>input_sequence_68570
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----------------------------------------------------------------------------ATGG
CGGGCGCGACCATGGCGCTCTCCTCCCCGGCGATGGCGGGCACCCCGGTGAAGGCCTCCAGGG---CGGCGCCCTTCGGC
GAGGGCCGCATCACCATGCGCAAGACGGCGGGCAAGCCCAAGGTGGCGGCGTCCAGCAGCCCGTGGTACGGCTCCGACCG
CGTGCTCTACCTCGGCCCGCTCTCCGGCGACCCCCCGAGCTACCTCACCGGCGAGTTCCCCGGCGACTACGGCTGGGACA
CCGCGGGCCTCTCCGCCGACCCCGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATCCACTGCCGCTGGGCCATGCTC
GGCGCGCTCGGCTGCGTCTTCCCGGAGCTGCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGG
CTCCCAGATCTTCAGCGAGGGCGGCCTCGACTACCTCGGCAACCCCAGCCTGGTGCACGCGCAGAGCATCCTCGCCATCT
GGGCCTGCCAGGTGGTGCTCATGGGCGCCGTGGAGGGCTACCGCGTCGCCGGCGGCCCGCTCGGCGAGATCGTGGACCCG
CTCTACCCCGGCGGCAGCTTCGACCCCCTGGGCCTCGCCGAGGACCCCGAGGCGTTCGCGGAGCTCAAGGTGAAGGAGAT
CAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGGCCCCTGGAGA
ACCTCGCCGACCACCTCGCCGACCCCGTCAACAACAACGCCTGGGCCTTCGCCACCAACTTCGTCCCCGGCAAGTGA---
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------------------------------------------------------------------------------
>chr5B_1_TraesCS5B01G353200
GTATAAACTACAGTTTTGCTAAAGCACATCTAGATGTGCCATAAGTATTGCACAACTAAGTCCTATGTCTCTGCTCTTAT
GCCGAGATTCGTGTGAATATTTTCTTTTTCTTTTTTCCCCTCTTTATACTTGATTCAGTCACTTAAATGTGCAATAATTA
AAGCACATCTAAATGTGTCCTAGACGAAAAAGTAATAATGTTTTTTGATATTTCGTTTCAGGCAATGATGGTGAAACATC
GGACTTGTCCACAATACCCACATGTGATATTTAGTCATCTTTCGGTCATTCCAGCGTATCCTACTACTCTGGT-------
----------TAGCGATTGGCCATC---CCCAGCCCAGATATGTTGATTTCACCATGTATTTGTGTGAATAAGATCCGAC
AAGTATTTTCGGACGGAGAAAATACTATAAGATGCAAGAAATCAGATTATTGCGGTTACGATTGTGCACCTCGTGAGTCG
TGACACGAGTAGATGTCGGCCAGGTCGCCGGCAGAAGCAGCCAACGGCACG-ATCGATCTCC---CGGGGTCCTCCGGCC
AGCAGCTCGGCATCAGCAGCCCCAGAATGCACCGTGCGCAACGGCCAAAATCATCACCGTCCGTCCCCGCTCGCCCGGCC
CGGTGAGCAGGAGATCGCCTGGCCAGCGCGCGGCCACATCGGCGAGCCACCCCACACGCGGCCATGTGGGCTGCGGCCGC
GACCCACCCCGTCGCCCTCGCGGCTCATCTCCACCGCGCGGAATCCACCCGAACTCGGCAAAAATCCCAGGCTTCACCAC
TCCCGTGGCCAGCGCGCGGCCACCTCAGCCACCCCATCCGCCCGCCTCGCGCCCCGCGCGCCAATGGCGACTCGGCATAA
GATTCCCCGGGATAAGGACCCGATCGCGCCCGCCTCCTATTTAAACGCCGCGCGCTCCCGCTTCACTCCACAGCACCAAC
GACCACCAGCGCCTCC--------CACTGCCAGCCTCAGCTCACCCGAAGCAAAGCTAGCGAGTAGCAC----GCAATGG
CGGGCGCGACCATGGCGCTCTCCTCCCCGGCGATGGCGGGCACCCCGGTGAAGGCCTCCAGGG---CGGCGCCCTTCGGC
GAGGGCCGCATCACCATGCGCAAGACGGCGGGCAAGCCCAAGGTGGCGGCGTCCAGCAGCCCGTGGTACGGCTCCGACCG
CGTGCTCTACCTCGGCCCGCTCTCCGGCGACCCCCCGAGCTACCTCACCGGCGAGTTCCCCGGCGACTACGGCTGGGACA
CCGCGGGCCTCTCCGCCGACCCCGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATCCACTGCCGCTGGGCCATGCTC
GGCGCGCTCGGCTGCGTCTTCCCGGAGCTGCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGG
CTCCCAGATCTTCAGCGAGGGCGGCCTCGACTACCTCGGCAACCCCAGCCTGGTGCACGCGCAGAGCATCCTCGCCATCT
GGGCCTGCCAGGTGGTGCTCATGGGCGCCGTGGAGGGCTACCGCGTCGCCGGCGGCCCGCTCGGCGAGATCGTGGACCCG
CTCTACCCCGGCGGCAGCTTCGACCCCCTGGGCCTCGCCGAGGACCCCGAGGCGTTCGCGGAGCTCAAGGTGAAGGAGAT
CAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGGCCCCTGGAGA
ACCTCGCCGACCACCTCGCCGACCCCGTCAACAACAACGCCTGGGCCTTCGCCACCAACTTCGTCCCCGGCAAGTGAGCG
CGGTCAGCTCAACCTCTAGGCCGACAACTTCATGGCTGATGGATGCTGCTGCATGTGTGTCGTCGTCGATCTCTGCTTCT
TCCCGTTGTGAGATTGAGTAGTCCGGACTGATAGATGTTGCATGTGAGGGCGAGTCGAGATGAGGAGTTGGTGTGTGTAC
ACT--AAGATGGTGTTTGTGTAATATCTGGCTATTTTCTCAGATTAATCAAGGCATCTCTGTTCTTCTGCTTAACTTCTT
GGTTTCTCTGAACTTCTGAATGTCAAATACAGAAGTTCTCCGAATATTTTTCTGGAAGTCCAACCAGCTAAAGTATTCAA
ATTCATAAAGGCATT-CAGATCATCCATTTCAAG--------ACTGATCGACTCAACAATCCTGTAAATACAA-TTCCAT
TTGTACATATAACA--AATACTCTGCAAATCTAGGGTTTCCTACGGTAAAAAAAAAGAAGT-AAAA------TGGAAAGC
TAGGACTAGTGCAACTTCCTTCTG---AAGAAGAAAGTTGCAGTTAC-TACTGTG---------CTACCGGCCTTGCAGA
ACGGTCATGGCAATGGTATTCC----------------------------------------------------------
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-----------------------------TGCTGTTCTCGAGATCGGTCCTCTGGATCTTCTCTTCCATCATACCCAGGT
ACCCTGGCTGGTTCGGCGCCGGAAGAGACGCTGATGCCACCACTGGCGCGCTTCCATTCTCCAAGATGGACACGACGGAC
GACATGAGCGGCCTCCTGCTCGGGTCGTCTTGGACGCACAGGAGCCCGACGTGGATGCACAGCAATGCCTCATCCTTTGG
ACACCTCTCTGCCATGGAGGGATCCACCAGCTTGCCTGCCTTCCCTTCCCTCCACAGGTGCCATGCCTACATGAAACAAT
CAAATCAAATCATGCCTACATGAAACAATCAAATCAGCCATGTGAAACAATCAAATCATGACAGCTCTCTATCCGTCGTT
GGGACATAGTGCTTACATAGACTATCAGGCTAGGAAACTCCATGATGGCATAGGTTGTGCTTATCCTAATGCCGCTCA
>chr5D_231
--------------------------------------------------------------------------------
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----------------------------------------------------------------------GTGAAACTTC
AGACTTGTCCACAATACCAACATGTCATATTTAATCATCTTGCGGTTATTCCAGTGTATCCTACTACTCTGGAGCACTAG
ATACCACCAGTAGCAATTGGCCACATTACCCAGCCCAGATATGTTAATTTTACCATGTATTTGTGTGAACAAGAGATATG
---------------------------TAAGATGCAAGAAATCAGTTTATTGCGGTTACGATTGTGCACC-------TCG
TGACACGAGGTGATGTCGGCCACGTCGCCGGCAGAAGCAGCCAACGGCAAATATCGATCTCCCGGCGGGGTCCTCCGGCC
AGCAGCACGGCATCAGCAGCCTCAGAACGCACCGCGCGCAACGGCCAAAATCACCACTCTCCGTCCCCGCTCGCCCGGCG
CGGCGAGAAGGAGATCGCCTGGCCAGCGCGCGGCCACATCGGCGAGCCGCCCCACACGCGGCCATGTGGGCTGCGGCCAC
GACCCACCCCGTCGCCCTCGCGGCTCATCTCCACCGCGCGAAATCCACCGGAATCCTGCAAAAATCCCGAGCTTCGCCAC
TCCCGTGGCCAGCGCGCGGCCACCTCAGCCACCCCATCCGCCCGCCTCGCGCCCCGCGCGCCAATGGCGACTCGGCATAA
GATTCCCCGGGATAAGGACCCGATCGCGCCCTCCTCCTACTTAAACGCCGCGCGCTCCGGCTTCACTCCACAGCTCCAAC
GACCACCAGCGCCTCCTACAGTCCTACTGTCAGCCTCAGCTCGCCCGAAGCAAAGCTAGCGAGTACGCAGCGCGCGATGG
CGGCCGCGACCATGGCGCTCTCCTCCCCGGCGATGGCGGGCACACCTGTGAAGGCCTCCAGGG---CGGCGCCCTTCGGG
GAGGGCCGCATCACCATGCGCAAGACGGCGGGCAAGCCCAAGGTGGCGGCGTCCAGCAGCCCGTGGTACGGCTCCGACCG
CGTGCTCTACCTCGGCCCGCTCTCCGGCGACCCGCCGAGCTACCTCACCGGCGAGTTCCCCGGCGACTACGGCTGGGACA
CCGCGGGCCTGTCGGCCGACCCCGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATCCACTGCCGTTGGGCCATGCTC
GGCGCGCTCGGCTGCGTCTTCCCGGAGCTGCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGG
