>input_sequence_68686
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------------------------------------------------------------------------ATGGCCAC
CGGAGGAGACGCCGGGGG------TGGTGGTGGTGGGGAGAAGGGAAGGAGGAAGAAGGTGGAGCTGCTGCAGGAGGCCA
TTCATGGGCTCCTGGAGGAGAAAAGGGGCAAGCAGCGACACC------AAGGGGAGGAGGGCGCCATGGATCATGAGGAG
GATCTCTTCCTCTCCTCGTTGCTCTCCAAGGTATCTATCTATGTGCCTGCTTCTTCTTGTACATCTGAATT-TTTCAGGT
TGCAGATGCACCTTTTGGTCCCAAGATTGGCTTGCATCTGCCGCTGCAATTACCTGACATTCATCT---ACATACGACTT
CATCCTCTGTCGATACAAATCCTGCTGCATTCGTTTCATTTCATCATTCTTGAGATGCAAATCCTGAATTTAACCAATCC
TTTCAACAGTTGGACACGCTGGAAAACGATGTCGATCCGGACAGTGCCGAACTGAACTCCATCAATCCTCACCCGGAGAG
CGGCGAGGAGGCGGGGCCAGGCGACGTGGCGAAAGACCTGGGCAAGATCAAGAGGCAGAACATGATCACCCACATCCTGC
TGGGCACGGTGATGGTGATGATCGCCGCGTGGCAGTTCAACGAGGTGTCGTTCCTCCTCGCGGTGCAGAAGAAGCTGACC
AACCCTTTCAAGTCCGTCGGGGACATGGTCAAGAGTAGCCTCAAGATAGGGAAGAAGCCGGTGGTCGAGGCGATCGAGGC
GTCGCCTCTGCCCCCTGTCGGCGTCCCGGACGTTGCTCGGGCTGATCTGCCGATGCTAGCCATCGGCCATGGTGATAGCT
AG------------------------------------------------------------------------------
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>chr2B_1_TraesCS2B01G365000
TAACTTGAGACTGCAGTGGTCAGTTCATTGCATACAATGGTATGAATTAATAAATAAATATTAAGTTCTCTTGTTTTCTG
ATCCACCTTGACCGCGATGCACAATCTAAAGAAACTAATGCACCGATAGTAATATACGTTTCTTTCATGTGAACCATCTT
GTGGTTGGACAATGGTATCCCCAGCGCACCAGGGTTCAAGTGCTGGTGCTCGCATTTATTCTGGATTTATTTCAGGATTT
TCAGTGATGCGTGTTCATTGGGAGGAGACATTCCCATCGATTACGAGGTGCCTACGGAATACAGGATTTTCGATGATACG
CGTTCAGTCGAAGGAGACGCTCTCATCGACTACGAGGTGTCTACGGTAACTTCATAAAATCTTAAGATGATATACCGGTT
CAATCTCTTTGAAGTGCTGCGAGGGGTAGAGTGTGCATATACGCATTCATTGAGTATATACACATTCATATGAGCAGGTG
CGTCCATACTGTGTTTAGAAAATATATACATTTTCTTTCAAAGCACACGAATCTTTTCAAGATCCTTGCTCTCGTTTG--
---CCCGCGGTGCCACGTCGCCGGACAAAAGAGGCCCCT------AGATCGAGCACGATGCAAGGAGCATGTGGCCCGCA
CACGAGTTCCCATGCGGTCGCCACGCCACACGTCGCACATGCGAG-----C--TATTTAGCCCTGTCGTCAAGGTCACCT
CCGGCCAGCCG------CCGCTGCTACGCCATTTTTGGATCCCCCGTCCTCACCCCCCGTCCGCCAGCAGCCGCAGACCT
CGCGATCTCATCTCGCCGTCGCTTGGATTGCCAGTTGCAGCGCCCGTTTGGCAGGGACCTAGAAACACCTATCTGGGCCC
GAAGGATCTC-------TCTGAATCCACGACAGCGACATGAATTCAGTATAATTTCT-TCCAATTGGGAAAGGGGCGTGC
ACGTTCCTCTGTTTCCTTTCGTTTTCAGCCGTTCATGCGCATCTGTTCTTGTCCCATTCAATCGGCGTCGGCATGGCCAC
CGGAGGAGACGCCGGGGG------TGGTGGTGGTGGGGAGAAGGGAAGGAGGAAGAAGGTGGAGCTGCTGCAGGAGGCCA
TTCATGGGCTCCTGGAGGAGAAAAGGGGCAAGCAGCGACACC------AAGGGGAGGAGGGCGCCATGGATCATGAGGAG
GATCTCTTCCTCTCCTCGTTGCTCTCCAAGGTATCTATCTATGTGCCTGCTTCTTCTTGTACATCTGAATT-TTTCAGGT
