>input_sequence_68731
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-----CTTTTAATCCCGTCTCATTAT---CTGTCTCGCGCTGTTTGCTAGCC------ACTTGCGACGACTCCAAAACCT
CGGCACCAAGGAAAA-GAGAAGTCGCCGTCGCCGTCCTCGACCGATCCGATGGAGTCCGAGAAGGCATCGCGGCCGGCGT
CGCTCCTCGGGACGCTGCGGACGGCGGTGAAGAAGGTGCGGTTCCTCCTCTCCTTCAGCGCCACGCGCTGGATCATCAAC
TCCATCGCCGGCCGCCGGAGCGCGCCCGGCGCGACGGCGCCGCTCCGCCTCAGCTTCGGCTCGAGGCGGCCGGGCCTGCT
CGACGCGGAGGACGACGACG---GCTCCCCCGCGTCCACCGCCGGGCCGGCCAGGACGGCGAGCCTCGGGTCGGGCGGCG
TGTCGCGGACGAGCAGCGCGGTGGCGGCGTCGGAGTACTCGAGGTCCGCTTCGTCGGGCGCGACGTCCTCGTCGAGCGGG
GGGTCGTCGCCGGCGGGGGACGACGACATCGACCGGCGCGCGGAGCTGTTCATCGCCAACTTCTACAAGCACATCCAGAT
GGAGCGGCAGGTGTCGCTGCAGCTGCGCTACTGCAGGGTCGACAGCCTGCAGGAGAGGTCGCCTCCCCGCAGGGTTTCTT
GACCGATTTGGTCCCCGG-ATATGCGTTGCGATTCTTGTTTAATTTCGTGTGAGAACAGGTGTGTGTATGTGGATTTAGA
TGGGTGTTTTTTTGTTCCATCATTTCTGCGCGTCGTCCTCTAGGATTAATTTG----------CTCTGTAAGATCGAGAT
TACAGAGTGCGAGTAGTACAA-----------------------------------------------------------
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--------------------
>chr1B_1_TraesCS1B01G304600
TTGAGTGCTTGTAGTCGTCGCTCCGTGGTTTATGGATCTGGATGTAATTTATATTATTTCTAGTGTTCGTTGTACTACCA
TGATTGAAGATGAATAGATTGGAAGTTCTTGTTACATGAAAGAAAAAGTGGCTGCAGCTAACGGCGTCTTTCTCCCGAAA
AAAAACACTAACGGCGTCTTCTTTGTGCA-AACAGGTCGGAGCCGGTTTACACGAGACGAGATATGCCACAAATCGATCA
ATCAAACGCGTTTGTACTTTGTACAGGCGTGGACTAGTGACCCGTCATCGTCACTCCGGGCTCGCACGAGCCACCGCGTC
G---------------TCCGCAGCCTTGCCGCCGAAGCATCTTCTGTCGAGACAACGGGCCGGACAAGACAA---GGTGG
CGCGGAAGCGGAGCGGCAATCTTTGAATTTGACCTGACCCGATCCCCGCCTCCTCCAGCGCACGCCTCGTCTGTCGCCCG
TCGTGCGAGGTCCATTCCA----------ACAACCTTGCGCTCACGCGAGAGTAACATGAGTACATGACATGGCGGCATG
GCCG-------GGAGGCCGACACGACAGCAAGGCGCCAACTGGCTCACGGGCCCCACTAGCTCGTTCGGACCAGGACCCC
GTCGCCAGAGACTCAGAATACCAGTAGTGCACGTAAAATACTGCCGCCGTTCCTTCTTGCTGTCAGCAATGATTGCCAT-
--GTAGGAGTACATGTTGCTCTCCATGCAAAAAATATACTAC-TAT-------GTACATGTTGCTCGGTCATACGACCTT
-GA-------ATACGCGTCAATTAACGGCCGGAGTGCATGCATCTACCGATCTACTCCTACGTGTATGCATGTAGAGATG
GTATGCTCTGTATGTGCTAC------------------------------------------------------------
--------------------------------------------------------------------------------
GTATTTCGCAAAAG------AAAAAAAATGC----TCTGTGTGTGCGTACATTCCTCGAAATTTCTTAAAGCCGAGTAGC
TTGCCGCACTGACTAACCGTACGTGGGCGACATTTCCACGTCTGCCCGCTATATATACGGCCCACAGAAACCTCTCGCCC
TCTCACTTTTAATCCCGTCTCATTAT---CTGTCTCGCGCTGTTTGCTAGCC------ACTTGCGACGACTCCAAAACCT
CGGCACCAAGGAAAA-GAGAAGTCGCCGTCGCCGTCCTCGACCGATCCGATGGAGTCCGAGAAGGCATCGCGGCCGGCGT
