>input_sequence_68604
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-----ATGGCGATGCCGCCTCCTCCTCCGCCTCCACTTTATCCTGCGACGGCCGGCGGCAAGCCTGAACGGAAGACGGTG
GAGCGCAATCGCCGCAACCAGATGAACGCGCTGTACTACCGCCTGGACACGCTCGTCCGCGCCGGCGGCGCTGCCCCTTC
TCCCGCAGTTCGTG--CACATGTTATATCGATTGACCGCATATGTATATGTGTTTTTATATACGCGCCACGCGC------
--ATGCATGCACTCATAGTGATGATTTTGTATGTACAGCCGGCGGCGGCGACTAGGCCTGACAGGCTCGGGGAGGCGGCG
GCGTACATAAGCCGGACGGCGGAGCGGGTGGAGAGGCTCAAAGATAGGAAGCGCGAGCTGACGGCGGCCAGGGCGGCGTC
GACAACCGAACTGGGCACCGGCTCTGGTTCCTCATCGGGGGCGGCGACCGTCATGGTGGAGGTTCAGCATCTTGGCTCCG
GTCTGCATGGCATCCTCGTCACCGGTGCCCCTCCCAGCGACGGCTCGATGTTCCACCGTGCCGTGCGCGCGGTGGAGGAG
GCCGGCGGCGAGGTGCAGAACGCGCACTTCTCCGTGGTCGGCGCCAGGGCTGTGTACACCATCCACACGCTGGTGAGCTC
GCGC---CGTTAACCATTTTAGACATTTTGGGTTACAATATGTCCTTCAAATGAATACAATCTAG-----CGTCATGATA
TCTTTAACGAGGAGCG--ATATCGATCTTGTAGGTTGGAGAACAGCAAGGCAGCATCGAGAGGGTGGTGCAAAGGCTCAA
GGAAACAGTACGTGGACGCTAA----------------------------------------------------------
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----------------------
>chr5D_1_TraesCS5D01G492700
GCATGCATCGATTGATGCATAAGCCGAGGGTTTAGCCTCCTTTACTAAAAACCTATGACTAAGTCGACTACTTCCACAAC
AACACCTTAAAGAAGAGATGAACATCATCGCGCCATCGTTGGCAAATCTAGGCAGAGACGACATGGACAAATATTTTCAT
CTG-GTTGCCAAGATCGACCAATGAAAACCAACACAACAACAAGTCAACAAAACTTTCAATAAGGTAACAATGCAAATTC
ATCACCATTCAGCTCGACCAATAAACGTGCGCCAAATACATTGATACACCTGCAGATGCGC-------CCTTGTTGTGGG
CATCGAGGGGTGTCACCCCTGCCGCAATGACCAGCGGAATTCG------CCGCCAACG----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------CCAAGTTCAGGTTGGGAT
GACATCATGTTCAACACACATTTCTGAATTAACAAAACTATTTGATTGGTATATGTATGTATATTTGGGTTTGCTAATTC
TCATCTAGATGAGAATCAACAAAGTCTCATCTAACTCCTACAT-------------------------------------
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--------------------------------------------------------CATTTGATTAATCAAATAAAAAAC
CCTGCACAAGTCCTCACGT-------------------------------------------------------------
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-----------------------------------------------AA-AA-------------------------ATC
AAATGGTGTAGAAGTTAGATGGGACTTGA---------------------------------------------------
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-----TTAATTCTCATC----TAGACTAGAGCTAGCCATACCAATC----------------------------------
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----TTTTTTTTT-TATCCGGTGGCAA-TTTATAGCCCTTCGACTAGACCATTTAAACCTCAACTATTTATC----ATAT
TCTAAAATGGACGGTGCTGAAACTAAGCTTGGCGGTGACAGAGCAACA-AGGTCATGGTCCTTGGTCTAAAAGCTAAAGA
AATTCTTAACTTCTCCTGGGTGTATTCCACATCAAACGACTCGGACGGATATTGACTAGCACAGTAGATGAACGTAAGTA
TA---------TATATATAGCTTGCACGGTGGAAGCCAAACGAGTATCACACCGGGCAACTAAGCGCGTGACCGTCTACG
AGCCACGGTGCGAACGTAAGTACACGTACATACACGCTGACCACGACCACGACC------GACCGCCAGCCCACCGTTGC
TCATCATGGCGATGCCGCCTCCTCCTCCGCCTCCACTTTATCCTGCGACGGCCGGCGGCAAGCCTGAACGGAAGACGGTG
GAGCGCAATCGCCGCAACCAGATGAACGCGCTGTACTACCGCCTGGACACGCTCGTCCGCGCCGGCGGCGCTGCCCCTTC
