>input_sequence_68517
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--GTTCAGAAGACTCCCCCTTCCTATCTTCTCTTTCTCCTCTCCACTTCGACTATACTCCATTATTTCTCTGTTCTCGCC
GTCCTCTGGCTCAGCTACGTACGAAAAGCAAAGCAAGCAGCATGTACCCAGCCGAGGTTGCCGGTGTTCTTCTCCCCGCG
GCGTACTTGCCGCCACCTGCAAACGCAGCGTCTTTGGGACCCCATTATCCCTACCAGATAGCGGAAGACGATCATCTCCT
GTTCCAGTGCAGCAGTAGCAGTCTAATGCAATTGCCCTACGCCGACGAGCTGTTTCTCAACCACCCTCCGGCGGTGCCGC
TGCGCAACGGGTCGAGCTCCGACGAGCCAGCGGCCCACGCCGTGGACAGGCAGCGCGCGGAGGAGAGGAGGAGGAGGCGG
ATGGTGTCCAACAGGGAGTCGGCGCGGCGGTCGCGCGTGCGGAAGCAGAAGCAGCTGGGCCAGCTGTGGGCGCAGGTCGT
CCACCTCCGGGACGCCAACCGCGACCTGCTCGACCAGCTCAACCGCGCCATCGTGGACTACGACCGCGTCGTGCGCGACA
ACTCCCGGATGAGGGACGAGCGGGCGGAGCTGCAGAGGAGGCTCCGGGAGCTCCCCGTGGTCGATGCCGGCGACGCGGAG
GGCGTCGCCGTTGGTGAAGATGACGAGTCTACAGTCTAGGATGGTTGTAGTTGCAACCAGCTAGAGGAAAAATAACATTT
CTTTCTCT--GAGACCGAGGATGTCTAGCAAATGGCTTCCTTCGTAGTT-TTTTTTTTTTACTTAATAATT-TCTTTCTG
TTCGC---------------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G211500
ATTAGTTTATGTGACCCTAGTGGCAACTCGCAACTAACAAATACTACTACTTTCTCGAAAGGAAAAAAGGTAGTAACAGA
TATGAAAGGAGCATATGACCAGTCTAGTTGCAAACTTGCAACATTTATCTCCTCACAGCTATTTGGAATAAGTAAATAAA
TAAATGATAGCATCTCTGCTTGCACGGATGTACATTCTCTTTACGCAAACAATTATTAGAATCTAAGTCCATGCATGTGA
CACATCAGTGGCCAGGAACCACCAACTACAGTGCCTCCTT----TTCTCCTTTGAGAAAGAACACTCCCGTTGCGTTAGC
CCGGTGAG-----AAAGTGAAAGCGTCGACCGCGTGAACTACGCGGAAGAAAACGCCATGGAGACCGACCGTAGTGCTCC
CATCGATCAGCAC-----CTCCCCACAATGCCAAGTTGCCAATCGTTCTGAAGCACCCCATCATGAAACGCAAAGACATG
AAGGACATGTAAATGGATGATGGATCGCTTCAGCGTCGA---------------TCGACGATCACACGGTTGATCTACTA
GTACTATCCTAGCTAGCGCTGGCTGGAAATGGTTCTTCACTGTTTTTTTTTTTGCGGGTTAAATTGTTCGTCACTGTTTG
CCAACCTCCGAGCTAGAG-------CTGCCGGAGCAGTCGCCCACCTCTGCCGCAGCCTGCAGC----TGCATGATGGCT
CGCAAGAACGGCCGCGCCCCGTGCGGCGAGGCCGCTGTCTGTCTGCCCGGTCGCGGATCGACAGGCTAGATGCAGGCTAC
TCCGGAGGCACGCC--GGGCCGCTACGTAGAATTTGTCGAAAAGCAGGCACAATCATTGTCCATGACATCACGATAAGCA
TCCAGGAAATCAGGTGATTGAGTGTCGTGCCGTGTGCGCTGTGCTGCCTCAACGTGCCATATATCTTCAGCCTTCAGGTG
TGTCTGGACTCTGGATCATGGAGCCAATTACCTCCACGATCCTTTTCCGGCTATAAATCCACCACCCCTCTCTCTTTCTT
CCGTTCAGAAGACTCCCCCTTCCTATCTTCTCTTTCTCCTCTCCACTTCGACTATACTCCATTATTTCTCTGTTCTCGCC
GTCCTCTGGCTCAGCTACGTACGAAAAGCAAAGCAAGCAGCATGTACCCAGCCGAGGTTGCCGGTGTTCTTCTCCCCGCG
GCGTACTTGCCGCCACCTGCAAACGCAGCGTCTTTGGGACCCCATTATCCCTACCAGATAGCGGAAGACGATCATCTCCT
GTTCCAGTGCAGCAGTAGCAGTCTAATGCAATTGCCCTACGCCGACGAGCTGTTTCTCAACCACCCTCCGGCGGTGCCGC
TGCGCAACGGGTCGAGCTCCGACGAGCCAGCGGCCCACGCCGTGGACAGGCAGCGCGCGGAGGAGAGGAGGAGGAGGCGG
ATGGTGTCCAACAGGGAGTCGGCGCGGCGGTCGCGCGTGCGGAAGCAGAAGCAGCTGGGCCAGCTGTGGGCGCAGGTCGT
CCACCTCCGGGACGCCAACCGCGACCTGCTCGACCAGCTCAACCGCGCCATCGTGGACTACGACCGCGTCGTGCGCGACA
ACTCCCGGATGAGGGACGAGCGGGCGGAGCTGCAGAGGAGGCTCCGGGAGCTCCCCGTGGTCGATGCCGGCGACGCGGAG
GGCGTCGCCGTTGGTGAAGATGACGAGTCTACAGTCTAGGATGGTTGTAGTTGCAACCAGCTAGAGGAAAAATAACATTT
CTTTCTCT--GAGACCGAGGATGTCTAGCAAATGGCTTCCTTCGTAGTT-TTTTTTTTTTACTTAATAATT-TCTTTCTG
TTCGCCGAATCTTTGTTCCATGTACCGACTAATA----------------------------------------------
