>input_sequence_68734
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----------------------------CTTTTAATTCCCTCTCATTATTATCTGTCTCACATTGTTTGCTAGCTACTCC
TACTTGCGACGACTCCAAAACCTCGGCACCAAGGAAAAGGAAAA------GTCGCCGTCCTCGACCGGTCCGATGGAGTC
CGAGAAGGCATCGCGGCCGGCGTCGCTCCTCGGGACGCTGCGGACGGCGGTGAAGAAGGTCCGGTTCCTGCTCTCCTTCA
GCGCCACGCGGTGGATCATCAACTCCATCGCCGGCCGCCGGAGCGCGCCCAGCGCGACGGCGCCGCTCCGCCTCAGCTTC
GGCTCCAGGCGGCCGGGCCTGCTCGACGCGGAGGACGGGAGCA---GCTCCCCCGCGTCCACCGCCGGGCCGACGAGGAC
GGTGAGCCTCGGGTCGGGCGGCGTGTCGCGGACGAGCAGCGCGGTGGCGGCGTCGGAGTACTCCAGGTCCGCGTCGTCGG
GCGCGACGTCGTCGTCGAGCGGGGGGTCGTCGCCGGCGGGGGACGACGACATCGACCGGCGCGCGGAGCAGTTCATCGCC
AACTTCTACAAGCACATCCAGATGGAGCGGCAGGTGTCCCTGCAGCTGCGGTACTGCCGGGTCGACAGCCTGCAGGAGAG
GTCGCCTCCCCGCAGGGTTTCTTGACCGATTTGATCCCCGG-ATATGCATTGCGATTCTTG-TTAATTTCGAGTGAAAAC
AGGTGTGTGTATGTGGATTTAGATGGGTGTTTTTTCGTTCCATCATTTCTGCGCGTCGTC---TAGGATTAATTTG----
------TTCTGTAAGATTGAGATCACAGAGTGCGAGTAGTACAA------------------------------------
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---------------------------------------
>chr1D_1_TraesCS1D01G296700
CTCTTGCCTCGTAAAATAGTATGGCTGCAGCTAACAGCGTCTTATTTGTGCACAACAGGTCGGAGCCGGTTTACACGAGA
CGAGGTAAGCGACAA----ATCAACCAAACGCGTTTGTCCTTTGTACTGACGTGGACTAGTGG-CCGTCGTCGTCACTCC
GGGCTCGCACGAGCTACCGCGTCGTCGCCACACCACGGCTCCGCAGCCTTCCCGCCGAAGCATCTTCTATCTAGACAACG
GGCCGGACAAGGTGGCGCGGTGGCGCAGAAGCGGAGCGGCAATG------TTTGACCTGACCTGATCCCCTCCTCCTCCA
GCGCACGCCTCGTCTGTCGTCCGTCGTGCGAGGTTCATTCCAAGTTTCCAACACAACCTTGCGCTCACGCGAGAGTAACA
TG---------------------GCCG-------GGAGGCCGACACGACAGCAAAGCGCCAACTGGCCCACCGGCCCCAC
GAGCGCGTTTGGACCAGGACCCCGTCGCCAGAGGCCCAGAATACCAGTAGTGCACGTAAAAAACTGCCGCCGTTCCTTCT
TGATGTCAGCAATGATTGCCAT---GTAGGAGTACATGTTGCTCTCCATGCAAAAAAAAAGGAAAATAT-------GTAC
ATGTTGCTCGGTCATACGACCTTTGA-------ATACGCGTTAATTAACGGCCGGAGAGCATGCATCTACCGGTC-----
-TACGTGTATGCATGTAGAGATGTACTCCCTCCGTTCTTAAATATAAATCTTTGTAGAGATTCCACTAGATGGACTACAT
ACAAAGCAAAATAAATAAATCTAAACTTAAAATGCATCTATATACATCCGTATGCAGTTTATAGTGGAATCTCTACAAAG
ACTTACATTTAGGAACGAAGGGAGTATTTCGCAAAATAAAGAAAAAAAATATGC----TCTGTATGTGCGTACATTCCTT
GAAATTTCTTAAAGCCGAGTAGCTTGCCGCACTGACCAAC-GTGCGTGGGCGACATTTCCACGTCCGCCAGCTATATATA
CAGCCCACA-GAACCTCTCGCCCTCTCACTTTTAATTCCCTCTCATTATTATCTGTCTCACATTGTTTGCTAGCTACTCC
TACTTGCGACGACTCCAAAACCTCGGCACCAAGGAAAAGGAAAA------GTCGCCGTCCTCGACCGGTCCGATGGAGTC
CGAGAAGGCATCGCGGCCGGCGTCGCTCCTCGGGACGCTGCGGACGGCGGTGAAGAAGGTCCGGTTCCTGCTCTCCTTCA
