>input_sequence_68701
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-----------------------------------------------ATGAAGCACATATTCAAGATCATCGCGGTGCTG
GCAGCAATCTCCGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTCCCTCGCAGTTTTACTTGGTTGGTGAGTGTCAT
CAATTTTTGTCACTTCTAATGTCTTGAAGAAGAGAGGCTC-CTTTTAATTAAGATGTTTGCATCTGGCTTTTGTTGTTAT
AGCTTCCCGCCTTTTAATTAAGATGATTGCATCTGGCTTTTGTTGTTATAGCTTCCCATCTACTTGGTAGTGGCGCTTGG
ATGCTACGGCCTTTTCATGGTTGGATATGGGCTCATGTTCTTCCCAACCTGCCCTCAAGAAGCGGTGTTACTACAGCAGG
TAGCTGACATAGTCCTAGCAGCCTAATTTTC-----------------CGTTTTGTCTACGCAGTCTTATTTCCATTTTG
AAAACCAATAGTCTCTAGAACTTGCATCCTTTGTTATTTCCCGTTTTAGTTTCACACCTGTGCACTGTCTATTATATATC
CTTTTCTCTTGTTTTTCTGCTGGCATAACGAGATTCAAGGTATTCTGCACAAAGAAAAGAACAGAAACTCTGAAAACTTC
ATAAGTTTATTTGTACCTTATGCGTATCATTGTATGAATTTTCATAATGGTCACTGCAAAT-AAA-CCAAGCCACCTGAT
TTCCGAACTTTTAAGTTTTCTGTAG-ATCACATGTTTGGTTTCTTCCCATTTGTAATTCTTTGAGCTCGACCAACTATGC
AGGATATTGTGGAGGCAAAGGAATTCCTATCAAAAAGAGGTGTTGATGTGAGCTCTGATTGA------------------
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>chr5D_1_TraesCS5D01G304200
GCACATAATCTTTTTTTGTAGATTTACAATCTTGACATCTATTCAATTTCTGCTAGATAGCTAAAGCGTGTAGTTTGTTT
ATGTATAATCCAATGTAATCATGTACTGCAAATGTGTTATATATCTAATTTTTTTTATAAACTTCTTCTCCTTTATTCGT
TCATAAGTAAAGTAGCATCGTTTACAAGTAAAGGGATAACCTCATCAGGGGCGTTATCCATCCAAACACTC-GAGAAGAA
AACCTAGCTAACCTTGCTAGTTCATGAGCTACTCGATTACGTTCCCTATTACAATGATCATAAATCACATGGGAAAAACC
TAATGACATGAAATAACAGTCGTCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
CCACGCTATCCGAATTCACTTCAATCTTACTGCATCCGACGGTATTAGCAAGATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCGAAGCAAAGGTCCCATCTTTTCATTAGCAGCCGCTATAAATTTCCCCCTATGGTCCCGGATAA
CTGCTCCAAATGTTGCTGCGAGTGTGTCACTATCAAATCCCGCGTCAACGTTTAATTTCACGTAACCATACTTTGGTTTC
AACCAAGCATCTGAACGGACGTGAGCCTTTGGGCTATAAGAGATGGTATAATTTGCTACTAAGCCTCTCACTGACATATT
GATTTGATATGCGCTTTGAGTTTCTTTGTGTTATATATCTAATTAATTAGCTCAGAACTTAACCAACTATATTTCCTAGA
AACTGTATTGTACATGTACCAGTGAGGCAGTGACACACATCGTGTCTCAGTTCGGCCAGTAGGCAAAATATGAAA--ATA
ATGGATGCTGCTACAGTTTACCTGACGGTCTACTGCCTGCTCTAGGAAATCAGGACGTAAACTGGCCGCCCTAGTTCTCA
TTTGCTCTTTTGATTGATGGCAGACAAGCGCTGCGTTC----CCTAGATGAAGCACATATTCAAGATCATCGCGGTGCTG
GCAGCAATCTCCGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTCCCTCGCAGTTTTACTTGGTTGGTGAGTGTCAT
CAATTTTTGTCACTTCTAATGTCTTGAAGAAGAGAGGCTC-CTTTTAATTAAGATGTTTGCATCTGGCTTTTGTTGTTAT
AGCTTCCCGCCTTTTAATTAAGATGATTGCATCTGGCTTTTGTTGTTATAGCTTCCCATCTACTTGGTAGTGGCGCTTGG
ATGCTACGGCCTTTTCATGGTTGGATATGGGCTCATGTTCTTCCCAACCTGCCCTCAAGAAGCGGTGTTACTACAGCAGG
TAGCTGACATAGTCCTAGCAGCCTAATTTTC-----------------CGTTTTGTCTACGCAGTCTTATTTCCATTTTG
AAAACCAATAGTCTCTAGAACTTGCATCCTTTGTTATTTCCCGTTTTAGTTTCACACCTGTGCACTGTCTATTATATATC
CTTTTCTCTTGTTTTTCTGCTGGCATAACGAGATTCAAGGTATTCTGCACAAAGAAAAGAACAGAAACTCTGAAAACTTC
ATAAGTTTATTTGTACCTTATGCGTATCATTGTATGAATTTTCATAATGGTCACTGCAAAT-AAA-CCAAGCCACCTGAT