TCCCGCAGTTCGTG--CACATGTTATATCGATTGACCGCATATGTATATGTGTTTTTATATACGCGCCACGCGC------
--ATGCATGCACTCATAGTGATGATTTTGTATGTACAGCCGGCGGCGGCGACTAGGCCTGACAGGCTCGGGGAGGCGGCG
GCGTACATAAGCCGGACGGCGGAGCGGGTGGAGAGGCTCAAAGATAGGAAGCGCGAGCTGACGGCGGCCAGGGCGGCGTC
GACAACCGAACTGGGCACCGGCTCTGGTTCCTCATCGGGGGCGGCGACCGTCATGGTGGAGGTTCAGCATCTTGGCTCCG
GTCTGCATGGCATCCTCGTCACCGGTGCCCCTCCCAGCGACGGCTCGATGTTCCACCGTGCCGTGCGCGCGGTGGAGGAG
GCCGGCGGCGAGGTGCAGAACGCGCACTTCTCCGTGGTCGGCGCCAGGGCTGTGTACACCATCCACACGCTGGTGAGCTC
GCGC---CGTTAACCATTTTAGACATTTTGGGTTACAATATGTCCTTCAAATGAATACAATCTAG-----CGTCATGATA
TCTTTAACGAGGAGCG--ATATCGATCTTGTAGGTTGGAGAACAGCAAGGCAGCATCGAGAGGGTGGTGCAAAGGCTCAA
GGAAACAGTACGTGGACGCTAAGATCCCGTCGTGAACGA-GAAAATTCTCCTTAATCCCAGACAGAAACTAAACTATTTC
ATGTGAAACTGATTACAAATTTGTGTGCTGCATTGTAACGCTACTACAGTAGTAACGCTAGTCG----GCCAGCATGCAT
GCATGCATACATAGCGCGTGCAATTCTACTTGAGC-ATTAGCGTGTTGGCTATCAGTCAACGCGGCATGCAATGGTATAC
ACAGCTCAAAATGTGCTACAAAACCAGTAGCCCTATGCAGATTGCAGATGATCTACGAATATATGTGTGGTTTCTTATTG
TTCACGCTATTGAAAAAATTGTACTCTTACATCGAGTCTAATAAAG-AAGATATATGTATGTATATGCTATATCTCATGT
CTTACTTTTGGTGACTGTTTCGATCTACGACGTGTTGCAGGCCTTCACAGGGCCGTCTCCAATAATTTGGAGCCCTAAGA
CGAAATATAAATTGGGGCCC-TAAAATTTGATGAGTCGACTAAAATTCATGTGCCTGCTTGATATGGATGGATGTGTTAT
TCTCGTCCTTGAGCAGCCAAGTGAATGAAGTGCCGAGCGGCATGCTTTGCAGTTCTCGAACC------------------
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--------TAGAGAAGTAGAGATGCGGAACTTTGTACTTCAGCGGGCTAGAGTTGGACCGCGAAGACCGTGGTGGTGGCC
AGATCAGGATGGGGATGGGGTTAGGGGAATTGTTGGAAGCACGAGTGAGTTGGGCCGGGTG-CTCCGAGCGGTTTTGAGG
GTTTTTAAGGGGAAAACCGACATGGGGTGGAGGTGGGTGAGGCAGAAGAAGCGATCATGGAAAGGGCTTGAGTGAAATGC
TCAAGAGCGAGACAATTTTTTTTACCC-----TTCTATGATATAATTTTCGTTAAAAGTATACCGTTATGTACATACTTA
CAAGCAGAGTACATCTGCAGCCAACCAACTCCAGGTTTCTCTGACATGAGAAACATCAAATAGAAACAGAATCAAATCAA
TTCAAGTATGCAATTCACTGAC
>chr5B_46
---------------------------------------------TAAATACCTATGACTAAGTCGATTTCTAACACAAA
AATGCCTTAAAGAAGATATGAACATCATCGCGCTATCGTCGCCAAGTCTAGCCAGAGACAACATTGACAAGGATTTCCAT
CCTAGTTGCCAAGATCGATCAATGAAG--CAACACAACAACAAGTCAACAAAACCTTCAATAAGGTAACAATGCAAATTC
ATCACCTTTCAGTTCGACCAATAAAGGTGGGCCAAATACATCGATGCGCGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAATGACCCAAGTTCAGGTTGGGAT
GACATCATGTTCAACGCACATTT-TGAATTAATAAAACTATTTGATTGGTATATGTATCTATATTCGGGTTTGCTAATTC
TCATCTAGATGAGAATCAAAAAAGTCTTATCTAACTCCTGCAT-------------------------------------
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--------------------------------------------------------CATTTGATTAATTAAACAAAAAAA
CCTACACAAATCTTCATGT-------------------------------------------------------------
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-----------------------------------------------AA-AA-------------------------ATC
AAATGGTGTAGAAGTTAGATGGGACTTGA---------------------------------------------------
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-----TTAATTCTCATGTAGA---ACGAGAGCTAGCCACTCCAATCC---------------------------------