CGCTCCTCGGGACGCTGCGGACGGCGGTGAAGAAGGTGCGGTTCCTCCTCTCCTTCAGCGCCACGCGCTGGATCATCAAC
TCCATCGCCGGCCGCCGGAGCGCGCCCGGCGCGACGGCGCCGCTCCGCCTCAGCTTCGGCTCGAGGCGGCCGGGCCTGCT
CGACGCGGAGGACGACGACG---GCTCCCCCGCGTCCACCGCCGGGCCGGCCAGGACGGCGAGCCTCGGGTCGGGCGGCG
TGTCGCGGACGAGCAGCGCGGTGGCGGCGTCGGAGTACTCGAGGTCCGCTTCGTCGGGCGCGACGTCCTCGTCGAGCGGG
GGGTCGTCGCCGGCGGGGGACGACGACATCGACCGGCGCGCGGAGCTGTTCATCGCCAACTTCTACAAGCACATCCAGAT
GGAGCGGCAGGTGTCGCTGCAGCTGCGCTACTGCAGGGTCGACAGCCTGCAGGAGAGGTCGCCTCCCCGCAGGGTTTCTT
GACCGATTTGGTCCCCGG-ATATGCGTTGCGATTCTTGTTTAATTTCGTGTGAGAACAGGTGTGTGTATGTGGATTTAGA
TGGGTGTTTTTTTGTTCCATCATTTCTGCGCGTCGTCCTCTAGGATTAATTTG----------CTCTGTAAGATCGAGAT
TACAGAGTGCGAGTAGTACAAATAAACAGAGTTCTTTGAGAACTTGGGGGAGACT-GAGTATTCTCCTCAACATTGAGAA
ATATCTTTGTATGTGCATCACCCATTGAAAG---TGAGGAGAATAGGCTGAATAGCAGGCTAG-----------------
-----------------------------------------------------------------------------CCT
AGCCAGAATCAATTAATCAAGAATCCACGGTTGGTACTATCTCCTTGTAGGTCTACAATATTCGATGTCACATGGGCAGC
CGGAACCAATGAATCAAGTATTTCCTTATATGTCCGGCATATTCAATTTCATATGGGAC------------TACTCTATA
CTCACAGTGCAAACTTCACATGTGCACTTTTTCATCCCTTGTGTTAGAAGG---GAGAGAGGGATTTTGTGGAATAGTTT
TT--A----TGTATTGCTTGAGCCTCGTGGGCATATATATAGGAGTACAATGACCAACTTGAAGTACAAGACAAGCCGGA
ATAAATCCTAGTCTATCTCGTCTTTCCTAATACAATCACGTTACTCAACATCCCCCCGCAGTCACAACGGTAGCAACGCA
GACGGTGAGACTGGAGAAGAATCCGAAGGCAAGCCGACGGACCACCCCCCCACAGTCGTAACGGTCGACGCATCGCGGAG
TCGTGGTTGGAGTGGAAACCAACGAGGTTGCTCAAGCAGGTGGTAGCCCTTTGTGCCGTTTGTCGATGTAGCCGAGAGCG
TGTGTGGTGGAGCCGTGGTCGAGGTAGCCCTGCGAAGAATGCCGTGGTCGATGTCGAGTCGGGGTGGCCGGTGTCGAGGA
AGTCGCCGTGGAGCCGCGGGCGCAAGGGGGCGCCGAGTTAGTCGTGGGCGCGGTGGTGTCGAAGTAGTGGTGCGCCAGGA
CGAAGATGATGTTGACGACGCGTCGCGCCGGGGTTGCCAACCCTGGGGACACATCGTAGACGAAGGCACGCGTCGGTGTT
GCCAGCACCGGGCATGCGTAGACGAACGGAGACGAAGTTGACGAAGCGCCGCGCCAGGCTTGCCAGGCCCGGGGACACGT
CGTGGACGAAGGCACGTGGC
>chr1A_168
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-------CTAACGGCGTCTTATTTGCGCA-AACAGGTCGGAGCCGGTTTACACGAGGCGCGATAAGCGACAG----ATCA
ACCAAACGCGTTTGTCCTTTGTACTGACGTGGACTAGTGG-CCGTCGTCGTCACTCCGGGCTCGCACGAGCCACCGCGTC
GTCGCCACACCACGGCTCCGCAGCCTTGCCGCCGAAGCATCTTCTGTCGAGACAACGGGCCGGGCAAGGTGGCGCGGTGG
CGCGGAAGCGGAGCGGCAATG------TTTGACCTGACCCGATCCCG---TCCTCCAGCGCACGCCTCCTCTGTCGCCCG
TCGTGCGAGGTCCATTCCACCTTGCGTT-----------------------GTAACATG---------------------
GCGGCATGGCCGGGGGGCGACACGACAGCAAGGCGCCAACTGGCTCACGGGCCCCACGAGCGCGTTTGGACCAGGACCCC
GTCGCCAGAGGCCCAGAATACCAGTAGTGCACGTAAAATACTGCCGCCGTTCCTTCTTGATGTCAGCAATGATTGCCATG
