>input_sequence_68762
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-----------------ATGTCCTTCCACAGCGGCACCGGTGGTGACATACCCAGCTCCAGCAACGCACCACCTGACGAA
ATGGCATCGCCCGCCTCCTTCACCCACCACCCAGGTAATAACCAAATCAATATGTATTTTCCTTAAACCACAAAAAAATA
ATATCTATTTTCCTTGTTCATGATTTTTTTTTTGCGGAGTTCCTTGTTCATGATTTCATCT-------------------
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----------------------------------------------------------------TATACTGTATTTATTA
TATAGCCTTTTGTTGTGAATGGATGGAGTACGTATATCTTTTCCAGCTCATTCATATGTTTGGAGGTTAAAATTTGTGGA
TCATGTATCACACAAGGCAAACTTCAATTTTTGACAGCTTTTCTCATGACATATAAATGACTTGCATCTGTAGGTAAAGT
GAAAATTCTGCCTTCAGACAAGGACGTTGAGTCCGAGGAAGCCCTGTGGGCCTTGTATCTGCGCTGGTGCAACACTTTGA
ACCAGAAGCGTGACCATGATGAGATGGTTCGCCGGTTTGATGTATTCAAGGACACTGTTCGGATGGTCCACCGTGTCAAC
AAGGCTAAATTGCCTTACACTCTGAAAGTAAGTAAATTCGCTGATGGGAAGCTAGAAGAGTCAATGAGTCCAAAAGTGTT
TGATGAACCTGAATATTTCGCAACTCAAGCAAAGGATGGTAGATCTCGCCCTTTGGCAAATCGTCGGAAGGAAGGGGTTC
TCATCATTGAAACTGGTGAAGATGTGCCAGAATATCCCCAAATGAACTTCAAGTTCTCTGAATCTGGAGATTCCATCATC
CCCTTGGAATGA--------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G382900
CCACCTTCATGAGCCCCATGTAGGCGTCGGCGATGAAGAGCTCGCCTGTTTTCCTATTGAACCGGACACCCAGCGGTCGC
CCGCAGATGCTCTCTTTTTGTTCCGATGGCACCCCAGAATCCGAGCACAGAGGGATTTTCCTACACACGCCGCACATGTC
ACACGTAATCTAATTTGATCACGTCGTACGT-------------------------------ACACGATGTTTAGCTTGT
-AATTAC----ACCGACCTGTAGTTGGCATTGTACGCGAAGGTGCTCCAGCCGGCGGCGCTGCCGCCCCACTTGAGCACG
CGGCCATCGGAGACGCCGGTGTAGACCCCATCCTTGCCGGAGAAGGCGAGGCTCTCGGCGCCGCTGACGCCGTCGGGCAG
CGGGAGGCGGTAGCTCCACCGCGTGTTCGTCGTCTTGATCTGCTCGGCCGAGGATAGAGAGAGGAGGCAGGCAAGCACGA
CGACTAGTATCGCCGCGAGGTTGCGCCGCATCGTCATCGTCATCGTCG------------GAAGTTGCCTTGTACGGAAT
ATCGTTGCACGCAGCTGTGTGCCTTTTATGGGAGAGCACGCGCGACGAAACCCATGGCCACGTTTGGTGATCGGATCGGA
CACGGTCGTAATCCTACACGAAGTACGTCTACAACACCGTGATTTATCGCCCGCGCGCGCTCGGTGCGTGCGAACCCGCG
GCGCGT--------------------------------------------------------------------------
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-------------------------------------------------------GCTGTGTTTGTGGTCTTCTTCTTTT
CTTTTCTTTTTTAGGAGATGCTGTGTTTTTTATTTATATTACGGCCCAACGTGGAACCTTGGGCTGTTTTTCGAGCAAGC
TCATGGGCCGTGCGACAGGAGGTCCTAAAGAGAACGACCCCCTCCTCCCACCCATATATACCCTTCCCCACCCACCACCA
CCGACGCCGCCATCCACATCCAGGAGCCAGAGCCATCGTC----------------------------------------
TGACTTTGCTCGCGCCGCCAGCAAGATCGCGTCGGCTGGTCGGTGGGCAGCGCCGGTGACAGCGGCTCTCTCAGCCCCCT
CAGATCTGAGGAGCCGCATGTCCTTCCACAGCGGCACCGGTGGTGACATACCCAGCTCCAGCAACGCACCACCTGACGAA
ATGGCATCGCCCGCCTCCTTCACCCACCACCCAGGTAATAACCAAATCAATATGTATTTTCCTTAAACCACAAAAAAATA
ATATCTATTTTCCTTGTTCATGATTTTTTTTTTGCGGAGTTCCTTGTTCATGATTTCATCT-------------------