GCGCCACGCGGTGGATCATCAACTCCATCGCCGGCCGCCGGAGCGCGCCCAGCGCGACGGCGCCGCTCCGCCTCAGCTTC
GGCTCCAGGCGGCCGGGCCTGCTCGACGCGGAGGACGGGAGCA---GCTCCCCCGCGTCCACCGCCGGGCCGACGAGGAC
GGTGAGCCTCGGGTCGGGCGGCGTGTCGCGGACGAGCAGCGCGGTGGCGGCGTCGGAGTACTCCAGGTCCGCGTCGTCGG
GCGCGACGTCGTCGTCGAGCGGGGGGTCGTCGCCGGCGGGGGACGACGACATCGACCGGCGCGCGGAGCAGTTCATCGCC
AACTTCTACAAGCACATCCAGATGGAGCGGCAGGTGTCCCTGCAGCTGCGGTACTGCCGGGTCGACAGCCTGCAGGAGAG
GTCGCCTCCCCGCAGGGTTTCTTGACCGATTTGATCCCCGG-ATATGCATTGCGATTCTTG-TTAATTTCGAGTGAAAAC
AGGTGTGTGTATGTGGATTTAGATGGGTGTTTTTTCGTTCCATCATTTCTGCGCGTCGTC---TAGGATTAATTTG----
------TTCTGTAAGATTGAGATCACAGAGTGCGAGTAGTACAAATAAATAGAGTTCTTTGAGAACTTGGGGGAGGCT-G
AGTATTCTCCTCAACATTGAGAAATATCTTTGTATGTGCATCACTCATTGAAAG---TGAGGAGAATAGGCTGAATAGCA
GGCTAGCCTAGCCAGAATCAATTAATCAAGAATCTACGGTTGGTACTATCTCCTTGTAGGTCTAAAATATTCGATTTCAC
ATGGGCAGCCGGAACCAATGAATCAAGTATTTCCTTATAGGTCTGGCATATTCAATTTCACATGGGCAACATCTACTCTA
TATTGGAATTTTGCTAGTAGGCCTTTGACCCAAAGCCCAACTAAAATTCTGAAATTCTGTTGGCCCATTCATGCGCACAT
GTGAGTGGAGTGAGTGAGGCTAAAGTTTAGTCCCACCTTATAAGTTGAGAGAGAGTTGCACCTCTTTATAAGGTGAGCTC
TTCTACCACTTGTATGAGCATGACAAGAGGAGACCTATACGCGCGC-TCCTCCT------C-----CTCGTCACGAC---
--GCGTCG---CGGGTTGCGGGATTGAGTCGAGCCGAGGACAGAGCTATGCACGTTGTCTATATTTTT-GCTGCTCGGGA
AA-AATTAATGAGTCATTAATTAATAATTAACGGACGCGTTAATTACTGAACCGTTTCCGATTCTTTTGGATCGTGACAA
CTCGGACGTGGGGTTTACTCCCACGACCTGCCCGGCCCGCACTATATAGTCAGGCAGACGTCTACCCTAGC---CGCCGC
CGCTTCGTATGGTTTCTCACCACCGTTCCAGATC------ATTGCGCCGCCAAGCAAGTCTTCTCCATCCCTCCTTTCGG
CATGCACCGGCAGAAGGGACAGCAGGCCTCCGGAACCCCGCCTCTCGTGATCCTGTACAGGAGAGGGGCGATCAGGTTTT
TGGGGAGCGCACTCGCGCGACTGCTGGCAGCGACGACTTCGCGAACGACGACTTCTTCCTCGACCTCGGCAACCTCATCC
TCGACGACATGGGCGACAACGTCAACGCCGGCGGTGCTG
>chr1A_12
-----------TAAAATAGTACGGCTGCAGCTAACGGCGTCTTATTTGCGCA-AACAGGTCGGAGCCGGTTTACACGAGG
CGCGATAAGCGACAG----ATCAACCAAACGCGTTTGTCCTTTGTACTGACGTGGACTAGTGG-CCGTCGTCGTCACTCC
GGGCTCGCACGAGCCACCGCGTCGTCGCCACACCACGGCTCCGCAGCCTTGCCGCCGAAGCATCTTCTGTCGAGACAACG
GGCCGGGCAAGGTGGCGCGGTGGCGCGGAAGCGGAGCGGCAATG------TTTGACCTGACCCGATCCCG---TCCTCCA
GCGCACGCCTCCTCTGTCGCCCGTCGTGCGAGGTCCATTCCACCTTGCGTT-----------------------GTAACA
TG---------------------GCGGCATGGCCGGGGGGCGACACGACAGCAAGGCGCCAACTGGCTCACGGGCCCCAC
GAGCGCGTTTGGACCAGGACCCCGTCGCCAGAGGCCCAGAATACCAGTAGTGCACGTAAAATACTGCCGCCGTTCCTTCT
TGATGTCAGCAATGATTGCCATGTAGTAGGAGTACATGTTGCTCTCCATGCAAAAATAAAAACAAAATAAAAAATCGTAC
ATGTTGCTCGGTCATACGACCTT-GTAGGGAGTATAAGCGTTAATTAA-GGCCGGAGTGCATGCATCTACCGATC-----
