>input_sequence_68373
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---------------------------------------------ATGGAGGTGACGTTCGAGACGACGCAGGGTCGCCG
ATTCACCGTCGAGATCTGGTACTTGTCCACCGTGCGGAGGATCAAGGAGTACATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGCCTCTTCTTCCATGGCCAGGAGCTCGAGGACGACCGCGACACCCAGCACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGACGACTCCCCCACT---------------------------------------GCCGC
---CGGCGCCGTCGTCCACGTCGTCGCCTCCGGGCCGGCCCTCGGCCAGGGCCGCCGCATCGCGCTCGAACTGGACGCGT
CCTGCACCATCGCCCGCCTCAAGGAGATGCTCCAGGAGCGCACAGACGGGGCGGTGCCGGCCACAAAGGTGAGCGTGTTC
TTGGAGGAGGCGGAGATGGAGGATGACAAGGAGCTGGCGCAGTTCAACCCGCCG---GCCGA---TGGGACGGAGATGGA
GGTGCGCGTGGTCGTGCGCCAGCCGCCGC---CGCCGCCGCCAGCGTGCGACAACGGGAACGGGGCGGCCAA------GG
TTAA---CAAGCCGCAGCAGCGGATGTCTGTGGAGGTGAAGTGGGGCGCCAAGGCGGTGACGTTGGAGGTGAGCGACATG
GACGCCGTCAAGGAGCTGCGGGCGGAGCTGGGCGGCGCGGCGCCGCACCTCCTCCTGCCCGACGACGGCGCCTACTTCTT
CATCTACAAGCAGAATGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGAGCGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGA---------------------------------------------------
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>chr5B_1_TraesCS5B01G486400
GTACTAGTTTAACGTAGTATGTAATATAGCTATGCTTGTAGTTTGTTGATCATGTGATGAACTATGTAGTATGTGAACTA
TGTTTGTGCAGTTTCTCTCGCGAAATTATTTTTTCAAAATATGCGGATTTAGATACGGGTTCTGCTCGGCCGCACATGTT
TTTGACCCGTAAACGCGACCTTCATCAATCCGCAAATGTGTTTTGCGGGTCGTATTTTTGCGGGGTCTGCTAGAGTTGCT
CTTAGTACCGAGCGGGAGAAGGACTTTGGCATCAACTCTTCAACTAAACTAGGGCATTACTTGGGCGGGTTATAT-----
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-----------------AAAGCCCGACCGCAAAAACCCGAACCCGGTCCTGAACAATTAAACTGTGCACTTTTCCTATTA
AATAAAATTATTTAAATTATTTTTGGGCAGTATAAATGTAGATAAACTAAACTCTGTTTTTGAGGTAATTCAGAC-CTCT
GGGCCAGGCCATCGAGCCTATACCTGGAGCTCAT------CCCGACCGTCCGGCCCGGCTGCCCATGCTCAGGTTTATCT
TAGAGAGATCTACCCCTCA-------AAAAAAAACTGAGAGAGATCATGTGTCATCATGCATTTCCCTCAAAAAAAAAAC
AATTGTGTCATCATGCAT-----------------------GGATGCATGC------ACATATCTCAGAATATTTTCTT-
-ATAAATGCTTGCTCAATAATTTTTGCAGATATGAGAATAACATCGCGTAT-TACCATGGATGGAAATTTTGTTGTAAAA
GCCCGTACATTAATTTT-ACACGTATGG--T--ATGCTAT--CTGAGAATAT----TTGTTATAAATGCCTATATATTGT
A---CCTCTACTGG-----CGAAAAATGTAACCTTA--------ATTTTAATGA---------ATAC-----GTAGGCAC
TTTAAGCGGTAAAAT--AACAAATCTGAGAATAAT-------AAATCGAGTAATAATTA-----AAT---------TAAA
TGATGGATGGGCAATGCATA----TATTG----TGTGTATAAATAAAATGGAAATGCCCAGC----------CGCACGTT
TTCA---CAAATCACACAAGC------------GAATCGCGCGCGATGGAGGTGACGTTCGAGACGACGCAGGGTCGCCG
ATTCACCGTCGAGATCTGGTACTTGTCCACCGTGCGGAGGATCAAGGAGTACATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGCCTCTTCTTCCATGGCCAGGAGCTCGAGGACGACCGCGACACCCAGCACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGACGACTCCCCCACT---------------------------------------GCCGC
---CGGCGCCGTCGTCCACGTCGTCGCCTCCGGGCCGGCCCTCGGCCAGGGCCGCCGCATCGCGCTCGAACTGGACGCGT
CCTGCACCATCGCCCGCCTCAAGGAGATGCTCCAGGAGCGCACAGACGGGGCGGTGCCGGCCACAAAGGTGAGCGTGTTC
TTGGAGGAGGCGGAGATGGAGGATGACAAGGAGCTGGCGCAGTTCAACCCGCCG---GCCGA---TGGGACGGAGATGGA
GGTGCGCGTGGTCGTGCGCCAGCCGCCGC---CGCCGCCGCCAGCGTGCGACAACGGGAACGGGGCGGCCAA------GG
TTAA---CAAGCCGCAGCAGCGGATGTCTGTGGAGGTGAAGTGGGGCGCCAAGGCGGTGACGTTGGAGGTGAGCGACATG
GACGCCGTCAAGGAGCTGCGGGCGGAGCTGGGCGGCGCGGCGCCGCACCTCCTCCTGCCCGACGACGGCGCCTACTTCTT
CATCTACAAGCAGAATGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGAGCGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGATC------------------------CAT------CACACATG-CATGTTC
