>input_sequence_68384
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---------------------------------ATGGTGAAGAAGCTTGGCCTCACGTCTCTCATCTTCAGCAGCAAGCA
GGTGGACAGTGCTGCCAGTGCCAGTGGCGCTGCACCTTCCTCCGTGGCCTCGTCTTCCTCCATGTCTGCCACCTCGTGGC
AATGGCCGTCCTGCAAGCAACCAAGGACCCTCTCCTTCAGGCAGCAGCAGCACCAAGAGCAGCACCAGACGGCGTACAAG
ACCATGAACTCCGCCTACTTGCCCGACTCTGGCGCCGACTCGTGCTTCTCCAACTCCTTCGCCTCGCTCGACGACAGCCT
CTCCACGGCGTCCGAGGCCGCCTCCGGGCTCGTTGAGGCCAACGAGCGAGAGACGGTCATCCGCGCCCTGCGCTCCGGCC
GCCTCTTCTTCGAGCCCCACGCAACGCCGGCCACCTCCTCCTCCATACTCGACGAGGCCAAGCTGAAGGTGAAGCACATC
GACACTACCACCGCTACCACCTGCTGCATCAGCGGGAAGGTGGACAAGACGGCGCCGTTCGAGGGAGCGACAGCGATGAC
CATGGACTCGTCGAACCCGTACCGCGACTTCCGGGCGTCCATGGAGGAGATGGTAATGAGCCATGGCGTGAAGGACTGGT
GCTGGATGGAGAAGATGCTGGGGTGGTACCTCAGGGCCAACGGCAAGAGCACCCACGGCCTCATCGTCGGCGCCTTCGTC
GACCTGCTCGTCGCGCTCAGCGACACCGCCTCGCCGTCCTCCCCGACCACCGCCAGCACCAACCGCTCCTCCTCCTCCTT
CAGCGGCAGCGACGAGATCAAGGAGGAAGAAGGATGA-------------------------------------------
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-----------------------------------
>chr7B_1_TraesCS7B01G228200
TACCACCAAGGAACAAGGCCAAGGTCTCATCTGTGAAAGATTAAGGTTACTTTGCAGGGAGATGAGGCCCATCCCGAGAC
ATGACA--------GATGGATGGAGAGCTAGCTAGGCGCACTAGT----------------------------------T
AAAACAATTTGAGGACGCTTCTCCCTTGTCTGCACCTAATTATCTAGAGATCCTGTGACCTTATTGCACCATTTGATTAC
AACAGGTATCTGCGCACTTGCGGCATTTACTATTATATA----TCCTCCTATACGTA----TGTTGTTGTGAAACTGATC
AACTAATTTGCTTCTGCTCAGCCTGCAGATTAAACCACACCAC--GCCACACCACCGGCTCCCAATAATCTAATGCTTGC
CGCATGTGAAGATCATATCGATCATTACATTTATCTCTGCTCTGGGCAAATTGGATGGACGGCGCATATACCTATATTAG
ATTAAATTGCAACAAGGTAGCACCTACCAATACCAATTAAACGGTCTCTTCAGCTGCTAGCTAGCCA-CTCCTGATCATG
CATGTGTCTTGTAGCCTTGTAGAAGAGCAAGGCTCCACGTGGATGGCCAAGTAAACAAAAGAGGTTTAGCAGCACACCAC
CCCAAGTGACTGATTAGCCAGAAGCAT------TACTATATATCTTCACAAATTGCACTCCACCACACCATCCA------
TGGCATCTTCCTTCCTTTCTCCCCTCCTGAAAAATACATCATGAACAACTAGTCTCTCTGCTCACCAGGCAACCTAGCTA
CTCTAGCTGATTGCTCTTTTGATTGCTCCTGTCCTGTACTGATATGCTGCTAGCTTC-----GTTAATTATATGCCAATA
TGTGCTATGCAACCCTCCTC---TGAGCAAAAGCCCACATACACACACCGCCTTCCTCACTCTCTCTAATTGAGTAGAGC
TGTAGTAGCCCTGCCCACACCCAGTGGGAGGCGGAGCACCATAGCCACAGCCTCTGCCTCTTGTGCATCGTCCTGTTTGA
TTTCTTCTCCTTGAGATCAGACTAAAACCAGCCATGGTGAAGAAGCTTGGCCTCACGTCTCTCATCTTCAGCAGCAAGCA
GGTGGACAGTGCTGCCAGTGCCAGTGGCGCTGCACCTTCCTCCGTGGCCTCGTCTTCCTCCATGTCTGCCACCTCGTGGC
AATGGCCGTCCTGCAAGCAACCAAGGACCCTCTCCTTCAGGCAGCAGCAGCACCAAGAGCAGCACCAGACGGCGTACAAG
ACCATGAACTCCGCCTACTTGCCCGACTCTGGCGCCGACTCGTGCTTCTCCAACTCCTTCGCCTCGCTCGACGACAGCCT