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---ATATTTTTTT-CATCCGGTGGCAA-CGCACTGCCATTTAACTAGAGCATTT--ACCTCAATTAATTATC----ATAT
TCTTAAATGGACGGTGCTGAAACTCAGCTTGGCGGTGACAGAGCAACA-AGGTCGTGGTCCTTGGTCTAAAAGCTAAAGA
AATGCTTAACTTCTCCTGGGTGCATTCCACGTCAAACGACCCCGGAGGATATTGACTAGCACAGTAGATGAACCCACTTC
GCA--AAGCCCTATATATAGCTTGCACGGCCGAAGCCGAACGAGTATCACACCGGGCAACTAAGCGCGTGACCGTCTACG
AGTCATTGTGCGAACGTAAGTATACGTACATACACGCTGACCACGACCACGACC------GACCGCCAGCCCACCGA---
TCATCATGGCGATGCCCCCTCCTCCTCCGCCTCCTTTTCATCCTGCGACGGCCGGCGGCAAGCCTGAACGGAAGACGGTG
GAGCGCAACCGTCGCAACCAGATGAACGCGCTGTACTACCGCCTGGACACGCTCGTCCGCGCCGGCGGCGCCGCCCCTTC
TCCCGCAGTTCGTG--CACATTTTACATCGATTGACCTCATATGTATATGTGTTTATATATACGCACCACGCGC------
--ATGCACGGACTC--A-TGATGTTTATGTATGTACAGCCGGCGGCGGCGACGAGACCTGACAGGCTCGGGGAGGCGGCG
GCATACATAAGCCAGACGGCGGAGCGGGTGGAGAGGCTCAAAGATAGGAAGCGCGAGCTGACCGCGGCCAGGGCGGCATC
GACGACCGAGCTGGGCTCCGGCTCTGGTTCCTCGTCGGGGGCGGCGACCGTCGTCGTGGAGGTTCAACATCTTGGCTCGG
GTCTGCACGGAATCCTCGTCACCGGTGCCCCTCCCAGCGACGGCTCGATGTTCCACCGTGCCGTGCGCGCGGTGGAGGAG
GCCGGCGGCGAGGTGCAGAACGCACACTTCTCCGTGGTCGGCGCTAGGGCCGTGTACACCATCCACACGCTGGTGAGCTC
GCGC---CGTTAACCA--TTAGACATTTTGGGTTACAATATGTCCTTCAAATGAATACAATCTAG-----CGTCATGATA
TCTTTAACGA--------ATATCGATCTTGTAGGTTGGAGAGCAGCAGGGCAGCATCGAGAGGGTGGTGCAAAGGCTCAA
GGAAACAGTACGTTGACGCTAAGATCCCGTCGTGAACGA-GAAAATTCTCCTTAATCCCAGACAGAAACTAAACTATTTC
GTGTGAAACTGATGACAAATTTGTGTGTTGCATTGTAGTGCTACTACAGTAGTAACGCTAGTCG----GCCAGCATGCAT
GCATGCATACATAGCGCGTGCAATTCTTCTTGAGAAATTAGCGTGTTGGCTATCAGTCAACGCGGCATGCATTGGTTTAC
ATAGCTCAAGATGTGTTACAAAACCAGTAGCCCTATGCAGATTGCAGATGATCTACGAATATATGTGTGGTTTCTTATTG
TTCACGCTATTGAAAAAATTGTACTCTTACATCGAGTCTAATAAAG-AAGATATATGTATGTATATGCTATATCTCATGT
CTTACTTTTGTTGACTGTTTTGATCTACGACATGTTGCAGGCCTTCGTAGGGCCGTCTCCAATAATTTGGAGCCCTAAGA
CGAAATATAAATTGGGG-CC-TAAAATTTGACGAGTCAACTAAAATTCATGTGCCTGCTCGATATAGATGGATGTGTTGT
TCTTATCCTTGAGCAGCCAAGTGAATGAAGTGCCAAGTGGCATGCTTTGCAGTTCTCGAACC------------------
--------------------------------------------------------------------------------
--------TAGAGAAGTAGAGATGCGGAACTTTGTACTTCAGCGGGTTAGGGTTAGAACGTGGAGACCGTGGTGGTAGCC
AGATTGGGATGGGGATGTGGTTAGGGAAATTGGTGGAAGCACGAGTGAGTTGGACCAGGTGGCTCCAAGATGTTTTGAGG
GTTTTTAAGGGGAAAACCGACATGGGATGGAGGTGGGTGAGGCAGAAGAAGTGATCATGGAGAGGGCTTGAGTGAAATGC
TCAAGAGCGAGACAATTTTTTTACCCCTAATGTTCTACGGTATAATTTTCGTAAAAGTATAAAAGTATA------ATTTG
CAAGTAGAGTACATCA----------AACTCCAGTTTTCTCTGACTTGAGAAACATCAAATAGAAATGGAATCAAATGAA
TTCAAGGATGCAATCCACT---
>chr5A_245
--------------------------------------------------------------------------------
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-----CATTGAGCCCGACCAAT-AAAGTGTGCCAAATACATTGATGCGTCACCACACCCCCTTGATCTCCTTGTTGTGGC
CA-CGAGGGGTGCCAGCCCTGCCGCAATGACCAACACAAGTCGCCGCCACCGTCACCG----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------CCAAGTCCAGGTTGGTAT
GACATCATGTTCAACACACATTTCTGAATTAACAAAACTGTTCGGTTGGTATATGTATTTATATTTGGGTTAGCTAATTC
TCAACTAGATGAGAATTAACAAAGTCTCATCTAACTTCTACTCCCTCTGTAAAGAAATATATGAGCATTTGTGTTTGATC