CGT----C---CATCAGGT-----TTATAGATCTGCATTGAC----CATTGTTGAGTCGTTGTGTTGCATGGCACTCT--
--TA------------TCATTTCTTTCGTGCAAATTGGTGTAAT---GTTGAGTTAATGATCCTGAA----AAAAAAGTG
ATTGCACCTGAAGATCCTATTTGTTGGGTTCAGATGTTAACAAGAGGACCTATTCCTTTGCTC---------CTAACTTT
GCGTCTCTGATTTTGGGCAATTATCAACGGAACAATCGGGCAACTCCAACGATCGGT---------GATACTTCCATTTA
TTTACAATAATAATGTGCCCGTGCTTTGCTATATACTCCGAATATGAGCAGGGGGAAATGGTAAGCTCTCCACGTTTTTT
TAGGGGGTAAGCTCTCCACTTAAAGAGGATTATTTGATCTCAACCGTCAAACT---------------------------
----------------------------------------------------GCTCAAGGGTAAGCTGGGCTATGGATGA
AAAT-GAGCGGAAACTTTCCGCCTTTCCGGCCGAAAAACGATAACATAGAGGAAAAACGGAAATGAAAACGGA-------
-------------AAATAGAATATATTTTGTGCGGAAACGGAAATGCAAACGGAACATCGTTTTCTGGTGAAACAGATGC
GGAAACCGAATTTTCTGTTTCCGTTAA-------TACGAAACCTTGCATTTTAAAAATGAACATATGGCTATTTTGCAGT
CCAATAAACACATAA-----TTAGTCCCTACACATAATGAGCAGAATGGACTATATG-------CCCCAACTTCAACTGT
ACTACT--------------------ACTACAT----CACGACAGCCTAATACCTAATCCCTAATCGAGCCCATATGGCC
CAACTTCAAAATATGTCGCTGGTATGAGCACTATTGTGATTTGAGCT-GCAATGTTTGATTGTTTGATGCCTTTCAAATT
TTTATGCTGCCAAAGTTGAATATTTATGCACAAATGAATATCTTATTATATATTTATATATCAATGATATATATTAAGAT
TTTGTAATCATTTTATCCACTAAATAAATTTGTTGGTTTCATTGTGTTTTTTCTATGGTTC
>chr5D_257
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----------------AGAAGGATTTTGGCATCAACTCTTCAACTAAACCT-GGCATTACTTGGGCAGGTTATAT-----
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-----------------AAAGCCCAACCGCAAAAACCCGAGCCCGGTTCTAAGCAATTAAAGTGTGCACGTTTGCTATTA
AATAAAATTATTTAAATTATTTGTGGGCAGTATAGATGTAGTTCAATTAAACTCTGTTTTTGAGGTAATTCAGGC-TTCT
GGGCCGGGCCATCAAGCCTATATCTGGAGCCCAAGCTCAGCCCGACCGTCCGGCCTGGCTGCCCATGCCCAGGTTTATCC
GAGAGAGATCATATTCTCAAAAAAGGAAAAAAAACCGAGAGAGATCATGTGTCATCATGCAT------------------
-----------------------------------------GGATGCATGCACATTAACATATCTCAGAATATTTTGTT-
-ATAAATGCTTGTACAATAATTTTTGCAGATATGAGAATAACAGCGAGTAT-TACGATGGATGGAAATTTTGTTGTAAAA
GCCCGTACATTAATTTT-ACACATATGG--TAAATGCTAT--CTGAGAATAT----TTGTTATAAATGCCTATATATTGT
A---CCTCTACTGG-----TGGAAAATGTAACCTTA--------ATTTTAATGA---------ATAC-----GTAGGCAC
TTTAAGCGGTCAAAATAAACAAATCGGAGAATAAT-------AACATCGAG--TAATTA-----AAT---------TAAA
TGATGGATGTGCAATGCATACTCCTATTG----TGTGTATAAATAAAATGGAAATGCAACGC----------CGCACGTT
TTCA---CAAACCACACAAGC------------GAATCGCGCGCGATGGAGGTGACGTTCGAGACGACGCAGGGTCGCCG
ATTCACCGTCGAGATTTGGTACTTGTCCACCGTGCGGAGGATCAAGGAGTACATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGCCTCTTCTTCCATGGCCAGGAGCTCGAGGACGACCGCGACACCCGGCACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGATGACTCCCCCACT---------------------------------------GCCGC
---CGGCGCCGTCGTCCGCGTCGTCGCCTCCGGGCCGGCCCTCGGCCAGGGCCGGCGCATCGCGCTCGACCTGGACGCGT
CCTGCACCATCGCCCGCCTGAAGGAGTTGCTCCAGGAGCGCACAGACGGGGCGGTGCCGGCCACAACGGTGAGCGTGTTC
TTGGAGAAGGCGGAGATGGAGGATCACAAGGAGCTGGCGCAGTTCAACCCGCCG---GCCGA---CGGGATGGAGATGGA
GGTGCGCGTGGTCGTGCGCCAGCCGCCGC---CG---CCGCCAGTGTGCAACGACGGGAACGGGGTGGCCAA------GG
TTAA---CAAGCCGCAGCAGCGGATGTCTGTGGAGGTGAAGTGGGGCGCCAAGGCCGTGACGTTGGAGGTGAGCGACATG
GACGCCGTCAAGGAGCTGCGGGCGGAGCTGGGCAGCGCGGCGCCGCACCTCCTCCTGCCGGACGACGGCGCCTACTTCTT
CATCTACAAGCAGAATGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGAGCGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGATT------------------------CAT----CACACACATG-CATGTTC
CGT----CGATCATCAGGT-----TTACAGATCTGCATTGGC----CATTG---AGTCGTTATGTTGCATGGCACTCT--
--TA------------TCATTTCTTTCGTGCAAATTGGTGTAAT---GTTGAGTTAACGATCCTGAA----AGAAAAAGG