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----------------------------------------------TTTTTAATATTTTTCTAGTATATATACAGTGTAA
TAGATATGGACCAATGACAA-AAATAGGGAGAGGTTGCGAGTTCCGACCACCACATATTTCAAACTAACATGTACGTAGG
AGCATTTCCTAAGTGGCTTTGGTGGCGAAGTTGATACATAAAGCAAAAATAAAATAAAATAA-ATGCTCAATCAAAGCAA
TCTACTCATTAATAGTATGTGATGCTAAATGAAATCTAGAAATAAAATCCATACACAACATGTTATGCAGTTGTCTATAT
TGCCTCAAAATTGTCGTATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTGCACTATGCCGCCGTCCATGTTGGGTAAAATTGTTATCGGTCTCCTACTCAACCTGCATACATGCCAGCATC
TATAGTTGTTGGTGCTCCACTCATGGTAGAATGGATATGAATGGTGCCAATGCTTAGAGCATCTCCAGCCGCGCCCCCAA
CAGGCCCCCAGGGCGACTTTTTTCGTGTCGACGCCAAAAAAAACCCTCAGTCGCGCCCTTAAGACGCCGAAATCCGCCGG
CTCGGACCGTTTTTGGGCCCGGCTATCCCAGGACGAACCAGGGCACTGGGGGCGCTCGG
>chr7D_1
ATTAGTTTATGTGACCCTAGTGGCAACTCACAACTAACAAATACTACTACTTTCTCGAAAGGAAAAAAGGTAGTAACAGA
TATGAAAGGAGCATATGATCAGTCTAGTTGCAAACTTGCAACATTTATCTCCTCACAGCTATTTGGATTAAGTAAATAAA
TAAATGATAGCATCTCTGCTTGCACG------CATTCTCTTTACGCAAACAATTATTAGAATCTAAGTCCATGCATGTGA
CACATCAGTGGCCAGGAACCACCAACTACAGTGCC----TCTTTTTCTCCTTTGAGAAAGAACACTCCCGTTGCGTTAGC
CCGGTGAGAAATTAAAGTGAAAGCGTCGACCGCGTGAACTACGCGGAAGAAAACGCCATGGAGACCGACCGTAGTGCTCC
CATCGATCAGCACAGCACCTCCCAACAATGCCAAATTGCCAATCCTTCTGAAGCACCCCATCATGAAACCCAACCACAAG
AAGGACATGCAAATGGATGA---------------TCGA---------------TCTACGATCACACGGTTGATCTACTA
GTACTATCCTAGCTAGCGCTGGCTGGAAATGGTTCGTCACTGTTA----------------------------------G
CCAACCTCCGAGCTAGAG-------CTGCCGGAGCAGTCACCCACCTGTG-------CTTCAGC----CGCATGATGGCT
CGCAAGAACGGCCGAGCCCCGTGCGGCGAGGCCGCTGTCTGTCTGCCCGGTCGCGGATCGACAGGCTAGATGCAGGCTAC
TCCGGAGGCACGCC--GGGCCGCTACGTAGAATTTGTCGAAAAGCAGGCACAATCATTGTCCATGACATCACGATAAGCA
TCCAGGAAATCTGTTGATTGAGTGTCGTGCCGTGTGCGCTGTGCTGCCTCAACGTGCCATATATCTTCAGCCTTCAGGTG
TGTCTGGACACTGGATCATGGAACCAATTACCTCCACGATCCTTTTCCGGCTATAAATCCACCACCCCTCTCTCTTTCTT
CCGTTCAGAAGACTCCCCCTTCCTATCTTCTCTTTCTCCTCTCCACTTCGACTATACTCCATTATTTCTCTGTTCTCCCT
GTCCTCTGGCTCAGCTACGTACGAAAAGCAAAGCAAGCAGCATGTACCCAGCCGAGGTTGCCGGTGTTCTTCTCCCCGCG
GCGTACTTGCCGCCACCTGCAAACGCAGCCTCTTTCGGACCCCATTATCCCTACCAGATAGCGGAAGACGATCATCTCCT
GTTCCAGTGCGGCGGCGGCAGTCTAATGCAGTTGCCCTACGCCGACGAGTTGTTTCTCAACCACCTTCCGGCGGG---GC
TGCCCAACAGGTCGAGCTCCGACGAGCCAGCGCCCCACGCCATAGACCGGCAGCGCGCGGAGGAGAGGAGGAGGAGGCGG
ATGGTGTCCAACCGGGAGTCGGCGCGGCGGTCGCGCGTGCGGAAGCAGAAGCAGCTGGGCCAGCTGTGGGCGCAGGTCGT
CCACCTCCGGGACGCCAACCGTGACCTGCTCGACCAGCTCAACCGCGCCATCGTGGACTGCGACCGCGTCGTGCGCGACA
ACTCCCGGCTGAGGGACGAGCGGGAGGAGCTGCAGCGGAGGCTCCGGGAGCTCCCCGTGGTCGATGCCGGCGACGCGGAG
GGCGTCGCCGTTGGTGAAGATGACGAGTCTACAGTCTAGGATGGTTGTAGTTGCAACCAGCTAGAGGAAAAATAACATTT
CTTTCTCT--GAGACCGAGGATGTCTAGCAAATGGCTTCCTTCGTAGTAATTCTTTTTCTGCTTAATAATTTTCTTTCTG
TTCGTCGAATCTTTGCTCCATGTACCGATTAAATATATAG----------------------------------------
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-------------------------------------------------TTAATATTCTTCTAGTATACATACAGTGTAA
TAGATATGGACCAATCACAAGAAAAAGGAAGAGGTTGCTAGTTCCGACCACCACATATTTCAAACTAA----TATGTAGG