-CACGTGTATGCATGTAGAGACGGTATGCTCTGTA-------C-------------------------------------
--------------------------------------------------------------------------------
-----------------------GTATTTCGCAAAAA------AAAAAATGCTCTGTATCTGTATGTGCGTGCATTCCTC
GAAATATCTTAATTCCGAGTAGCTTGCCGCACTGAGCAAC-GTACGTGGGCGACATTTCCACGTCCGCCAGCTATATATA
CAGCCCACAGGAACCTCTCGCCCTCTCACTTTTAATCCCGTCTCATCAT---CTGTCTCCCGTTGTTTGCTAGCC-----
-ACTTGCGACGACTCCAAAACCTCGCCACCAAGGAAAAAGAGAAGTCGCCGTCGCCGTCCTCGACCGATCCGATGGAGTC
CGAGAAGGCGTCGCGGCCGGCGTCGCTCCTGGGGACGCTCCGGACGGCGGTGAAGAAGGTGCGGTTCCTGCTCTCCTTCA
GCGCCACGCGGTGGATCATCAACTCCATCGCCGGCCGCCGGAGCGCGCCCGGCGCGACGGCGCCGCTCCGCCTCAGCTTC
GGGTCCAGGCGGCCGGGCCTGCTCGACGCGGAGGACGACGACGACGGCTCCCCCGCGTCCACCACCGGGCCGTCCAGGAC
GGTGAGCCTCGGGTCGGGCGGCGTGTCGCGGACGAGCAGCGCGGTGGCGGCGTCGGAGTACTCGCGGTCCGCGTCGTCGG
GCGCGACGTCGTCGTCGAGCGGGGGGTCGTCGCCGGCCGGGGACGACGACATCGACCGGCGCGCGGAGCAGTTCATCGCC
AACTTCTACAAGCACATCCAGATGGAGCGGCAGGTGTCGCTGCAGCTGCGGTACTGCCGGGTCGACAGCCTGCAGGAGAG
GTCGCCTACCCGCAGGGTTTCTTGACCGATTTGATCCCCCGTATATGCATTGCGATTCTTG-TTCATTTCGTGTCAAAAC
AGGTGTGTGTATGTGGATTTAGATGGGTGTTTTTTCGTTCCATCATTTCTGCGCGTCTTC---TAGGATATTAATTTGTT
CTGTATTTCTGTAAGATCGAGATTACAGAGTGCGAGTAG---AAATAAACAGAGTTCTTTGAGAACTTGGGGGAGAATCG
AGTACTCTCCTCAACATTGAAAAATATCTTAGTATGTACTACATCATTCACAAAATCTGAGGAGAATAGGCTGAATAGCA
GGC-----------------------------------------------------------------------------
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---------------------------------------
>chr1B_31
------------------------------CTAACGGCGTCTTCTTTGTGCA-AACAGGTCGGAGCCGGTTTACACGAGA
CGAGATATGCCACAAATCGATCAATCAAACGCGTTTGTACTTTGTACAGGCGTGGACTAGTGACCCGTCATCGTCACTCC
GGGCTCGCACGAGCCACCGCGTCG---------------TCCGCAGCCTTGCCGCCGAAGCATCTTCTGTCGAGACAACG
GGCCGGACAAGACAA---GGTGGCGCGGAAGCGGAGCGGCAATCTTTGAATTTGACCTGACCCGATCCCCGCCTCCTCCA
GCGCACGCCTCGTCTGTCGCCCGTCGTGCGAGGTCCATTCCA----------ACAACCTTGCGCTCACGCGAGAGTAACA
TGAGTACATGACATGGCGGCATGGCCG-------GGAGGCCGACACGACAGCAAGGCGCCAACTGGCTCACGGGCCCCAC
TAGCTCGTTCGGACCAGGACCCCGTCGCCAGAGACTCAGAATACCAGTAGTGCACGTAAAATACTGCCGCCGTTCCTTCT
TGCTGTCAGCAATGATTGCCAT---GTAGGAGTACATGTTGCTCTCCATGCAAAAAATATACTAC-TAT-------GTAC
ATGTTGCTCGGTCATACGACCTT-GA-------ATACGCGTCAATTAACGGCCGGAGTGCATGCATCTACCGATCTACTC
CTACGTGTATGCATGTAGAGATGGTATGCTCTGTATGTGCTAC-------------------------------------
--------------------------------------------------------------------------------
