAATCAAATGTTGTGCTGCAGTTCAT
TTCTTTTTCATGATTCCATTGCATTTGGTT-AGGTATTGAGACATACTGTTTTAATCCTTCCTTTACACTGTA-------
TCATTTGGAGTTATATTTATCACTTCACTTTATCTGTAACCATTTTAAGGAATCAATGATTCATGTGATGTTTGATCTTA
ACATAAGCTCGAGAAATGGAACCTTCATTGATAATAAGTAGTAGAAAGGTTGTCAT------------------------
--------------------------------------------------------------------------------
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----------------------
>chr3A_654
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----------------------------------------AATTCGAATGAATAACATTCACCTTGCTCTTGCTCTGGAT
TTCAATTGA-------------TGCCCTTCAATGAAGGGATGCCCGAGGACGACTGAACGA----GCCGACCGT----GT
CTAGTGGCGGCGGCGC-------CGCTCCGCCCGGCCGTGCCGTTCGCGGTAGGGTTCAGAGCTG-AGGGCTGGCGCTTC
GCTGGGCGTACTACTG----------------------GGCCGAG--------TGTCTGGGCCTGTGGAAGGCTTCAGCC
CAGGCCCAGGTTT-GGCCCAGGCCGTTTAGGCCCAGTTCAA--------------------TCTTTTTTTTTTGCGGGTG
AGGCCCAGTTCAATCCACGAGACGAGAGGCAAAACCTA-----------------CCTCAACGCCGCCGCCGTCACTCCC
TGCCACAAGCAGTCCACCACTCAGTTCACTCCTCTTGCTTGCCGCCGGCGACCATGGTGGATGCCGCAAGAGTG---ACA
GCGCCGCCTCCCGACGG------CAGCCTCCCGGACGAGATCACCATCTGGGAGATCCTCGTCCGGCTGCCCCCCAAATC
GCTCCTCCGCTGCCGCGCCGTCTGCCGCGCCTGGCGCAGCGCCACCTCCACCCGCCGCTTCCTCCTAGCCCACAACGCCC
TCCAGCCCACCCTCCCCCTCCTCTACGGCTACAACTTCGTCGGCGACGAGGTCGAGTCCCTCGACATCATCCCCTTCCAC
CAGCG--------------------AGCTCCAGCTCCGG------CCCGTCGCGCGGCTTGCGCAAGACTCCGACTTCCA
CCATCTGGAGGCCTGCTGCGACGGCCTCCTCGTCCTCTCCTTCCGCAACACCAGCGTCCGTGACTGGCGCTTCGCCGTCT
GCAACCCCGCGACTCGTCAGTACGCTCCCCTCCCGTTGGCTTATGGCTCCGGCGTCGAGTACTCGCTCTTGGGGATGTAC
CCACACACCCCCACCGGCGACTACCGACTGTTGATGTTCCGGGACTCGGTATCGATGCATCATCAACTGGTACCTGACGC
CGCTCAAGACGGCTCCTACATCTTCACGTTAGGCTCCGGCCAGCCACCGAGGCACATAGGGTTCCTCGAAGCGGAGGTGC
TGACATTCACCTTTGGGTCTCTCCTGTTTCGTGGTAGCCTGCATTGGCGCCCACCAGGCAACATGATAATGGTGTTCGAC
ACCACGACTGAGTTGTTCTGGCAGATGCGCGCTCCGGCTGTTCCTCCTGGCCATGCTAAGTTGTTTCAGATGGATGAAAT
GCTTGGCATGTCTGGCTTTAATGATGCAGCGACAACCATTGATATCTGGGTGGCGCAGGACTACGAGAGCGAGGTCTGGG
CCTGCAAATACCGGGTAGACTTCTCAGTTGCAGAGATCACTCTGCGGTTTGGAAAGTTTGACGAAAGTTCTTGGGTGGTG
GTCATGCCTTCGGATGGTGATGTGTTCCTACTGGTCAATTTTGGTGAGTGGCTACTTCAGCTTGACATTGGTGGCAAGTT
GGTCGCTACTTTCCATCGCAGAGGCCTCGGTCCTGCAAATCTTCGTCTCAAGCAAACTCTTGTTCAACATACCTTCTTTC
CAATACTAGAGGGTTATGTTACCAACTCTCCGCCTTTCATCTGACAGATGTTATGTCAAGTGCTGAT----TCTATCTAG
CCCAACTGTCAGTATCCTCATGAGTTGCAGTGTGTGTGAATTCGGCCCACTATGAGCCAGCTAGTTTCATGTT-------
--------------------------------------TAT---------------------------------------
------GTTTATGTTTCTCTGAATATTCTTCTGGGCTGAAGTGGCTGCCGTGAGTCTTAATGCTAAAATTGCAAGTCTCT
GTTTACTTTATATTTCTATTTTTATATTTCTCTGATCATTTAACTGAAGAATTAACTTCT--------------------
-------------------------------------------------CATTGTATTTCTGTTTTTATGTTTTGTTTTA
GCTGACAATGAAATGAGGCAAATTATCCTGTTTC-AAT--TA--GCCAATTTTTCAGTGAAATGTTCTATTGCGGTTCAT
TT-TTATTCATGATTCAACTGCATTTGGTT-AAGTACTGAGATATACTGTTTTAATTCTGCCTTCATGTTGTATCATTAT
TCATTTGGAGTTATATTTATCACTTCACTTTATCTGTAGCCATTTTAAGGAATCAATGATTCGTGTGATGTTTGATATTA