TAGTAGGAGTACATGTTGCTCTCCATGCAAAAATAAAAACAAAATAAAAAATCGTACATGTTGCTCGGTCATACGACCTT
-GTAGGGAGTATAAGCGTTAATTAA-GGCCGGAGTGCATGCATCTACCGATC------CACGTGTATGCATGTAGAGACG
GTATGCTCTGTA-------C------------------------------------------------------------
--------------------------------------------------------------------------------
GTATTTCGCAAAAA------AAAAAATGCTCTGTATCTGTATGTGCGTGCATTCCTCGAAATATCTTAATTCCGAGTAGC
TTGCCGCACTGAGCAAC-GTACGTGGGCGACATTTCCACGTCCGCCAGCTATATATACAGCCCACAGGAACCTCTCGCCC
TCTCACTTTTAATCCCGTCTCATCAT---CTGTCTCCCGTTGTTTGCTAGCC------ACTTGCGACGACTCCAAAACCT
CGCCACCAAGGAAAAAGAGAAGTCGCCGTCGCCGTCCTCGACCGATCCGATGGAGTCCGAGAAGGCGTCGCGGCCGGCGT
CGCTCCTGGGGACGCTCCGGACGGCGGTGAAGAAGGTGCGGTTCCTGCTCTCCTTCAGCGCCACGCGGTGGATCATCAAC
TCCATCGCCGGCCGCCGGAGCGCGCCCGGCGCGACGGCGCCGCTCCGCCTCAGCTTCGGGTCCAGGCGGCCGGGCCTGCT
CGACGCGGAGGACGACGACGACGGCTCCCCCGCGTCCACCACCGGGCCGTCCAGGACGGTGAGCCTCGGGTCGGGCGGCG
TGTCGCGGACGAGCAGCGCGGTGGCGGCGTCGGAGTACTCGCGGTCCGCGTCGTCGGGCGCGACGTCGTCGTCGAGCGGG
GGGTCGTCGCCGGCCGGGGACGACGACATCGACCGGCGCGCGGAGCAGTTCATCGCCAACTTCTACAAGCACATCCAGAT
GGAGCGGCAGGTGTCGCTGCAGCTGCGGTACTGCCGGGTCGACAGCCTGCAGGAGAGGTCGCCTACCCGCAGGGTTTCTT
GACCGATTTGATCCCCCGTATATGCATTGCGATTCTTG-TTCATTTCGTGTCAAAACAGGTGTGTGTATGTGGATTTAGA
TGGGTGTTTTTTCGTTCCATCATTTCTGCGCGTCTTC---TAGGATATTAATTTGTTCTGTATTTCTGTAAGATCGAGAT
TACAGAGTGCGAGTAG---AAATAAACAGAGTTCTTTGAGAACTTGGGGGAGAATCGAGTACTCTCCTCAACATTGAAAA
ATATCTTAGTATGTACTACATCATTCACAAAATCTGAGGAGAATAGGCTGAATAGCAGGCCTTGATATGCAGCCCTTCTA
TCTTTTTACAACAGCAACTGTAATCTGGATTTCATCCAACCAAAACAATTAGCCAAGCGTGCTCACGTTATAATTTACCT
AGCCAGAATCAATTAGTCAATAATATACGGTTGGTACCATCTCCTTGCAGGTCTGCAATATTCGATTTCACATGGGCGGC
CGGAACCAATGAATCAAGTATTTCTTTATAGGTCTGGCTTATTCAATTCCACATGGGCAACATCTACTCTATACACTACA
CTCACAGTGCAAACTTCACATGTGCACTTTTCATCCCTTG----------------------------------------
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>chr1D_168
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-------CTAACAGCGTCTTATTTGTGCACAACAGGTCGGAGCCGGTTTACACGAGACGAGGTAAGCGACAA----ATCA
ACCAAACGCGTTTGTCCTTTGTACTGACGTGGACTAGTGG-CCGTCGTCGTCACTCCGGGCTCGCACGAGCTACCGCGTC
GTCGCCACACCACGGCTCCGCAGCCTTCCCGCCGAAGCATCTTCTATCTAGACAACGGGCCGGACAAGGTGGCGCGGTGG
CGCAGAAGCGGAGCGGCAATG------TTTGACCTGACCTGATCCCCTCCTCCTCCAGCGCACGCCTCGTCTGTCGTCCG
TCGTGCGAGGTTCATTCCAAGTTTCCAACACAACCTTGCGCTCACGCGAGAGTAACATG---------------------
GCCG-------GGAGGCCGACACGACAGCAAAGCGCCAACTGGCCCACCGGCCCCACGAGCGCGTTTGGACCAGGACCCC