-----------------------GTATTTCGCAAAAG------AAAAAAAATGC----TCTGTGTGTGCGTACATTCCTC
GAAATTTCTTAAAGCCGAGTAGCTTGCCGCACTGACTAACCGTACGTGGGCGACATTTCCACGTCTGCCCGCTATATATA
CGGCCCACAGAAACCTCTCGCCCTCTCACTTTTAATCCCGTCTCATTAT---CTGTCTCGCGCTGTTTGCTAGCC-----
-ACTTGCGACGACTCCAAAACCTCGGCACCAAGGAAAA-GAGAAGTCGCCGTCGCCGTCCTCGACCGATCCGATGGAGTC
CGAGAAGGCATCGCGGCCGGCGTCGCTCCTCGGGACGCTGCGGACGGCGGTGAAGAAGGTGCGGTTCCTCCTCTCCTTCA
GCGCCACGCGCTGGATCATCAACTCCATCGCCGGCCGCCGGAGCGCGCCCGGCGCGACGGCGCCGCTCCGCCTCAGCTTC
GGCTCGAGGCGGCCGGGCCTGCTCGACGCGGAGGACGACGACG---GCTCCCCCGCGTCCACCGCCGGGCCGGCCAGGAC
GGCGAGCCTCGGGTCGGGCGGCGTGTCGCGGACGAGCAGCGCGGTGGCGGCGTCGGAGTACTCGAGGTCCGCTTCGTCGG
GCGCGACGTCCTCGTCGAGCGGGGGGTCGTCGCCGGCGGGGGACGACGACATCGACCGGCGCGCGGAGCTGTTCATCGCC
AACTTCTACAAGCACATCCAGATGGAGCGGCAGGTGTCGCTGCAGCTGCGCTACTGCAGGGTCGACAGCCTGCAGGAGAG
GTCGCCTCCCCGCAGGGTTTCTTGACCGATTTGGTCCCCGG-ATATGCGTTGCGATTCTTGTTTAATTTCGTGTGAGAAC
AGGTGTGTGTATGTGGATTTAGATGGGTGTTTTTTTGTTCCATCATTTCTGCGCGTCGTCCTCTAGGATTAATTTG----
------CTCTGTAAGATCGAGATTACAGAGTGCGAGTAGTACAAATAAACAGAGTTCTTTGAGAACTTGGGGGAGACT-G
AGTATTCTCCTCAACATTGAGAAATATCTTTGTATGTGCATCACCCATTGAAAG---TGAGGAGAATAGGCTGAATAGCA
GGCTAGCCTAGCCAGAATCAATTAATCAAGAATCCACGGTTGGTACTATCTCCTTGTAGGTCTACAATATTCGATGTCAC
ATGGGCAGCCGGAACCAATGAATCAAGTATTTCCTTATATGTCCGGCATATTCAATTTCATATGGGACTACTCTA-----
--------------------------------------------------------------------------------
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---------------------------------------
>chr1B_2067
TTGGAA--------------------------------------------------------------------------
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---------TTTGCTAGTGGGCTTTTGGCCCAAAGCCCAACTAAAATTCTGAAATTCTCTTGGCCCATTCATGCACACAT
GTGAGTGGAGTGAGTGAGGCTAAAGTTTAGTCCCACCTCATAAGTTGAGAGAGAGTTGCACCTCTTTATAAGGTGAGCTC
TTCTACCACTTGTATGAGCATGAGAAGAGGAGACCTACACGCGCGCCTCCTCCTCGCTCGC-----CTCGTCACGAC---
--GCGCCG---CAGGTTGCGGGATTGAGCCGAGCCGAGGACAGAGCTATGCACGTTGTCTATATTTTT-GCTGCTCGGGA
AA-AATTAATGAGTCATTAATTAATAGTTAACGGACGTGTTAATTACTGAACCGTTTCCGATTCTTTTGGATCGTGACGA
CTCGGACGTGGGGTTTACTCCCACGACCTACCCGGCCCGCACTATATAGTCAGGCAGACGTCTACCCTAGC---CGCTGC
CGCTTCATATGGTTTCTCACCACCGTTCCAGATC------ATTGTGCCGCCAAGCAAGTCTTATCCATCCCTCCTTTCGG
CATGCACCGGGAGAAGAGACAGCAGGCCTCCGGAACCCCGCCTCTCGTGATCCTGTACGGGAGAGGGGCGATCAGGTTTT
TGGGGAGGGCACTCGCGCGACTCCTGGCAGCGACGACTTCGCGAACGACGACTTCTTCCCCGACCTCGGCAACGTCATCC
TCGACGACATGGGCGACAACGTCAACGCCGGCGGTGCTG
>chr7D_2067