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----------------------------------------------------------------TATACTGTATTTATTA
TATAGCCTTTTGTTGTGAATGGATGGAGTACGTATATCTTTTCCAGCTCATTCATATGTTTGGAGGTTAAAATTTGTGGA
TCATGTATCACACAAGGCAAACTTCAATTTTTGACAGCTTTTCTCATGACATATAAATGACTTGCATCTGTAGGTAAAGT
GAAAATTCTGCCTTCAGACAAGGACGTTGAGTCCGAGGAAGCCCTGTGGGCCTTGTATCTGCGCTGGTGCAACACTTTGA
ACCAGAAGCGTGACCATGATGAGATGGTTCGCCGGTTTGATGTATTCAAGGACACTGTTCGGATGGTCCACCGTGTCAAC
AAGGCTAAATTGCCTTACACTCTGAAAGTAAGTAAATTCGCTGATGGGAAGCTAGAAGAGTCAATGAGTCCAAAAGTGTT
TGATGAACCTGAATATTTCGCAACTCAAGCAAAGGATGGTAGATCTCGCCCTTTGGCAAATCGTCGGAAGGAAGGGGTTC
TCATCATTGAAACTGGTGAAGATGTGCCAGAATATCCCCAAATGAACTTCAAGTTCTCTGAATCTGGAGATTCCATCATC
CCCTTGGAATGAATCATGTCATTAGCAATCCTGGATAGTTATGTGTGTACTGTGTTGTGCTTATTTGTATCCGGCCTTGC
TTCTGCAAGGCATCTATCAGTATGTCCACTAAGCAAATTATATAAGCTTACTTTGATGTTTTGCTCATTTTAGAATAAAG
GTTATGATGCTTC-TTTTTTCTCATTTTCTGTAGATATCT---TTACTTTGA-TTTTTT-GCTCATTTTACAATAAGTGC
CAGAATATTCTGTGAATAG-------------------------------------------------------------
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----TTGGATGTGATAGTATGTAAAACGTTGTTTTTTCACTGTCCATCAAATTTCTTACTGCTCCACCTTTGCTTGTGGC
TATTTCTGATTCTGTATGAACATTTAGAATCAATCTCAGTCAAGTGGTCTACTTATATTGGTACTAGGTTATCAGGTTCC
ATCATTTTTTCTTTGGAAGTGGGAATTCAGATTTGTTTCTTAATGCCTCATGTCATGGAGATTTGATGGTTATAAATT--
-GCCTGTACTGATCTCTTAGCAATCTGTGTAGCCAGATCAGTAGAGCTGAGGCAGATGATGTGAGAAAGGCCATAGAGGT
TTTCGAT----GAGATTTGTGCCAAGGATCCGGAATTCTTGTGCAGGGTCCAACCAGATTGAGAGTTGGGTAAACAATCT
GTTGTGGACGGCCGGTAGCAGCAGGATGCTGTACAAGTTTATTTTTTTGACACAATAATGTGTATAGAACAAATTTGTAC
CGCATGTCTTTTAGGTTGATTGCA--------------------------------------------------------
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------------------------------------------------------------------------------AG
TACTAGTATAAACAATCATTTTTCAAAGTGTATGAAGTAGCGAACCAACCCGTGGTTAGATGGTTAGAGGGACTGTGTTA
TCACCAGCCCACCACGTTTTCATCTGAGATGCTCATAGGCAGCGGCGGAGACAGGCCCCAGGCAGCCTGGGCCGCTGCCT
GAGGCGTGAAGACCAATTCCTTTGTTAAGTTTTGAAATAGTGCAGCTACAGTTCTCTACTGTAGCTACAGTGGACGAAGG
TGGCCTGGGGCTTGCCGTATTCCT
>chr5B_1
CCACCTTCATGAGCCCCATGTAGGCGTCGGCGATGAAGAGCTCGCCGGTTTTCCTGTTGAACCGGACACCCAGTGGCCGG
CCGCATATGCTCTCTTTTTGTTCCGATGGCACCCCAGAGTCTGAGCACAAAGGGATTTTCCTGCAGATGCAGCACATGTC
A-------GCTAATTTGCTGATCACTATCACGG---------------------------------GATGTTTAGCTTTT
AAATTAC----ACCGACCTGTAGTTGGCATTGTACGCGAAGGTGCTCCAGCCGGCGGCGCTGCCACCCCACTTGAGCACG
CGGCCATCGGAGACGCCCGTGTAGACCCCGTCCTTGCCGGAGAAGGCGAGGCTCTCGGCGCCGCTGACACCGTCGGGCAG
TGGGAGGCGGTAGCTCCACCGCGTGTTCGTTGTCTTGATCTGCTCGGCTGAGGCTAGAGAGACGAGGCAGGCAAGCACGA
CGAGTACTATCGCCGCGAGGTTGCGCCGCAT------CGTCATCGTCG------------GAAGTTGCCCTGTACGGAAT
ATCGTTGCACCCAGCTGTGTGCCTTTTATGGGAGAG------CGACGAAACCCGTGGCC--------TGATCTGATCGGA