TGCAGATGCACCTTTTGGTCCCAAGATTGGCTTGCATCTGCCGCTGCAATTACCTGACATTCATCT---ACATACGACTT
CATCCTCTGTCGATACAAATCCTGCTGCATTCGTTTCATTTCATCATTCTTGAGATGCAAATCCTGAATTTAACCAATCC
TTTCAACAGTTGGACACGCTGGAAAACGATGTCGATCCGGACAGTGCCGAACTGAACTCCATCAATCCTCACCCGGAGAG
CGGCGAGGAGGCGGGGCCAGGCGACGTGGCGAAAGACCTGGGCAAGATCAAGAGGCAGAACATGATCACCCACATCCTGC
TGGGCACGGTGATGGTGATGATCGCCGCGTGGCAGTTCAACGAGGTGTCGTTCCTCCTCGCGGTGCAGAAGAAGCTGACC
AACCCTTTCAAGTCCGTCGGGGACATGGTCAAGAGTAGCCTCAAGATAGGGAAGAAGCCGGTGGTCGAGGCGATCGAGGC
GTCGCCTCTGCCCCCTGTCGGCGTCCCGGACGTTGCTCGGGCTGATCTGCCGATGCTAGCCATCGGCCATGGTGATAGCT
AGATCCGCAGGACGAAGAGGAACGACTCGTGCAGCAGAAATGCCATGTGTTCTCCCCTCCAAGATATTGTTATGCTGTTC
GTCTTGTCCACAGATGAGATTTGTATGGCCATGTGCTGGTGCATGTGTTCTAGGCTGATGCCGCAAGCAGGAGAAACTGA
ATTTAATTCAGCATCTTTTGATCTTTGCACCATTTATTA-----------------------------------------
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----------------------------------------------------------TTACTGGAGTCGATCATCATCA
TCTGAAAAATGCCTGGGGAGGTCGAACCATCTCTTAGAAACAGCCCTGTATTTCAGACAAGGG-----TGGAGGGATGTG
TCTGATTGATTTCCATGTGTAGTTTCAGCAAACTCTTTGTACTACTACTGAAGCAAGCGTGTCTGTAGCTGAGCTGATGC
CTGCAGTTACACTTCATTTCTCCCAGGAATCCTGTTATGTGGATGTGAT-------------------------------
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-----GTTTCTGCAAATTCTGCTGGTATCGTTTTCATACAGTTCCTGCGTTTTATTTTTTGTGACGATACAGTTCTTGCC
TGCTATGTAGCGATTCATCATGCAACTGATTTGGGGTAGTAGCAAATTGGCCTGTTAATTTTCCTTTGGGACATGTCGTC
GGTTTCACTGCTTGAATCCCTTCTTACCTGGGAGCATCTCCAATAGATGAGGGCACCAAGGTGCCTTTTACATCA--AAA
AACCTCCAA-------TGATGTACAATAGGGCACTAGTGCGCCGATAGAT-ATGATGTAAAACGGAATTGATATAGACAC
GATGTTCTGTGCACGGCGTCTAGCTGATAAGTGCTCTGTGCCGTCAGATGCTTTAGGAACAAAAGTACAAATGGTCGTCA
CATTTGTCCCTTGTTATCAAGTCTAAGTATTTTCCGGATTCTTCCACATGGACTGCTACTTCTAGCCCTCCAAAATCAGC
TTTCTAGTCATCTATTCTTAGAATGCTCCCTAAACTCAAAGCTCATTGCTTATACCATATCACCCAAGGGAGCATTTCCA
TTTGGAGTACCCCTTGGTGCACGGCTTGGACT
>chr2A_499
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------------------AAAAAAAATACATTTCTTTCCAGAGCACACGAATCTTTTCAAGATCCTTGCTCTCGTCTG--
---CCCGTGGCGCCACGTCGTCGGACAAAAGAGGCCCCTAGATCGAGATCGAGCACGATGCAAGGAGCATGTGGCCCGCA
CACGAGTTCCCATGCGGTCGCCACGCCACACGTCGCACATGCGAACTGTACAGTATTTAGCCCTGTCGTCAAGGCCACCT
CCGGCCAGCCGCCGCTGCCGCTGCTACGCCATTTTTGGATCCCCCGTCCTCACCCCCTGTCCGCCAGCAGCCGCAGACCT
CGCGATCTCATCTCGCCGTCGCCTGGATTGCCAGTTGCAGCGCCCGTTTGGCAGGAGCCTAGAAACACCTATCTGGGCCC
GAAGGATCCCTCTGAAATCTGAATCCACGATAGCGACATGAATTTTGTGTAATTTTCCTCCAATTGGGAAAGGGGCGTGC