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--TTGGAATTTTGCTAGTAGGCCTTTGGCCCAAAGCCCAACTAAAATTCTGAAATTCTCTTGGCCCATTCATTCACACAT
GTGAGTGGAGTGAGTGAGGCTAAAGTTTAGTCCCACCTTATAAGTTGAGAGAGAGTTGCACCTCTTTATAAGGTGAGCTC
TTCTACCACTTGTATGAGCATGACAAGAGGAGACCTACACGCGCGC-TCCTCCTCCA-CGC-----CTCGTCACGAC---
--GCGCCG---CGGGTTGCGGGATTGAGCCAAGCCGAGGACAGAGCTATGCACGTTGTCTATATTTTTTGCTGCTCGGGA
AA-AATTAATGAGTCATTAATTAATAATTAACGAACGCGTTAATTACTGAACCGTTTCCGATTTTTTTGGATCGTGACGA
CTCGGACGTGGGGTTTACTCCCACGACCAGCCCGGCCCGCACTATATAGTCAGGCAGACGTCTACCCTAGC---CGCCGC
CGCTTCGTATGGTTTCTCACCACCGTTCCAGATC------ATTGCGCCGCCAAGCAAGTCTTCTCCATCCCTCCTTTCGG
CGTGCACCGGCAGAAGGGACAGCAGGCCTCCGGAACCCCGCCTCTCGTGATCCTGTACGGGAGAGGGGTGATCAGGTTTT
TGGGGAGCGCACTCGCGCGACTGCTGGCAGTGACGACTTCGCGAACGACTTCTT----CCCGACCTCGGCAACCTCATCC
TCGACGACATGGGCGACAACGTCAACGCCGGCGGTGCTG
>chr7D_2067
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--TTGGAATTTTGCTAGTAGGCCTTTGGCCCAAAGCCCAACTAAAATTCTGAAATTCTCTTGGCCCATTCATGCACATAT
GTGAGTGGAGTGAGTGAGGCTAAAGTTTAGTCCCACCTCATAAGTTGAGAGAGAGTTGCACCTCTTTATAAGGTGAGCTC
TTTTACCACTTGTATGAGCATGACAAGGGGAGACCTACACGCGCGC-TCCTCCTCCA-CGC-----CTCGTCACGAC---
--GCGCCG---CGGGTTGCGGGATTGAGCCGAGCCGAGGACAGAGCTATGCACGTTGTCTATATTTTT-GCTGCTCGGGA
AA-AATTAATGAGTCATTAATTAATAATTAACGGACGCGTTAATTACTGAACCGTTTTCGATTTTTTTGGATCGTGACGA
CTCGGACGTGGGGTTTACTCCCACGACCTGCCTGGTCCGCACTATATAGTCAGGCAGACGTCTACCCTAGC---CGCCGC
TGCTTCGTATGGTTTCTCACCACCGTTCCAGATC------ATTGCGCCGCCAAGCAAGTCTTCTCCATCCCTCCTTTTGG
CGTGCACCGGCAAAAGGGACAGCAGGCCTCCGGAACCCCGCCTCTCGTGATCCTGTACGGGAGAGGGGCGATCAGGTTTT
TGGGGAGCGCACTCGCGCGACTGCTGGCAGCGACAACTTCGCGAACGACGACTTCTTCCCCGACCTCGGCAACCTCATCC
TCGACGACATGGGCGACAACGTCAACGCCGGCGGTGCTG
>chr7D_2067
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--TTGGAATTTTGCTAGTAGGCCTTTGGCCCAAAGCCCAACTAAAATTCTGAAATTCTCTTGGCCCATTCATGCATACAT
GTGAGTGGAGTGAGTGAGGCTAAAGTTTAGTCCCACCTCATAAGTTGAGAGAGAGTTGCACCTCTTTATAAGGTGAGCTC
TTCTACCACTTGTATGAGCATGACAAGAGGAGACCTACACGCGCGC-TCCTCCTCGCTCGC-----CCCGCCGCGCC---
--GCGCCG---CGGGTTGCGGAATTGAGCCGAGCCGAGGACAGAGCTATGCACGTTGTCTATATTTTT-GCTACTCGGGA
AAAAATTAATGAGTCATTAATTAGTAATTAACGGACGCGTTAATTGCTGAACCGTTTCCGATTCTTTTGGATCGTGACGA
CTCGGACGTGGGGTTTACTCCCACGACCTGCCCGGCCCGCACTATATAGTCAGGCAGACGTCTATCCTAGCCGCCGCCGC
CGCTTCGTATGGTTTCTCACCACCGTTCCAGATC------ATTGCGCCGCCAAGCAAGTCTTCTCCATCCCTCCTTTCGG
CGTGCACCGGCAGAAGGGACAGCAGGCCTCCGGAACCCCGCCTCTCGTGATCCTGTACGGGAGAGGGGCGATCAGGTTTT