CTCCACGGCGTCCGAGGCCGCCTCCGGGCTCGTTGAGGCCAACGAGCGAGAGACGGTCATCCGCGCCCTGCGCTCCGGCC
GCCTCTTCTTCGAGCCCCACGCAACGCCGGCCACCTCCTCCTCCATACTCGACGAGGCCAAGCTGAAGGTGAAGCACATC
GACACTACCACCGCTACCACCTGCTGCATCAGCGGGAAGGTGGACAAGACGGCGCCGTTCGAGGGAGCGACAGCGATGAC
CATGGACTCGTCGAACCCGTACCGCGACTTCCGGGCGTCCATGGAGGAGATGGTAATGAGCCATGGCGTGAAGGACTGGT
GCTGGATGGAGAAGATGCTGGGGTGGTACCTCAGGGCCAACGGCAAGAGCACCCACGGCCTCATCGTCGGCGCCTTCGTC
GACCTGCTCGTCGCGCTCAGCGACACCGCCTCGCCGTCCTCCCCGACCACCGCCAGCACCAACCGCTCCTCCTCCTCCTT
CAGCGGCAGCGACGAGATCAAGGAGGAAGAAGGATGAACCGAACTCAACTGGTACATATGATTATGATTAGTTGTCGTCC
CTTGCTGCCATGATTCGCGTCAAGTGCTGTCAATTCCCAGCCGGATGCAGTGCAGCTTGATCAAGCAAGAGATTAGTTGT
ATTGATTTCATTTAT----CTTTTGC--GAAGCTACTGGCTAGCTATTGTGTGATTGCCTGTCAGTTAACTCCTCGTGCG
CGCGTGCACGCCTACCTAACTGATTGTTTGCTAGCTAGGTGA----GTACTATATTTGAATTTGTGTGCGCAGCCCGGAT
ATTA-------------------------------------------------------------------------CGT
ATGAGAAAACCAAATGAAATGTAAAAAAAATATATAAATATGTATAGCGTGTGTGTTGTCTGCAAAAGCTGTTTGGAACG
CGAGAATTTTCACCGAAATTTGGTCTTCTTTCTCAAAAACAGTTCAGTTCCCACAAGAAATGAAGAAGGGAAAT-CTTTT
GTTTCAGACGGATCTAAATATGTGATTGTGTGCATTCCGTTTCCCCTTTTCCATTTTTGTGTGTGAGCAGTCGTTGGCCA
TACAGTTGTCATTTTGTCAGTCAACTAACTTTTTGGCTCTGCCTGCGTGATGTATTGTCTCTC--CACATCATATACATG
GATGGTGAAATGACAGGCCTAGCTA-CTAGTAATTTCACGTCAGGAATCTTCATCTCATTCTCAGGTTGGAGCTGAAAGA
ACCACATCAGTCACTGGGTCATCATGTGGTGGATCGGTTGAATTAGTTATGTGCGTGATAT-------------------
--------------------------------------------------------------------------------
-----ATAGTTGCTTCTTTCTCAGACACGGAATTTTGGTCACACGTCCCTCGTGAAACATGCTGCTCGGAGTAGGAATGT
AGGATCCACGAGAGCAGAGCAGAATAC---TACT----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GTAACAAATAATATAGTGTAATCCTCCTCATGCATGCACGATAAC
TGATACTACGACATACTCCCTGGGAGTAG---TACAATAATCAACATGGGAATCGACCGAATATCTTGCAATAATGATGT
GCTGAGTTTATGAGTGATGCATTTGGGACAAACTC
>chr7D_1
TACCACCAAGGAACAAGGCCAAGGTCTCATCTGTGAAATATTAAGGTTACTTTGCAGGGAGATGAGGCCCATCCCGAGAC
ATGACAGATGGATGGATGGATGGGGAGCTAGCTAGGCGCACTGCGTGGATTGCTAATATTACTTACTCGTACTAA-----
AAAACAATTAGAGGACGTTTCTCTCTTGTCTGCACCTAATGATCT----ATCCTGTGACCTTGTTGCGCCATTTGATTAC
AACAGGTATCTACACACTTGCGGCATTTACTATTATATA----TCCTCCTATACGTACGTATGTTGTTGTGAAACTGATC
AACTAATTTGCTTCTGCTCAGCCTGCAGATTAAACCACGCCACC-------CCACCGGCTCCCA--AATCTAATGCTTGC
CGCATGTGAAGATCATATCGATCATTACATTTATCTCTGCTCTGGGCAAATTGGATGGACGGCGCA--TACCTATATTAG
ATTAAATCGCAACAAGGTAGCACCTACCAATACCAATTAAACGGTCTCTTGAGCTGCTAGCTAGCTAGCTACTGATCATG
CATGTGTCTTGTAGCCTTGTACAAGAGCAAGGCTCCACGTGGATGGCCAAGTAAACAAAAGAGGTTTAGCAGCACACCAC