ATTACACCTGAAGATCCTATTTGTTGGGTTAAGATGTTAACAAGATCGAAGACCTATT----------------------
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--------------------------------------------------------------------------TTTTTT
TAGGGGGTAAGCTCTCCACTTAA-GAGGATTATTTAATCTCAAACGTCAAACT---------------------------
----------------------------------------------------GATCAAGGGTAAGCTGTGGTAGGGATGA
AAATGGAGCCGAAACTTTCCGCCTTTCTGGTG--------------------------------------------TTGC
AAAACGGAAACAGAAATAGAATATTTTTTATGCGGAAACACGGAACAGCGT------TTGTTTTTCAGTGAAACAGGTGC
GGAAACCGAATCTTCTGTTTCCATTAATACTTAATACTGAACTTTTCATTTTAAATATGAACATATGGCTATTTTGTCGC
CTAACAAACACATAA-----TT-----------ATAATGAGCGGAATGGACTATATG-------GCCCAACTTCAACGGT
ACTACT--------------------ACTACATCTAGTATGACAGCCTGATACCTAATCCTTAATGC-GCCCATATGGCC
CAACTTCAAAATATGTCGCTGGTACGAGCACTATTGTGATTTGAGCT-GCAACGTTTAATCGTTTGATGCCCTTCAAATT
TTTATGCTGCCAAAGTTGAATATTTATGCACAAATGAATATCTT--------TTTATATATCAATGATATATATTAAGAT
TTTGTAATCATCCTATCCGCTAAACAATGTGTT----------------------------
>chr5D_257
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----------------AGAAGGACTTTGGCATCAACTCTTCAACTAAACCAAGACATTACTTGGGCTGCTATATAAAGCT
TTAGTTTACCTGACCCAGCCGTCGCCAGGGTTTCTTCTGCCTCCTGCTGACGCCGGTCTACCTCGTCGTGTGGCCTTAGG
GCTATGGAGGCGTGATGGATCCCGGTCTTTGTCAATGAGAGGGCTTTGTTTTTGGATGCTTTTCTAAGTTTTCTTAGGGT
TTGTGTCTTGCTCAGAGAGACGACAAGGCGGCGGCGGCTCTCTAAAGATAGAATAAGTTTCTCCCTGCCTAGCTCCCATA
CCGGTGGTGCTTTTAGTGTCATCGGAGGGCGTGTGGAGGTTTGTCTTCGACGGATCTTGCGGGATTCGGTTGGTGTTTGT
CTTCGGTGGATGCACGTGGATCCGGTATTTGCTCGTTTATTTTCGTGTGTCTACAAGATGGATCCTTCCGATCTGAACTT
CTCTTCAACGGTGACAGTTGTTGTTCTGTGCGCTGGTCCTATAAAGTCTTAGCATGACGACTTCCCGACTGTCTACTACA
ACAAGTTTTGCCGGCTCCAGTGAGGGAGGGGCAATGACGGCGGCGTGCCTTCGGCTGGCTTCAGTGCTTGTAGTCGTCGC
TAGGTGTCTATGAATCTGGATGTAATTTTATTATTTCTGGTATTCGTTGTACTATCATGATTGATGATGGATAGATTGGA
AGATTATCGCTAAAATAAAAGCTCGAACCTAGAAACCCGAACCCGGTTCTAAACAATTAAAATGCGCACTTTTCCTATTA
GATAAAATTATTTTAATTATTTTTGGGCATTATAGTTGTAG-----TTAACCTCTAGTTTTAAGGTAACTCGGGC-TTCT
AGGCCGGGCCATCGAGCTTATATCTAAAGCCCAAGCTCGGCCTGACCATCAGGCCCGGCTGCCCATGCCCAAGTTTAT--
----------------------------------TTGAGAGAGATCATGTGTCAACATGCAATTTCCCAAAAAAAGAGTG
TCATCATGCAATCGATGCATTTGTCTCAAAAAAGATGCAATGGTTGCATGC------ACATATCTTAGAATATATTTTC-
-ACAAATGCTTGCACAATATTTTG-GCAGATATCTGAATAACATCAAGTAAATACAATGAATGCAAATATTGTTATAAAT
GCACGTACATTAATTTTTACACATATGGTAT----GCTAT--CTAAGAA-TATATGTTATTAATAATGCCTATATATTGT
ACCTCCTCTACTGG-----TGAAAGATGTAATCTTA--------ATTTTAATGA---------ATAGTATAAAGAGGCAC
TTTAAGCGGTCAA-------------------AAG-------AAATCTGAGGATAATAACAT-GGAG---------TAAA
TGATGGATGTGCAATGCATA----TATTG----TGTGTGTATAAATAA---AAATGCCCGGC----------CGCACGTT
TTCA---CAAATCACAGAAGG------------GAAA----CGCGATGGAGGTGACGTTCGAGACGACGCAGGGCCGCCG
ATTCGTCGTCGAGATTTGGTATTTCTCCACCGTGCGGAGGATCAAGGAGTACATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGCCTCTTCTTCCAGGGCAAGGAGCTCGAGGACGACCGCGACACCGAGTACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGATGGCTCTCCCGCCGCCGCCGTCACCGCCGCCGCTGACGGCCATGCCGCAGGCGCCCC
---CGGCGCCGTCGTCCATGTCGTCGCCTCCGGGCCGGCCCTCGGCCAGGGCCGCAGCGTCGCGCTCGAACTGGACGCGT
CCTGCACCGTCGCCCGTCTCAAGGAGATGCTCCAGGAGCGCACGGACGGCGCGCTGCCCGCCACCAAGGTGAGCGTGTTC
TTGGACAAGGCCGAGATGGAGGATGACAAGGCGCTGGTGGAGTTCGAGCCGTCGTCGGCTGA---GGGAATGAAGATGGA
GGTGCGCGTGGTCGTGCGCCAGCCGCCGC---CG---TCGCCAGCGTGCAACAACGGGAACGGGGCGGCCAA------GG
TTAATAACAAGCTGCAGCAGAGGATGTCTGTGGAGGTCAAGTGGGGCGCCAAGACCGCGACGCTGGAGGTGAGCGACATG