TGGGGAGCGCACTCGCGCGACTGCTGGCAGCGACGACTTCGCGAATGACGACTTCTTCCCCGACCTCGGCAACCTCATCC
TCGACGACATGGGCGACAACGTCAACGCCGGCGGTGCTG
>chr7D_2067
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--TTGGAATTTTGCTAATAGGCCTTTGGCCCAAAGCCCAACTAAAATTCTGAAATTCTCTTGGCCCATTTATGCACACAA
GTGAGTGGAGTGAGTGAGGCTAAAGTTTAGTCCCACCTTATAAGTTGAGAGAGAGTTGCACCTCTTTATAAGGTGAGCTC
TTCTACCACTTGTATGAGCATGACAAGAGGAGACCTACACGCGCGC-TCCTCCTCCT-CGCT-----------CGCC---
--GCGCCG---CGGGTTGCGGGATTGAGCCGAGCCGAGGACAGAGCTATGCACGTTGTCTATATTTTT-GCTGTTCGGGA
AA-AATTAATGAGTCATTAATTAATAATTAACGGACGTGTTAATTACTGAACCGTTTCCGATTTTTTTGGATCGTGACGA
CTCCGACGTGGGGTTTACTCCCACGACCTGCCCGGCCCGCACTATATAGTCAGGCAGACGTCTACCCTAGC---CGCCGC
CGCTTCGTATGGTTTCTCACCACCGTTCCAGATCCAGATCATTGCGCCGCCAAGCAAGTCTTCTCCATCCCTCTTTTCGG
CGTGCATCGGCAGAAGGGACAGCAGGCCTCTGGAACCCCACCTCTCGTGATCCTGTACGGGAGAGGGGCGATCAGGTTTT
T-GGGAGCGCACTCGGGCGACTGCTGGCAGCGACGACTTCGCGAACGACGACTTCTTCCCCGACCTCGGCAACCTCATCC
TCGACGACATGGGCGACAACGTCAACACCGACGGTGCTG
>chr2D_2067
--------------------------------------------------------------------------------
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--TTGGAATTTTGCTAGTAGGCCTTTGGCCCAAAGCCCAACTAAAATTCTGAAATTCTCTTGGCCCATTCATGCACACAT
GTGAGTGGAGTGAGTGAGGCTAAAGTTTAGTCCCACCTCATAAGTTGAGAGAGAGTTGCACCTCTTTATAAGGTGAGCTC
TTCTACCACTTGTATGAGCATGACAAGAGGAGACCTACACGTGCGC-TCCTCCTCCT-CGCCACGCCTCGTCACGAC---
--GCGCCG---CGGGTTGTGGGATTGAGCCGAGCCGAGGACAGAGCTATGCACGTTGTCTACATTTTT-GCTGCTCGGGA
AA-AATTAATGAGTCATTAATTAATAATTAACGGACGCGTTAATTACTGAACCGTTTCCGATTCTTTTGGATCGTGACGA
CTCAGACGTGGGGTTTACTCCCACGACCTGCCCGGCCCGCACTATATAGTCAGGCAGACGTCTACCCTAGC---CGCCGC
CGCTTCGTATGGTTTCTCACCACCGTTCCAGAT------CATTGCGCCGCCAAGCAAGTCTTCTCCATCCCTCCTTTCGG
CGTGCACCGGCAGAAGGGACAGCAGGCCTCCGGAACCCCGCCTCTCGTGATCCTGTACGGGAGAGGGGCGATCAGGTTTT
TGGGGAGCGCACTCGCGCGACTGCTGGCAGCGACGACTTCGCAAACGATGACTTCTTCCCCGACCTCGGCAACCTCATCC
TCGACGACATGGGCGACAACGTCAACGCCAGCGGTGCTG
>chr5D_2067
TTGGAA--------------------------------------------------------------------------
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---------TTTGCTAGTAGGCCTTTGGCCCAAAGCCCAAATAAAATTCTGAAATTCTCTTGGCCCATTCATGCACACAT
GTGAGTGGAGTGAGTGAGGCTAAAGTTTAGTCCCACCTCATAAGTTGAGAGAGAGTTGCACCTCTTTATAAGGTGAGCTG
TTCTACCACTTGTATGAGCATGAGAAGAGGAGACCTACACGCGCGC-TCCTCCTCCT-CGCT-----------CGCCGCG
CCGCGCCG---CGGGATGCGGGATTGAGCCGAGCCGAGGACAGAGCTATGCACGTTGTCTATATTTTT-GCTGCTCGGGA
AA-AATTAATGAGTCATTAATTAATAATTAACGGACGCGTTAATTACTGAACCGTTTCCGATTCTTTTGGATCGTGACGA