AGCTTCCTCTGTTTTCTTTCGTTTTCAGCCGTTCCTGCGCGTCTGCTCTTGTCCCATTCAATCGGCGTCGGCATGCCCAC
CGGAGGAGACGCCGGGGGTGGTGGTGGTGGTGGTGGGGAGAAGGGAAGGAGGAAGAAGGTGGAGCTGCTGCAGGAGGCCA
TTCATGGGCTCCTGGAGGAGAAAAGGGGCAAGCAGCGACACC------AAGGGGAAGAGGGCGCCATGGATCATGAGGAG
GATCTCTTCCTCTCCTCGTTGCTCTCCAAGGTATCTATCTATGTGTGCGCTTCTTCCTGTACATCTGAATTGTTTCAGGT
TGCAGATGCACCTTTTGGTCCCAAGATTGGATTGCATCTGCCGCTGCAATTACCAGACATTC------------------
-------------------------TGCATTCATTTCATTTCATCATTCTTGAGACGCAAATCCTGAATTA---------
TTTCAACAGTTGGACTCGCTGGAAAACGATGTCGATCCGGACGGTGCCGAACCGAGCTCCATCAATCCTCACCCGGAGAG
CGGCGAGGAGGCGGGGCCAGGCGACGTGGCGAAAGACCTGGGCAAGATCAAGAGGCAGAACATGATCACCCACATCCTGC
TCGGCACGGTGATGGTGATGATCGCCGCGTGGCAGTTCAACGAGGTGTCGTTCCTCCTCGCGGTGCAGAAGAAGCTGACC
AACCCTTTCAAGTCCGTCGGGGACATGGTCAAGAGCACCCTCAAGATAGGGAAGAAGCCGATGGCCGAGGCGATCGAGGC
GTCGCCTCTGCCCCCTGTCGGCGCCCCGGACGTTGCTCGGGCTGATCTGCCGATGCTGGCCATCGGCGACGGCGATAGCT
AGATCCGCAGGATGAGGAGGGATGACTCGTGCGGCAGAAATGCCATGTGTTCTTCCCTCCA-GATATTGTTATGTTGTTC
GTCTTGTCTAGAGATGAGATTTGTATGGCCATGTGCCGGTGCATGTGTTCTGGGCTGGTGCCGCAAGTAGGAGAAACTGA
ATCTAATTCGGCATCTTATGATCTTTGCACCATTTGTTACTGGAGTCGACCATCATCACCTGAAGAATGCCTGGGACGGT
TGAACCATCTCTTAGAAACAGCCCTGTATTTCAGACAAGGGTGAAGTGGAGGAATGTGTTTGATTGATTTCCATGTGTAG
TTTCAGCAAACTCTTTGTACTACTACTGAAGCAAGCGTGTCTGTAGCTGAGCTGATGTCTGCAGTTACACTTCATTTCCC
TCCAGATATTGTTATGTTGTTCGTCTTGTCTAGAGATGAGATTTGTATGGCCATGTGCCGGTGCATGTGTTCTGGGCTGG
TGCCGCAAGTAGGAGAAACTGAATCTAATTCGGCATCTTATGATCTTTGCACCATTTGTTACTGGAGTCGACCATCATCA
CCTGAAGAATGCCTGGGACGGTTGAACCATCTCTTAGAAACAGCCCTGTATTTCAGACAAGGGTGAAGTGGAGGAATGTG
TTTGATTGATTTCCATGTGTAGTTTCAGCAAACTCTTTGTACTACTACTGAAGCAAGCGTGTCTGTAGCTGAGCTGATGT
CTGCAGTTACACTTCATTTCTCCCGGGAATCCTGTTGTGTGGATGTGATAAAAAAGGGCAACCTGGTGCATGTAGCTCCC
GCTTGCGCAGGGTCCAGGGAAGGGTCCGACCATTTTGGGTTTATAGTACGCAGCCTTTTCCTACATTTCTGTAAGAGGCT
GTTTCCAAGACTTGAACCCATGACCTCATGGTCACAAGGCAGCAGCTTTACCACTGCGCCAAGGCTCCCCTTCACTGGAT
GTGATGTTTCTGCAAATTCTGATGGTATAGTTTTCATACAGTTCCTGCCTCTT-TTTTTTAAGACGATACAGATCCTGCC
TGCTATGTAGCGATTCATCATGCAACTGATTTGGAGCAGTGGCAAATTGGCCTGTTAATTTTACTTTGGGACATGCCGTC
AGTTTCACCGACTGAATCCCTTCTTACCT---------------------------------------------------
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>chr2D_512
TTC-----------------------------------------------------------------------------
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---------------------------------CTTTCCAAAGCACAAGAATCTTTTCAAGATCCTTGCTCTCGTTTGCC