CCCAAGTGATTGATTAGCCAGAAGCAT------TACTATATATCTGCACAAATTGCACTCCACCACACCATCCATGGCAA
TGGCATCTTCCTTCCTTTCTCCCCTCCTGAAAAATACATCATGAACAACTAGTCTCTCTGCTCACCAGGCAACCTAGCTA
ATCTAGCTGATTACTCTTTTGATTGCTCCTGTCCTCTACTGATATGCTGCTAGCTTAGCTTTGTTAATTATATGCCAATA
TGTACTATGCAAC---CCTC---TGAGCAGAAGCCCACATACACACACCGCCTTCCTCACTCTCTCTAATTGAGTAGAGC
TGTAGTAGCCCTGCCCACGCCCAGTGGGAGGCGGAGCACCATAGCCACAGCCTCTGCCTCTTGTGCATCGTCCTGTTCGA
TTCCTTCTCCTTGAGATCAGACTAAAACCAGCCATGGTCAAGAAGCTTGGCCTCACGTCTCTCATCTTCAGCAGCAAGCA
GGTGGACAGTGCTGCTAGTGCCAGTGGCGCTGCACCTTCCTCCGTGGCCTCGTCTTCCTCCATGTCTGCCACCTCGTGGC
AATGGCCGTCCTGCAAGCAGCCAAGGACCCTCTCCTTCAGGCAGCAGCAGCACCAAGAGCAGCACCAGACGGCGTACAAG
ACCATGAACTCGGCCTACTTGCCCGACTCCGGCGCCGACTCGTGCTTCTCCAACTCCTTCGCCTCGGTCGACGACAGCCT
CTCCACGGCGTCCGAGGCCGCCTCCGGGCTCGTTGAGGCCAACGAGCGAGAGACGGTCATCCGCGCCCTGCGCTCCGGCC
GCCTCTTCTTCGAGCCCCACGCAACGCCGGCCACCTCCTCCTCCATTCTCGACGAGGCCAAGCTGAAGGTGAAGGACAGC
GACACTACCACCGTTACCACCTGCTGCGGCAGCAGGAAGGTCGACAAGACGGTGGCGTTCGAGGGAGCGACGGCGGTGAC
CATGGACTCGTCGAACCCGTACCGCGACTTCCGGGCGTCCATGGAGGAGATGGTAATGAGCCATGGCGTCAAGGACTGGT
GCTGGATGGAGATGATGCTGGGGTGGTACCTCAGGGCCAACGGCAAGAGCACCCACGGCCTCATCGTCGGCGCCTTCGTC
GACCTGCTCGTCGCGCTCAGCGACACCGCCTCGCCGTCCTCCCCGACCACCGCCACAACCAACGGCTCCT---CCTCCTT
CAGCGGCAGCGACGAGATCAAGGAGGAAGAAGGATGAACCGAGCTCAACTGGTACATATGATTATGATTAGTT---TTCC
CTTGCTGCCATGATTCGCGTCAAGTGCTGTTAATTCCCAGCCGGATGCGGTGCAGCTTGATCAAGCGTGAGGTTAGCAGT
ATTGATTCCATTTATTTACCTTTTGC--GAAGCTACTGGCTAGCTATTGTGTGTTTGCCTGTCAGTC---------TGCG
CGCGTGCATGCCTACCTAACTGATTGTTTGCTAGCTAGGTGAGTACGTACTATATTTGAATTTGTGTGCACAGCCCGGAT
ATTA-------------------------------------------------------------------------CGT
ATGAGAAAATCAAATGAAATGAAAAAAAAATG--TAAATATGTATAGCGTGTGTGTTGTCTGCAAGCA-TGTTTGGGACG
CGAGAATTTTCACCGAAATTTGGTCTTCTTTCTCAGAAACAGTTCAGTTACCACAAGAAATGAAGAAGGGAAACCCTCTT
GTTTCAGACGGATCTAAATCTGTGAATGTGTTAATTCCGTTTTCCCTTTTCCATTTTTGTGTGTGAGCAGTCGTTGGCCA
TACAGTTGCCATTTTGTCAGTCAACAAACCTTTTGGCTCTGCCTGCGTGATGC-------CTC--CACATCATATACATG
GATGGTGAAATGACAGGCCTAGCTA-CTAGTAATTTCACGTCAGGAATCTTCATCTCATTCTCAGGTTGGAGCTGAAAGA
ACCACATCAGTCACTGGGTCATCATGTGGTGGGTCGATTGAATTAGTTATGTGCGTGATAT-------------------
--------------------------------------------------------------------------------
-----ATAGTTGCTTCTTTCTCAGACACAGAATTTCAGTCACACGTCCCTCGTGAAACATGCTGCTCGGAGTAGGA----
----TCCACGAGAGCAGTGCAGAATACCAATACTTCCTCCGTCCCAAAATAAATGTCTCAATTTTATATTAAGTTTAGTA
ACAAAGTTATATTAGAGTTAAGACATT-----------------------------------------------------
