>input_sequence_68814
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-----------------------------------------------------------------ATGGCAGCGGCTGCA
GGAGGAGACGAGGTGAAGCTGCTAGGCGTGTGGGACAGCCCGTTCGTGAACAGGGTGCAGATCGTGCTCAACCTCAAGGG
GATCAGCTACCAGTACGTCGAGGAAGACCTCCACAACAAGGGCGAGCTCCTCCTCGCCTCCAACCCCGTGCACAAGAAGG
TGCCCGTCCTCATCCACAACGGCAAGCCCATCCCGGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGTCTGGAGAGGC
GCCGGCCCGAGCGTCCTCCCCGCCGGCCCGCACGAGCGCGCCACCGCCCGGTTCTGGGCCGCCTACGTCGACGACAAGGC
AAGTATTACGCGACGCATCGCCGTCTCTTCACCGCCCGCTCTTTCTTTGCTCTGTTCCTGTGCGGAAGTAATGAAGCTCG
ATGCGACGGATGTGCTGCAGGTTGGGTCGCCGTGGTTCACCATCCTGTTCGCCCGCAAGACCGAGGAGAAGATCGAGGCG
GCTGTACGGGCCATCTCGGCGATGGAGACGCTGGAAGGCGCGTTCGGGGAATGCTCCGGTGGGAAGCCGTTCTTCGGCGG
CGACGGCATCGGGTTCGTCGACGTTGTGCTCGGCAGCTACCTGGGCTGGTTCGTGGTGATCGAGAAGATGATCGGGATCA
AGCTCCTGGACGCGGCGAGGACGCCGGCCCTGGCCGCGTGGGCTCAGCGGTTCAGGATGGCGGATGCGGTGAAGGGTGTC
TTGCCTGAAGATGTCGACAAGGTGCTCGAGTTTTTGCAGACGTTCCTTGATTA---------------------------
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--------------------------------------------------------G-----------------------
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>chr1A_1_TraesCS1A01G186200
ATGCATACAATCATCTTATTAGTTATATTCACCAAGATCTCACAATCAATAAGTTTGAAGGCACTGCCTTGACAACATAT
GTCGCTACACCTATTAATTTGATGAAGGGGTGCGTATTGTCGGGGTTCGCGCGTGTGTTGCCAAACACCTTGCCGTGGTG
CCGCAATCGCGCGCGTGTGTTGCCCCAGACCCTACCGTGGTGCCGCAATCGTCGGGTCTGGGGCACACACCGGTCCAGCA
CACTCCCAGTCTCAGCAGGCACCACATGCACACGTTACAGTGGCCGCCGCCATCATCTTTCATCGATCGATTTTCAGAGC
AGGTACCAACATATCGACCTTGCCAGGTCTGCCGTCGACGTCATCACGGCGCGAGACAATGTCACTACCCTACGTGTGTC
CATCGTCACACATTCGTCGCTGAGATCCTGCAGCGCTACACCGGAGTGCTACGTGTTGTTGCCCGGAGTGGTTCTCTTTG
ATGATCCGAGATAAATGTGTTTGGTTCTCTTCTCGCGCGCGAATTATTGCTCGGAGCGCTACGTGCACGTTGGACGACAG
CTCGAGAGGCGCATATATCTCTTTGATTGATGATCCGATGCGTGCAGCACGGTACCTACCAGCTGTTCGCAAAAAAAAAA
GGGTACCTTTTCGCAAAAAAAGATACCTACCGGCGCTTTTCTCCTATACTAG--GTTTTTTCCAACAACAAAAAATGTGG
GAGACAAGCTTTGTTCTACTCCATATCACCAATGACTAATCTTCAGTTGGCACATCAATTCACTCGATTGCCACGAGCCC
ATG--------------------ATTAACCGACCTGATCACCAAACATATAAAAAAGCTCCGAATTATAGACAACCTAA-
--CAGCAGCGCTGAACTCCCCGAACTCCGAAATGTCCACTCGTTTATAACCAGTCGTCTTCAAGTCCAAGGCTCCAGCAT
CCAAGATCCCATCACCAGCACATCCCAAGAACCCAGAGATCCAAGCGCTGAGCCACGGCGTGTCAATGGCAGCGGCTGCA
GGAGGAGACGAGGTGAAGCTGCTAGGCGTGTGGGACAGCCCGTTCGTGAACAGGGTGCAGATCGTGCTCAACCTCAAGGG
GATCAGCTACCAGTACGTCGAGGAAGACCTCCACAACAAGGGCGAGCTCCTCCTCGCCTCCAACCCCGTGCACAAGAAGG
TGCCCGTCCTCATCCACAACGGCAAGCCCATCCCGGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGTCTGGAGAGGC
GCCGGCCCGAGCGTCCTCCCCGCCGGCCCGCACGAGCGCGCCACCGCCCGGTTCTGGGCCGCCTACGTCGACGACAAGGC