GACGCCGTCAAGGAGCTGCGGGCGGAGCTGGGCAGCGCGGCGCCGCACCTCCTCCTGCCCAACGACGGCGCCTACTTCTT
CATCTACAAGCAGAACGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGACCGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGATA------------------------TGTTCATCACACACATCACATGTTC
CGT----C---CATCAGGT-----TTACAGATCTGCATTGAC----CATTG---AGTCTTTATGTTGCATGCATGGTACT
CCA--------TCATTTCATTTCTTTCGTGCAAATTGGTGTAAT---GTTGA----------------------------
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>chrUn_312
ATAAAAGCT-----------------------------------------------------------------------
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-----------------------CGACCCCTGAAACCCGAACCCGGTTCTAAACAATTAAAACACACACTTTTCCTATTA
GATAAAATTATTTTAATTATTTTTGGGCATTATAGCTGTAG-----TTAAACTCTATTTTTAAGGTAACTCGGGCTTTCT
AGGCCACGCTATCAAGGTTATATCTGAAGCCCAAGCCCGGCCTGACCATCAGGCCCGGCTAACCATGCCCAAGTTTATTC
AAGAGAGATTATGTTGCCTC-------AAAAAAATTGAGAGAGATTATGTGTCATCATGCAATTTCTTCAAAAAA-AGTG
TCATCAT------GATGCATTTGTCTTAAAAAA-ATTCAATCGATGCATGC------ACATATC-TAGAATATATTTTC-
-ATAAGTGCTTGCACAATAATTTTTGCAGATATCTGAATAACATCAAGTAAATACAATGAATGCAAATATTGTTATAAAT
GCACGTACATTAATTATTACACATACGGTAT--ATGCTAT--CTGAGAATTATATGTTATTAATAATGCCTATATATTTT
ACCTCCTCTACTGG-----TGAAAGATGTAATCTTA--------ATTTTAATGA---------ATAATATAAGGAGGCAT
TTTAAGCGGTCAA----------------------------CAAATCTGAGGACAATAACAT-GAAG---------TAAA
TGATGGATGTGCAATGCATA----TATTG----TGTGTGTATAAATAA---AA-TGCCCGGC----------CGCACGTT
TTCA---CAAATCACACAAGG------------GAAA----CGCGATGGAGGTGACGTTCGAGACCACGCAGGGCCGCCG
ATTCAACGTCGAGATTTGGTATTTCTCCACCGTGCGGAGGATCAAGGAGTACATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGGCTCTTCTTCCAGGGCAAGGAGCTCGAGGACGACCGCGACACGGAGCACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGATGGCTCTCCCGCCGTCGCCGTCG---------CTGACGGCCATGCCGCAGGCGCCCC
CGGCGGCGCCGTTGTCCACATCGTCGCCTCCGGGCCGGCCCTCGGGCAGGGCCGCAGCGTCGCGCTCGAACTGGACGCGT
CCTGCACGGTCGCCCGACTCAAGGAGATGCTCCAGGAGCGCACGGACGGGGCGGTAACGGCCACTAAGGTGAGCGTGTTC
TTGGACAAGACCGAGATGGAGGATGACAAGGCGCTGGCGGAGTTCGAGCCGTCGTTGGCTGA---GGGAATGAAGATGGA
GGTGCGCGTGGTCGTGCGCGAGCCGCCGGCGTCG---TCGCCAGCGTGCAACAACGGGAACGGGGCGGCCAA------GG
TTAATAACAAGCTGCAGCAGCGGATGTCGGTGGAGGTGAAGTGGGGCGCCAAGACCGCGACGGTGGAGGTGAGCGACATG
GACGCCGTGAAGGAGCTGCGGGCGGAGCTGGGCAGCGCGGCGCCGCACCTCCTGCTGCCCAACGACGGCGCCTACTTCTT
CATCTACAAGCAGAACGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGAGCGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGACATCTTTTGTTCTTGTTCATCACACACAT------CTCACATG-CATGCTC
CGTACGCC---CA-------------------------TCACCATGCATTG---AGTCGTTATGTTGCATGCATGGTAAT
A-TCGATCATTTCATTTCATTTCTTTCGTGCAAATTGCTGTAATCTAGTTGAGTTAACGCTCCTGAAGAATAAAAAAATG
ATTGCACCTGAAGATCCTATTTGTTGGGTTAAGATGTCAACAAGATGACCTATTCCTTTGCTC---------CT------
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>chrUn_312
ATAAAAGCT-----------------------------------------------------------------------
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-----------------------CGACCCCTGAAACCCGAACCCGGTTCTAAACAATTAAAACACACACTTTTCCTATTA
GATAAAATTATTTTAATTATTTTTGGGCATTATAGCTGTAG-----TTAAACTCTATTTTTAAGGTAACTCGGGCTTTCT
AGGCCACGCTATCAAGGTTATATCTGAAGCCCAAGCCCGGCCTGACCATCAGGCCCGGCTAACCATGCCCAAGTTTATTC
AAGAGAGATTATGTTGCCTC-------AAAAAAATTGAGAGAGATTATGTGTCATCATGCAATTTCTTCAAAAAA-AGTG
TCATCAT------GATGCATTTGTCTTAAAAAA-ATTCAATCGATGCATGC------ACATATC-TAGAATATATTTTC-
-ATAAGTGCTTGCACAATAATTTTTGCAGATATCTGAATAACATCAAGTAAATACAATGAATGCAAATATTGTTATAAAT
