>input_sequence_68672
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----------------------------------------------------------------------------ATGG
AGCGGCAGCCTCGGCCGCAGCTGGCCGT---GGCGGAGGAGGCCATCGCGCTCTACGACACCTACTGGTTCCACCGCCTC
GTCCTCAACGCCTACTCCCCTCCCGCGCCCCAGCCGCCGCCGCCGGCGCCTGAGCGCGAGCAGCCGGAGCAGGCGCCGGC
GGAGGAGAGCAAGAGCGAGCTGCGGCGGGCCCCGTCCGGGCTGCAGCGGCACCGCAGGACGCGGAGCGACGAGGCCAAGG
CCGCCGCGTTCCACGGCCAGCTGGAGCCGCTCAAGATCCCCAACGGCCACCGCGCGAGGCTCGAGACCATCCTGTCCGGG
AAGGACGGCCTGGCCGCGCCGGAGCCGCTGCCCGAGCGCCGGAGGCCGGAGGCGCGGCGGCCCGGCGGGAGGAGGCGGAG
GAGCCGCCGCGGGCGGAGCCTGTCGGAGCTGGAGTTCGAGGAGGTCAAGGGCCTGCAGGACCTCGGCTTCACCTTCTCCG
AGACCGACGTCGACGCCGAGCTCGCGTCCATCGTGCCGGGGCTCAGGCGGCTGCGCGCGGAGGAAGAAGCCAGAAGAGCC
AAGGCGGCGGAGGCGGCGGCCTGCGCCGAGGAGGAAGCCTGTAGGAACAGGGCCGCCGCGGAGGCCTCCGACGCGGCGCC
GAGGAGGCCGTACTTGTCGGAGGCGTGGGAGGACGAGGAGACGGAGGTGAGGCGGGTGCTGAGCAACTTCAGGATCCCGG
CCGCCGCCGACGGCGCTGACCTCAAGGAGAACCTCCGGCTCTGGGCGCACACCGTGGCCTCCGCCGTCCGGTGA------
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>chr7D_1_TraesCS7D01G368400
CAATGTCCTCAAGCACTTTCTTCTCTTTGTTCTTTATTCTT--TTTGCGAAATTTCTCATAGCTCCTTAATAACCCTCTA
CTTTAGACGTCTATCTACCTAGCATTCGTTAAGATAGATATGAGACGATAAAGAGCACTT-AACATCCCTTATGCTTGGG
TCCCGAAAGCTCAGCTGATGGGTGCGTCAATTCCTGATAAGAGTCTTCGTTATTTTCGCACATG----CATCCCAAAATC
ACGTACTCGGCGAACTATACGCAGGTGATGCATGTTCCGATGGATCTACTCCAGTTTGGACGGGTCGGTTTCAGATGACA
AGAATGGGCCAACTGTTAGTTATACTCAATGTGGAGCTGGGGCCTGTCTCGTACCGTGCGATCACAGGGAACATGGACGA
GTCAGCAGGAAAGCAACCCCTCTTCTGCCTGGTGGTCCTCGACCAAGTCACCTCAATATCTGCTAAACGACATGGATGGC
TTGGTTTCGAGCTCGCGTCTCATCCATTTTTAGCTGCCGCTTCGCTTCACCTGTGGATCCGTCGTAAAAATGCCACAAAT
GCACCATAATCGGCCGTGTTCTCTATTGTTAGGGAGTGTCTTCAGAAAGCCTGATGTAATGTGTCCTCTTTTACATGGAA
GGGAAATTGTGT--------------------------------------------------------------------
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--------AGATAGCAACTGCATCGCCTGCACAGAATGACACGTACGCCGGCACCAGCGTACGAAATACCGCAGAGAATT
TCCGACCAGGCGACACGGCCACAGGCATCAGCCGAGATCGTCAGCACATGCTCGTACA-----ATATACGTGACGGCCAA
GTAGTCTCAGAAACTTCTACGCCCGCACGTTGCCCGCGTGC---------ACCGTGTAATTGCACACCA-------CCGG
ACCGGCCGACCGACGCGCTCGGCTCTGCTAGACTAGACGGGGCTGCGTTTTGCATATAAAAACCTCGCCTGCCGCCGCTC
CCAACGCCCACCGCAGCCAGTCCCGTCGCGGAACCCAACGCGCGCGCACC------------CTCTCTCCCCCCGAATGG
AGCGGCAGCCTCGGCCGCAGCTGGCCGT---GGCGGAGGAGGCCATCGCGCTCTACGACACCTACTGGTTCCACCGCCTC
GTCCTCAACGCCTACTCCCCTCCCGCGCCCCAGCCGCCGCCGCCGGCGCCTGAGCGCGAGCAGCCGGAGCAGGCGCCGGC