CACGGTTGTAATCCTACACGAAG------TACAACACCGTGATGTATCGCCCGCGCGCGCT-------------------
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>chr5D_3
--ACTTTCATGAGCCCCATGTAGGCGTCGGCGATGAAGAGCTCGCCGGTTTTCCTGTTGAACCGGACGCCCAAAGGCCGC
CCGCAGATGCTCTCTTTTTGTTCCGATGGCACCCCAGAGTCCGAGCACAGAGGGATTTTCCTGCAGACGCCGCACATGTC
ACAGGTAAGCTAATTTGATCATGATCTACGTACTAC--------------TATTTG---ATAACACGATGTTTAATTTGT
-ACTTAC----ACCGACCTGTAGTTGGCATTGTACGCGAAGGTGCTCCAGCCGGCGGCGCTGCCGCCCCACTTGAGCACC
CGGCCATCGGAGACGCCGGTGTAGACCCCATCCTTGCCGGAGAAGGCGAGGCTCTCGGCGCCGCTGACGCCTTCGGGCAG
CGGGAGGCGGTAGCTCCACCGCGTGTTCGTCGTCTTGATCTGCTCGGCCGAGGCTAGAGAGACGAGACAGGCAAGCACGA
CGAGTAGTATCGCCGCGAGGTTGCGCCCCAT------CGTCATCGTCGTCGTCGGAGGTTC---------TGCACGGAAT
ATCGTTGCACGCACCTCCATGCCTTTTATGGGAGAGCACGCGCGACGAAACCCATGGCCACGTTTGGTGATCGGATCGGA
CACGGTCGTGATACTACACGAACTACGTCTACAACACCGTGATGTATCGCCCGCGCGTGCTGTGTTTGTAGGGAGCGCCT
ATTCGGCGCTGAAGGCGCCGCCGAAGGCAGCTGGCGCCTGCAGCAGCCCCTGCTGGGCCAGCCCACAAACGCGCACGCAG
GCAAAATTGTATTTTTACGCGAAAAGACATCCAAAAAAGAGGCTTCGCTGAGAATCGAACTCACGCCCACACACTCGTCT
TCGAGGTTGGCCAACAGGTACACCTAGTTGCTGCTAGTGAGTAATTTCAGCGTGTGTTGATTTAAGAAACAATGTAGCAG
CGCTACTTATCGTACAGCCCCTCGCTTAGATTTTGACTTATTTGAAAACATTAATGTATGAAAAAATGTGAACAAATTTG
GAAAGTTGATGAACATGCACAAAAAGGTTGGCCAATGTAAAAAAGGTTCATATATTCAAAAAAGTCCATGAATTCAAAAA
TAAAAGTTCATGAAATGGAAAAAAGTGCACTAATTTTGAAAAAACAGTTCACAACAATGAAAAACAACCATGAGTTTGAA
AAAAGTTCACGGATTTGAAAAAAGTTCATCGAATTTGAAAAAAAGTTCATTGAATTTGGAAAAAGTTCATCAACTTTTCA
AAAAAGTGCATCGGATTTGAAAAATAGTTCATCGAATCTCGAAAAATAGTTCATCGAATTTCAAAAAAGTTCATCAACTT
TTCAAAAAAGTTCACCGGATTTGCAAAATAGTTCATCAAATTTGAAATTTTTTAGCAAATTTGAAAAAGAGTTCATCGAA
TTTTTAAAAATAATATCGGATTTGAAAAAGTTCATCCAAATTCAGAAAAAGTTTGTCAATTTAGGGAAAAGGTTCACAAA
ATTTAAGAAAGCGCGCATTAAAGAAAACAAAAACAAGTAACAGAAAAGGATAAGAAAAAAGTAAAAGAAAAAAAAGAATG
GAACTAAAGAAGAAGTGAAAAAGAGTACAATAGTACAACAACTGCAGCGTAGCCTGGTGGTTTGAACGTAGGGTTCGCCT
TGGATATGTTGTGGGTTCGAATCCCCGTTTCGGGTGAGCAACTAGTTAACGAGCGCTCCTTCGGGAGCCTCACAACGATC
AGCGCCACTTGACTCGCTCTCAGCCATTCGCCACGTGTCGCGCTCTAGACGCTTCCTTCGGATTTTATTTTTTTATTTTT
TCGCACGCGTTTTTGGCTTTTTAAACGGTTTTTTCCGGGTTTTTTCGACGTTTTGGTTTTCACCCGGTCTTTCTTAGCTT
TATGATAAATAATTCAAAAAAACATTTGCGCGAAAAAAATGCGTTATTTTTCTTTCGCGAAAATCACGGTTTTTCTTTCA
CGAGAGGCACGGTTGTGCTTTAGCGAGAGTCACGCCGTGCCTTTCTTAGCTTTATGATAAATAATTCAAAAAAACATTTG
CGCGAAAAAAATGCGTTATTTTTCTTTCGCGAAAGTCACGGTTTTTCTTTCACGAGAGGCACGGTTGTGCTTTAGCGAGA
GTCACGCCGTGCCTTTCGGAAACGAAAAAAAACGTGTTTTCTCTTTTTTTCGCGAGAGTCACGGTTTTTCTTCCGCGAGA
GGCACGGTTGTACTTTCGCGAGAGTCACGGCCGTGCCTCTCGGAAAGGGAAAAACAAAACGCATTTTCTGTTTTTTTCTT
TCGTGAGAGTCACGGTTTTGCTTCCGCGAGAGACACTGTTGTGCTTTCGCGAAAGTCACGGCCGTGCCTAGGGAAAAAAA
TACGCGTTTTCCATTTTTTTTCTTTCATGAGAGTCACGGTTTTGCTTTCGCGAGAGGCACGGTTGTGCTTTCGCGAGAGT