-----------------TATTTTGAGACGAAGAGAGTAACAAATAATCTGGTGTAATCGTC---AGGCATGAGCAATAAC
TGATAC-----------GTACCACCATACCTATACAATAATTAACATGCAAATCGACCGAATATCTTGCAATAATGATGT
GCTGAGTTTATGAGTGATGCATTTGGGGCAAACTC
>chr7A_1
TACCACCAAGGAACAAGGCCAAGGTCTCATCCGTGAAAGATTAAGGTTACTTTGCAGGGAGATGAGGCCCATCCCAAGAC
ATGACAGATGGATGGATGGATGGAGAGCTAGCTAGGCGCACTGCGTGGA---CTACTATTTACTACTCCTACTTCCTACT
AAAACAATTAGAGGACGTTTCTCTCTTGTCTGCACCTAATTATCT----ATCCTGTGACCTTGTTGCACCATTTGATTAC
AACAGGTATCTGCGCACTTGCGGCATTTACTATTATATATATATCCTCCTATATGTACGTATGTTGTTGCGAAACTGATC
AACTAATTTGCTTCTGCTCAGCCTGCAGATTAAACCACGCCACAGGCCACACCACCGGCTCCCGATAATCTAATGCTTGC
CGCATGTGAAGATTATATCGACCATTACATTTATTTCTGCTCTGGGCAAATTGGATGGACGGCGCA--TACCTACATTAG
ATTAAATCGCAACAAGGTAGCACCTACCAATACCAATTAAATGGTCTCTTCAGCTGCTAGCG----AGCTACTGATCATG
CATGTGTCTTGTAGCCTTGTACAAGAGCAAGGCTCCACGTGGATGGCCAGGTAAACAAAAGAGGTTTAGCAGCACACCAC
CCCAAGTGATTGATTAGCGAGAAGCATTAGTACTACTATATATCTGCAGAAATTGCACTC-----CACCATCCATGGCAA
TGGCATCTTCCTTCCTTTCTCCTCTCCTGATAAATACATCATGAACAACCAGTCTCTCTGCTCACCAGGCAACCTAGCTA
CTCTCG----TTACTCTTTTGATTGCTCCTGTCCTGTACTGATATGCTGCTAGCT----TTTGTTAATTATATGCCAATA
TGTGCTATGCAAC---CCTCCTCTGAGCAAAAGCCCACATACACACACCACCTTCCTCACTCTCTCTAATTGAGTAGAGC
TGCTGTAGCCCTGCCCACACCCAGTAGGCGGTGGAGCACCATAGCCACAGCCTGTGCCTCTTGTGCATCGTCCTGTTCGA
TCTCTTCTCCTTGAGATCAAACTAAAACCAGCCATGGTGAAGAAGCTTGGCCTAACATCCCTCATCTTCAGCAGCAAGCA
GGTGGACAGTGCTGCCAGTACCAGTGGCGCTGCACCTTCCTCCGTGGCCTCGTCCTCCTCCATGTCTGCCACCTCGTGGC
AATGGCCGTCCTGCAAGCAGCCAAGGACCCTCTCCTTCAGGCAGCAGCAGCACCA---------CCAGACGGCGTACAAG
ACCATGAACTCGGCCTACTTGCCAGACTCCGGCGCGGACTCGTGCTTCTCCAACTCCTTCGCCTCGGTCGACGACAGCCT
CTCCACGGCGTCCGAGGCCGCCTCCGGGCTCGTTGAGGCCAACGAGCGAGAGACGGTCATCCGCGCCCTGCGCTCCGGCC
GCCTCTTCTTCGAGCCCCACGCAACGCCGGCCACCTCCTCCTCCATCCTCGACGAGGCCAAGCTGAAGGTGAAGGACAGC
GACACTACCACCGTTACCACCTGCTGCGGCAGCGGGAAGGTCGACAAGACGGCGCCATTCGAGGGAGCGACGGCGCTGAC
CATGGACTCGTCGAACCCGTACCGCGACTTCCGGGCGTCCATGGAGGAGATGGTAATGAGCCATGGCGTCAAGGACTGGT
GCTGGTTGGAGAAGATGCTGGGGTGGTACCTCAGGGCCAACGGCAAGAGCACCCACGGCCTCATCGTCGGCGCCTTCGTC
GACCTGCTCGTCGCGCTCAGCGACACCGCCTCGCCGTCCTCCCCGACCACCGCCAGCACCAACCGCTCG---TCCTCCTT
CAGCGGCACCGACGAGATCAAGGAGGAAGAAGGATGAACCGAGCTCAACTGGTACATATGATTATGATTAGTT---GTCC
CTTGCTGCCATGATTCGCGTCAAGTGCTGTTAATTCCCAGCCGGATGCAGTGCAGCTTGATCAAGCGTGAGGTTAGCAGT
ATTGATTCCATTTATTTATCTTTTGCAAGAAGCTGCTGGCTAGCTATTGTGTGATTGCCTGCCAGTTAACTCCCCGTGCG
CGCGTGCGCGCCTACCTAACTGATTGTTTGCTAGCTAGGTGAGTACGTACTGTATTTGAATTTGCGTGCACAGCCCGGAT
ATTGCGTATGAGAAAACCAAAAAAAAAAAAAGGCAACCTGGTGCATGTAGCTTTACCACTGCGCCAAGGCTCCCCTTCGT