CTCGGACGTGGGGTTTACTCCCACGACCTACCCGGCCCGCACTATATAGTCAGGCAGACGTCTACCCTAGC---TGCCGC
CGCTTCGTATGGTTTCTCACCACCGTTCCAGAT------CATTGCGCCGCCAAGCAAGTCTTCTCCATCCCTCCTTTCGG
CGTGCACCGGGAGAAGGGACAGCAGGCCTCCGGAACCCCGCCACTCATGATCCTGTACTTGAGAGGGGCGATCAGGTTTT
TGGGTAGCCCACTCGCGCGACTGCTGGCAGCGACGACTTCGCGAACGACGACTTCTTCCCCGACCTCGGTAACCTCATCC
TCGACGACATGGGTGACAACGTCAACGCCGGCGGTGCTG
>chr5D_2067
TTGGAA--------------------------------------------------------------------------
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---------TTTGCTAGTGGGCTTTTGGCCCAAAGCCCAACTAAAATTCTGAAATTCTCTTGGCCCATTCATGCACACAT
GTGAGTGGAGTGAGTGAGGCTAAAGTTTAGTCCCACCTCATAAGTTGAGAGAGAGTTGCACCTCTTTATAAGGTGAGCTC
TTCTACC-CTTGTATGAGCATGAGAAGAGGAGACCTACACGCGCGC-TCCTCCTCCT-CGCT-----------CGCCACG
CCTCGTCACGACGGGTTGCGGGA-TGAGCCGAGCCGAGGACAGAGCTATGCACGTTGTCTATATTTTT-GCTGCTCGGAA
AA-AATTCATGAGTCATTAATTAATAATTAACGGACGCGTTAATTACTGAACCGTTTCCGATTTTTTTGGATCGTGACGA
CTCGAACGTGGGGTTTACTCCCACGACCTACCCGGCCCGCACTATATAGTCAGGCAGACGTCTACCCTAGC---CGCCGC
CGCTTTGTATGGTTTCTCACCAACGTTCTAGAT------CATTGCGCCGCCAAGCAAGTCTTCTCCATCCCTCCTTTCGG
CGTGCACCGGGAGAAGGGACAGCAGGCCTCCGGAACCCCGCCTCTCGTGATCCTGTACGGGAGAGGGGCGATCAGGTTTT
TGAGGAGCGCACTCGCGCGACTGCTGGCAGCGACGACTTCGCGAACGACGACTTCTTCCCCGACCTCGGCAACCTCATCC
TCGACGACATGGGCGACAACGTCAACGCCGGCGGTGCTG
>chr3A_2067
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--TTGAAATTTTGCTAGTAGGCCTTTGGCCCAAAGCCCAACTAAAATTCTAAAATTCTCTTGACCCATTTATGCACACAT
GTGAGTGGACTGAGTGAGGCTAAAGTTTAGTCCCACCTCATAAGTTGATAGAGAGCTGCACCTCTTTATAAGGTGAGCTC
TTCTACCACTTGTATGAGCATGAGAAGAGAAGACCTACACGCGCGC-TCCTCCTCCT-CGCA----------------CG
CCGCGCCG---CGGGTTGCGGGATTGAGCCGAGCCGAGGACAGAGCTATGCACGTTGTCTATATTTTT-GCTGCTCAGGA
AA-AATTAATGAGTCACTAATTAATAATTAATGTACGCATTAATTACTGAACAGTTTCCGATTCTTTTGGATCGTGACGA
CTCGGACGTGGGGTTTACTCCCACGACCTACCCGACCCGCACTATATAGTCAGGCAGACGTCTACCCTAGC---CGCCGC
CGCTTCGTATGGTTTCTCACCACCGTTCCAGAT------CATTGCGCCGCCAAGCAAGTCTTCTCCATCCCTCCGTTCGG
CGTGCACCGGGAGAAGGGACAGCAGGCCTCCGGAACCCCGCCTCTCGTGATCCTGTACGGGAGAGGGGCGATCAGGTTTT
TGGGGAGCGCACTCGCGCGACTGCTGGCAGCGACGACTTCGCGAACGACGACTTCTTCCCCGACCTCGGCAACCTCATCC
TCGACGACATGGGCGACAACGTCAACGCCGGCGGTGCTG
>SNPs
S-SSSSSSSSS----------S-------------S----------------S---------------------------
----S---------------------------------------------------------------------------
--------------S-----------------------------------S-----------------S--S--------