AAGTATTACGCGACGCATCGCCGTCTCTTCACCGCCCGCTCTTTCTTTGCTCTGTTCCTGTGCGGAAGTAATGAAGCTCG
ATGCGACGGATGTGCTGCAGGTTGGGTCGCCGTGGTTCACCATCCTGTTCGCCCGCAAGACCGAGGAGAAGATCGAGGCG
GCTGTACGGGCCATCTCGGCGATGGAGACGCTGGAAGGCGCGTTCGGGGAATGCTCCGGTGGGAAGCCGTTCTTCGGCGG
CGACGGCATCGGGTTCGTCGACGTTGTGCTCGGCAGCTACCTGGGCTGGTTCGTGGTGATCGAGAAGATGATCGGGATCA
AGCTCCTGGACGCGGCGAGGACGCCGGCCCTGGCCGCGTGGGCTCAGCGGTTCAGGATGGCGGATGCGGTGAAGGGTGTC
TTGCCTGAAGATGTCGACAAGGTGCTCGAGTTTTTGCAGACGTTCCTTGATTA---------------------------
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--------------------------------------------------------GGTGCGTGGA-AGCGCTGTCAGCG
GTTTGGACTTTCGATTATTAATTTTCGAGGAAATTTGGAC--TTTCGATTTGTTTCTTTTCAAATGTGGGGTTGTAATGG
GCCATCGCTTATTTCACGGCCTACAAAAAGGATTTAATAAAAGATGGCCTCAAATTATTAACTTTTAAACAATTCTCGCT
ATCAGCTGTCAGACATC-TTTCAATACACGAATGCTTAGACGAGGTGCTAGCACAATAAAATGAGAGCAACTAGTTAACG
AGCGCTTCTTCGGGAGGCTCACAATGATCAACGCCACTTAGCACGCTCTCAGCCACCCGTCACGTGTCGCGCTCTAGGCG
TTCTCTTTGGATATTTTTTATTTTTCGCACGCGTTTTTGACTTTTTAAACAGTTTTTTCCTTTTTTTCGACGTTTCGGTT
TTTATCGGTCTTCTTTAACTTTTGGAACAAAAAAAATTTGAAAAAAAATGCGTGAAAAGCCGCATTTTTTTCGCGAGAGT
CACAGTTTTGCTTTCGAGAGAGGCACGGTTGTGCTTTCACGAGTGGCATGGTCGTGCCTCTTGTTGGGGATATTACTACT
GGAGGTAAACCGGCCTTATGTAGCCGGGTTGACTCTTTGAAGATTAGAAGCCCATGAAGATGTAAAAATGATGGCGCTTT
ACGAAGGGCCCAAAGCCGGGTTACAGTCTGTAAATGTAAACCGGCCTAGTCATGTAACTTGTATAGTAAGATAGAAAGAG
AGAGGCCGAACCGGATACGTTTATAATCCGGCTTCGGGACTCTATAGCCCGGCGGGCGTCAATCTATGTATATAAAGGGA
CGACCCGGCCGCGGTTTAGAGACAACAACAACTCGAGAGCCAGACAAAGCGGATTCGCTCCCTGGCCTTCGAAACCCTAG
CAATACCAATCACAACTAGACGTAGGTTTTTACCTTCATCGAAGGGGCCGAACTAGTATAAACTCCCGTGTCCCCTTGTC
CGGTTTAAACCCTTTAAGCTA
>chr1D_496
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---------------TGTGTTTGGTTCTCGCCTCGCGCGCGGATTATTGCCCGGAGCGCTACGTGAACGTTGGACGACAG
CTCGAGAGGCGCATATCTCT------TTGATGATCCGATGCGTGCAGCACG-----------------------------
CACGT------------------TACCTACCGGCGCTTTTCTCCTATACTACTCGTTTTTTCCAACAACAAAAATGGTGG
GAGACAAGCTTTGTGC-------TATCACCAATGACTAATCTGCAGTTGGCACATCAATTCACTCGATTGCCACGAGCCC
ATG--------------------ATTAACCGACCTGATCACCAAACATATAAAACA-CTCCAAATTATAGACAACCTAAC
AGCAGCAGCGCTGAACTCCCCGAACTCCGAAATGTTCACTCGTTTATAACCAGTCGCCTCCAACTCAAAGGCCTCAGCAT
CCAAGATCCCATCACCACCACATACCAGGAACCCAGAGATCCAAGCGCTGAGCCACGGCTTGTCAATGGCAGCGGCGGCA
GGAGGAGACGAGGTGAAGCTGCTAGGCGTGTGGGACAGCCCGTTCGTGAACAGGGTGCAGATCGTGCTCAACCTGAAGGG
CATCAGCTACGAGTACGTCGAGGAAGACCTCCACAGCAAGGGCGAGCTCCTCCTCGCCTCCAACCCCGTGCACAAGAAGG
TGCCCGTCCTCATCCACAACGGCAAGCCCATCCCGGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGCCTGGCGGGGC
ACCGGCCCGAGCGTCCTCCCCGCCGACCCGCACCAGCGCGCCACCGCCCGGTTCTGGGCCGCCTACGTCGACGACAAGGC
AAGTATTACACGACGCACCGCCGTCTCTTCGCCGCGCGCTCTCTGTTTGA----TTCTTGTTTGGAAGCAATTAAGCTCG
AAGCGACGCATGTGCTGCAGGTTGGGTCGCCGTGGTTCACCATCCTGTTCGCCCGCAAGACCGAGGAGAAGATGGAGGCG
GCAGTGCGGGCCATCTCGGCGATGGAGACGCTGGAAGGCGCGTTCGGGGAAAGCTCCGGGGGGAAGCCGTTCTTCGGCGG
CGACGGCATCGGGTTCGTCGACGTTGTGCTCGGCAGCTACCTGGGCTGGTTCGTGGTGATCGAGAAGATGATCGGCGTCA
AGCTCCTGGACGCGGGGAGGACGCCGGCCCTGGCCGCGTGGGCTCAGCGGTTCAGGATGGCGGATGCGGTGAAGGGTGTC
TTGCCTGAAGATGTCGATAAGGTGCTCGAGTTTTTGCAGACGTTCCTTGATTA---------------------------
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--------------------------------------------------------GGTGCGTGGA-A-CGCTGTCAGCG
GTTTGGACTTTCGATTATTATCTTTCGAAATTTTTTGGAC--TTTCGATTTGTTTCTTTTCAAATGTGGGGCTGTAATGG
GCCATCGCTTATTCCA-GGCCAACAAAAAGGATTTAATAAAAGATGGCCCCAAATTAAT---TTTTTAACAATCCTCGCT
GTCAGCTGTCAGGCCTCTTTTCAATACACAAATGCTTA------------------------------------------
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>chr1B_496
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---------------TGTGATTGGTTCCCGCCTCGCGCGCGAATTATTGCCCGGAGCGCTACGTGCACGTTGGACGACAG
CTCGAGAGGCGCATATCTCT------TTGATGATCCGATGCGTGCAGCACGGTACCTACCAGCTGTTCGGGAAAAAAAAA
CACGG------------------TACCTACCGGCGCTTTTCTCCTACACTAG--TTTTTTTCCAACAACAAAAATTGTGG
GAGGCAAGCTTTGTGCTACTCCATATCACCAATGACTAATCTGCAGTTGGCACATCAATTAGCTCCAAATTGAGCTGATC
ACCAAACATATAAAACACTCCAAATTAACAGACCTGATCACCAAACATATAAAACA-CTCCAAATTAACCGACCTGATT-
----GCAGCGCTGAACTCCCCGAACTCCGAAATGTTCACTCGTTTATAACCAGTCGTCTTCAAGTCCAAGGCCTCAGCAT
CCAAGATCCCATCACCAGCACATCCCAAGAACTCAGAGATCCAGGAGCTGAGCCACGGTTTGTCAATGGCAGCGGCGGCA
GGAGGAGACGAGGTGAAGCTGCTAGGCGTGTGGGACAGCCCGTTCGTGAACAGGGTGCAGATCGTGCTGAACCTGAAGGG
GATCAGCTACGAGTACGTCGAGGAAGACCTCCACAGCAAGGGCGAGCTCCTCCTCGCCTCCAACCCGGTCCACAAGAAGG
TGCCCGTCCTCATCCACAACGGCAAGCCCATCCCGGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGCCTGGCGCGGC
ACCGGCCCGAGCCTCCTCCCCGCCGACCCGCACGAGCGCGCCACTTCCCGGTTCTGGGCCGCCTACGTCGACGACAAGGC
AAGTATTACACGACGCATCGCCGTCTCTTCACCGCCCGCTCTTTCTTTGCTCGGTTCCTGTGCGGAAGTAATTAAGCTCG
AATCGACGGATGTGCTGCAGGTTGGGTCACCGTGGTTCACCATCCTGTTCGCCCGCAAGACCGAGGAGAAGATGGAGGCG
GCAGTGCGGGCCATCTCGGCGATGGAGACGCTGGAAGGCGCGTTCGGGGAATGCTCCGGGGGGAAGCCGTTCTTCGGCGG
CGACGGCATCGGGTTCGTCGACGTTGTGCTCGGCAGCTACCTGGGCTGGTTCGTGGTGATCGAGAAGATGATCGGGGTCA
AGCTCATGGACGCGGCGAGGACGCTGGCGCTGGCCGCGTGGGCTGAGCGGTTCAGGATGGCGGATGCGGTAAAGGGTGTC
TTGCCTGAAGATGTCGATAAAGTGCTCGAGTTTTTGCAGATGTTCCTTGATGGCATGTACAATGCATAGCCTCAAGGTGA
TGCCTCGCATGCCATGTAGGATCGGATATGACGTAAAGTAGGTTTGTATAGGGAAGCAGAATCCTCTTCAGGAGGCGGGT
GCTTGAAGAGAAAAAACGTGATCCGATGACAAAAGTTGAAAATGTTGGAGTGAAAAATAGAGATGCATGTGTACTGGAGT