GCACGTACATTAATTATTACACATACGGTAT--ATGCTAT--CTGAGAATTATATGTTATTAATAATGCCTATATATTTT
ACCTCCTCTACTGG-----TGAAAGATGTAATCTTA--------ATTTTAATGA---------ATAATATAAGGAGGCAT
TTTAAGCGGTCAA----------------------------CAAATCTGAGGACAATAACAT-GAAG---------TAAA
TGATGGATGTGCAATGCATA----TATTG----TGTGTGTATAAATAA---AA-TGCCCGGC----------CGCACGTT
TTCA---CAAATCACACAAGG------------GAAA----CGCGATGGAGGTGACGTTCGAGACCACGCAGGGCCGCCG
ATTCAACGTCGAGATTTGGTATTTCTCCACCGTGCGGAGGATCAAGGAGTACATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGGCTCTTCTTCCAGGGCAAGGAGCTCGAGGACGACCGCGACACGGAGCACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGATGGCTCTCCCGCCGTCGCCGTCG---------CTGACGGCCATGCCGCAGGCGCCCC
CGGCGGCGCCGTTGTCCACATCGTCGCCTCCGGGCCGGCCCTCGGGCAGGGCCGCAGCGTCGCGCTCGAACTGGACGCGT
CCTGCACGGTCGCCCGACTCAAGGAGATGCTCCAGGAGCGCACGGACGGGGCGGTAACGGCCACTAAGGTGAGCGTGTTC
TTGGACAAGACCGAGATGGAGGATGACAAGGCGCTGGCGGAGTTCGAGCCGTCGTTGGCTGA---GGGAATGAAGATGGA
GGTGCGCGTGGTCGTGCGCGAGCCGCCGGCGTCG---TCGCCAGCGTGCAACAACGGGAACGGGGCGGCCAA------GG
TTAATAACAAGCTGCAGCAGCGGATGTCGGTGGAGGTGAAGTGGGGCGCCAAGACCGCGACGGTGGAGGTGAGCGACATG
GACGCCGTGAAGGAGCTGCGGGCGGAGCTGGGCAGCGCGGCGCCGCACCTCCTGCTGCCCAACGACGGCGCCTACTTCTT
CATCTACAAGCAGAACGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGAGCGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGACATCTTTTGTTCTTGTTCATCACACACAT------CTCACATG-CATGCTC
CGTACGCC---CA-------------------------TCACCATGCATTG---AGTCGTTATGTTGCATGCATGGTAAT
A-TCGATCATTTCATTTCATTTCTTTCGTGCAAATTGCTGTAATCTAGTTGAGTTAACGCTCCTGAAGAATAAAAAAATG
ATTGCACCTGAAGATCCTATTTGTTGGGTTAAGATGTCAACAAGATGACCTATTCCTTTGCTC---------CT------
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>chr5A_614
ATCGATGCATC---------------------------------------------------------------------
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-------------------------------------------ATGCATGC------ACATATCTTAGAATATATTTTC-
-ATAAATGCTTGCACAATAATTTT-GCAGATATCAGAATATCATCGAGTAAAAA-AATGGATGCAAATTTTGTTATAAAT
GCACGTACATTAATTTTCACACATATGGTAT----GTTATATCTGAGAATAT----ATGTTATAAATGCCTATATATTGC
A---CCTCTACTGGCGTGGTGAAAGATGTAACTTAATAATAATCATATTAATGA-----------AATATAAGGAGGCAC
TTTAAGCGGTCAA-------------------AAG-------AAATCTGAGAATAATAACATGGGAG---------TAAA
TGATGGATGTGCAATGCC-A----TATAT----TGTGTGTATAAATAA---AA-TGCTCGGC----------CGCACGTT
TTCTTCACAAATCACACAAGCGGCT--------GAAT----TGCGATGGAGGTGACGTTCGAGACGACGCAGGGCCGCCG
ATTCGTCGTCGAGATTTGGTATTTCTCCACCGTGCGGAGGATCAAGGAGTACATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGGCTCTTCTTCCAGGGCAAGGAGCTCGACGACGACCGCGACACCGAGCACTACCCCATCCTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGATGAATCTCCCGCTGCCGCCGCCGTCGCCGCCGCTGACGGCCATGCTGCAAGCGCCCC
---CGGCGCCGTCGTCCACGCCGTCGCCCCCGGGCCGGCCCTCGGCCAGGGCCGCAGCGTCGCGCTTGAACTGGACGCGT
CCTGCACGGTCGCCCGCCTCAAGGAGACGCTCCAGGAGCGTACGGACGGCGCGCTTCCCGCCGCCAAGGTGAGCGTGTTC
TTGGACAAGGCCGAGATGGAGGATGACAAGGCGCTGGCGGAGTTCCAGCCGCCG---GCCGA---TGGGATGAAGATGGA
GGTGCGCGTAGTCGTGCGCCAGCCGCCGC---CG---TCGCCAGCGTGCAACAACGGGAACGGGGTGGCCAATTGCAAGG
TTAA---CA---------AGCGGATGTCGGTGGAGGTGAAATGGGGTGCCAAGACCGCGACGCTGGAGGTGAGCGACATG
GACGCCGTCAAGGAGCTGCGGGCGGAGCTGGGCAGCGCGGCGCCGCACCTGCTCCTGCCCAACGACGGCGCCTACTTCTT
CATCTACAAGCAGAACGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGACCGGCGACACCATCGAGATAT
TCAACGGCAGGGTCACCGGAGGCGCTTGAT--------------------------------------------------
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>chrUn_617