CTCCCAGATCTTCAGCGAGGGCGGCCTCGACTACCTCGGCAACCCCAGCCTGGTGCATGCGCAGAGCATCCTTGCCATCT
GGGCCTGCCAGGTGGTGCTGATGGGCGCCGTGGAGGGCTACCGCGTGGCCGGCGGCCCGCTGGGCGAGATCGTGGACCCG
CTCTACCCCGGCGGCAGCTTCGACCCCCTGGGCCTCGCCGAGGACCCCGAGGCCTTCGCGGAGCTCAAGGTGAAGGAGAT
CAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTCCAGGCCATCGTCACCGGCAAGGGCCCCCTCGAGA
ACCTCGCCGACCACCTTGCCGACCCCGTCAACAACAACGCCTGGGCCTTCGCCACCAACTTCGTCCCCGGCAAGTGAGCG
CAGTCAGCTCAACCTCTAGGCCGACAACTTCATGGCTGATGGATGCTGCTGCATGTGTGTCGTCGTCGATCTCTGCTTCT
TCCCGTTCTGAGATTGAGTAGTCCGGACTGATAGATGTTGCATGTGAGGGCGATTCGAGATGAGGAGTTGGTGTGTGTAC
ACTACAAGATGGTGTTTGTGTAATATCTGGCTATTTTCTCAGATTAATCAAGGCATCTCTGTTCTTCTGCTTAACTCCTT
GGTTTCTCTGAACCTCTGAATGTCAAATGCAGAAGTTCTATGAATGTTTCTCTGAAAGTCCAAGCAACTAAAGCATTCAA
ATTCATCAAGACATT-CATTCCATCCATTTCAAGTTTTCAACACTGATCAACTCAACAATCCTGTAAATACAA-TTCCAT
TTGTATATGTAACA--AATACTCTACAAATCTGGGGTTTCCTACAGTAAAAA-----AAGT-AAAA------TGAAACGC
TAGGACTAGTGCAACTTCCTTCTGATGAAGAAGAAAGTTGCAGTTAC-TACTGTG---------CTACCGGCCTTGCAGA
ACGGTCATGGCAATGGTGTTCC----------------------------------------------------------
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-----------------------------TGCTGTTCTCGAGATCGGTTCTCTGGATCTTCTCTTCCATCATTCCGACGT
ACCCTGGCTGGTTCGGCGCCGGGAGAGACGCCGATGCCACCACCGACGCGCTTCCGTTCTCCAAGATGGACACAACGGAC
GACATGAGGGGCCTCCTGCTCGGGTCGTCCTCCACGCACAGGAGGCCGACGTGGATGCAGAGCAATGCCTCATCCTGCGA
ACAGCTCTCTGCCATGGATGGATCCACCAGCTTGACTGCCTTCCCTTCCCTCCACAGGTGCCATGCCTACATGAAACAAC
CAAACCAA------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr5A_465
--------------------------------------------------------------------------------
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----ACGAGTAGATGTCGGCCACGTCGCCGGCAGAAGCAGCCAACGGCAAATATCGAACTCC---CGGGGTCCTCCGGCC
AGCAGC--------------CTCAGAAGGCACCGCGCGCAACGGCCAAAATCATCACCCTCCGTCCCCGCTCGCCCGGCG
CGGCGAGAAGGAAATCGCCAGGCCAGCGCGCGGCCACATCGGCGAGCCACCCCACACGCGGCCATGTGGGCTGCGGCCGC
GACCCACCCCGTCGCCCTCGCGGCTCATCTCCACCGCGCGAAATCCACCCGAACACTGCAAAAATCCCAAGCTCCCCCAG
CCCCGTGGCCAGCGCGCGGCCACCTCAGCCACCCCATCCGCCCGCCTCGCGCCCCGCGCGCCAATGGCGACTCGGCATAA
GATTCCCCGGGATAAGGACCCGATCGCGCCCTCCCCCTACTTAAGCGCCGCGAGCTCCCGCTTCACTCCACAGCACCAAC
GACCACCAGCGCC--------TCCCACTGCCAGCCTCAGCTCACCCGAAGCAAAGCCAGCTAGCACGCAGCGCGCGATGG
CGGCCGCGACCATGGCGCTCTCCTCCCCGGCGATGGCCGGCACCCCGGTGAAGGCCTCCAGGG---CGGCGCCCTTCGGC
GAGGGCCGCATCACCATGCGCAAGACGGCGGGCAAGCCCAAGGTGGCGGCGTCCAGCAGCCCGTGGTACGGCTCCGACCG
CGTGCTCTACCTCGGCCCGCTCTCCGGCGACCCCCCGAGCTACCTCACCGGCGAGTTCCCCGGCGACTACGGCTGGGACA
CCGCGGGGCTGTCGGCCGACCCCGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTCATCCACTGCCGCTGGGCCATGCTC
GGCGCGCTCGGCTGCGTCTTCCCCGAGCTGCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCCGTCTGGTTCAAGGCCGG
CTCCCAGATCTTCAGCGAGGGCGGCCTCGACTACCTCGGCAACCCCAGCCTGGTGCACGCGCAGAGCATCCTCGCCATCT
GGGCCTGCCAGGTGGTGCTCATGGGCGCCGTGGAGGGCTACCGCGTCGCCGGCGGCCCGCTGGGCGAGATCGTGGACCCG