AGCATTTTCTAAGTGGCTTTGGTGGCGAAGTTGATACATAAAGCAAAAGAAATTG----AAAGATGCTCAATCAAAGCAA
TCTACTCATTAATAGTATGTGATGCTAAGTGAAATCTAGAGATACAATCCATACACAACATGTTATGCAGTTGTCTAT--
TGCCTCAGAATCGTCGTATCAAGGGGATAAAAGAAAAAGACTTAACATCCTACTTCGGTATTGCTAGCATAGACANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-
-------------------------------GGTAAAATCGTCATATGTCTCCTACTCAACCTGCATACATGCCAGCATC
TATAGTTGTCGGTGCTCGAC------------------------------------------------------------
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>chr7B_1
ATTAGTTTATGTGACCCTAGTGGCAACTCACAACTAACAAATACTACTACTTTCTCGAAAGGAAAAAAGGTAGTAACAGA
TATGAAAGGAGCATATGATCAGTCTAGTTGCAAACTTGCAACATTTATCTCCTCACAGCTATTTGGA--------ATAAA
TAAATGATGGCATCTCTGCTTGCACG------CATTCTCTTTACGCAAACAATTATTAGAATCTAAGTCCATGCATGTGA
CACATCAGTGGCCAGGAACCACCAACTACAGTGCC----T----TTCTCCTTTGAGAAAGAACACTCCCGTTGCGTTAGC
CCGGTGAGAAAAAAAAGTGAAAGCGTCGACCGCGTGAACTACGCGAAAGAAAACGCCGTGGAGACCGACCGTAGTGCTCC
CATCGATCAGCAC-----CTCCCCACAATGCCAAATTGCCAATCCTTCTGAAGCACCCCATCATGAAACGCAACCACAGG
AAGGACATGTAAATGGATGA---------------TCGATCGCTTCAGCGTCGATCTACGATCACACGGTTGATCTACTA
GTACTATCCTAGCTAGCGATCGCAGGAAATGGTTCGTCACTGTTA----------------------------------G
CCAACCTCCGAGCTAGAGCTGCCGCCTGCCGGAGCAGTCACCCACCTCTG-------CTGCAGCTAGCTGCATGATGGCT
CGCAAGAACGGTCGAGCCCCGTGCACCGAGGCTGCTGTCTGTCTGCCCGGCCGCGGATCGACAGGCTAGATGCAGGCTAC
TCCGGAGGCACGCCGGGGGCCGCTACGTAGAATTTGTCGAAAAGCAGGCACAATCATTGTCCATGACATCACGATAAGCA
TCCAGGAAATCAGGTGATTGAGTGTCGTGCCGTGTGCGCTGTGCTGCCTCAACGTGCCATATATCTTCAG---------G
TGTCTGGACTCCGGATCATGGAGCCAATTTCC-CCATGATCCTTTCCCGGCTATAAATCCACCACTCCTCTCTCTTCCTT
CCGTTCACAAGACTCCCCACCCGTCC--TCTCTTTCCCTTCTCCACTCCGACTATACTCTGTTATTTCT---------CT
GTCTTCTAGCTCAGCTGCGTACTACAAGCAAAGCAAGCAGCATGTATCCAGCTGAGGTTGCAGGTGTTCTTCTCCCCGCG
GCGTACTTGCCGCCACCTCCAAACGCAGCCTCTTTCGGACCCCATTATCCCTACCAGATAGCGGAAGACGATCATCTCCT
GTTCCAGTGCGGCGGCAGCAGTCTAATGCAGTTGCCCTACGCCGACGAGCTGTTTCTCAACCACCCTCCGGCGGG---GC
TGCCCAACAGGTCGAGCTCCGACGAGCCAGCGTCCCACGCCGTAGACCGGCAGCGCGCCGAGGAGAGGAGGAAGAGGCGG
ATGGTGTCCAACCGGGAGTCGGCGCGGCGGTCGCGCGTGCGGAAGCAGAAGCAGCTGGGCCAGCTGTGGGCGCAGGTCGT
CCACCTCCGGGACGCCAACCGTGACCTGCTCGACCAGCTCAACCGCGCCATCGTGGACTGCGACCGCGTCGTGCGCGACA
ACTCCCGGCTGAGGGACGAGCGGGAGGAGCTGCAGCGGAGGCTCCGGGAGCTCCCTGTGGTCGATGCCGGCGACGCGGAG
GGCGTCGCCGTTGGTGAAGATGACCAGTCTACAGTCTAGGATGGTTGTAGTTGCAACCAGCTAGAGGAAAAATAACATTT
CTTTCTCTGAGAGACCGAGGATGTCTAGCAAATGGCTTCCTTCGTAGTAATTCTTTTTCTGCTTAATAATTTCCTTTCTG
TTCGTCGAATCTTTGCTCCATGTACCGATTAAATAGTATATACTCCCTCCGGTCCAAAATATTTGTCTTTTTAGATATTT
CAAATGAACTATCACATACGGACGTATATAACCATATTTTAGAGTGTAGATTCACTCATTTTGCTATGTATATAGTCACC
TGTTGAAATCTCTAGAAAGACAAATATTTAAAAACGGAGGAAGTAGTTATTAATATTCTTCTAGTATACATACAGTGTAA
TAGATATGGACCAATCACAA-AAAAAGGGAGAGGTCGCTAGTTCCGACCACCACATATTTCAAACTAA----TATCTAGG
AGCATTTTCTAAGTGGCTTTGGTGGAGAAGTTGATGCATAAAGCAAAAAAAAAAAGAAAAAAGATGCTCAATCAAAGCAA
TCTACTCATTAATAATATGTGATGGTAAATGGAATCTAGAAATACAATCCATACACAACATGTTATGCAGTTGTCTAT--