ACTACTTTGATTACCTGCACAGATTTATGCATGTTTTTATTTAATTAATCAAAGTATTGGCATGCCTGGAGAGAGTTTTT
TTTGTTTTAAAGTGAGGATGTATCCCTGGCCTCTGCATCTGGGCGATGCATATATCCATTTTATTAATTATTCACAAAGC
CCTTACAAGGTAATACATCAGTAAACCTGAAGCCACCATGTTGGCAACACTGTTGCTACTCCTATCCCCGTGATGAAGGG
GTGCCGAATGTCCGAGCCTAATACCAAACAGACATCACACCAACACCTAACATGTAATGCCGGATGCCCCATTCAAGCCA
CAATACTTGGACTAGGTTACTGATGTCTACTACACAACCTTCTTCTTGTAGACGTTGTTGGGCCTCCAAGTGCAGAGATT
TGTAGGACAGTAGCAAATTTCCGTCAAGTGGGTGACCTAAGGTTTATCAATCCGTGGGAGGCGTAGGATGAAGATGGTCT
CTCTCAAACAACCCTGCAACCAAATAACAAAGACTCTCTTGTGTCCCCAACACACCCAATACAATGGTAAATTGTATAGA
TGCACTAGTTCGGCGAAGAGATGGTGATACAAGTACAATATGGATGGTAGATATAAGTTTTTGTAATATGAAAATAAAAA
TAGCAAGGTAACTAATGATAAAAGTGAGCATAAATGGTATTGCAATGCGTTGAAACAAGGCCTAGGGTTCATACTTTCAC
TAGTGCAAGTTATCTCAACAATAATAACATAATTGGATCATATACCAATCCCTCAACATGCAACAAAGAGTCACTCCAAA
GTCACTAATAGCGGAGAACAAACGAAGAGATTATCGTAGGGTACGAAACCACCTCAAAGTTATTCTTTCTGATCGATCTA
CTCAAGAGTCCGTAGTAAAATAACACGAAGCTATTCTTTCCATTCGATCTATCTTAGAGTTCGTACTAGAATAACTCCTT
AAGACACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCAATGTCACGTCAAGTATTCGTGGGTTTGATTATACGA
TATGCATCACACAATCTCAAATTCATCTATTCAACCAACACAAAGAACTTCAAAGAGTGACCCAAAGTTTATACCGGAGA
GTCAAGACGAAAACGTGTGCCAACCCCTATGCATAAGTTCATGAGGTCACGGAACCCGCAAGTTGATCACCAAAACATAC
ATCAAGTAGATCACGTGAATATCTCATTGTCACCACAGATAAGCACATGCAAGACATACATCAAGTGTTCTCAAATCCTT
AAAGACTCAATCCGATAAGATAACTTCAAATGGAAAACTTAATCCATTGCAAGAGAGTAGAGGGGGAGAAACATCATAAG
ATCCAACTATAATAGCAAAGCTCGCGATACATCAAGATCGTGCCAAATCAAGAACACAAGAGAGAGAGAGAGAGAGATTA
GACACATAGCTACTGGTACATACCCTCAGCCCCGAGGGTAAACTACTCCCTCCTTGTCATGGAGAGCGCCGGGATGATAA
AGATGGCCACCGGAGAGGGATTCCCCCCTCCGACAGGGTGCCGGAACGGGTCTAGATTGGTTTTCGGTGGCTATGGAGGC
TTGCGGCAGCGGAACTCCCGATCTAGGTTATGTTCTGGAAGTTTGAGTATATATAAGAGGTGTTGGCGTCGGGAACAAGT
CAGGAGGGTCCCCGAGGCGGCCACGAGGTAGGGGGGCGCGCCCAGGGGGTAGGGCGCCCCCCAAACTCGTGGGTGCCTCG
GGACTCTTCTGGCCCATCTCCGATACTCCGTGGGCTTCTTCTAGTCCAAAAATAATCTCCGTGAATTTTCAGGTCAATTG
GACTCCGTTTGGTTTTTCTTTTCTGCGATACTCAAAAACAAGGAAAAAACAGAAACTGGCACTGGGCTCTAGGTTAATAG
GTTAGTCCCAAAAATCATATAAAATAGCATATAAATGCATATAAAACATCCAAGATGGATAATATAATAGCATGGAACAA
TAAAAAATTATAGATATGTTGGAGATATATCAGTTACACACCGGTTCGGCCACTTTCAGTGGGCACCACATATGCATGCT
GCATGGGCCGTTACCTCCTTCATCCATCGATCCATCCTCAGATCAGATACTGACGCATCGGCCTTGCCAGGCCTCTCTGC
CATCGACGCCACCACGACGCCAGACAACGTCGTCCTCCCGCACGAGTCCATCGCCACCCATCGGACACCGAGTCTCCACT
GTGCCATGCCGCCGAGATCCGCCGCCATCGATGTGTAGGATGAAGCGCCGCTCCACCACCTACCGATGCCCAACCAACAA
GCCGTCCACATATTCGTCCAACCGATGAATGTATCCAAAGATGATGGCCCCACGGGGGTGACGTCGAAGACGTCGCCATC
ATCTGATCCGGGAGGCCCCTCAACGCCTCCAACGAGGGCTACGACGCCCACGGGCGCCACCGTCAATGGTAGCCTCCTCC
ATATCTGAGGTTTCCCTGGGAAACAGTGGAGTGAGGGACACCCCACCATCGCCTCCAACGAGGAAAACGACACCCACGGG
CGCTGCCGATGATGGTGGCATCCACACCCACTTCAGCAGTTAGGCCACCATCTCCTCCTCCAGTTGATCCGCCGCCGGGA
AGCCACCGTGAGGCAACACCCACCGACTAGATCCCTTTGGACCGACGATGAAGATAGCCAAAGGTAGAGGAGATCACATC
GCTGCGTGGCCGGCGCCATGGCCACACACACGTCGTCCCGAGGCGCCCGCTCAAGATCCACCATCACAGCCACAACTTCA