CACGGTCGTGCCTCTTTCGGAAAGGGAAAAAAACCATGCTCCCGGTTCAGTTTTTTCGCCCGGTTTTTTTGTCCGGTTTT
TCGTGAAAAAAAGTTCGTCAAAACCTATCAACATGGGATCTAGTTTTGAAGATCTCGACGCGAGGAATCCAATGATGAAA
ACGGTTCGAGATTTGGACGCACGGTTTAAGAGATAAAACATTTTGAATTAACAGATCTACGAAAAAAGGGAAAACTCCCA
GATTGCGACAAGTGGCGCGCTGCATGGGCGCCACTTGTCGCGACCTGGGAAAGTGGAGTGTTCTTTGCAACGAGTACTCC
TTAATTAGTGATTTCGCCGTTTCGGATGTTTTTTGCGATTCTACAATAATAGGTGGGCCGGCCAGCGCGCCCGCGCTGCA
GGCGCCCGTTTGCAGAATGCACATTAACGGGCGCCTGCAGCGCCAAATAGGAAACGCCGTGTTTGTAGTCTTCTTCTTTT
CTTTTTTTAGG-----GATGCTGTGTTTTTTATTTATATTACGGCCCAACGTGGAGCCTTGGGCTGTTTTTGGAGCAAGA
TG-------------------------------ACGACCCCCTCCTCCCACCTACATACCCT------------------
------CCCCCATCCACGTCCAGAGGCGGGAGCCTCGTCTCGTTTCCCGTCATGGAGTCCATGCTCTTGAGGGCCTCCCG
TGACTTTGCTCGCGCCGCCAGCAGGATCGCGTCGGCTGGTCGGTGGGCAGCGCCAGTGACAGCGGCGATCTCAGCCCCCT
CAGATCTGAGGAGCCGCCTCTCCTTCCACAGCGGCAC------TAACATACCCAGCTCCACCAACGCACCACCCGAAGAA
ATGGCATCGCCCGCCTCCTTCACCCCCCACCCAGGTAATAACCAAATCAATATGTATTTTCCTT----------------
---------------------------------------------GTTCATGATTTCATCTAGATGTCCACACGATTTAA
CTCTAGTAGGCTAGCTACTTCACTCTACTCCTACAGGTAAGCTGTAAGCTAATGTATCATGCACTTCTGCTGCTTAATCA
ATCAAGCATACGATATATTTGTTTGGAGATTTACCAGTGCATCTTAGGTCAACATTC-TTTGTATATACTGTATTTATTA
TATAGCCTTTTGTTGTGAATGGATGGAGCGC----ATCTTTTCCAGCTCATTCATATGTTTGGAGGTTAAAATTTGTGGA
TCATGTATCACACAAGGCAAACTTCAATTTTTGACAGCTTTTCTCATGACATATAAATGACTTGCATCTGTAGGTAAGGT
GAAAATTCTGCCTTCAGACGAGGACGTTGAGTCAGAGGAAGCCCTGTGGGCCTTGTATCTGCGCTGGTGCAACACTTTGA
ACCAGAAGCGTGACCATGATGAGATGGTTCGCCGGTTTGATGTATTCAAGGACACTGTTCGGATGGTCCACCGTGTCAAC
AAGGCTAAATTGCCTTACACTCTGAAAGTAAGTAAATTCGCTGATGGGAAGCTA------TCCATGAGTCCAAAAGTGTT
TGATGAACCTGAATATTTCGCAACTCATGCAAAGGATGGT----------------------------------------
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>chr3D_3
--ACCTTCATGAGCCCCAAGTAGGCGTCGGCGATGTAGAGCTCGCCGGTCTTCCTGTTGAACCGGACACCCAGCGGCCGC
CCGCATATGCTCTCCTTTTCTTCCGACGGCACCCCAGAATCCGAGCACAAAGGAATTTTCCTACACACGTCCCACATGTC
ACACGTAAGCTAAATTTTAAATCGCGATCGAC---C--------------CACTTG---ACAACACGATTTTGAGCTTTT
-AATTACACCGACCGACCTGTAGTTGGCATTGTAGGCGAAGGTGCTCCAGCCGGCGGCGCTCCCGCCCCACCTGAGGACA
CGCCCGTCGGAGACGCCGGTGTAGATCCCGTCCTTGCCGGCGAACGCGAGGCTCTCGGCGCCGCTGACGCCGTCGGGCAG
CGGAAGACGGTAGCTCCAGCGCGTGTCCGTCGTCTTGACCTGCTGGGCCGATGCGAGGGAAACGAGGCAGGCAAGCACGA
CGAGTAC---CGCCGCCGAGTTGCGCCCCAT------CGTCGCCGTCGTCATCGTCCTCGGAAGTTTTCCTCTATGGGAA
GTCGTAGCGCGGACCTCCATGCCTTTTATGGGAGGCCACG----------------------------------------
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>chr3A_3
--ACCTTCATGAGCCCCAAGTAGGCGTCGGCGATGTAGAGCTCGCCGGTCTTCCTGTTGAACCGGACACCCAGCGGCCGC
CCGCATATGCTCTCCTTTTGTTCCGACGGCACCCCAGAATCCGAGCACAGAGGAATTTTCCTACACACGTCCCACATGCC
ACACGTAACCTAAATTTTAGATCGCGGTCGAT---C--------------CTAAGAAAAAAAACACGATTTTGAGCTTTT