GGAGGAGAGCAAGAGCGAGCTGCGGCGGGCCCCGTCCGGGCTGCAGCGGCACCGCAGGACGCGGAGCGACGAGGCCAAGG
CCGCCGCGTTCCACGGCCAGCTGGAGCCGCTCAAGATCCCCAACGGCCACCGCGCGAGGCTCGAGACCATCCTGTCCGGG
AAGGACGGCCTGGCCGCGCCGGAGCCGCTGCCCGAGCGCCGGAGGCCGGAGGCGCGGCGGCCCGGCGGGAGGAGGCGGAG
GAGCCGCCGCGGGCGGAGCCTGTCGGAGCTGGAGTTCGAGGAGGTCAAGGGCCTGCAGGACCTCGGCTTCACCTTCTCCG
AGACCGACGTCGACGCCGAGCTCGCGTCCATCGTGCCGGGGCTCAGGCGGCTGCGCGCGGAGGAAGAAGCCAGAAGAGCC
AAGGCGGCGGAGGCGGCGGCCTGCGCCGAGGAGGAAGCCTGTAGGAACAGGGCCGCCGCGGAGGCCTCCGACGCGGCGCC
GAGGAGGCCGTACTTGTCGGAGGCGTGGGAGGACGAGGAGACGGAGGTGAGGCGGGTGCTGAGCAACTTCAGGATCCCGG
CCGCCGCCGACGGCGCTGACCTCAAGGAGAACCTCCGGCTCTGGGCGCACACCGTGGCCTCCGCCGTCCGGTGAC-TGCT
TTGACCAAGA--------GCCCACCTTTTTTTCCCTTATGCCGTGCAGTGGGTGGAATGATGAACTGTAAATATTTTTTG
CCATGTGCATGCGCATCTTTTCAAGATATTCTAGCAGCAGCCTGCGTTAGTTTAGTCACGACAGTGTAAAATGTATTCAA
CGTTCAAATTCACGAACATGTAACTGAATATAGGCTCTTGCAAGCAACAAAGAGGAAATGTGAAAATA------------
---TTGAACCGGTTGACAGGCTGATCTGATATCATTGTTTGCGCGTCAGTGCCAAGAAAGCATTTCCGGTTGCTTTGAAG
CTAAGAATTCTTGCATAATTCCCTGTGAGCTTTTATCATGT-TGACATGACGTGATTGGGACGAACAATCT-AGAGCTGG
GTGCCGTTGATTTGTGGAAACCGAGGAAATA------------------------------------------AAATGAT
TCCATGCTGCCTCCCATGGTTTTGCACTTTTCACATCCGCCACAAGGCTCTCGCTCTATGGA-TTCCTTTTGGGAACCTC
TATGCAGGTTAATCACGTGACGACGTGCGGTCGATGGTATGTATCATTGGCTTTGCTAATTTATATTGCGAGTGGTTAGC
ACATTTTCCAGGAGTGCTAAAGTATTCACGAGATTAGCGCACGTGAACTGTGCGATGCACGCAGCGGATAGTAATTCTCT
G-TTGCTTGTAGGGTTTTTTTTTTTTTGAGGAATGAAGCCACTTTATTAATCAAATTCCACAGAAGGTGGGATACAAACT
GGATCATGTGGCTGGCCAAGCCAAACATGACGACCCGGAGCTAGGTTTCTAGCAAATTTTGCTAACCTATGAGCTTCGAC
ATTAACACTACGACTTTCAAAAATAAAGTTACAAAAAAAGGGGGCCGATCTAGATTTTATCTCATGAATGATTGCTCCGT
GGTGACCATTGCTGCCCTTCATGATGTCTTCCATCACCTGCTTGCAGTCGGAAGAGATGATGAATCTTTGGAGATGAAGA
TCTTCAGCAAGAAATAAAGCTTCC
>chr7B_1
CAATGTCCTCCAGCACTTTCTTCTCTTTGTTCTTTATATTTTCTTTGCGAAATTTCTCATAGCTCCTTAATAACCCTCTA
CTTTAGACGTCTACCTACGTAGCATTCATTAAGATAGATATGAGGCGATGAACAGCACTTGAACATCCCTTATGCTTGGG
TCCCGAAAGCTCAGCTGATGGGTGCGTCAATTCCTGATAAGAGTCTTCGTTATTTTCAGATATACGTACATCCCAAAAGC
ACGTACTCGGCGAACAATATGCAGTCGATGCATGTTCCGATGGATCTACTCCAGTTTGGACGGGTCGATTTCGGATGACA
AGAATGGGCCAACTGTTAGTTATACTCAATGCGGAGCTGGGGCCTGTCTCGTACCGTGCGATGACAGGGAACATGGACGA
GTCAGCAGGAAAGCAACCCCTCTTCTGCCTGGTGGTCCTCGACCAAGTCACCTCAGTATCTGCTAAACGACATGGATGGC
TTGGCCTCGAGCTCGCGTCTCATCCATTTTTAGTTGGCGGTTTGATTCACCTGTGGATCCGTCGTAAAAATGCCACAAAT
GCACCATAATCGGTCGTGTTCTCTATTGTTAGGGAGTGTCTTCAGAAAGCCTGATGTAATGTGTCCTCTTTTACGAGGGC