GTCGCCAGAGGCCCAGAATACCAGTAGTGCACGTAAAAAACTGCCGCCGTTCCTTCTTGATGTCAGCAATGATTGCCAT-
--GTAGGAGTACATGTTGCTCTCCATGCAAAAAAAAAGGAAAATAT-------GTACATGTTGCTCGGTCATACGACCTT
TGA-------ATACGCGTTAATTAACGGCCGGAGAGCATGCATCTACCGGTC------TACGTGTATGCATGTAGAGATG
TACTCCCTCCGTTCTTAAATATAAATCTTTGTAGAGATTCCACTAGATGGACTACATACAAAGCAAAATAAATAAATCTA
AACTTAAAATGCATCTATATACATCCGTATGCAGTTTATAGTGGAATCTCTACAAAGACTTACATTTAGGAACGAAGGGA
GTATTTCGCAAAATAAAGAAAAAAAATATGC----TCTGTATGTGCGTACATTCCTTGAAATTTCTTAAAGCCGAGTAGC
TTGCCGCACTGACCAAC-GTGCGTGGGCGACATTTCCACGTCCGCCAGCTATATATACAGCCCACA-GAACCTCTCGCCC
TCTCACTTTTAATTCCCTCTCATTATTATCTGTCTCACATTGTTTGCTAGCTACTCCTACTTGCGACGACTCCAAAACCT
CGGCACCAAGGAAAAGGAAAA------GTCGCCGTCCTCGACCGGTCCGATGGAGTCCGAGAAGGCATCGCGGCCGGCGT
CGCTCCTCGGGACGCTGCGGACGGCGGTGAAGAAGGTCCGGTTCCTGCTCTCCTTCAGCGCCACGCGGTGGATCATCAAC
TCCATCGCCGGCCGCCGGAGCGCGCCCAGCGCGACGGCGCCGCTCCGCCTCAGCTTCGGCTCCAGGCGGCCGGGCCTGCT
CGACGCGGAGGACGGGAGCA---GCTCCCCCGCGTCCACCGCCGGGCCGACGAGGACGGTGAGCCTCGGGTCGGGCGGCG
TGTCGCGGACGAGCAGCGCGGTGGCGGCGTCGGAGTACTCCAGGTCCGCGTCGTCGGGCGCGACGTCGTCGTCGAGCGGG
GGGTCGTCGCCGGCGGGGGACGACGACATCGACCGGCGCGCGGAGCAGTTCATCGCCAACTTCTACAAGCACATCCAGAT
GGAGCGGCAGGTGTCCCTGCAGCTGCGGTACTGCCGGGTCGACAGCCTGCAGGAGAGGTCGCCTCCCCGCAGGGTTTCTT
GACCGATTTGATCCCCGG-ATATGCATTGCGATTCTTG-TTAATTTCGAGTGAAAACAGGTGTGTGTATGTGGATTTAGA
TGGGTGTTTTTTCGTTCCATCATTTCTGCGCGTCGTC---TAGGATTAATTTG----------TTCTGTAAGATTGAGAT
CACAGAGTGCGAGTAGTACAAATAAATAGAGTTCTTTGAGAACTTGGGGGAGGCT-GAGTATTCTCCTCAACATTGAGAA
ATATCTTTGTATGTGCATCACTCATTGAAAG---TGAGGAGAATAGGCTGAATAGCAGGCTAG-----------------
-----------------------------------------------------------------------------CCT
AGCCAGAATCAATTAATCAAGAATCTACGGTTGGTACTATCTCCTTGTAGGTCTAAAATATTCGATTTCACATGGGCAGC
CGGAACCAATGAATCAAGTATTTCCTTATAGGTCTGGCATATTCAATTTCACATGGG-----------------------
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>chr7A_2099
CTTGCT--------------------------------------------------------------------------
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------------------------------------------GTTGGAAGG---GAGAGAGGGATT-GGTGGAATA---G
TTTGTTCATTGTATTGCTTGAGCCTCATGGGCATATATATAGGAGTACATG-ATCTACTTGGAGTACAAGGCAAGCCAGA
ATATTTCCTAGTCTAACCTATGTTTCCTAATACAATCACGTTACTCAACATCCCCCCGCAGTCACAACGGGAGCGATGCA
GACGGTGAGACTGCAGAAGAATCCGAAGGCAAGCCGACGGAC-A-CCCCCCACAGTCGTAACGGTCGATGCATCGCGGAG
TCGTGGCTGGAGTGGAAACCAACGAGGTTGCTCAAGCAGGCGGTAGCCCTTTGTGCCGTTTGTCGATGTAGCCGAGAGCG
TGTGTGGTGGAGCCGTGGTCGAGGTAGCCGTGCGAAGAATGCCGTGGTCGATGTCGAGTCGGGGTGGCCGGTGTCGAGGA