TTCCGAACTTTTAAGTTTTCTGTAG-ATCACATGTTTGGTTTCTTCCCATTTGTAATTCTTTGAGCTCGACCAACTATGC
AGGATATTGTGGAGGCAAAGGAATTCCTATCAAAAAGAGGTGTTGATGTGAGCTCTGATTGAGGTCAATACCAATGATCT
ATGTTTCATGACCAGTTTGAAGCTTCCTGGATACCATATAG----AAAAA-ATATGGCATTTCACCATGTCTAGATATTT
GTTACTAACGCAGTTTTTGTGAGTGGCATGTTACAATTCTAGATTTTGTTAGTTCAGTGGATGGCTTGTCACGATACTAG
TTATGTCAGGAAAACAGTGTGAGAACAA--------CTAATTAATGGTTTGTTAGCAAGTCCATCAGTGTTCAAGACATG
-TCTGCTATTTTAGCAATCTGGTTTTCATCACTGGATGTGTATCCATTTTTTCTGCGCGGTATCATCTTTGGTGATTAGC
CTACCCCAACTTGTTTGGGGCTAAATACTTTGTTGTTGTTGTTGTAGTATCATCTTTGGCGATGGTTCGAATTGCGAGTT
CCTTTCATGGTTCAGTCCCGGTGTGCGGAATTTTCTGTCCAGTTCAGATTTCTTTCGTTTGCTAAATCTGGAATGATTTC
TTGAGTTTTTCAA-TTCGACAAAGTTCTGAACCCCTCGTGATTAGCAAAAGATCATTAAACTACCAATACCATTGTTGCT
CCATGTTTACAAAAC-------------------------AATTGTAGAATGAACCAGTATACACCCTGTGCAGTGAACC
TGTGTCAACTCATAATCCTATTTTATACATGTTCAGTCACATGCCAAGTTGGCAGCAGACA----GTCGACTGCTACCTT
GAGGTAGCTGCTTCCGACGGGGACTTGTTTGTGTCCGGTCCATCATCTTCTCCGGCACCGGGCACTCGCTCCGCCC---C
GTGGTTCTCTGTTGTGGCCTCCTCATCAATTGCGCCTGTGACCTGCGCCGTGTCCTCGGCAGCCTCCCTGGAGCCCCTGC
TTGCAATAGTTCT-AGTGGTCAGTTGTGAGCTTGTGACACTG---TCAGGGTAGATGCGGGTAGTAGCTATCATGAATGT
TTAGGGGGA-----AACACAAACTGAAGGAGACAGTACTTGTATGAGTAGATGATGAGACCAATTGCAGTGCCGGCGA
>chr3D_126
TAATT--TTT----------------------------------------------------------------------
-----------------------------------------------------TTGATAAACTTCTTCTCCTTTATTCAT
TCATAAGTAAAGTAGCATCGTTTACAAGTAAAGGGATAACCTCATTAGGGGCGTTATCCATCCAAACACTCGGAGAAGAA
AACCTAGCTAATCTTGCTAGTTCATGAGCTACTCGATTACGTTCCCTATTACAATGATCATAAATGACATGGGAAAAACC
TAATGACATGAAATAACAGTCGTCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
TCACGCTATCCGAATTCACTTCAACCTTACTACATCCGACGGTATTAGCAAGATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCGAAGCAAAGGTCC-ATCTTTTCATTAGCAGCCGCTATAAATTTCCCCCTATGGTCCCGGATAA
CTGCTCCAAATGTTGCTGCGAGTGTGTCACTATCAAATCCCGCGTCAACATTTAATTTCACGTAACCATACTTTGGTTTC
AACCAAGCATCTGAACGGACGTGAGCCTTTGGGCTGTAAGAGATGGTATAATTTGCTACTAAGCCTCTCACTGACATATT
GATTTGATATGCACTTTGAGTTTCTTCGT---------------------------------------------------
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>chr1A_126
TAATATTTTT----------------------------------------------------------------------
-----------------------------------------------------TTGATAAACTTCTTCTCCTTTATTCAT
TCATAAGTAAAATAGCATCGTTTACAAGTAAAGGGATAACCTCATTAGGGGCGTTATCCATCCAAACACTCGGAGAAGAA
AACCTAGCTAACCTTGCTAGTTCATGAGCTACTCGATTACGTTCCCTATTACAATGATCATAAATGACATGGGAAAAACC
TAATGACATGAAATAACAGTCGTCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
CCACGCTATCCGAATTCACTTCAATCTTACTACATCCGACGGTATTAGCAAGATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCGAAGCAAAGGTCC-ATCTTTTCATTAGCATCCGCTATAAATTTCCCCCTATGGTCCCGGATAA
CTGCTCCAAATGTTGCTGCGAGTGTGTCACTATCAAATCCCGCGTCAACATTTAATTTCACGTAACCATACTTTGGTTTC