GGGTGGGCAATCTCAAAAACAAGGATTTTTTTTGTAGTAATACGTGTCTCATTAATAAAATAAAGATTCACTCACAAGCC
ATGTAAACATCAACATTACAAAACTGAAAAGATAGGATAACCTTATGAAAAAACAACGTATGTCCCTCTCCACTAAGGAA
AAGAAGACAGATCACCTTTTCACCCAAAGCTTGAGGCGGCTCCATCGCTGATCAGCAGCTTTACGGAATTTCAAAGTAGT
TTGCCTGAAGCAAAATCGTTGCCATTGAAAGAATTAGACCGGGGCAATGTGTTCCCAAACACGTCATCGAACTTTAGAAC
TGACACCCAGATAGCAACTGCACCGAATGATACGTAGGA---GTACGCCAGCACCACCGTATGAAATACCGCGGAGAATT
TCCGACCAGACGACACGGCCACAGATATCAGCTGAGATCGTCAGCACATGCTCGTACA-----AAATACGTGACGGCCAA
GTAGCCTCAGAAACTTCAACGCCCGCACGTTGCCCGCGTGTCGTGTTACTACCGTGTAATTGCACTTGCACACCACCCGG
ACCGGTCGACCGACGCGCTCTGCTGTGCTAGACC-----GGGCTGCGTTTTGCATATAAAA-CCTCGCCCGCCGCCGCTC
CCAACGCCCACCGCAGCCAGTCCCGTCGCGAAACCCAACGCGCGCGCACGCACGCTCCCTCTCTCTCTCCCCCCGAATGG
AGCGGCAGCCTCGGCCGCAGCTGGCCGT---GGCGGAGGAGGCCATCGCGCTCTACGACACCTACTGGTACCGCCGCCTC
GTGCTCAACGCCTACTCCCCTCCCGCGCCTCCC------CCGCCGGCGCCTGAGCGCGAGCAGCCGGAGCAGGCGCCGGC
GGAGGAGAGCAAGAGCCAGCTGCAGCGGGCTCCGTCCGGGCTGCAGCGGCACCGCCGGACGCGGAGCGACGAGGCCAAGG
CCGCCGCGTTCCACGGCCAGCTGGAGCCGCTCAAGATCCCCACCAGCCACCGCGCGAGGCTCGAGACCATCCTGTCCGGA
AAGGACGGCCTGGCCGCGCCGGAGCCGCTACCGGAGCGCCGGAGGCCGGAGGCGCGGCGGCCCGGCGGGAGGAGGCGGAG
GAGCCGCCGCGGGCGGAGCCTGTCGGAGCTGGAGTTCGAGGAGGTGAAGGGCCTGCAGGACCTCGGCTTCACCTTCTCCG
AGACCGAGGTCGACGCCGAGCTCGCGTCCATCGTGCCGGGGCTCAGGCGGCTGCGCGCGGAGGAAGAAGCCAGAAGAGCC
AAGGCGGCGGAGGCGGCAGCCTGCGCCGAGGAGGAAGCCTGTAGGAGCAGGGCCGCTGCGGAGGCCTCCGACGCGGCGCC
GAGGAGGCCGTACTTGTCCGAGGCGTGGGAGGACGAGGAGGCGGAGGTGAGGCGGATGCTGAGCAACTTCAGGATCCCGG
CCGCCGCCGACGGCGCTGACCTCAAGGAGAACCTCCGGCTCTGGGCGCACACCGTGGCCTCCGCCGTCCGGTGAC-TGCT
TTGACCAAGA--------GTCCACC-TTTTTTCCCTTTTGCCGTGCAGTGGGTGGAATGATGAACTGTAAATATTTTTTG
CCATGTGCATGCGCATCTTTTCAAGTTATTTTAGCAGCAGCTTGCGTTAGTTTAGTCACGACAATGTAAAATGTATTCGA
AGTTCAAATTCACGAACATGTAACTGAATACAGGCTCTTGCAAGCAACAAA-AGGAAATGTGAACGAGGGGGCGCAGAAA
TTTTTGATCCGATTGACAGGCTGATCTGATATCATTGTTTCGGTGTCAGTGGCAAGAAAGCATTTCCGGTTGCTTTGAAG
CTAAGAATTCTTGCATAATTCCTTGTCAACTTTTATCATCT-TGACATGACGTGACTGGGACGAACAATCC-AGAGCTGG
GTGCCGTTGATTTGTGGAAACCAGG-------------------------------------------------------
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>chr7A_743
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-------------------------CATCAACTGAGATCATGAGCACATACTCGTACAGTACAAAATACGTGACGGCCAA
GCAGTCTCAGAAACTTCTACGCCCGCGTGCAGCGT--------------TACCGTGTGATAGCAAAGCAACACCACCCGA
CA----CGCCCGACGCGCTAGGCTGGGCCAGTCGCTAGACCGCGCTCCGCTGTATATAAAA-CCTCGCCCGCCGCCGCGC