-AATTAC----ACTGACCTGTAGTTGGCATTGTAAGCGAATGTGGTCCAGCCGGCGGCGCTCCCGCCCCACCTGAGAACG
CGCCCGTCGGAGACGCCGGTGTAGACCCCGTCCTTGCCGGCGAACGCGAGGCTCTCGGCGCCGCTGACGCCGTCGGGCAG
CGGCAGACGGTAGCTCCACCGCGTGTCCGTCGTCTTGACCTGCTGCGCCGACGCGAGGGAAACGAGGCAGGCAAGCACGA
CGAGCAC---CGCCGCCAAGTTGCGCCCCAT------CGTC---------ATAGTCCTCGAAAGTTTTCCTCTATGGGAA
GTCGTAGCGCTCACCTCCATGCCTTTTATGGGAGGCCACG----------------------------------------
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>chr3B_3
--ACCTTCATGAGCCCCAAGTAGGCGTCGGCGATGTAGAGCTCGCCGGTCTTCCTGTTGAACCGGACACCCAGCGGCCGC
CCGCATATGCTCTCCTTTTCTTCCGACGGCACCCCAGAATCCGAGCACAAAGGAATTTTCCTACACACGTCCCACATGTC
ACACGTAAGCTAAATTTTAAATCGCGATCGAT---CTAGTACATACGGAGTACTTG---ATAACACGATCCTGCGCTTTT
-AATTAC----ACCGACCTGTAGTTGGCATTGTAGGCGAAGGTGCTCCAGCCGGCGGCACTCCCGCCCCACCTGAGGACA
CGCCCGTCGGAGACGCCGGTGTAGACCCCGTCCTTGCCGGCGAACGCGAGGCTCTCGGCGCCGCTGACGCCGTCGGGAAG
CGGAAGACGGTAGCTCCAGCGCGTGTCCGTCGTCTTGACCTGCTGGGCCGATGCGAGGGAAACGAGGCAGGCAAGCACGA
CGAGTAC---CGCCGCCAAGTTGCGCCCCAT------CGTCGCCGTCGTCATCGTCCTCGGAAGTTTTCCTCTATGGGAA
GTCGTAGCGCGCACCTCCATGCCTTTTATGGGAGGCCGCG----------------------------------------
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>chr5B_904
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TGACTTTGCTCGCGCCGCCAGCAAGATCGCGTCGGCTGGTCGGTGGGCAGCGCCGGTGACAGCGGCTCGATCAGCCCCCT
CAGATCTGAGGAGCCGCCTCTCCTTCCACAGCGGCACCGGTGGTAACACACCCATCTCCACCGACGCACCACCGGACGAA
ATGTCGTCGCCCGCTTCCTTCACCCCCCTCCCAGGTAATAACCGAATCAATATGTATTTTCCTT----------------
---------------------------------------------GTTCAT--------CTAGATGTCCGAACGATTTAA
CTCTAGTAGCCTAGCTACTTTACTCTACTCCTACAAGTAAGCTAACCTAT-----------CACTTCTGCTGCTTAATCA
AT-AAGCATATGATATCTTTGTTTTGAGATTTACCGGTGCATCTTAAGTCAACATTTTTTTGTATGTACTGTATTTATTA
TATAGCATTTTGTTGTGAATGGATGGAGCAC----ATCTTTTCCAGCTCATTCATATGTTTGGAGGTTAAAATTTGTGGA
TCATGTATCACACAAGGCAAACTTCAATTTTTGACAGCTTTTCTCATGACATATAAATGACTTGCATCTGTAGGTAAGGT
GAAAATTCTGCCTTCAGACGAGGACGTTGAGTCAGAGGAAGCCCTGTGGGCCTTGTATCTGCGCTGGTGCAACACTTTGA
ACCAGAAGCGTGACCATGATGAGATGGTTCGCCGGTTTGATGTATTCAAGGACACTGTTCGGATGGTCCACCGTGTCAAC
AAGGCTAAATTGCCTTACACTCTGAAAGTAAGTGAATTCGCTGATGGGAAGCTACAAGAGTCCATGAGTCCAAAAGTGTT
TGATGAA---------TTCGCAACTCATGCAAAGGGTGGTGGATCTCGCCCTTTGGCAAATCGTCGGAAGGAAGGGGATC
TCATCATTGAAACTGGTGAAGATGTGCCAGAATATCCCCAAATGTACTTCAAGTTCTCTGAATCTGGAGATTCCATCATC
CCCTTGGAATGAATCAT---------------------------------------------------------------
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>chr3D_1893
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--------------------------------GCAAATTATATAAGCTTACTCTGATGTTTTGCTCATTTTAGAATATAG
GTTATGATTCTTC-TTTTTTCTCATTTTCTGTAGATAGCTAATTTACTTTGACTTTTTT-GCTCATTTTACAATAAGTGC