ACATAAGCTCGAGAAATAGAACCTTTATTT---ATAAGTAGTAGAAAGGTTATCAT------------------------
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------------------------------------------------------------GGTCAGGCTCAGTTTCTAGA
TTGTGCTCCA------------
>chr3D_1048
CC------------------------------------------------------------------------------
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----------------G------CAGCCTCCCGGACGAGATCACCATCTGGGAGATCCTCGTCCGGCTGCCCCCCAAATC
GCTCCTCCGCTGCCGCGCCGTCTGCCGCGCGTGGCGCAGCGCCACCTCCGCCCGCCGCTTCCTCCTCGCCCACCACGCCC
TCCAGCCCACCCTCCCCCTCCTCTACGGCTTCAACTTCGTCGGCGACGAGGTCCAGTCCCTCGACATCATCCCCTTCCAC
CAGCGGGCAGGCGCCGGCC------AGCTCCAGCTCCGG------CCCGTCGCGCGGCTTGAGCAAGACTCCGACTTCCA
CCATCTGGAGGCCTGCTGCGACGGCCTCCTCGTCTTCTCCTTCCGCAACACCAGCGTCCGCGACTGGCGCTTCGCCGTCT
GCAACCCCGCTACTCGCCAGTACGCTCCCCTCCCCCTGGCTTATGGCTCCGGCGTCGAGTACTCGCTCCTGGGGATGTAC
CCGCACATCCCCACCGGCGACTACCGGCTGTTGATGTACCGGGCCTCAGCATTGATGCATGGTGAACTGGTACCTGCCGC
CGCTCAAGACGGCTCCTACATCTTCACTTTAGGCTCCGGCCAGCCGCCGAGGCACATAGGGTTCCTCGATGCGGAGGTGC
TGACATATACCTTTGGATCTCTCCTGTTTCGTGGTAGCCTGCATTGGCGCCCACCAGGCAACATGATAATGGTGTTCGAC
ACCACGACTGAGTTGTTCCGGCAGATGCGCGCTCCGGTTGTTCT---TGGCCATGCTAAGTTGTTTCAGATGGATGAAAT
GCTTGGCATGTCCGGCTTTAATGATGGGGGGACAACCATTGATATCTGGATGGCGCAGGACTACGAGAGAGGGGTCTGGG
CCTGCAAATACCGGGTAGAGTTCTCGGTTGCAGACCTCACTCTGCGGTTTGGAAAGTTTGACGGAAGTTCTTGGGTGGTA
GCCGTGCCTTGGGATGGTGACGTGCTCCTACTGGTCAATTTTGGTGAGTGGCTACTTCATGTTGACATTGGTGGCAAGTT
GGTTGCTACTTTCCATCGCAAAGGCCTCGGTCCTGCAAATCTTCAGCTCAAGCAAACTCTTGTTCAACATACCTTCTTTC
CGACACTTGAGGGTTATGTTGCCAACTCTGCGCCTTTCATCTGACGGATGTTATATCAAGTGGTGAT----TCTATCTAG
CCCAACTGTCAGTATCCTCATGAGCTGCAGTGTGTATCAGTTCGGTCCACTATGAGCCTGCTAGTTTCATTTT-------
--------------------------------------CATGCATAGACAAGTTATGATCAAGAAGCTTGACTATTTCAT
AGTTATGTTTATATTTCTCTGAATATTCTTCTGGGCTGAAGTGGCTGCCGTAAGTCTTGATGCTAAAGTTGCAAGTCTCT
GTTTAC---------------------------------TTAAGTGAAGAATTAACTTCTCCTTTTATCAAGGTCCTCTT
TTTATAGATTACCAGTGCTCTTCTTAATACTAAATAATTAGCAAATGTATATTTGATTTATGTTTGTCTGTTTTGTTTTA
GCTGACAA-GAAATGAGGCAGATTATCCTGTTTT-AAT--TATAGTCATTTTTTCAATGAAATGTTGTGCTGCAGTTCAT
TTCTTTTTCATGATTCCATTGCATTTGGTT-AGGTATTGAGACATACTGTTTTAATTCTTCCTTTACGTTGTA-------
TCATTTGGAGTTATATTTATCACTTCACTTTATCTGTGACCATTTTAAGGAACCAATGATTCATGTGATGTTTGATCTTA
ACATAAGCTTGAGAAATGGAACCTTTATATTG-ATAAGTAGTAGAAAGGTT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>SNPs
-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------
---S--SSSSSSSSS-----------S----S-------------------S----------S--SS--SS---------
------------------------------S---------------------S-----------S--S-------S----
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
---------------------------------S--------------------S----S--SS----------------
-----------------SS-SSSS-----S------------------------SS----------S------------S
------------------------------------------------------S-------------------------
--------------------------------------------------------SSS-SSS---SSS-----------