CAACGCCACCACAACCA-ACCCCCGCCGCGAGACCCAGCGCGCGC---CC------------CTCTCTCCCCCCAAATGG
AGCGGCAGCCTCGGCCGCACCTAGCCGTGGCGGCGGAGGAGGCCATCGCGCTCTACGACGCCTGCTGGTTCCACCGCCTC
GTGCTCAGCTCCTACTCCCCTCCCGCGCCTCTGACGCCGGCGCCGGCGCCTGAGCGGGAGCAGCCGGAGCAGCCGCCGGC
GGAGGAGAGCAAGAGCGAGCTGCAGCGGGCCCCGTCGGGGCTGCAGCGGCACCGCCGGACGCGGAGCGACGAGGCCAAGG
CCGCCGCGTTCCACGGCCAGCTGGAGCCGCTCAAGATCCCCAACGGCCACCGCGCGAGGCTCGAGACCATCCTGTCCGGG
AAGGACGGCCTGGCGGCGCCGGAGCCGCTGCCGGAGCGCCGGAGGCCGGAGGCGCGGCGGCCCGGCGGGAGGAGGCGCAG
GAGCCGCCGCGGGCGGAGCCTGTCGGAGCTGGAGTTCGAGGAGGTCAAGGGCCTGCAGGACCTCGGCTTCACCTTCTCCG
AGACCGACGTCGACGCCGAGCTCGCGTCCATCGTGCCGGGGCTCCGGCGGCTGCGGGCGGACGAAGAGGCCAGAAGAGCC
AAGGCGGCGGCGGCGGAGGCGGAGGCGGAGGAGGAAGCCTGCAGAAACAGGGCGGCCGCGGCGGCCTCCGACGCGGCGCC
GAGGAGGCCCTACTTGTCCGAGGCGTGGGAGGACGAGGAGGCGGAGGTGAGGAGGGTGCTGAGCAACTTCAGGATCCCAG
CCGCCGCCGACGGGGCCGACCTCAAGGAGAACCTCCGCCTCTGGGCGCACACCGTGGCCTCCGCCGTCCGGTGATTTGCC
TTGACCAAGATGGAGGCAGCCCAACTTTTTCC------TGCCGTGCCGTGGGTGGAATGATGAACTGTAAATATTTTTTG
CCATGTGCATGCGCATCTTTTCAAGTTATTTTAGCAGCAGCTTGCGTTAGTTTAGTCACGAGAATGTAAAATGTATTCAC
AACTCAGGTTCACGGCCATGCCTC-------------------------AAAATGAAATGTGAAAATG------------
---TCGATCCGAT-------------TGATATCATTGTTTCCGTGTCAGTGCCAAGAAAGCATTTCCGGTTGCTTTGAAG
CCAAGAATTCTCCCATAATTCGCTGTGAACTTTTATCATGTGTGACGTGACGTGATCGGGAGGAACAATCTAAGAGCCGG
GTGCCGTTGATTTGTGGAAACAAGGTAGCGGAGAAGGCCACTGGCCACCAGCTGCGTTGGTCCGAACGAAGGGAAATGAT
TCCATGTTGCCTGC-------------------CATCCGCCACAAGGCTCTCGTTCCGTGAGTTTCCTTTTGGGAACCTC
CATGCAGGTTAATCACGTGACGACGTGCGACCGATGGAATGG----TTGGGTTTGTTTATTTGTTGCTGAGTGA-TTAGC
ACATTTTCCATGAGCGCTAAAGTATTCAGGAGATTAG-GCACGTGAACTGTAAGATGCACGCAACGGATAGTAATTCGCT
GTTTGCTTGTAGG-------------------------------------------------------------------
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>SNPs
----------S--------------------------SS-----------------------------------------
-------------S----S--------S----------------S----S--S---------------------------
---------------------------------------------------------SS-S--S--------------S-
---------------S---S----SS-----------------------------------------S----S-------
-------------------------------S------------------------------S-----------------
-------------------------------------------------------S------------------------
----SS---------------------------S--S--S--S-S-----------------------------------