CA------------------------------------------------------------------------------
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--------------------------------------------------------------------TATTCTCTGA--
ATAGTTGGATGCGATAGTATGTAAAACACTGTTTTTTCATTGTCCATCAAATTTCTCACTGCTCCACCTTTGCTTGTGGC
TATTTCTGAATCTGTATGAACATTTCGAATCAATCTCAATCAAGTGGTCTACTTATATTGGTACTATGTTATTAGGTTCC
ATCAAAATTTCTTTGGAAGTGGGAATTCAGCTTTGTTTCTTAATGCCTCGTGTCATTGTGATTTGATGGTTATAAGTTAG
AGCCTGTACTGATCTCTTAGCAAT-TGCGTGACCAGATCAGTAGAGACGAGGCAGATGATGTGAGAAAGGCCATAGAGGT
TTTCGATCGATGAGATTTGTGCCAAGGATCCGAAATTCTTGTGCAGGGTCCAACCAGATTGAGAGTTGGATAAAGAATCT
CTTATGGACGACTGGTAGCAGCAGGATGCAGTACAAGTTT--TTTTTTGACACAATGATGTGCATAGAACAAATTTGTAC
GACATGTCTTTTAGGTTGTTTGTA--------------------------------------------------------
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------------------------------------------------------------------------------AG
TACTAGTATAAACAATTATTTTT--AAGTGTATG----------------------------------------------
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>chr5A_1893
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--------------------------------GCAAATTATATAAGCTTACTCTGATGTTTTGCTCATTTTAGAATAAAG
GTTATGATGCTTCTTTTTTTCTCATTTTCTGTAGATAGCT---TTACTTTGA-TTTTTT-GCTCATTTGACAATAAGTGC
CAGAATATTTTGTGAATAGTTTTTTGAAAGATCCAGCATCATTGACATTTATTGATAGCTAGCAAAGAGGCCCGTGCGTT
GTAACGGGAGAAAAAAATCCACTAATATCTCTAGCTGGGTCAATTGGTGGATTTTATGAGATCAGACCCCTCCCATTGAC
AATTTAGTTTTCTTCGGACCTGGGCCACAGTGCGCCACCAGATAGGCTTCCTCCGTTGGGCCAAAATGGGTGGCAAGTAG
CAAAACCAAATAGCGTATGTGAAATTAATTGAAACGAGACCGAATGAAGCGGGACGAAACCAAGAGTATCACCTTCCTTT
AATAGTAGGTATAGATAGCAGGAAGCAACGAAAAATAATAAGGTGATGAAGGTCCTAGACCAGAGGATCCGAAGATCAAA
GAAAAAAGAAAACATCAGTCCTAACAGTCGTACTAGGTAGCGCAGCTTCGACTCCGACGTAAAAACATTATTCTGTGAAT
ATAGTTGGATGCGATAGTATGTAAAACATTGTTTTTTCATTGTCCATCAAATTTCTCACTGCTCCACTTTTGCTTGTGGC
TATTTCTGAATCTGTATGAACATTTAGAATCAATCTCAAA----TGGTCTACTTATACTGGTACTATGTTATCAGGTTCC
ATCTTTTTTTCTTTGGAAGTGGGAATTCAACTTTGTTTTTTAATATCTCATGTCATTGTGATCTGATGGTTATAAGTTGG
AGCCTGTACTGATCTCTTAGCAACCTGTGTAGCCAGATCAGTAGAGACGAGGCAGATGACGTGAGAAAGGCCATATAGGT
TTTCGAA----GAGATTTGTGCCAAGGATCGGGAACTCTTGTGCAGGTTCCAATCAGATTGAGAGTTGGGTAAAGAATCT
GTTGTGGATGGCCG----------GATGCAGTACACGTTTTTCTTTTTGACACAATAATGTCTATAGAACAAATTTGTAC
GACATGTCTTTTAGGTTGTTTGTA--------------------------------------------------------
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------------------------------------------------------------------------------AG
TACTAGTATAAACAATCGTTTTCGAAAGTGTATAGAGTA-----------------------------------------
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>chr6A_1893