AACCAAGCATCTGAACGGATGTGAGCCTTTGGGCTGTAAGAGATGGTATAATTTTCTACTAAGCCTCTCACTGACATATT
GATTTGATATGCACTTTGAGTTTCTTCGT---------------------------------------------------
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>chr6B_128
--ATT--TTT----------------------------------------------------------------------
-----------------------------------------------------TTGATAAACTTCTTCTCCTTTATTCAT
TCAAAAGTAAAGTAGCCTCGTTTACAAGTAAAGGGATAACCTCATCAGGGGCGTTATCCATCCAAACCCTCGGAGAAGAA
AACCTAGCTAACCTTGCTCGTTCATGAGCTACTCGATTACGTTCCCTATTATAATGATCATAAATGACATGGGAAAAACC
TAATGACATGAAATAACAGTCGTCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
CCACGCTATCCGAATTCACTTCAATCTTACTACATCTGACGGTATTAGCAAGATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCGAAGCAAATGTCC-ATCTTTTCATTAGCAGCCGCTATAAATTTCCCCCTATGGTCCCGGATAA
CTGCTCCAAATGTTGCTGCGAGTGTGTCACTATCAAATCCCGCGTCATCATTTAATTTCACGTAACCATACTTTGGTTTC
AACCAAGCATCTGAACGGACGTGAGCCTTTGGGCTGTAAGAGATGGTATAATTTGCTACTAAGCCTCTCACTGACATATT
GATTTGATATGTGCTTTGAGTTTCTT------------------------------------------------------
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>chr6B_128
--ATT--TTT----------------------------------------------------------------------
-----------------------------------------------------TTGATAAACTTCTTCTCATTTATTCAT
TCATAAGTAAAGTAGCATCGTTTATAAGTAAAGGGATAACCTCATCAGGGGCGTTATCCATCCAAACACTTGGAGAAGAA
AACCTAGCTAACCTTGCTAGTTCATGAGCTACTCGATTACGTTCCCTATTACAATGATCATAAATGACATGGGAAAAACC
TAATGACATGAAATAACAGTCATCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
CCATGCTATCCGAATTCACTTCATTCTTACTGCATCCGGCGGTATTAGCAAGATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCGAAGCAAAGGTAC-ATCTTTTGATTAGCAGCCGCTATAAATTTCCCCCTATGGTCCCGGATAA
CTGCTCCAAATGTTGCTGCGAGTGTGTCACTATCAAATCCCGCGTCAACGTTTAATTTCACGTAACCATACTTTGGTTTC
AACCAAGCATCTGAATGGATGTGAGCCTTTGGGCTATAAGAGATGGTATAATTTGCTACTAAGCCTCTCACTGACATATT
GATTTGACATGCGCTTTCAGTTTCTTCGT---------------------------------------------------
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>chr4A_128
ATTTTT---T----------------------------------------------------------------------
-----------------------------------------------------TTGATAAACTTCTTCTCCTTTATTCAT
TCATAAGTAAAGTAGCATTGTTTACAAGTAAAGGGATAACCTCATCCGGGGCGTTATCCATCCAAACCCTTGGAGAAGAA
AACCTAGCTAACCTTGCTAGTTCATGAGCTACTCGATTACGTTCCCTATTACAATGATCATAAATGACATGGAAAAAACC
TAATGACATGAAATAACAGTCGTCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
CCACGCTATCCGAATTCATTTCAATCTTACTACATCCGACGGTATTAGCAAGATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCAAAGCAAATGTCC-ATCTTTCCATTAGCAGCCGCTATAAATTTCCCCCTATGGTCCCGGATAA
CTGCTCCAAATGTTGCTGCGAGTGTGTCACTATCAAATCCCGCGTCAACATTTAATTTCACGTAACCATAATTTGGTTTC
AACCAAGCATCTGAACGGACGTGAGCCTTTGGGCTGTAAGAGATGGTATAATTTGCTACTAAGCCTCTCACTGACATATT
GATTTGATATGCGCTTTGAGTTTCTT------------------------------------------------------