--------------------------S-----------------------------------S-------S---------
-------------------S--------------S-------SS--S-SSSS----------------------------
------------------------------------------------------S------------S---S--------
-------------------------------------------------------------S------------------
------------------------------------------------------------SSS-----------------
-----------------------S---------------------------------S--------------S-------
-----------------------SSS-S-SSSSSS-S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS-------------SSSSSSS------------------------------------S
-------------------------------------------S------------------------------------
------------------------------------S--S---------SSS-------S-S------------SSSSSS
S-------------------------------------S--S-------------------------S------------
------------------------------------------------------------S-------------------
--------------------------------------------------S-----------------------------
-------------------------------------SSSS-S-----------------------------S-S-----
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
-----------------S-----S-------------------------S-------------------------S----
--------------------------------------------S-----------------------------------
----------------------------------S-----------------------------S----------S----
---------------------------------------S---S----------------S-----SSSSS----SSSSS
SS-------------------------S------------------------------S---------------S-----
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
----------------------------S---------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-----------------------------------------------------------S--------------------
---------------------------------------
>forward_363
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TCGTGCGAGGTTCATTCCAA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>reverse_1261
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CCGGTTCCTGCTCTCCTTC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>forward_1162
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TCGGCACCAAGGAAAAGGAA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>reverse_2559
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AA
CTCGGACGTGGGGTTTAC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