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----------------------------------ATGCAATCGATGCATGC------ACATATC-TAGAATATATTTTC-
-ATAAATGCTTGCACAATAATTTTTGCAGATATCTGAATAACATCAAGTAAATACAATAAATGCAAATATTGTTATAAAT
GCACGTACATTAATTTTTACACATACGGTAT----GCTAT--CTGAGAATTATATGTTATTAATAATGCCTATATATTGT
A---CCTCTACTGA-----TGAAAGATGTAATCTTA--------ATTTTAATGA---------ATAATATAAGGAGGCAC
TTTAAGCGGTCAA-------------------AAT-------AAATCTGAGCATAATAACAT-GGAG---------TAAA
TGATGTATGTGCAATGC--A----TATAT----TGTGTGCATAAATAA---AA-TGCCGGGC----------CTCGCGTC
TTCA---GAAATCACACAAGCGGCT--------GAAT----CGCGATGGAGGTGACGTTCGAGACGACGCAGGGCCGCCG
ATTCATCGTCGAGATTTGGTACTTCTCCACCGTGCGGAGGATCAAGGAGTGCATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGGCTCTTCTTCCAGGGCAAGGAGCTCGAGGACGACCACGACACGGAGCACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGATGGCTCTCCCGCCGCCGCCGTCGCCGCCACCGCTGACGGCCATGCCACAGGCGCCCC
---AGGCGCCGTCGTCCATGTCGTTGCCTCCGGGCCGGCCCTTGGCCAGGGCCGCAGCGTTGCGCTCGAACTGGACGCGT
CCTGCACGGTCGCCCGACTGAAGGAGATGCTCCAGGAGAGCACGGATGGGGCGCTGCCTGCCGCCAAGGTGAGCGTGTTC
ATGGACAAGGCCGAGATGGAGGATGACAAGGCGCTGGCGGAGTTCGACCCGCCG---GCCGA---TGGGACGAAGATAGA
GGTGCGCGTGGTCGTGCGCCAGCCGCCGGCGTCG---TCGCCAGCGAGCAACAACGGGAACGGGGCGGCCAA------GG
TTAATAACAAGCTGCAGCAGCGGATGTCGGTGGAGGTGAAGTGGGGCGCCAAGACCGCGACGCTGGAGGTGAGCGACATG
GACGCCGTGAAGGAGCTGCGGGCGGAGCTGGGCAGCGCGGCGCCGCACCTCCTCCTGCCCAACGACGGCGCCTACTTCTT
CATCTACAAGCAGAACGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGAACGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGACATCTTTTGTTCTTGTTCATCCCACACAT------CTCACATG-CATGCTC
CGTACGTC---CATCAGGTTTACATTACAGATCTGCATTCACCATGCATTG---AGTCGTTATGTTGCATGCATGGTAAT
ACTCTATCAGTTCATTTCATTTCTTTCGTGCAAATTGCTGTAATCTAGTTGAGTTAACGCTCCTGAAGAATAAAAAAATG
ATTGCACCTGAAGATCCTATTTGTTGGGTTAAGATGTCAACAAGATGACCTATTCCTTTGCTC---------CT------
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>chr5A_623
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-----------------------------------------GGATGCATGC------ACATATCTCAGAATATTTTGTTA
TATAAATGCTTGCACAATAATTTTTGCAGATATGAGAATAACATCGAGTAT-TACGATGGATGGAAATTTTGTTATAAAG
GCCCGTACATTAATTTT-ACACGTATGG--T--GTGCTAT--CTGAGAATAT----ATGTTATAAATGCCTATGTATTGT
A---CCTCTGCTGG-----TGAAAAA--TAACCTTA--------ATTTTAATGAATATACTGTATAATATAAGGAGGCAC
TTTAAGCCGTCAA-------------------ATAAATAAACAAATCTGTGAATAATAACAT-CAAGTAATTAAAATAAA
TGATGGATGTGCAATGC--A----TATATGTATTGTGTGTATAAATAA---AA-TGGAAATGCCCGGCCGCACGCACGTT
TTCA---CAAATCACACAAGC------------GAATCGCGCGCGATGGAGGTGACGTTCGAGACGACGCAGGGTCGCCG
ATTCACCGTCGAGATCTGGTACTTGTCCACCGTGCGGAGGATCAAGGAGTACATCCTGAGGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGCCTCTTCTTCCAGGGCCAGGAGCTCCAGGACGACCGCGACACCCAGCACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGATGACTCCCCCACC---------------------------------------ACCGC
---CGGCGCCGTCGTCCGCGTCGTCGCCTCCGGGCCGGCCCTCGGCCAGGGCCGCCGCATCGTGCTCGAACTGGACGCGT
CGTGCACCGTCGCCCGCCTCAAGGAGGTGCTCCAGGAGCGCACGGACGGGGCGGTGCCGGCCACGATGGTGAGCGTGTTC
TTGGAGAAGGCGGAGATGGAGGACGACAAGGAGCTGGCGCAGTTCGACCCGCCG---GTCGA---CGGGATGGAGATGGA
GGTGCGCGTGGTCGCGCGCCAGCCGCCGC---CG---CCGCCGGCGTGCAACGACGGGAACGGGGCGGCCAA------GG
TTAATAACAAGCTGCAGCAGCGGATGTCTGTGGAGGTGAAGTGGGGCGCCAGGGCCGTGACGTTGGAGGTGAGCGACATG
GACGCCGTCAAGGAGCTGCGGGCGGAGCTGGGCAGCGGGGCGCCGCACCTCCTCCTGCCGGACGACGGCGCCTACTTCTT
CATCTACAAGCAGAATGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGGCCGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGATT------------------------CATCGATCACACACATG-CATGTTC