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>chr5A_129
-TTTTT---T----------------------------------------------------------------------
-----------------------------------------------------TTGATAAACTTCTTCTCCTTTATTCAT
TCATAAGTAAAGTAGCATCGTTTACAAGTAAAGGGATAACCTCATTAGGGGCGTTATCCATTCAAACACTCGGAGAAGAA
AACCTAGCTAACCTTGCTAGTTCATGAGCTACTCGATTACGTTCCCTATTACAATAATCATAAATGACATGGGAAAAATC
TAATGACATGAAATAACAGTCGTCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
CCACGCTATCCGAATTCACTTCAATCTTACTACATCCGACGGTATTAGCAAGATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCGAAGCAAAGGTTC-ATCTTTTCATTAGCAGCCGCTATAAATTTCCCCCTATGGTCCCGGATAA
CTGCTCCAAATGTTGCTGCGAGTGTGTCTCTATCAAATCCCGCGTCAACATTTAATTTCACGTAACCATACTTTGATTTC
AACCAAGCATCTGAACGGATGTGAGCCTTTGGGCTGTAAGAGATGGTATAATTTTCTACTAAGCCTCTCACTGACATATT
GATTTGATATGCACTTTGAGTTTCTT------------------------------------------------------
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>chr1A_129
-TTTTT---T----------------------------------------------------------------------
-----------------------------------------------------ATGATAAACTTCTTCTCCTTTATTCAT
TCATAAGTAAAGTAGCATCGTTTACAAGTAAAGGGATAACCTCATTAGGGGCGTTATCCATCCAAACACTCGGAGAAGAA
AACCTAGCTAACCTTGCTAGTTCATGAGCTATTCGATTATGTTCCCTATTACAATGATCATAAATGACATGGGAAAAACC
TAATGACATGAAATAACAGTCGTCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
CCACGCTATCCGAATTCACTTCAATCTTACTACATCCGACGGTATTAGCAAGATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCGAAGCAAAGGTCC-ATCTTTTCATTAGCAGCCGCTATAAATTTCCCCCTATGGTCTCTGATAA
CTGCTCCAAATGTTGTTGCGAGTGTGTCACTATCAAATCCCGCGTCAACATTTAATTTCACGTAACCATACTTTGGTTTC
AACCAAGCTTCTGAACGGGCGTGAGCCTTTGGGCTGTAAGAGATGGTATAATTTGCTACTAAGCCTCTCACTGACATATT
GATTTGATATGCACTTTGAGTTTCTT------------------------------------------------------
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>chr6A_129
--------------------------------------------------------------------------------
------------------------------------------------TTTTTTTGATAAACTTCTTCTCCTTTATTCAT
TCATAAGTAAAGTAGCATCGTTTACAAGTAAAGGGATAACCTCATTAGAGGCGTTATCCATCCAAACACTCGGAGAAGAA
AACCTAGCTAACCTTGCTAGTTCATGAGCTACTCGATTACGTTCCCTATTACAATGATCATAAATGACATGGGAAAAACC
TAATGACATGAAATAACAGTCGTCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
CCACGCTATCCGAATTCGCTTCAATCTTACTACATCCGACAGTATTAGCAAAATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCGTAGCAAAGGTCC-ATCTTTTCATTAGCAGCCGCTATAAATTTCCCCCTATGGTCCCGGATAA
CTGCTCCAAATGTTGCTACGAGTGTGTCACTATCAAATCCCGCGTCAACATTTAATTTCACATAACCATACTTTGGTTTC
AACCAAGCATCTGAACGGATGTGAGCCTTTGGGCTGTAAGAGATGGTATAATTTGCTACTAAGCCTCTCACTGACATATT
GATTTGATATGCACTTTGAGTTTCTTCGT---------------------------------------------------
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>chr7B_130
--------------------------------------------------------------------------------