AGTCGCCGTGGAGCCGCGGGCGCAAGGGGGCGCCAAGTTAGTCATGGGCGCAGTGGTGTCGAAGTAGTGGTGCGCCAGGA
CGGAGATGATGTTGACGACGCGTCGCGCCGGGGTTGCCAACCCTGGGGACACATCGTAGACGAAGGCACGCGTCGGTGTT
GCCAGCACCGGGCATGCGTAGACGGACGAAGACGAAGTTGACGAAGCGCCGCGCTAGGCTTGCCAGGCCCGGGGACACGT
CGTGGACGAAGGCACGCGGC
>chr3B_2101
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---------------------------------------TGTGTTAGAAGG---GAGAGAGAGATTTGGTGAAATAGTTG
TTCG----TTGTATTGCTTGAGCCTCGTGGGCATATATATAGGAGTACAATGACCAACTTGAAGTACAAGACAAGCCGGA
ATAAATCCTAGTCTATCTCGTCTTTCCTAATACAATCACGTTACTCAACATCCCCCCGCAGTCACAACGGTAGCGACGCA
GACGGTGAGACTGGAGAAGAATCCGAAGGCAAGCCGACGGAC-A-CCCCCCACAGTCGTAACGGTCGACGCATCGCGGAG
TCGTGGCTGGAGTGGAAACCAACGAGGTTGCTCAAGCAGGCGGTAGCCCTTTGTGCCATTTGTCGATGTAGCCGAGAGCG
TGTGTGGTGGAGCCGTGGTCGAGGTAGCCATGCGAAGAATGCCGTGGTCGATGTCGAGTCGGGGTGGCCGGTGTCGAGGA
AGTCGCCGTGGAGCCGCGGGCGCAAGGGGGCGCCGAGTTAGTCGTGGGCGCAGTGGTGTCGAAGTAGTGGTGCGCCAGGA
CGGAGATGATGTTGACGACGCGTCGCGCCGGGGTTGCCAACCCTGGGGACACATCGTAGACGAAGGCACGCGTCGGTGTT
GCCAGCACCGGGCATGCGTAGACGGACGAAGACAAAGTTGACGAAGCGCCGCACCAGGCTTGCCAGGCCCGGGGACACGT
CGTGGACGAAGGCACGCGGC
>chr2A_2101
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---------------------------------------TGTGTTAGAAGG---GAGAGAGGGATTTGGTGGAATA---G
TTCG----TTGTATTGCTTGAGCCTCGTGGGCATATATATAG---TACAATGATCAACTTGGAGTACAAGACAAGCCGGA
ATAAATCCTAGTCTATCTCGTCTTTCCTAATACAATCACGTTACTCAACATCCCCCCGCAGTCACAACGGTAGCGACGCA
GATGGTGAGACTGGAGAAGAATCCGAAGGCAAGCCGATGGAC-A-CCCCCCACAGTCATAACGGTCGACGCATCGCGGAG
TCGTGGCCGGAGTGGAAACCAACGAGGTTGCTCAAGCAGGCGGTAGCCCTTTGTGCCGTTTGTCGATGTAGCCGAGAGCG
TGTGTGGTGGAGCCGTGGTCGAGGTAGCCGTGCGAAGAATGCCGTGGTCGATGTCGAGTCGGGGTGGCTGGTGTCGAGGA
AGTCGCCGTGGAGCCGCGGGCGCAAGGGGGCGCCGAGTTAGTCGTGGGCGCAGTGGTGTCGAAGTAGTGGTGCGCCAGGA
CGGAGATGATGTTGACGACGCGTCGCGCCGGGGTTGCCAACCCTGGGGACACATCGTAGACGAAGGCACGCGTCGGTGTT
GCCAGCACCGGGCATGCGTAGACGGACGAAGACGAAGTTGACGAAGCGCCGCGCCAGGCTTGCCAGGCCCGGGGACACGT
CGTGGACGAAGGCACGCGGC
>chr3B_2102
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----------------------------------------GTGTTAGAAGG---GAGAGAGGGATT-GGTGGGATA---G
TCCG----TTGTATTGCGTGAGCCTCGTGGGCTTATATATAGGAGTACAATGACCAACTTGGAGTACAAGACAAGCCGGA
ATAAATCCTAGTCTATCTCGTCTTTCCTAATACAATCACGTTACTCAACATCCCCCCGCGGTCACAATGGTAGCGACGTA
GACGGTGAGACTGGAGAAGAATCCGAAGGCAAGCCGACGGAC-ACCCCCCCACAATCGTAACGGTCGACGCATCGCGGAG
TCGTGGCTCGAGTGGAAACCAACGAGGTTGCTCAAGCAGGCGGTAGCCCTTTGTGCCGTTGGTCGATGTAGCCGAGAGCG