CTCTACCCCGGCGGCAGCTTCGACCCCCTGGGCCTCGCCGAGGACCCCGAGGCCTTCGCGGAGCTCAAGGTGAAGGAGAT
CAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGCCCCCTCGAGA
ACCTCGCCGACCACCTCGCCGACCCCGTCAACAACAACGCCTGGGCCTTCGCCACCAACTTCGTCCCCGGCAAGTGAGCG
CCGTCAGCTCAAGCTCTAGGCCGACAACTTCATGGCTGATGGATGCTGCTGCATGTGTGTCGTCGTCGATCTCTGCTTCT
TCCCGTTCTGAGATTGAGTAGTCCGGACTGATAGATGTTGCATGTGAGGGCGAGTCGAGATGAGGAGTTGGTGTGTGTAC
ACTACAAGATGGTGTTTGTGTAATATCTGGCTATTTTCTCAGATTAATCAAGGCATCTCTGTTCTTCTGGTTAACTACTT
G-TCTCTCTGAACCTCTCAATGTCAAACACTGAAGTTGTCTGAATAATTTTCTGAAAGTCCTAGCAGCTAAAGTATTCAA
ATTCAGAAAGACATTTCATACCATCCATAATCCA-TTTCAAGACTGATCAACTCAACACTCCTGTAAATACAACTTCCAT
TTGTATATGTAACAAAAATGCTCTCCAAATCTGGGGTTTCCTGCGGTAAAAA-----AAGG-AAAAGAAAAATGGAAAGC
TAGGACTAGTGCAACTTCCTTCTGAAGAAGAAAGTTACTGTTACTACGTACTGTG---------CTACCGGCCTTGCAGA
ACAGTCATGGGAATGGTGTTCCTGCTGTTCGTTTCTCTGGATCTTCTCTTCCATCATTCCGTGGTACCCTGGTTGGTTAG
GCGCCGGGAGAGACGCGGATGCCACCACCGACGCGCTTCCGTTCTCCAAGATTGACGCGGTGGGTCTTTTTGATACCCAA
ACTCTTCTTTGGCGCCGGCGCCGGCGTGTGGGTGATTTTCGGCGCTGAAAAGCCTGCGCCGGTCGGTCATCGATGGGGCG
AGGGAAGGGGCCGGGCTAGCTATTCCGGCCGGCCGGTCAGTCATCGGTGACGGCGGCGGGGCGTGGCGGCTACGTCAGAC
AGGGTCAGTTTGATTCGTGACCTGACCCTCATGTTTGGATGGCCAGTATTGTTTGGTGTGGATGTGAAATGTAAAATATT
TCTGCCTGGCTAGGCTTGTGTGATCTGAATCGTTTGGTTCATGCCTGGACCAGGCAAAGCATTAACGTCTCATCAATCAA
TCCATGTAGCAATTATTTAATGTAAATATCCACCAGACTGTTGTTATCCTCGTGGCCGCACGGCTAGGCGTTCGAATTCG
GTCGCCTGGGCAAGGCTAATTGCAGTGCCTTGAGTCTAGCCAGGCTAATTGCAATGCAAAGGAATCCAGGCCAGGCGGGC
TTTTTTTTCATAGGGTAGCAACCAAACAAGCTTGCATGAAATTCAGGCACAACTCCAAGCCAGGCAAAAGATGCTTAGGT
CGCAACCCAAACTGGCCCACAGTGCTGCGCGGGAAGTGCGAGAGGGAGAGACGCCAGACTTACTCGGCCACGTCGGGAGG
GAGTATATTTAGGGAGATTTATGGAAAAATACGGAGGTGGCGTAAGATTTTTACTCCACTAAGACTTTTAAGGATCTGTA
CTCTCTTATGGCCTCTTAGGGGATCGAGTAGAAATGCCCTAGCATGGTAAAGATTTCAATTCAGCAAGACATTCTTATGA
TCCATTTCAAGGCTGATCAACTCAGCACTCCTGTAAATACGTCTTTCATTTCTCTCTGTGATAAATGCTCTACAAATCTG
GGGTTTTTTCCCCGGTAAAAAATAAATGGAACACTAGGACGAGTGCTGCTTCCCTGAAAAGGACTGCTGTACTACCGTCC
CTGAAGAGCGGTCATGGTCATGGCGTTCCTGGTGTTCTCGAGATCGCTACTCTGGCTCTTGTCTCCCATCATTTTAAGGT
ACCCTGGCTGGTTCGGCGCCGGAAGAGACGCGGATGCCACCACCGGCGCGCTTCCATTCTCCAAGATGGACACGACGGAC
GACATGAGCGGCCTCCTGCTCGGGTCGTCCTCGACGCAGAGGAGCCCGACGTGGATGCAGAGCATGGCCTCGTCCTGTGA
ACAGCTCTCTGCCATGGATGGATCCACCAGCTTGCCTGCCTTCCCTTCCCTCCACAGGCTCCATGCCTACATGAAGCAAT
CAAATCAA------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr7A_994
GCAGCAATGGC---------------------------------------------------------------------
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------------------------------------------------------------------------------GG
CCTCCACCACAATGGCGCTCTCCTCCCCCGCGATCAAGCTCGCCGGAGCCTCGTACGCGC---------------TCGGC
GGCGGCCGCGTCACCATGCGCAAGGCCGCGCCCAAGGCC------GCCGCCTCCAACAGCCCCTGGTACGGCCCCGACCG
CGTGCTCTACCTCGGCCCGCTCTCTGGCGAGCCCCCGAGCTACCTCAGCGGCGAGTTCCCGGGCGACTACGGGTGGGACA
CCGCGGGCCTCTCCGCCGACCCGGAGACCTTCGCCAAGAACCGCGAGCTCGAGGTGATCCACTGCCGCTGGGCCATGCTC