TATCGCCACGAAGGGACGCCCGGCCGCCATCATCCCACTGCATGGGCTTTGCCCAGCCGGGATCCGGCGGCGGCGGGAGG
GGAGGCAGAGGGGAGGGGAGGCGGATGAGAGAGTTATGCACTGGAGAGAGTTATGCGCTAGAGAGAGTGCATAACCCATC
CATATTTTTTTTT-CATCCGGCGGCAA-CGCATTGCCACTCAACTAGAGCATTT--ACCTCAATTAATTAATTATTATAT
TCTTAAATGGACGGTGCTGAAACTAAGCTTGGCGGTGGCAGAGCAACTGAGGTCATGGTCCTTGGTCTAAAAGCTAAAGA
AATGCTTAACTTCTCCTGGGTGCATTCCACATCAAACGACTCCGGCGGATATTGACTAGAACAGTAGATGAACCCACCCG
TTCGCAAGCCCTATATATAGCTTGCACGGCCGAAGCCGAACGAGTATCACACCGGGCAACTAATCGCGC------CTACG
AGCCACGGTGCGAACGTAAGTATACGTACATACACGCTGACCACGACCACGACC------GACCGCCAGCACACCGTTGG
TCATCATGGCGATGCCGCCTCCTCCTCCGCCTCCACTTTAT-CTGCGACGGCCGGCGGCAAGCCTGAACGGAAGACGGTG
GAGCGCAACCGCCGCAACCAGATGAACGCGTTGTACTACCGCCTGGACACGCTCGTCCGCGCCGGCGGCGCCACCTCTTC
TCCCGCAGTTCGTGCACACAATTTATATCAATTGACGTCATATGTATATGTTTTTATATATACGCGCCACACGC------
--ATCCATGCACTC--AGTAATGATTTTGTATGTACAGCCGGCGGCGGCGACGAGGCCCGACAGGCTCGGGGAGGCGGCG
ACGTACATAAGCCAGACGGCGGAGCGGGTGGAGAGGCTCAAAGATAGGAAGCGCGAGCTGACCGCGGCCAGGGTGTCATC
GACGACCGAGCTGGGCTCCGGCTCTGGTTCCTCGTCGGGGGCGGCGGCCGTCGTGGTGGAGGTCCATCATCTTGGCTCGG
GTCTGCACGGCATCCTCGTCACCGGTGCCCCTCCCAGCGACGGCTCGATGTTCCACCGTGCCGTTCGCGCGGTGGAGGAG
GCCGGCGGCGAGGTGCAGAACGCGCACTTCTCCGTGGTCGGCGCTAGGGCCGTGTACACCGTCCACACGCTGGTGAGCTC
GCAC---CGTCAACCA--TTAGACATTTTGGATTACAATATGTCCTTCAAATGAATACAATCTAG-----CGTGATGATA
TCTTTAACGAGGAGAG--ATATCGATCTTGTAGGTTGGAGAGCAGCAGGGCAGCATCGAGAGGGTGGTGCAAAGGCTCAA
GGAAACAGTACGTGGACGCTAAGATCCCGCCGTGAACGA-GAAAATTCTCCTTGATCCCATACAGAAACTAAATTATTTC
ATTTGAAACTGATTACAAATTTGTGTGTTGCATTGTAACGCTACTACAGTAGTAACGCTAGTCGATCGGCCAGCATGCAT
GCATGCACACATAGCGCGTGCAATTCTACTTGAGCAATTAGCGTGTTGGCTATCAGTCAACGCG-CATGCAATGGTATAC
ATAGCTCAAAATGTGTTACAAAACCAGTAGCCCTATGCAGATTGCAGATGATCTACGAATATATGTGTGGTTTCTTATTG
TTCATGCTATTGAAAACTTTGTACTCTTACATCGAGTATAATAAAAAAAGATATATGTATGTAT--GCTCTATCTCATGT
CTTACTTTTGGTGACTATTTTGATCTAGGACGTGTTGTAGGCGTTCACAGGGCCGTCTCCATTAATTTGGAGCCCTAAGA
CGAAATATAAATTGGGG-CCCTAAAATTTGACGAGTCGACTAAAATTCATGTGCCTGCTTGACATAGATGGATGTGTTGT
TCT-GTCCTTGAGTAGTCAAGTAAATGAAGTGCCGAGCGGCATGCTCTACAGTTCTCCAAACCTACTCCCTCCGTTTCGA
ATTATTTGTCGCGGGTATGGATGTATCTAGATGTATTTTAGTTTTAGATACATCCATTTCTGCGACGAGTAATTTGGAAC
AGAGAGAGTAGAGAAGTAGAGGTGCAGAATTTTGTACTTCAGCGGGCTAGGGTTAGACTGTGGAGACTGTGGTGGTGGCC
AGACC------GGGATGGGGTTAGGGGAATTGGTGGAAGCACGAGTGAGTTGGACTGGGTGGCTCCGAGTGGTTTTGAGG
TTTTTAAGGG-GAAAACAAACATGGGGTGGAGGTGGGTGAGGCAGAAGAAGCAGTCATGGAAAGGGCTTGAGTGAAATGC
TTAAGAGCGAGATTA-TTTTTTACTCCGAATGTTCTACGGTATAATTTTTGTTAAAAATATAAAGTTATGTACATATTTA
CAAGCAGAGTACATCTGCAGCTAACCAACTCCTGTTTTCTTTGACATGAGAAACATCAAATAGAAACAGAATCAAATCAA
TTCAGGGATGCAATCCACT---
>chr5D_482
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-------------------CAAATCCTCATCTGACTCCTACGT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CATTTAATAATTAA----------
-------------TCATGT-------------------------------------------------------------
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-----------------------------------------------AA-AAAAACCTGTGCAAATCTTGGCGTAAAATC