TGTGTGGTGGAGCCGTGGTCGAGGTAGCCGTGCGAAGAATGCCGTGGTCGATGTCGAGTCGGGGTGGCCAGTGTCGAGGA
AGTCGCCGTGGAGCCGCGGGCGCAAGGGGGCGCCGAGTTAGTCGTGGGCGCAGTGGTGTCGAAGTAGTGGTGCGCCAGGA
CGGAGATGATGTTGACGACGCGTCGCGCCGGGGTTGCCAACCCTGGGGACACATCATAGACGAAGGCATGCGTCGGTGTT
GCCAGCACCGAGCATGCGTAGACAGACGAAGACGAAGTTGACGAAGCGCCGCGCCAGGCTTGCCAGGCCCGGGGACATGT
CGTGGACGAAGGCACGCGGC
>chr7B_2103
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-----------------------------------------TGTTAGAAGG---GAGAAAGGGGTTTTGTGGAATA---G
TTTGA----TGTATTTCTTGAGCCTCGTGGGCATATATATAGGAGTACAATGACCAACTTGGAGTACAAGACAAGCCGGA
ATAAATTCTAGTCTATCTCGTCTTTCCTAATACAATCACGTTAATCAACATCCCCCCGCAGTCACAACGGTAGCGACGCA
GACGGTGAGACTGGAGAAGAATCCGAAGGCAAGCCAACGGAC-A-CCCCCCACAGTCGTAACGGTCGACGCATCGCGGAG
TCGTGCCTGGAGTGGAAACCAACGAGGTTGCTCAAGCAGGCGGTAGCCCTTTGTGCCGTTTGTCGATGTAGCCAAGAGCG
TGTGTGGTGGAGCCGTGGTCGAGGTAGCCGTGCGAAGAATGTCGTGGTCGATGTCGAGTCGGGGTGGCCGGTGTCGAGGA
AGTCGCCGTGGAGCCGCGGGCGCAAGGGGGCGCCGAGTTAGTCGTGGGCGTAGTGGTGTCGAAGTAGTGGTGCACCAGGA
CGGAGATGATGTTGACGACGCGTCGCGCCGGGGTTGCCAACCCTGGGGACACATCATAGACGAAGGCACGCGTCGGTGTT
GCCAGCACCGGGCATGCGTAGACGGACGAAGACGAAGTTGACGAAGTGCCGCGCCAGGCTTGCCAGGCCCGGGGACACGT
CGTGGACGAAGGCACGCGGC
>chr7B_2103
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-----------------------------------------TGTTAGAAGG---GAGAGAGAGGATTGGTGGAATA---T
TTCG----TTGTATTGCTTGAGCCTTGTGGGCATATATATAGGAGTACAATGATCAACTTGGAGTACAAGACAAGCCGGA
ATAAATCCTAGTCTATCTCGTCTTTCCTAATACAATCACGTTACTCAATATCCCCCCGCAGTCACAACGGTAGCGACGCA
GACGGTGAGACTGGAGAAGAATCCGAAGGCAAGCCGGCGGAC-A-CCCCCCACAGTCGTAACAGTCGACGCATCGCGGAG
TCGTGGCTGGAGTGGAAACCAACGAGGTTGCTCAAGCAGGCGGTAGCCCTTTGTGCCGTTTGTCGATGTAGCCGAGAGCG
TGTGTGGTGGAGCCGTGGTCGAGGTAGCCGTGCGAAGAATGCCGTGGTCGATGTCGAGTCGGGGTGGCCGGTGTCGAGGA
AGTCGCCGTGGAGCCGCGGGCGCAAGGGGGCGCCGAGTTAGTCGTGGGCGCAGTGGTGTCGAAGTAGTGGTGCGCCAAGA
CGAAGATGATGTTGACGACGCGTCGCGCCGGGGTTGCCAACCCTGGGGACACATCATAGACGAAGGCACGCGTCGGTGTT
GCCAGCACCGGGCATGCATAGACGGACGAAGACGAAGTTGACGAAGCGCCGTGCCAGGCTTGCCAGGCCCAGGGACACGT
CGTGGACGAAGGCACGCGGC
>chr5B_2103
--------------------------------------------------------------------------------
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-----------------------------------------TGTTAGAAGG---GAGAGAGGGATT-GGTGGAATA---G
TT-G----TTGTATTGCTTGAGCCTCGTGGGCATATATATAGGAGTACAATGACCAACTTGGAGTACAAGACAAGCCGGA
ATAAATCCTAGTCTATCTCGTCTTTCCTAATACAATCACGTTACTCAACATCCCCCCGCAGTCACAACGGTAGCGACGCA
GACGGTGAGACTGGAGAAGAATCCGAAGGCAAGCCGATGGAC-ACCCCCCTACAGTCGTAACGGTCGACGCATCGCGGAG