CGT----C---GATCAGGT-----TTACAGATCTGCATTGAC----CATTGTTGAGTCGTTATGCTGCATGGTACTCCAC
TCTA------------TCATTTCTTTCGTGCAAATTGGTGTAAT---GTTGAGTTACCGATCCTGAAG---AAAAAAATG
ATTACGCCTGAAGATCCTATTTGTTGGGTTAAGATGTTAACAAGAAGACCTATTCCTTTGCTCGGATTAATCCTAACTTT
GCGTCTCTGACTTCGGGCGATTATCAACGGAACAATCGGGGAACCCCAACGATCGGTCGCAAGGAAGATACTTCCATTTA
CAATA---AATAATGTGCCCGTGCTTTGATAT---------ATATGAGCAGGGGAAAATGGTAAGCTCTCCACC-TTTTT
TAGGGGGTATGCTCTCCACTTTA-GGGGTATGTTCATACGTAATACGATGTGATTTGTGAATGCCACGTGTCATCCATCA
GGATGCGTCTCACATATTAACCGTGAGACCTGGTCTCATATAATTTTTTTCCGATCTGGGGTAAGCTGGCGTAGGGATGA
AAATGGAGCGGAAACTATCCGCCTTTCTGACAGAAAAACAAAAAC-TAGAGGAAAAACGGAAATGGAAACGAAACTTTGC
AAAAAGGAAACGGAAATAGGATATTTTTTGTGCAAAAACGAAATA-CAAACTGAACATCGTTTTCCGATGCAACAGGTGT
GGAAACCAAGTTTTTTTCTG----------TTAATACGAAACTTTCCGTATTACGTATGAACATATGGCTATTTTGTAGC
CCAATAAACACATAAAGTAATTAGTCCCTACAAATAATGAGCGGAATGGACCATATAGGATATAGCCCAATTTCAACTTT
TTTTTTGAGACAATAGCCCAATTTCAACTACATCTAGCACGACAGCCTAATACCTAATCCCTAATCGAGCCCATATGGCC
CAACTTCAAACTATGTCGCTGGTATGAGCACTATTGTGATTTGAGCTTGCAATGTTTGATTGTTTGATGCCTTTCAAAAA
ATT-TGCTGTCAAAGTTGAATATTTATGCACAAATGGATATCTTA--------TTATATATCCATGATATATATTAAGAT
TTTGTAGTCATCTTATCCACTAAACAATTTTGTTGGTTTCATTGTGTTATTTCTA------
>chrUn_882
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--------------------------------AAT-------AAATCTGAGCATAATAACAT-GGAG---------TAAA
TGATGTATGTGCAATGC--A----TATAT----TGTGTGCATAAATAA---AA-TGCCGGGC----------CTCGCGTC
TTCA---GAAATCACACAAGCGGCT--------GAAT----CGCGATGGAGGTGACGTTCGAGACGACGCAGGGCCGCCG
ATTCATCGTCGAGATTTGGTACTTCTCCACCGTGCGGAGGATCAAGGAGTGCATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCCCAGCGGCTCTTCTTCCAGGGCAAGGAGCTCGAGGACGACCACGACACGGAGCACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGATGGCTCTCCCGCCGCCGCCGTCGCCGCCACCGCTGACGGCCATGCCACAGGCGCCCC
---AGGCGCCGTCGTCCATGTCGTTGCCTCCGGGCCGGCCCTTGGCCAGGGCCGCAGCGTTGCGCTCGAACTGGACGCGT
CCTGCACGGTCGCCCGACTGAAGGAGATGCTCCAGGAGAGCACGGATGGGGCGCTGCCTGCCGCCAAGGTGAGCGTGTTC
ATGGACAAGGCCGAGATGGAGGATGACAAGGCGCTGGCGGAGTTCGACCCGCCG---GCCGA---TGGGACGAAGATAGA
GGTGCGCGTGGTCGTGCGCCAGCCGCCGG---CGTCGTCGCCAGCGAGCAACAACGGGAACGGGGCGGCCAA------GG
TTAATAACAAGCTGCAGCAGCGGATGTCGGTGGAGGTGAAGTGGGGCGCCAAGACCGCGACGCTGGAGGTGAGCGACATG
GACGCCGTGAAGGAGCTGCGGGCGGAGCTGGGCAGCGCGGCGCCGCACCTCCTCCTGCCCAACGACGGCGCCTACTTCTT
CATCTACAAGCAGAACGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGAACGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGACATCTTTTGTTCTTGTTCATCCCACACAT------CTCACATG-CATGCTC
CGTACGTC---CATCAGGTTTACATTACAGATCTGCATTCACCATGCATTG---AGTCGTTATGTTGCATGCATGGTAAT
ACTCTATCAGTTCATTTCATTTCTTTCGTGCAAATTGCTGTAATCTAGTTGAGTTAACGCTCCTGAAGAATAAAAAAATG
ATTGCACCTGAAGATCCTATTTGTTGGGTTAAGATGTCAACAAGATGACCTATTCCTTTGCTC---------CT------
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>chr5A_905
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----------------------------------------------------------------------------TAAA
TGATGGGTGTGCAATGCC-------ATAT----ATTGTGTGTAAATAA---AA-TGTTCGGC----------CGCACGTT
TTCATCACAAATCACACAATGACACAAGCGATCGAAT----CGCGATGGAGGTGACGTTCGAGACGACGCAGGGTCGCCG
ATTCATCGTCGAGATTTGGTACTTCTCCACCGTGCGGAGGATCAAGGAGTGCATCCTGAAGCAGGAGGGCATCCCCGTGG
AGTCGCAGCGCCTCTTCTTCCAGGGCCAGGAGCTCGAGGACGACCGCGACACCGAGCACTACCCCATCGTGGAGGGATCC
CACGTGCTCATCGTCCTGCCGGATGAATCTCCCGCTGCCGCCGCCGTCGCCGCCGCTGACGGCCATGCTGCAAGCGCCCC
---CGGCGCCGTCGTCCACGTCGTCGCCTCCGGGCCGGCCCTCGGCGAGGGCCGCCGCGTCGCGCTCGAACTGGACGCGT