GGCGCGCTCGGCTGCGTCTTCCCCGAGCTGCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCCGTCTGGTTCAAGGCCGG
CTCCCAGATCTTCAGCGAGGGCGGCCTCGACTACCTCGGTAACCCTAGCTTGGTCCACGCTCAGAGCATCCTTGCCATCT
GGGCTTGCCAGGTCGTGCTCATGGGCGCTGTCGAGGGGTACCGCGTTGCTGGTGGCCCGCTCGGAGAGATCGTCGACCCA
CTCTACCCCGGTGGCAGCTTCGACCCCCTTGGCCTAGCTGACGATCCAGAGGCGTTTGCCGAGCTCAAGGTGAAGGAGAT
CAAGAACGGCCGCCTTGCAATGTTCTCCATGTTTGGATACTTTGTGCAGGCCATCGTCACCGGTAAGGGTCCGCTTGAGA
ACCTCGCTGACCACCTCGCCGACCCCGTCAACAACAACGCGTGGGCCTTCGCCACCAACTTTGTGCCCGGCAAGT-----
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------------------------------------------------------------------------------
>chr1A_998
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------GCAATGG
CGACCACCGCGATGGCGCTCTCCCCCTCGTCCTTCGCCGGGAAGGCGGTGAAGGACCTGCCGTCGTCGGCGCTCTTCGGG
GAGGCGCGCGTCACCATGCGCAAGACCGCGGCCAAGGCCAAGCCGGTGTCGTCCGGCAGCCCGTGGTACGGCTCCGACCG
CGTGCTCTACCTCGGCCCGCTCTCCGGCGACCCCCCGAGCTACCTCACCGGTGAGTTCCCCGGCGACTACGGGTGGGACA
CCGCGGGGCTGTCGGCCGACCCCGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATCCACTGCCGGTGGGCCATGTTG
GGCGCTCTCGGCTGCGTCTTCCCCGAGCTGCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGG
CTCCCAGATCTTCAGCGAGGGCGGCCTCGACTACCTCGGCAACCCCAGCCTCGTCCACGCGCAGAGCATCCTTGCCATCT
GGGCCTGCCAGGTCGTGCTCATGGGCGCCGTCGAGGGCTACCGCGTCGCCGGCGGCCCGCTCGGCGAGATCGTCGACCCG
CTCTACCCCGGCGGCAGCTTCGACCCCCTGGGCCTCGCCGACGACCCCGAGGCGTTCGCGGAGCTCAAGGTGAAGGAGAT
CAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGCCCCCTCGAGA
ACCTCGCCGACCACCTCGCCGACCCCGTCAACAACAACGCCTGGGCCTTCGCCACCAACTTTGTGCCCGGCAAGTAAGC-
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------------------------------------------------------------------------------
>chr7D_1013
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--------ACCATGGCGCTCTCCTCCCCCGCGATCAAGCTCGCCGGAGCCTCCTACGCCCTCGG------------CGGC
GGCGGCCGCATCACCATGCGCAAGGCCGCGCCCAAGGCC------TCCGCCTCCAACAGCCCGTGGTACGGCCCCGACCG
CGTGCTCTACCTCGGCCCGCTCTCCGGCGAGCCCCCGAGCTACCTCAGCGGCGAGTTCCCGGGCGACTACGGGTGGGACA
CCGCGGGCCTCTCCGCCGACCCGGAGACCTTCGCCAAGAACCGCGAGCTCGAGGTAATCCACTGCCGCTGGGCCATGCTC
GGCGCGCTCGGCTGCGTCTTCCCCGAGCTGCTCGCTCGCAACGGCGTCAAGTTCGGCGAGGCAGTCTGGTTCAAGGCGGG
CTCCCAGATCTTCAGCGAGGGCGGCCTCGACTACCTCGGCAACCCTAGCTTGGTCCACGCTCAAAGCATCCTTGCCATCT
GGGCTTGCCAGGTCGTGCTCATGGGCGCCGTCGAGGGGTACCGCGTCGCCGGTGGCCCGCTCGGGGAGATCGTCGACCCA
CTCTACCCCGGTGGCAGCTTCGACCCCCTTGGCCTAGCCGACGACCCGGAGGCGTTTGCTGAGCTCAAGGTGAAGGAAAT
CAAGAACGGCCGCCTTGCAATGTTCTCCATGTTTGGATACTTTGTGCAGGCCATCGTCACTGGTAAGGGTCCGCTGGAGA
ACCTCGCTGACCACCTCGCCGACCCTGTCAACAACAACGCGTGGGCCTTCGCCACCAACTTTGTGCCCGGCAAGT-----
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------------------------------------------------------------------------------
>chr1B_1050
--------------------------------------------------------------------------------
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---------------------------------------------CGGTGAAGGACCTGCCGTCGTCGGCGCTCTTCGGG