TCGTGGCTGGAGTGGAAACCAACGAGGTTGCTCAAGCAGGCGGTAGCCCTTTGTGCCGTTTGTCGATGTAGCCGAGAGCG
TGGGTGGTGGAGCCGTGGTCGAGGTAGCCGTGCGAAGAATGCCGTGGTCGATGTCGAGTCGGGGTAGCCGGTGTCGAGGA
AGTCGCCGTGGAGCTGCGGGCGCAAGGGGGCACCGAGTTAG-CATGGGCGCAGTGGTGTCGAAGTAGTGGTGCGCCAGGA
AGTAGATGATGTTGACGACGCGTCACGGCGGGTTTGCCAAGCCCGGGGACACATCGTGGACGAAGGCACGCACCGGTGTT
GCCAGCACCGGGCATGCGTAGACGGACGAAGACGAAGTTGACGAAGCGCCGCGCCAGGCTTGCCAGGCCCGGGGACACGT
CGTGGACGAAGGCACGCGGC
>chr2B_2103
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-----------------------------------------TGTTAGAAGGGGAGAGAGAAGGATT-GGTGGAATA---G
TT-G----TTCGTTTGCTTGAGCCTCGTGGGCATATATATAGGAGTACAATTATCTACTTGGAGTACAAGACAAGCCAGA
ACAAATCCTAGTCTATCTCGTCTTTCCTAATAAACATTA--TACTCAACATCCCCCCGCAGTCACAACGGTAGAGACGCA
GACGGTGAGACTGGAGAAGAATCCGAAGGCAAGCCGACGGAC-ACCCCCCCACAGTCGTAACGGTCGACGCATCGCGGAG
TCGTGGCTGGAGTGGAAACCAACGAGGTTGCTCAAGCAGGCGGTAGCCCTTTGTGCCGTTTGTCGATGTAGCCGAGAGCG
TGTGTGGTGGAGCCGTGGTCGAGGTAGCCGTGCGAAGAATGCCGTGGTCGATATCGAGTCGGGGTGGCCGGTGTCGAGGA
AGTCGTCGTGGAGCCGCGGGCGCAAGGGGGCGCCGAGTTAGTCGTGGGCGCAGTGGTGTCGAAGTAGTGGTGCACCAGGA
CGGAGATGATGTTGACGACGCGTCGCGCCTGGGTTGCCAACCCTGGGGACACATCGTAGACGAAGGCACGCGTCGGTGTT
GCCAGCACCGGGCATGCGTAGACGGACGAAGACGAAGTTGACGAAGCGCCGCGCCAGGCTTGCCAGGTCCGGGGACACGT
CGTGGACGAAGGCACGCGGC
>chr2B_2103
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-----------------------------------------TGTTAGAAGG---GAGAGAAGGATTTGGTGGAATA---G
TT-G----TTGTATTGCTTGAGCCTCATGGGCATATATATAGGAGTACAATCATCTACTTGGAATACAAGACAAGGCAGA
ACAAATCCTAATCTATCTCGTCTTTCCTAATAAACATTA--TACTCAACATCCCCCCGCAATCACAACGGTAGCGACGCA
GACGGTGAGACTGGAGAAGAATCCGAAGGCAAGCCGACGGAC-ACCCCCCCACAGTCGTAACGGTCGACGCATCGCGGAG
TCGTGGCTGGAGTGGAAACCAACGAGGTTACTCAAGCAGGCGGTAGACCTTTGTGCCGTTTGTCGATGTAGCCGAGAGCG
TGTGTGGTGGAGCCGTGGTCGAGGTAGCCGTGCGAAGAATGCCGTGCTCGATGTTGAGTCGGGGTGGCCGGTGTCGAGGA
AGTCGTCGTGGAGCCGCGGGCGCAAGGGGGCGCCGAGTTAGTCGTGGGCGCAGTGGTGTCGAAGTAGTGGTGCGCCAGGA
CGGAGATGATGTTGACGACGCGTCGCGCCGGGGTTGCCAACCCTGGGGACACATCATAGACGAAGGCACGCGTCGGTGTT
GCCAGCACCGGGCATGCGTAGACGGACGAAGACGAAGTTGACGAAGCGCCGTGCCAGGCTTGCCAGGCCCGGGGACACGT
CGTGGACGAAGGCACGCGGC
>SNPs
S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS-------------S-------------------------------------------S--S----SSSS----
-S-------------S--------S-S------------SS-----S---------------------------------
--------------------------------------------------------------------SSSS--------
--------------------SSSSSSS--------------------S--------------------------------