-------------S------------------------------------------------------------SS--SS
---SSSSSSSSS--------------------------------------------------------------------
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----------------------S--SS--SSSS-S-S--SSS-------S------S----S----------S-------
---------S--------------S-------S-------------------------------S---------------
----------------------------------------S-------------------------S-------------
-----S------------------S--------SSS-SS----------------------S-------S----------
------------------------------S-------------------------------------------------
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--S--------------------------S-S-S----------------------------------------------
-----------------------S-------------------------------S------------------------
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--------------------------------S-----------------------------------------------
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------------------S---------------------S---------------------------------------
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-------------------------------------S------------------------------------------
-------------------------S----S----------S---------------------S----------------
S-----------------------------S--------------------S---------------S------------
-------S---S----------------------------S--S------------------------------------
----------------------------S---------------------------------------------------
----------------------SS-S-SSSS-------------------------------------------------
------S-----S-SSSSSSSSSSSSSSSSSSS--------------------S--SS--SS------------------
S----------------------------SS------S---SSSSS----S----S-S----S-SSSSSSSSSSS-----
----------S---S-------------S--------S-------------SS----------S-------------S--
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_1001
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---------------------ATCGCCTGCACAGAATGACA---------------------------------------
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>reverse_2388
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-------------------------------------------------------------------ATTGAACCGGTTG
ACAGGCT-------------------------------------------------------------------------
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