GAGGCGCGCGTCACCATGCGCAAGACCGCGGCCAAGGCCAAGCCGGTGTCGTCGGGCAGCCCGTGGTACGGCTCCGACCG
CGTGCTCTACCTCGGCCCGCTATCCGGCGACCCCCCGAGCTACCTCACCGGTGAGTTCCCCGGCGACTACGGATGGGACA
CCGCGGGGCTCTCGGCCGACCCCGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATCCACTGCCGGTGGGCCATGCTG
GGCGCGCTCGGCTGCGTCTTCCCGGAGCTGCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGG
CTCCCAGATCTTCAGCGAGGGCGGCCTCGACTACCTCGGCAACCCCAGCCTCGTCCATGCGCAGAGCATCCTCGCCATCT
GGGCCTGCCAGGTCGTGCTCATGGGCGCCGTCGAGGGCTACCGCGTCGCCGGCGGCCCGCTCGGCGAGATCGTCGACCCG
CTCTACCCCGGCGGCAGCTTCGACCCCCTGGGCCTCGCTGACGACCCCGAGGCGTTCGCGGAGCTCAAGGTGAAGGAGAT
CAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGCCCTCTCGAGA
ACCTCGCCGACCACCTTGCCGACCCCGTCAACAACAACGCCTGGGCCTTTGCCACCAACTTCGTGCCCGGCAAGTAAGC-
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------------------------------------------------------------------------------
>chr1D_1068
--------------------------------------------------------------------------------
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------------------------------------------------------------------CGGCGCTCTTCGGG
GAGGCGCGCGTCACCATGCGCAAGACCGCGGCCAAGGCCAAGCCGGTGTCGTCCGGCAGCCCGTGGTACGGGTCCGACCG
CGTGCTCTACCTCGGCCCGCTCTCCGGCGACCCCCCGAGCTACCTCACCGGCGAGTTCCCCGGCGACTACGGGTGGGACA
CCGCGGGGCTGTCGGCCGACCCCGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATCCACTGCCGGTGGGCCATGCTG
GGCGCGCTCGGCTGCGTCTTCCCCGAGCTGCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGG
CTCCCAGATCTTCAGCGAGGGCGGCCTCGACTACCTCGGCAACCCCAGCCTGGTCCACGCGCAGAGCATCCTCGCCATCT
GGGCCTGCCAGGTCGTGCTCATGGGCGCCGTCGAGGGGTACCGCGTCGCCGGCGGCCCGCTCGGCGAGATCGTCGACCCG
CTCTACCCCGGCGGCAGCTTCGACCCCCTGGGCCTTGCCGACGACCCTGAGGCGTTCGCGGAGCTCAAGGTGAAGGAGAT
CAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGCCCCCTCGAGA
ACCTCGCCGACCACCTCTCCGACCCCGTCAACAACAACGCCTGGGCCTTCGCCACCAACTTCGTGCCCGGCAAGTAAGC-
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------------------------------------------------------------------------------
>chr1B_1076
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--------------------------------------------------------------------------TTCGGC
GAGGGCCGCATCACTATGCGCAAGACGGCGGCCAAGGCCAAGCCCGCCGCTTCCAGCAGCCCGTGGTACGGCCCTGACCG
CGTCCTCTACCTCGGCCCGCTCTCCGGTGATGCGCCGTCCTACCTCACCGGTGAATTCCCCGGAGACTACGGCTGGGACA
CGGCCGGGCTCTCGGCTGACCCGGAGACGTTCGCGAAGAACAGGGAGCTCGAGGTGATCCACTGTCGGTGGGCCATGCTC
GGTGCTCTTGGCTGCGTCTTCCCGGAGCTCCTCGCTCGCAACGGCGTCAAGTTCGGTGAGGCTGTGTGGTTCAAAGCTGG
TTCTCAGATCTTCAGCGAGGGTGGGTTGGACTACCTCGGCAACCCCAGCCTCGTCCACGCGCAGAGCATTCTCGCTATCT
GGGCCTGCCAGGTCGTGCTCATGGGCGCCGTCGAGGGGTACCGCGTTGCCGGTGGCCCACTCGGTGAGATCGTCGACCCG
CTCTACCCCGGCGGTAGCTTCGACCCCCTGGGGTTGGCCGATGACCCCGAGGCGTTTGCAGAGCTCAAGGTGAAGGAGAT
CAAGAACGGCCGGCTCGCCATGTTCTCCATGTTTGGCTTCTTCGTCCAGGCCATCGTCACCGGCAAGGGGCCCCTTGAGA