------------------------------------S-SSSS-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS----------------------------------S----------------------------------
-------------------------------------------------------------SSSSSSS--SSSSSSSS--
S---------------S---------------------S--------S--------------------------------
------------------------------------------------------------------------------S-
---------S----------------------------------------------S-----------------------
-----------------S------------------------------------------S-------------------
-----------------------------------------S----------------S---------------------
-S---------------SSSSSS-----------------------------------------SS-----S--------
---S-----------S------------------S--S-----------------------S------------------
---------------------------S-------------------------------------------------S--
--SSSS------------------------------------------------------S-S----S---------S--
------------------S---------------------------------------------------------S---
-------S--------------------------------S------S----S-S---------------------S---
-------S---------------------SS-----------S-----S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-------S----S---------------------S---
-----------------------------------------------S------------------------------S-
--------------------------------------------------------------------------------
-------------S--------S----------------------------S------S--------SSSS---------
----------------------------S--------------S-----------S------------------------
--------------------------------------------------------------------------------
---------------------------------S---------------S------------------S-----------
--------------------------------------------------------------S------------S----
------------S-------------------------------------------------------------------
---------------------------S----------------------------------------------------
------------------------S-----S---------------------S---------------------------
-----------------------------S-S------------------------------------------------
---------------------------------S----------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
----------SSSSSSSSSSSS
>forward_1402
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----------------------CCGTCACTCCTCTTGCTTGT--------------------------------------
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----------------------
>reverse_3351
--------------------------------------------------------------------------------
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----------------------------------------------------------------------TGTTGTAAGC
TACAGGGGCC----------------------------------------------------------------------
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----------------------