AAATGGTGTAGAAGTTAGACGAGACATGG---------------------------------------------------
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-----TTAATTCTCATCTGGATAGATGAGAGCTAGCCACACCAATCC---------------------------------
--------------------------------------------------------------------------------
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---ATATTTTTTT-CATCCGGTGACA---------------AACTAGAGCATTT--ACCTCAACTATTTATC----ATAT
TCTTATATGGACGGTGCTGAAACTAAGCTTGGCGGTGACAGAGCAACA-AGGTCATGGTCCTTGGTCTAAAAGCTAAAGA
AATGCTTAACTTCTCCTGGGTGCATTCCACATCAAACGACTCGGGCGGATATTGACTAGCACAGTAGATGAACATAAGC-
-A---------TATATATAGCTCGCACGG-CGAGGCCGAACGAGTATCACACCGGGCAACTAAGCGCGTGACCGTCTACG
AGCCACGGTGCGAACGTAAGTATACGTACATACACGCTGACCACGACCACGACC------GAACAGCCCGCC------GG
TCATCATGGCGATGCCGCCTCCTCCTCCGCCCCCTCTTCATCCTGCGACGGCCGGCGGCAAGCCTGAACGGAAGACGGTG
GAGCGCAACCGCCGCAACCAGATGAACGCGTTGTACTACCGCCTGGACACGCTCGTCCGCGCCGGCGGCGCCGCCCCTTC
TCCCGCAGTTCGTGCACACATTTTATATCGATTGACCTCATATGTATATGTGTTTATATATACGCGCCACGCGC------
--ATGCATGCACTCATAGTGATGATTTTGTATGTACAGCCGGCGGCGGCGACTAGGCCTGACAGGCTCGGGGAGGCGGCG
GCGTACATAAGCCGGACGGCGGAGCGGGTGGAGAGGCTCAAAGATAGGAAGCGCGAGCTGACGGCGGCCAGGGCGGCGTC
GACAACCGAACTGGGCTCCGGCTCTGGTTCCTCATCGGGGGCGTCAACCGTCGTGGTGGAGGTTCAGCATCTTGGCTCCG
GTCTGCACGGCATCCTCGTCACCGGCGCCCCTCCCAGCGACGGCTCGTTGTTCCACCGCGCCGTCCGCGCGGTGGAGGAG
GCCGGAGGCGAGGTGCAGAACGCGCACTTCTCCGTGGTCGGCGCCAGGGCCGTGTACACCATCCACACGCTGGTGAGCCA
GCTCGCGCGTCAACCA--TTAGACATTTCGGATTACAATCTGTCCCTCTCTCCAAATATGATCTAGCGTACATGATGATA
TCTTTAACGAGGAGCTATATATCGATCTTGTAGGTTGGAGAGCAGCAGGGCAGCATCGAGAGGGTGGTGCAAAGGCTCAA
GGAAACAGTACGTGGACGCTAAGATCCCGTCATGAACGAGGGAAATTCTCCTTAATCCCAGACAGAACA-AAACTATTTC
ATGTGACACTGATTCCAGATTTGTGTGCTGTATTGTA-------------------------------------------
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----------------------
>chr5B_482
--------------------------------------------------------------------------------
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-------------------CAAAATCTCATCTGACTCCTACGT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CATTTAATAATTAA----------
-------------TCATGT-------------------------------------------------------------
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-----------------------------------------------AAAAAAAACCTGCGCAAATCTTGGCGTAAAATC
AAATGATGTAAAAGTTAGATGGGACTTGG---------------------------------------------------
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-----TTAGTTCTCAAAGGGACAGATGAGAGCTAGCCACACCAATCC---------------------------------
--------------------------------------------------------------------------------
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---ATATTTTTTTTCATCCGGTGGCAG-CGCACTGCCATTTAACTAGAGCATTT--ACCTCAATTAATTATC----ATAT
TCTTAAATGGACGGTGCTGAAACTGAGCTTGGCGGTGACAGAGCAACA-AGGTCATGGTCCTTGGTCTAAAAGCTAAAGA
AATGCTTAACTTCTCCTGGGTGCATTCCACATCAAACGACTCGGACGGATATTGACTAGCACAGTAGATGAACGTAAGC-