TGCCTCAGAATTGTCGTATCA-----------------------------------------------------------
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>SNPs
-----------------------------S--------------------------------------------------
------------------S------------------------------------------------S------------
--------------------------SSSSSS------------------------------------------------
-----------------------------------SSSS-----------------------------------------
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----------------------------------S---------S----------------------------SS---S-
--------------------SSSSSSSSSSSSSSS---------------------S-----------------------
-----------------------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
---------------------------------------S----------SSSSSSS-----------------------
--------------S-----------------------------------------------------------------
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-----------------------------------------------------------------------------S-S
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-----------------------------S-----S--------------------------------------------
----------S--S-S--------------S-------------------------------------------SSSS--
---S----S-----------------------S----------S---S--------------------------------
------------S-------------------------------------------------------------------
---------------------S-------------------------------------S--------------------
--------S---------------S----------S--------------------------------------------
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------------------------------------------------S---S-----S-S-------------------
----S----------S------------S---SS----------------------------------------------
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------------------------------------------------S--------S----------S-----------
---------------S--------S-------------S-----------------------------SSSS--S-----
-------S-----------------------------------------S----SS---S--------------------
--------------------------------------------S---------------------------------SS
-------S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
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-------------------------------------------------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--S--SS---------------------------------
---------S-------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_191
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-----------ATCTCTGCTTGCACGGATGT-------------------------------------------------
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>reverse_2105
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------------------------TAGGGAGAGGTTGCGAGTTC------------------------------------
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