-------------------------------------------------TTTTTTGATAAACTTCTTCTCCTTTATTCAT
TCATAAGTAAAGTAGCATCGTTTACAAGTAAAGGGATAACCTCATCAGGGGCGTTATCCATCCAAACCCTCGGAGAAGAA
AACCTAGCTAACTTTGCTAGTTCATGAGCTACTCGATTACGTTCCCTATTACAATGATCATAAATGACATGGGAAAAACC
TAATGACATGAAATAACAGTCGTCTATAATGGATGAAGCGACTGAAGAAGAGTAGCCTTGGCTCAACGCATTCACCACCT
CCACGCTATCCGAATTCACTTCAATCTTACTACATCCGACGGTATTAGCAAGATTCAAACCAAACCTCACTGCAATTGCT
TCTGCTGTGAACGAGTCGAAGCAAATGTCC-ATCTTTTCATTAGCAGCCGCTATAAA-TTCCCCCTATGGTCCCGGATAA
CTGCTCCAAATGTTGCTGCGAGTGTGTCACTATCGAATCCCGCGTCAACATTTAATTTCACGTAACCATAATTTGGTTTC
AACCAAGCATCTGAACAGACGTGAGCCTTTGGGCTGTAAGAGATGGTATAATTTGCTACTAAGCCTCTCACTGACATATT
GATTTGATATGCGCTTTGAGTTTCTTCGT---------------------------------------------------
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>chr5A_747
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---------------------------GTGGTATATATCTAATTAATTAGCTCGGAACTTAATCAAAAATATTTCCTAGA
AACTGTATTGTACATGTTCCAGTAACACAAGTCAGA-------GTCTCTGTTCAGCCAGTAGGCAAAATATGAAGATATA
ATAGATGCTGCTACAGTTTACCTGACGGCCTACTGCCTGCTCTAGGAAATCAGGACGTAAACTGGCCGTGCTAGTTCTCA
TTCGCTCTTTTGATTAATGGCAGACGAGCGCTATATT----TT-TAGATGAAGCACATATTCAAGATCATCGCGGTGCTG
GCGGCAATCTCCGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTCCCTCGCAGTTTTACTTGGTTGGTGAGTGACAT
TAAAAATTTTCACTCCTAATGTCATGAAGACAT---GCTC-CTTTTAATTATGATGTTTGCTTGTGGCTTTTGTTGTTG-
------------------------------------------------TAGCTTCCCATCTACTTGGTAGTGGCGCTTGG
ATGCTATGGCCTTTTTATGGTTGGATATGGGCTCATGTTCTTCCCAACCTGCCCTCAAGAAGTGGTATTACTACAGCAGG
TAGCTGACGTAGTCCTAGCAGCCTAATTTTC-----------------CTTTTTGTCT--GCAGTCTTATTTCCATTTTG
AAAGCTAGTAGTCTCTAGAACTTGCATCCTTTGTTATTTCCTGTTTTAGTTCCACACCTGTGCATTGTCTATTAT-----
CTTTTCTCTTGGTTTTCTGCTGGCATAACGAGATTCAAGGTATTATGCAGAAAGGAAACAAGGCAAACTCTGAAAACTTC
ATAAGTTTATTTGTACCTTATGTGTATCATTGTATGAATTTTCATAATGGTCACTACAAAG-AAAACCAAGCCACCTGAT
CTTGAAACTTTGAAGTTTTCTGTAC-ATCACATGTTT--TTTCTTCCCATTTATAATTCTTTGAGCTCGACCAACTATGC
AGGATATCATGGAGGCAAAGGATTTCCTATCAAAAAGAGGTGTTGATGTGAGCTCTGATTGAGGTCAATACCAATGATTT
ATGTTTCGTGACCAGTTTGAAGCTTCCTGGATACTGGATAG---AAAAAA-TTATGACATTTCACTGTGTCTAGATATTT
GTTACTAATGCAGTCTTTGTGAGTGGCGTGTTACAGTTCTACATTTTGTTAGTTCAGTGGATGGTTTGTCAGGATATTAG
TTATGTCAGGAAAACAGTGTGAGAATAGCTAAATAGCTAATTAATGGTTTGTTAACAAGTCCATCAATGTTCA-GACATG
-TTTGCTATTTAA-CAATCTGGTTTTCATCACTGGATGTGTATCAATTTTTTCTG-------------------------
------------------------------------------TGCAGTATCATCTTTGGTGATGCTTCGAATTGCGAGCT
ACTTTGATGGTTCAGTCCCAGCATGCGGAATTTGCTGTCCAGTTCAGATATCCTTCATTTGCTAAATCTGGAATGACTTC
TTGAGTTTTTCAAATTTGACAAAGTTCTCAA---CTCATGATTAGCAAAAGATCACAAAACCTTTAC-------------
---------CAATACCATTATTGCTCCATGTTTACATAACAATTGTAGAATGAACCAGTATACACCCTGTGCAGTGAACC
TGTGAAAACTCATAATCCTATTTTATACATGTTCAGTCACATGCCAAGTTGGCAGCAGACG----GTCACCTGCTACCTT
GAGGTAGCTGCTTCCGACGGGGACTTGTTTGAGTCTGGTCCATCATCTTCTCCAGCACCAGGAACTCGCTCTGCCA---T