-A---------TATATATAGCTCGCACGGCCGAAGCCGAACGAGTATCACACCGGGCAGCTAAGCGCGTGACCGTCTACG
AGCCGTCGTGCGAACGTAAGTATACGTACATACACGCTGACCACGACCACGACCACGACCGAACAGCCCGCC------GG
TCATCATGGCGATGCCACCTCCTCCTCCGCCTCCTTTTCATCCTGCGACGGCCGGCGGCAAGCCTGAACGGAAGACGGTG
GAGCGCAACCGTCGCAACCAGATGAACGCGCTCTACTACCGTCTGGACACGCTCGTCCGCGCCGGCGGCGCCGCCCCTTC
TCCCGCAGTTCGTGCACACATTTTATATCGATTGACCTCATATGTATATGTGTTTATATATAAGCGCCACGCGC------
--ATGCATGCACTCATAGTGATGATTTTGTATGTACAGCCGGCGGCGGCGACTAGGCCTGACAGGCTCGGGGAGGCGGCG
GCATACATAAGCCAGACGGCGGAGCGGGTGGAGAGGCTCAAAGATAGGAAGCGCGAGCTGACCGCGGCCAGGGCGGCATC
GACGACCCAGCTGGGCTCCGGCTCTGGTTCCTCGTCGGGGGCGGCGACCATCTCCGTGGAGGTTCAGCATCTTGGCTCGG
GTATGCACGGCATCCTCGTCACCGGCGCCCCTCCCAGCGACGGCTCGATGTTCCACCGCGCCGTGCGCGCGGTAGAGGAG
GCCGGCGGCGAGGTGCAGAACGCGCACTTCTCCGTGGTCGGCGCCAGGGCCGTGTACACCATTCACACGCTGGTGAGCCA
GCTCGCGCGTCGACCA--TTAGACATTTTGGATTCCAATCTGTCCCTCTCTCCAAATATGATCTAGCGTACGTGATGATA
TCTTTAACCAGGAGCTATATATCGATCTTGTAGGTTGGAGAGCAGCAGGGCAGCATCGAGAGGGTGGTGCAAAGGCTCAA
GGAAACAGTACGTGGACGCTAAGATCCCGTCATGAACGAGGGAAATTCTCCTTAATCCCAGACAAAAACCGAACTATTTC
ATGTGAGACTGATTCCAGATTTGTGTGCTGTATTG---------------------------------------------
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>chr5A_597
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---------------------TAGATGAGAGCTGGCCACACCAGTCC---------------------------------
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---ATATTTTTTTTCATCCGGTGGCAACCGTACTGTCATTTAACTAGAGCATTT--ACCTCAATTAATTAATTATTATAT
TCTTAAATGGACGGTGCTGAAACTAAGCTTGGCGATGGCAGAGCAACA-AGGTCATGGTCCTTGGTCTAAAAGCTAAAGA
AATGCTTAACTTCTCCTGGGTGCATTCCACATCAAACGACTCGGGCGGATATTGACTAGCACAGTAGATGAACGTAAGC-
-A---------CATATATAGCTTGCACGGCCGAAGCCGAACGAGTATCACGCCGGGCGGCTAAGCGCGTGACCGTCTACG
AGCCGTCGTGCGAACGTAAGTATACGTACATACACGCTGACCACGACCACGACC------GAACAGCCCGCC------GG
TCATCATGGCGATGCCGCCTCCTCCTCCGCCCCCTCTTCATCCTGCGACGGCCGGCGGCAAGCCTGAACGGAAGACGGTG
GAGCGCAACCGCCGCAACCAGATGAACGCGTTGTACTACCGCCTGGACACGCTCGTCCGCGCCGGCGGCGCCGCCCGTTC
TCCCGCAGTTCGTGCACACATTTTATATCGATTGACCTCATATGTATATGTGTTTATATATACGCGCCACGCGCCCACGC
GCATGCATGCACTCATAGTGATGATTTTGTACGTACAGCCGGCGGCGGCGACTAGGCCTGACAGGCTCGGGGAGGCGGCG
GCGTACATAAGCCGGACGGCGGAGCGGGTGGAGAGGCTCAGAGATAGGAAGCGCGAGCTGACGGCGGCCAGGGCGGCGTC
GACAACCGAACTGGGCTCCGGCTCTGGTTCCTCATCGGGGGCGGCAACCGTCGTGGTGGAGGTTCAGCATCTTGGCTCCG
GTCTGCACGGCATCCTCGTCACCGGCGCCCCTCCCAGCGACGGCTCGTTGTTCCACCGCGCCGTGCGCGCCGTGGAGGAG
GCCGGCGGCGAGGTGCAGAACGCGCACTTCTCCGTGGTCGGCGCCAGGGCCGTGTACACCATCCACACACTGGTGAGCCA
GCTCGCGCGTCAACCA--TTAGACATTTCGGATTACAATCTGTCCCTCTCTCCAAATATGATCTAGCGTCCGTGATGATA
TCTTTAACCAGGAGCTATATATCGGTCTTGTAGGTTGGAGAGCAGCAGGGCAGCATCGAGAGGGTGGTGCAAAGGCTCAA
GGAAACAGTACGTGGACGCTAATATCCCGTCATGAACGAGGAAAATTCTCCTTAATCCCAGACAGAAACCAAACCATTTC
ATGTGAGGCTGATTCCAGATTTGTGTGCTGTATTGTA-------------------------------------------
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----------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----------------S-S--SS-----S