-----------------------------------------------------------SSSSSSSSSSSSSSSSSSSSS
---------------------------------------------------------S---S----S-------------
----------S-S----------------------------------------------S--------------------
----------------------------------S-S-SS-S--------------------------------------
------------------S---------------------------------SSSSSS----------------------
-------------S-SSS--------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------S-------------S---------------------------------------
-------------S---S------------------------S---S-----------S--------S------------
------------------------------------S--S----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S--------------------S------------
--------------------------------------------------------------S-----------------
-------------------------------------------------S---------S--------------------
-------------------------------------------------S-----------------S------------
----------------------------------------------S---------------------------------
---------------------------S------S---------------------------------------------
----------S--------------S------------S--------------S--------------------------
------------S------------------------SSS-----------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S----------------------------------------S-------------
------------------------------S---S----------------S-----SS---------------S---S-
-------------------------------SSSS--S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------------------------------S-------------------------------------
------S---------------------------------S---------------------------------------
-----------------------------S--------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
------------------------S---S---------------------------------------------------
----------------S---
>forward_36
----------------GTCGCTCCGTGGTTTATGGA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>reverse_1240
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CTGTTTGCTAGCCACTTGCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>forward_559
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AGTACATGACATGGCGGCAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>reverse_2635
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AACGCA
GACGGTGAGACTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