GCGGTTCTCTGTCGCTGCCTCCTCGTCAGTTGCGCCTGCGACCTGTGCAGTGTCCTCGGCAGCCTCCCTGGAGCCCCTGC
TTGCAATAGTTCT-AGTGGTCAGTTGTGAGCTTGTGACACTG---TCAGGGTAGATGCAGGTAGTAGCTATCATGAATGT
TTACGGGGGGGGGGGGCATCAGCTGAAGAAAACAGTACTTGTATGAGTAGATGATGAGACCAATTGCAGTGCC-----
>chr5B_856
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--------------------------------------------------------CAGTAGGCAAAATATGAAGATA--
ATGGATGCTGCCACAGTTTACCTGACGGCCTACTGCCTGCTCTAGGAAATCAGGACGTAAACTGGCTGCCGTAGTTCTCA
TTCACTCTTTTGATTGGTGGCAGACGAGCGCTAGCTGTGTGTCCTAGATGAAGCACATATTTAAGATCATCGCGGTGCTG
GCAGCAATCTCCGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTCCCTCGCAGTTTTACTTGGTTGGTGAGTGTCAT
CAATTGTTTTCACTTCTAATGTCTTGAAGAAGAGAGGCTC-CTTTTAATTAAGATGTTCGCTTCTGGCTTTTGTTGTTA-
------------------------------------------------TAGCTTCCTATCTACTTGGTAGTGGCGCTTGG
ATGCTACGGCCTTTTCATGGTTGGATATGGGCTCATGTTCTTCCCAACCTGCCCTCAAGAAGCGGTGTTACTACAGCAGG
TAGCTGACATAGTCCTAGCAGCCTAATTTTC-----------------CTTTTTGCCTACGCAGTCTTATTTCCATTTTG
AAAACCAATAGTCTCTAGAACTTGCATCCTTTGTTATTTCCCGTTTTAGTTTCACACCTGTGCACTGTCTATTATATATC
CTTTTCTCTTGTTTTTCTGCGGGCATAACGAGATTCAAGGTATTCTGCACAAAGAAAAGAACAGAAACTCTGAAAACTTC
ATAAGTTTATTTGTACCTTATGCGTATTATGGTATGGATTTTCATAATGGTCACTACAAAT-AAA-CCAAGCCACCTGAT
TTCCGAACTTTTATGTTTTCTGTAC-ATTACATGTTTGGTTTCTTCCCATTTGTAATTCTTTGAGCTCGACCAACTATGC
AGGATATTGTGGAGGCAAAGGAATTCCTATCAAAAAGAGGTGTTGATGTGAGCTCTGATTGAGGTCAATACCAATGATTT
ATGTTTCATGACCAGTTTGAAGCTTCCTGGATACCGTACAG---AAAAAA-TTATGGCATTTCACCATGTCTAGATATTT
GTTACTAACGCAGTTTTTGTGAGTGGCATGTTACAATTCTAGATTTTGTTAGTTCAGTGGATGGCCTGTCACGATACTAG
TTATGTCAGGAAAACAGTGCGAGAACAA--------CTAATTAATGGTTTGTTAGCAAGTCCATCAGTGTTCAAGACATG
-TCTGCTATTTTA-CAATCTGGTTTTCATCACTGGACGTGTATCCATTTTTTCTGCGCGGTATCATCTTCGGTGGTTAGC
CTACCCCAACTTGTTTGGGGCTAAATACTTTGTTG---TTGTTGTAGTATCATCTTTGGCGATGGTTCGAATTGCGAGTT
CCTTTCATGGTTCAGTCCCGGTGTGCGGAATTTTCTGTCCAGTTCAGATTTCTTTCGTTTACTAAATCTGGAATGATTTC
TTGAGTTTTTCAAATTCGACAAAGTTCTGAACCCCTCATGATTAGCAAAAGATCATTAAACCTTTAC-------------
---------CAAAAT-------------------------AATTGTAGAATGAACCAGTATACACCCTGTGCGGTGAACC
TTTGTCAACTCATAATCCTATTTTATACATGTTCAGTCACATGCCAAGTTGGCAGCAGACAATCAGTCGCCTGCTACCGT
GAGGTAGCTGCTTCCGACGTTGTCTTGTTTGAGTCCGGTCCATCATCTTCTCCGGCACCAGGCAGTCTTTCCGCTGCTGT
GCGGTTCTCTGTCGCTGCCTCCTCGTCAATTGTGCCTGTGACCTGCGCCGTGTCCTCGGCAGCCTCCCTGGAGCCCCTGC
TTGGAATGGTTCTCAGTGGTCAGTTGTGAGCTTGTTACACTATCATCAGAGTAGATGCAGGTAGTAGCTATCATGAATTT
TT------GGAGGCAACACCAACTGAAGAATACAGTACTTGTATGAGTAGATGATGAGACCAATTGCAGTGCCAGCGA
>chr3D_953
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---------------------------------------------------------------------------TCTAA
TTCGCCCTTTTGATTGATGGCAGACGAACGCTGCATT----TCCTAGATGAAGCACATATTCAAGATCATCGCAGTGCTG
TCGGCGATCTCGGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTTCCTCGCAGTTATACTTGGCTGGTGAGTGCCAT
CAATTTTT-CACTTGCTAATTTATTGCAGTTAAGACACTGTCTTTCGATTAAGATGGTTGCTTGTGACTTCTGTTCTTG-