ACCTTGCCGACCACCTCGCCGATCCCGTCAACAACAACGCCTGGGCATTCGCCACCAACTTCGTCCCCGGGAAGTGA---
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------------------------------------------------------------------------------
>chr1B_1079
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-----------------------------------------------------------------------------GGC
GAGGGCCGCATCACAATGCGCAAGACGGCGGCCAAGGCCAAGCCCGCCGCTTCCAGCAGCCCGTGGTACGGCCCGGACCG
TGCCCTCTATCTCGGCCCACTCTCCGGTGATGCGCCGTCCTACCTCACCGGCGAGTTCCCCGGGGACTACGGCTGGGACA
CTGCCGGGCTCTCGGCTGACCCCGAGACGTTCTCGAAGAACAGGGAGCTCGAGGTGATCCACTGCCGGTGGGCCATGCTC
GGTGCTCTCGGCTGCGTCTTCCCGGAGCTCCTCGCTCGCAACGGCGTCAAGTTCGGTGAGGCCGTGTGGTTCAAAGCTGG
TTCTCAGATCTTCAGTGAAGGTGGCCTGGACTACCTTGGCAACCCCAGCCTTGTCCACGCGCAGAGCATCCTTGCCATTT
GGGCCTGCCAGGTCGTGCTCATGGGCGCTGTCGAGGGGTACCGCGTTGCCGGTGGCCCGCTCGGTGAGATCGTCGACCCC
CTCTACCCCGGCGGTAGCTTCGACCCCCTCGGTCTGGCCGATGACCCTGAGGCGTTTGCGGAGCTCAAGGTGAAGGAGAT
CAAGAATGGCCGGCTCGCCATGTTCTCCATGTTTGGCTTCTTCGTCCAGGCCATCGTCACCGGCAAGGGGCCCCTTGAGA
ACCTTGCCGACCACCTCGCCGATCCCGTCAACAACAACGCCTGGGCATTCGCCACCAACTTCGTCCCCGGCAAGTGA---
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>chr5D_2009
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-------------------------------------------------AAGGCATCTATGTTCTTCTGCTTAACTACTT
G-TTTCTCTGAACCTTTGAATGTCTAATGCATAACTTCTCTGAATATTTTTTC---AGTCTAGCATGGTAAATATTTCAA
TTTCAGCAAGACATT-CATACCATCCATTTCAAG--------GCTGATCAACTGAACACTCCTTTATATACGTCTTTCAT
TTATATCTCTAACA--AATGCTCTACAAGTCTGGAGTTTCCCCCAGTAAAAA-----AACAAAAAC------TGGAACAC
TAGGACTAGTGCAGCTTCCATGT------GAAGAATGTTGCAGTTAC-TACTGTATATACCATACTACCTGCCTTGCAGA
ACTGTCATGGCCATGGTGTTCC----------------------------------------------------------
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-----------------------------TGGTGTTCTCGAGATCGCTTCTCTGGCTCTTCTCTCCCATCATTTCGATAA
AAGCAGGCTGCACCGGCGTCGGGAGGGACAGCGA---------CGACGCGCTTCCGTTCTCCAAGATGGACACGACGGAC
GACATGAGCGGCCTCCGGCTCGGGTCGTCCTCAACGCAGAGAAGCCCGACGTGGATGCACAGCGAAGCCTCATCCTGTGA
GCAGCCCCCTGCCATGGATGGATCCACCAGCTTCCCTGCCTTTCCTTCCCTCCACAGGCTCCATGCCTAGATGAAAATAA
T----------------------AATAATCAGATCA--------------------------------------------
------------------------------------------------------------------------------
>chr5A_2021
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-------------------------------------------------------------TTCGTCTGCTTATCTACTC
G-TTTCACCGAACCTTTGAATGTGTAATGCACAACTTTTCTGAATAATTTTTC---AGTCTAACATGATAAATATTTCAA
TTTCAGCAAGACATT-CTTACCATCTATTTCAAG--------GCTGATCAACGGAACACTCCTCTAAATACATCTTTCAT
TTATATCTGTAACA--AATGCTCTACAAATCTGGAGTTTCCACCAATAAAAA-----TACTAGTAC------T-------
-------AGTGCAGCTTCCTTCT------GAAGAAAGTTGCAGTTAC-TACTGTG---------CTACCGGCCTTGCAGA
ACTGTCATGGCCATGGTGTTCC----------------------------------------------------------
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-----------------------------TGGTGTTCTCGAGATCGCTTCTCTGGCTCTTGTCTCCCATCATTTCGATAA