CTTTATTTTTTATTTCTTAATGAGGCCCACTAGTGATAGCTTACATTGGAGAGGAAAAATGAATGTAGGTGCTTCAAATT
ATTTTTTGTCATGAGGCATATGTATACATATGCCACCATTGTACATGCCCTGATTGGGTGCGTGGAGA-CGCTATCGGCG
GTTTGGACTTTCGATTATTATTTTTCAAAAGAAAAATTGGATTTTCGAGTTGTTTCTTTTCAAATGTGGGGTTGTAATGG
GTCATCATTTATTTCAGGGCCAACAAAAAGGATTTAATAAAAGATGGCCCCAAATTAAT---TTTTAAACAATTCTCGCT
GT-AGTTGTCAGGCCTC-TTTCAATACACAAATGCTTAGATGAGGTGCTAACA---------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS--------------SS-------------------S-----------------------------
----------------S---SSSSSS-------------------------------------------SS---------
SSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------S-----
--------------S---------------------------S-------------------------------------
------------------------------------------------------S-S----S------------------
-----------------------------------S------------------------------------SS------
-----------------------------------------------------------S----------------S---
--------------------------------------------------------------------------S-----
----------S------------------------S--------------------------------------------
---------------------------------------------------------------------S----S-S---
S------------------------S------------------------------------------------------
---------S------------------------------------------S-------------------S-------
-S-----------------------------------------------------------------------S------
--S--S-----------------------------------------------------S--------------------
----------------------------------------------------------------------------S---
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-----------------S--------------------------------------------------------------
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--------------------------------------------------------------------S-----------
--------------------S-------SSS-------------------------------------------------
----------------S----S---------------------------S-------S-SSS------------------
S-----------S-S--------------S----------S---------S--SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS
>forward_420
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CATCGTCACACATTCGTCGC------------------------------------------------------------
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>reverse_2651
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----------CTTTCGAGAGAGGCACGGTT--------------------------------------------------
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