------------------------------------------------TAGCTTCCCATCTACTTGGTAGTGGCGCTTGG
ATGCTACGGCCTTTTCATGGTTGGGTATGGGCTGATGTTCTTTCCCACTTGTCCTCGAGAAGCCATACTACTACAGCAGG
TAGTGGATGTAGTCCTAGTAACCTAATTCTCTCTCTCTCTCTCTCTCTCTTTTTGTCTATGCAGTCTCATTGCCATGCTG
AGAACTAATAATCGCTAGAATTTACATCCTAGGTATTCTCAGCTTAATAT---ACACTTGTGCATTGTATATTTTACACT
CTTTTATTTTGGTTTTCTGCTGGCATAATGAGATTCAAGGTATTATGCAGAAGGGA----------------------TC
ATAAGTTTCTTTGTCCCTTATGTGTATGATTGTATGGCTTTTCATAATGGCCACTACAAAT-AAAACCAAGCCACCTGAT
TTT-GAAACTTTAAATTTTCTGTATAATTACATCTTTGCTTTGTTCCCATTTCTAATTATTTGTGCTCGACCTACTATGC
AGGATATTGTGGAGGCAAAGGAATTCTTATCCAAAAGGGGTGTTGATGTGGGCTCTGACTGAGGTCGATTCCAATGTTTA
ATATTTTGTGGCCAGTTTGAAGCTTCCTGGATACCATAGCTAGAAAAGGTTATATGACATTTCACTATGCTTAGATAC-T
GTTACTAACACAGTTTTTGTGAGTCGCGTGTTACAATTCTACATTTGAG-------GTGGATGGCTTGTCACGATACTAC
TTGTGTCA-GAAAACATTGTGAGAACAA--------CTAA-GAATGGTTCATTAACAAGTCCGCCGGTGTTCATGACATG
CTTTGCTTTGTAA-CCATCTGGGTTTCATCACTGGATGTGTATCAGTTTGTGCTC-------------------------
------------------------------------------TGCAGTATCGCCTTTGGTGAT-----------------
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>chr3B_953
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---------------------------------------------------------------------------TCTAA
TTCGCCCTTTTGATTGATGGCAGACAAACGCTGCATT----TCCTAGATGAAGCACATATTCAAGATCATCGCGGTGCTG
GCGGCGATCTCGGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTTCCTCGCAGTTATACTTGGCTGGCGAGTGCCAT
TAATTTTT-CACTTGCAAATTTATTGCAGTTAAGACACTGTCTTTCGATTAAGATGGTTGCTTGTGACTTCTGTTGTTG-
------------------------------------------------TAGCTTCCCATCTACTTGGTAGTGGCGCTTGG
ATGCTACGGCCTTTTCATGGTTGGGTATGGGCTGATGTTCTTTCCCACTTGTCCTCGAGAAGCCATACTACTACAGCAGG
TAGTGGATGTAGTCCTAGCAGCCTAATTATCTCTCTCTTT---------TTTTTGTCTATGCAGTCTCATTGCCATGTTG
AGAATTAATAATCGCTAGAATATACATCCTAGGTATTTTCAGCTTAATAT---ACACTTGTGCATTATATATTATACATT
CTTTTCTTTTGGTTTTCTGCTGGCATAATGAGATTCAAGGTATTATGCAGAAGGCA----------------------CC
ATAAGTTTGTTTGTCCCTTATGTGTATGATTATATGGCTTTTCATAATGGCCACTACAAAT-AAAACCAAGCCACCTGAT
TTT-GAAACTTTAAATTTTCTGTATAATTACATCTTTGCTTTGCTCCCATTTCTAATTATTTGTGCTCGACCTACTATGC
AGGATATTGTGGAGGCAAAGGAATTCTTATCCAAAAGGGGTGTTGATGTGGGCTCCGACTGAGGTCAATTCCAGTGTTTA
ATTTTTTATGACCAGTTTGAAGCTTCCTGGGTACCATAGCTAGAAAAAGG-TTATGCCATTTCACTATGTTTATATA-TT
GTTACTAACACAGTTTTGGTGAGTGGCGTGTTACA---CTACATTTGAG-------GTGGATGGCTTGTCACGATACTAC
TTGTGTCA-GAAAACATTGCGAGAACAA--------CTAATGAATGGTTCATTAACAAGGCCATCAGTGTTCATGATATG
-TTTGCTCTGTAA-CCATCCAGATTTCATCACTGAATGCGTATCAGTTTGTGCTC-------------------------
------------------------------------------TGCAGTATCACCTTTGGTGAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr3A_957
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
TTTGCTTTTTTGGTTGATGGCAGACAAACGCTACATT----TCCTAGATGAAGCACATATTCAAGATCATCACGGTGCTG