AAGCAGGCTGCACCGGCGTCGGGAGGGACAGCGA---------CGACGCGCTTCCATTTTCCAAAATGGACACGACGGAC
GACATGAGCGGCCTCCGGCTTGGGTCGTCCTCGACGCACAGGAGCCCCACGTGGATGCAGAGCAATGCCTCATCCTGTGA
ACAGCTCCCTGCCATGGATGGATCCACCAGCTTACCTGCCTTCCCTTCTCTCCACAGGCTCCATGCCTACATAAAAATAA
T----------------------AATAAAA--------------------------------------------------
------------------------------------------------------------------------------
>SNPs
-S-SS--SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--
S-----------------S------S-------S-------S----S-------S-----------------S-------
--------------S--------SS--------------------S----S------------------S----SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S------------------------SSSSSSS---
----------------------S--------------------------SS-----------------------------
------S--------------S-----S------S-----------------------S--------------------S
---S---S------------------------------------------------------------------------
----------------------------------------S-------------S-S------------S-----S----
--------------------------------------------------------------------------------
-------------------------------S-------S----------------------------------------
-----------------------------------------------------------------SSSS-----------
---S----------------------------------------------------------------------------
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-S------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------S--------------------------S-------------S-------------------------
----------S-------S-S----------------------------S------------------------------
-----S--S---------------S-------S-------------------SSSSS-----------------------
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-----------------S--------------------------------------------------------------
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------------------------------------------------S-----------------------S--S----
-------------------------------S-----------S------------------------------------
-----------------------------S-S--------------------------------------------S--S
---S--------------S-------------------------------------------------------------
--------SSSSSSSSSSSSSSS--S-----S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_503
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---CACGAGTAGATGTCGGCCAG---------------------------------------------------------
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>reverse_1842
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-GGTCAGCTCAACCTCTAGGC-----------------------------------------------------------
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------------------------------------------------------------------------------