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--------------------------------GCAAATTATATAAGCTTACTCTGATGTTTTGCTCATTTTAGAATAAAG
GTTATGATGCTTC-TTTTTTCTCATTTTCTGTAGATAGCT---TTACTTTGA-TTTTTTTGCTCATTTTACAATAAGTGC
CAGAATATT-----------------------------------------------------------------------
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------------------------------------------------------CTCACTGCTCGACCTTTGCTTGTGGC
TATTTCTGA------ATGAACATTTAGAATCGATCTCAGTCAAGTGGTCTACTTATACCGGTACTATGTTATCAGGTTCC
ATCAATTTTTCTTTGGAAGTGGGAATTCAGCTTTGTTTCTTAATGCCTCATCTCACTGTGATTTGATGGTTATAAGTTGG
AGCCTGTACTGATCTCTTAGCAATCTGTGTAGCCAGATCAGTAGAGACGAGGCAGATGATGTGAGAAAGGCCATAGAGGT
TTTCGAT----GAGATTTGTGCCAAGGATCCGGAATTCTTGTGCAGGGTCCAACCAGATTGAG--TTGGGTAAAGAATCT
GTCGAGGACGGCCGGTAGCAGCAGGATGCAGTACAAGTTT--TTTTTTGACATAAGAACGTGTATAGAACAAATTTGTAC
AACATGTCTTTTAGGTATTTTTTGTGAGAAAACTTCCGATCTATTCATTAACTATCAAGATAGTACAAAGAACACTAGAA
GTAAAATTTACATCCAGGTTCGAAGGCGCGTCGTCATCATCGCCCCTTCCTCATCGGAGCCGGACAAATATTATTATAGT
AGACAGTCGAAAAGTCGTCGTGCTAAGGCCCCATAGGACCAGCGCATCAGAACAGCAACCGCCGCCGATGAAGAGAAGCA
TAAACCGGAAGGATCCAACCTGCAGACACACAAACGTAGACGAACGAAGACCGGATCCAGTCGGATCCACCGAAGGCAAA
CGCCGATCGGATCCCACGGAATCAGTCGGAGACAAACCTCCACACGCCTTCTGACGATGCTTGAAACATCACCGCGACAT
GGGCTAGACGGGGAGGACCTTATTTCATCTTCAAGAAGCCGCCGCCGCCTCGTCTTCTTGAACATGTCACAAACCCTAAC
AAAACTCAAAAAATCATCTAAAAACGAAGCCCTCCCGCTGGCAAGGACCGGGATCCATCGTGCCTCCATGGTCCAAGGAC
CATAGGAGATGAGGCGGACCGGCGGCGCCGGCGAGAGGCAAGGAAACCCTAGATGGGAGTTTCGCATGTGGGCATGAGCG
AAGGGTATAAACAATCATTTTTCAAAGTGTATAAACAATCATTTTTAAGTTGTACATACTTCCTTCGTCCGGTGAAGAGT
GTACATCTATCTTTAAAATTTGTTCATAAAAGAGTGTACTTCTATCTTCCCAATGCATTTTAAAGTGAGAAAAAATACTT
CTCTCTCGTCACACGGTAATCAAGACAAATAGCAATCTACATATGGGCTTCTTAATTTCTACAAGCACTTAGATCATTGA
GGGTTGGGTAATTAAAGAGGGAAGAAATGGTGACTTGCATCTTTCCAATGCATTTTTTTACTCAACTTCATAATTTGTTC
TAAAATTTCTAAATATACACTCTTCAACAGACGGAAGGAGTATGTACACTATCACCGTATTTTAGGTTGTTTGTAAGTAG
TACTAGTATAAACAATCATTTTTCAAAGTGTATGGAGTA-----------------------------------------
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>SNPs
----------------------------------------------S--------S--------------------S---
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--------S------------S-S--------------------------------------------------------
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-----------------------------------------------------S--------S-----------------
---S---------------------------SSSSSS--------------------------------S----------
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-------------------------------------------S-----------------SS--SS--SS-S-S-SS-S
SSS--S--------------------------------------------------------------------------