--SS------------S----------------S-----S-S---S-----S-------S----S-----SS----S---
-SS---------------S-------SSS-------------------------S-------------------------
-------------------------S---S---------------S-S------S-SS-S-------------------S
--S---------S--S-----------------S-SS--S------------S--S------------------------
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----------------------------------------------------------S---------------------
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--------------------------------------------------------------------S---S-------
---S--------S---S---------------------------------------------------------------
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--------------------------------------S-----------------------------------------
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--------------S-------------SS---S---S---S------S-----SS------------------------
---S----------------------------------------------------------------------------
---S------------------S--------------------------------------------------------S
-----------------------------SS------S------------------------------------------
----------------------S--------------------------------------------------------S
--------------------------------------------------------------------------------
--------S--------------------------------------------------------------S--------
---------------------S---------------S-----------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-----------------------------------S---------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
----------------SS--------------------------------------------------------------
-----------------------------------------S-----S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
-----------------S-------------S---------------------------------S------------S-
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S---S-----S-S-----------------
-----S--------------------------S--------------------S---------------S----------
--------------------------------------------------------------------------------
----------------------SS-------------S-S-----------------S----SS------------S---
---------------------S------------S---------------------------------------------
------S-------S----SSS
>forward_977
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-----------------------------------------------------------------------------AAC
CCTGCACAAGTCCTCAC---------------------------------------------------------------
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>reverse_5519
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------------------------------------------------------------------------------AT
TCTCGTCCTTGAGCAGCC--------------------------------------------------------------
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----------------------