CGTCCCGTGGTGCCACGTCGCCGGACAAAAGAGGCCCCTAG------ATCGAGCACGATGCAAGGAGCATGTGGCCCGCA
CACGAGTTCCCATGCGGTCGCCACGCCACACGTCGCACATGCGAACTATAC--TATTTAGCCCTGTCGTCAAGTCCACCT
CCGGCCAGCCGCCGCTGCCGCTGCTACGCCATTTTTGGATACCCCGTCCTCAACCCCCGTCCGCCAGCAGCCGCAGACCT
CGCAATCTCATCTCGCCGTCGCCTGGATTGCCAGTTGCAGCGCCCGTTTGGCAGGAGCCTAGAAACACCTATCTGGGCCC
GAAGGATCCC-------TCTGAATCCACGACAGCGACATGAATTTTGTGTAATTTTCCTCCAATTGGGAAAGGGGCGTGC
ACGTTCCTCTGTTTTCTTTCGTTTTCAGCCGTTCCTGCGCGTCTGTTCTTGTCCCATTCAATCGGCGTCGGCATGGCCAC
CGGAGGAGACGCCGGAGGTGGTGGTGGTGGTGGTGGGGAGAAGGGAAGGAGGAAGAAGGTGGAGCTGCTGCAGGAGGCCA
TTCATGGGCTCCTGGAGGAGAAAAGGGGCAAGCAGCGACAGCAAGGGGAAGGGGATGATGGCGCCATGGATCGTGAGGAG
GATCTCTTCCTCTCCTCGTTGCTCTCCAAGGTATCTATGTCT----CTGCCTCTTCTTGTACATCTGAATTGTTTCAGGT
TGCAGATGCACCTTTTGGTCCCAAGATTGGATTGCATCTGCCGCTGCAATTACCTGACATTCATCTGCTACATCCGACGT
CATCCTTTGTCGATACAAATCCTGCTTCA-----TTCATTTCATCATTCGTTAGATGCAGACCCTGAATTTAT-------
TTTCAACAGTTGGAGACGCTGGAAAACGATGATGATCCGGACGGTGCCGAACTGAGCTCCATCAATCCTCACCCGGAGAG
CGGCGAGGAGGCGGGGCCAGGCGACGTGGCGAAAGACCTGAGCAAGATCAAGAGGCAGAACATGATCACCCACATCCTGC
TCGGCACGGTGATGGTGATGATCGCCGCGTGGCAGTTCAACGAGGTGTCGTTCCTCCTCGCGGTGCAGAAGAAGCTGACC
AACCCTTTCAAGTCCGTCGGGGACATGGTCAAGAGTACCCTCAAGATAGGGAAGAAGCCGGTGGTCGAGGCGATCGAGGC
GTCGCCTCTGCCCCCTGTCGGCGTCCCGGACGTTGGTCGGGCTGATCTGCCGATGCTAGCCATCGGCGACGGTGATAGCT
AGATCCGCAGGATGAAGAGGGATGACTCGTGCGGCAGAAATGCCATGTGTTCTCCCCTCCA-GATTATGTAATGTTGTCC
ATCTTGTCTACAGATGAGATTTGTATGGCCATGTGC------ATGTGTTCTGGGCTGATGCCGCAAGTAGGAGAAACTGA
ATTTAATTCAGCATATTTTGATCTCTGCACCATTTATTACTGGAGTAATCATT-ATCACCTGAAAAATGCCTGGGAAGGT
TGAACCATCTCTTAAAAACAGCCCTGTATTTCAGACAAGGGTGGAGTGGAGGAATGTGTTTGACTGATTTCCATGTGTAG
TTTCAGTAAACTCTTTGTACTACT---GAAGCAAGTGTGTCTGTAGCTGAACTGATGTCTGCAGTTA-------------
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---------CACTTCATTTCTCCAAGGAATCCTGTTGTGTGGATGTGAT-------------------------------
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-----GTTTCTGCAAATTCTGCTGGTATCGTTTTGATACATTTCCTAC--CTT-TTTTTTTAGACGATACAATT-CTGCC
TGCTATGTAGCGATTCATCATGCAACTGATTTGGAGCAGCACCAAATTGGCCTGTTAATTTTCCTTTGGGACATGTCGTC
AGTTTCACTGCCTGAATCCCTTCTTACCTTAGAGCATCTCCAATAGATGAGGGCACCAGGGTGCCTTTCTACATCACAAA
AACCTCCTTCAATAGGTGATGTACAATAGGTCACTACTAGTGCTCCAATAGATGGTGTAAAAC-----------------
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>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS----S-S--------SS--S------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------S-----------------------------S-----
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----------------------S--------------------------------SS-----------------------
--------S-----------------------------------SS--S------SS-----------------------
--------------S-------------------S-----S---------------------------------------
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-------------------------------------------------------S------------------------
---------------------------------------------S----------------------------------
------------------------------S------------------------------------------S----S-
------S-------------------------S---------------------------------------SSSSSSSS
------------------------------------------S------------S------------------------
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-S------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-------------------------------------------------------------------S-S----------
------------S-------S-S---------S----------------------------S------------S-----
--------S---------------------------S--------------S---------------S------------
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-----------------------------------------------------------------------S--------
S-----S----------SS---S---------------------------------------------------S-----
-S-----------------------------------------------------------------------------S
------------------------------------S-------------------------------------------
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------------------------------------------------S-S--S------SS-------------S----
----------------------------------S-S-------------------------------------------
S----------S-----------------SS---------------------------S---------SSSSSSS-----
-------SS---------------------S-----S-SSSS-SSS-SSS----S--------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_95
---------------------------------------------------------------------------TTCTG
ATCCACCTTGACCGC-----------------------------------------------------------------
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>reverse_1863
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----------------------CGACTCGTGCAGCAGAAATG--------------------------------------
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