GCGGCGATCTCGGCCGTCTGGGCTGCGCTCCTTGAAACCTCGACAGTTCCTCACAGTTACACCTGGCTGGTGAGTGCCAC
GAATTCTTTCACTTGCTGATTTATTGAAGTTAAGACACTGTCTTTCGATTAAGACTCTTGCTTGTGACTTTTGTTGTTG-
------------------------------------------------TAGCTTCCCATCTATTTGGTAGTGGCGCTTGG
ATGCTACGGCCTTTTTATGGTTGGGTACGGGCTGATGTTCTTTCCCACCTGTCCTCAAGAAGCCATACTACTACAACAGG
TAGAGGATGTAGTCCTAGTAGCATAATTCTCAG----TTT---------TTTTTGTCTATGCAGTCTCATTGCCATGTTG
AGAACTAATAATCGCTAGAATATACATCCTAGGTATTTTCAGCTTAATAT---ACACTTGTGCATTGTATATTATACATT
CTTTTCTTTTGGTTTTCTGCTGGCATAATGAGATTCAAGGTATTATGCAGAAGGAA----------------------CC
ATAAGTTTCTTTGTGCCTTATGTGTATGATTGTATGGCTTTTCATAATGGCCACCACAAAGAAAA-CCAAGCCACCTAAT
TTTTAAACTTTTAAGTTTTCTGTATAATTACAGTTTTGCTTTGTTCCCGTCTGTAATTATTTGTGCTTGGCCTACTATGC
AGGATATTATGGAGGCTAAGGAATTCTTATCCAAAAGGGGTGTTGATGTGGGCTCTGACTGAGGTCGATTCCAATGTTTA
ATATTTTGTGGCCAGTTTGAAGCTTCCTGGATACCATAGCTAGAAAAGGTTATATGACATTTCACTATGTTTAGATAC-T
GTTACTAACACAGTTTTGGTGAGTGGCGTGTTACAATTCTACATTTGAG-------GTGGATGGCTTGTCACAACACTAC
TTGTGTCC-GAAAACATTATGAGAACAA--------CTAATGAATGGTTCGTTAACAAGTCCATTAGTGTTCATGACATG
-TTTGCGTTGTAA-CCATCTGGATTTCATCACTGGGTGTATATCAGTTTGTGCTC-------------------------
------------------------------------------TGCAGTATCGCCTTTGGTGAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>SNPs
SS-S--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S----------------------S-
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S---S----------------------S--------S---SS------------
-----------------S-----S-SS--SSSSSSSSSSSSSS-----S----S--------------------S-----
----------------------------S---------------------------------------------------
----------------------------------S--S------------------------------------------
--------------------------------------------------------------------------------
--------S----------------------------------------------------S-----------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
------------------------S-------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-------------------------------------------------------S----S-----
-----------------------------------SSS------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-----------------------SSSS-SSSSSSSSSSSSSS
SSSSSSSSS-----------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------S---------------------------S---------------S---S
-S----------S-SS--------S-------------------------------------------------------
----------------------------------------------------------S---------------------
---S----S----------S--------S-S------------------------------------------S----
>forward_839
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CAGTGAGGCAGTGACACACA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2642
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGGTTCTCTGTTGTGGCCTC-----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