ATGAGAAAACCAAATGAAATGTAAAAAAC---TATAAATATATATATCGTGTGTGTTGTCTGCAAGCA-TGTTTGGGACG
CGAGAATTTTCACCGGAATTTGGTCTTCTTTCTCAGAAACAGTTCAGTTACCGCAAGAAATGAAGAAGGGAAAT-CTCTT
GTTTCAGACGGATCTAAATATGTGATTGTATGCATTCCGTTTTCCCTTTTCCATTTTTGTGTGTGAGCAGTCGTTGGCCA
TACAGTTGTCATTTTGTCAGTCAACTAACTTTTTGGCTCTGCCTGCGTGATGC-------CTCTCCACATCATATGCATG
GATGGTGAAATGACGGGCCTAGCTAGCTAGTAATTTCACGTCAGGAATCTTCATCTCATTCTCAGGTTGGAGCTGGAAGA
AACACATCACTCGCTGGGTCATCATATAGTGGATCGATTGAATTAGTTATTACTCCCTCCGTTCTGAATTACTTGTCGCA
GGTATGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTCTGCGACAAGTAATTTAGAACGGAGAGAGTATGT
GCGTGATAGCTGATCCTTTCTCAGACACAGAATTTCAGT--CACGTCCCTCGTGAAACATGCTGCTCGGGA--------T
AGGACCCACAAGAGCAAAGCAGAATAC---TACTTCCTCCGTCTCATAATATAAAAATATTTTTGACACTAGTGTAGTGT
TAAAAACGTCCTTATATTTTGGAACAGAGGGAGTACTTCCTTTGTCTCATAATATAAGACATTTTTGCAAGCTAACATAA
ATTGCAAAAACGTTCTATATTATGAGATGAAGGGAGTAACAAATAATCTGGTGTAATCCTC---AAGCATGTGCGATAGC
TAATACTCCATATGTATGTACCACCATACA--TACAATAATTAACATGCGAATCGACCGAATATCTTGCAATAATGATGT
GCTGAGTTTATGAGTGATGCATTTGGGACAAACTC
>SNPs
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------------------------------------------SSS-----------------------------------
---------S-------S-----S---------------------SSSS-------------S-----------------
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--------------------------------------S-----------------------------------------
------------------------------------------------------------------SS------------
-------S---------------------------------------------------------S----S---------
---------------------S----------------------------------------------------------
---------S-----------------------------------S----------------------------------
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------------S-------------------------------------------S-----------------------
-------------SSS----------------------------------------------------------------
-----------------------------------------------------------------------------S--
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-------------------S------------------------------------------------------------
-----------S-----------------S------------------------------------S-------------
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----------------------------------------------S---------------------------S---S-
-------------S-------------SS------------S-----------------------------S---S----
---------------------------------------------------------------------S----------
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----------------------------------------------------------------------SS--------
------------------------------------------S------------------------------SSS----
------------------------------S-----------------------------------SS---S----SS--
-------S-----------------------------------------------------------------S------
---------------------------------------------------------------------S----------
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-------------------------------S---------------------------------SSSS-------S---
-----------------------------------S-------------S---------------------------S--
------------------------------------------S-------------------------------------
----------------------------------------------------SSSSSSSS--------------------
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------------------------------------S-------------------------------------------
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----------------------------S------SS---------------------------------------SSS-
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-----------------------------------------------S-S-----------SSS-S-----SS-------
-------S-SSSSSSS-SSSSSSSSS--S------------S------S-------------------------------
-----------------------------------
>forward_123
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-----------------------AGAGCTAGCTAGGCGCACTA-------------------------------------
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>reverse_1670
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---------------------------------------------------------------------GAAGGACTGGT
GCTGGATGG-----------------------------------------------------------------------
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>forward_468
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------------------------------------------------AATTGGATGGACGGCGCATA------------
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>reverse_2308
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-------------------------------------------------------------------GCTGTTTGGAACG
CGAGAAT-------------------------------------------------------------------------
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-----------------------------------