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---------------------------------------------------------S--------S-------------
-----S--SSSSSSSS---------------------------------------S---------------S-------S
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-S---SS-SSSSSSSSSSSSSSSSSSS
SSSSSS--S--------S-----SS--SS-----SSSSSS----------------------------------------
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-----------------S-S------------------------S---------------S------------S------
-------------------------S--------------------------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
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----------------------------S--SSSS---------------------------------------------
-----------------------------------------------------------------------------S--
-------------------S-------------S----------------------------------------------
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------------------------------------------------------S-------S-----------------
---------------------------S------------S------------------------------------S--
--------------------------------------------S-----------------------------------
-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S---------------------------
-------------------------------------S------------------------------------------
---------S----------------------------------------------------------------------
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-----------S---------------S-----------S----------------S-----------------------
---------S--------------------------------------------------------S-------------
------------------------------S-------------------------S-S----------------S----
----------------------------------------------SS--------------------------------
--------------------------------------------------------------------------S-----
-----------------------------S----------S---------------------------------------
SS----------------S---S---------------------------------------------------------
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----------------------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_463
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-------------------------------------------TCGGCCGAGGATAGAGAGAG-----------------
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>reverse_4306
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-----------------------------------------------------------------TGTATCCGGCCTTGC
TTCTG---------------------------------------------------------------------------
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------------------------