CCTGCACCGTCGCCCGCCTCAAGGAGATGCTCCAGGAGCGCACGGACGGCGCGGTGCCCGCCGCCAAGGTGAGCGTGTTC
TTGGAGAAGGCGGAGATGGAGGACGACAAGGAGCTGGCGCAGTTCAACCCGCCG---ACCGACGATGGGATGAAGATGGA
GGTGTGCGTGGTCCTGCGCCAGCCGC------CGCCGTCGCCAGCGTGCAACAACGGGAACGGGGTGGCCAATTGCAAGG
TTAA---CA---------AGCGTATGTCGGTGGAGGTAAAGTGGGGCGCCAAGACCGCGACCCTGGAGGTGAGCGACATG
GACGCCGTCAAGGAGCTGCGGGCGGAGCTGGGCAGCGCGGCGCCGCACCTCCTCCTGCCCAACGACGGCGCCTACTTCTT
CATCTACAAGCAGAACGTCATGGAGGAGGAGCGCACGCTGCGCTGGCACGACGTCAAGACCGGCGACACCATCGAGATCT
TCAACGGCAGGGTCACCGGAGGCGCTTGAT--------------------------------------------------
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>SNPs
S--SS--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS---------------------------------S-S--------------S-------------
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-----------------------------------------------S--S----------S------------------
----------------------------------S------S-S--S--------------------------S--S---
----------------------S-------S--S----------------------------------S----------S
S---------SSSSS-------------------------------------------------S----------S-SSS
SSS-SSSS--SSSSSSSS----------------------------------------------------------S---
-------------S--------------------------------S--------S------------------------
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-------------------S------------------------------------------------------------
----------S---S----------S---------------------SSSS-----------------------------
---------S----------------------------------------------------------------------
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-----------------------S--------------------------------------------------------
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------S-------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-------------------------------------------------------S------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
---------------------------S---------------------------------S------------------
---------------------------------------------------------S-------------------S--
------------------------------S--------------S----------------------------------
----------S--S----S---------------------S---S-----------------------------------
SSSSSSSS--------------------S---SSSSSSSSS-------------S------------------S------
-----------------------S-----------S-------S------------------------------------
-----------------------------------------------------S----------------S--S------
---------------------------S---S-------S-S---S-------------------S-----S--------
------------------------S---------------S---SS-----S-------------S----------S---
----------------------S-------------------S--S---------S--------------------S--S
--------------------------------S---------S---------------------S---------------
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---------------------------------------------SSSSSSS----------------------------
-----------S------------S--S--------------------S------SSSSSS
>forward_170
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----------------------------------------------------------------------CGCACATGTT
TTTGACCCGT----------------------------------------------------------------------
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>reverse_3077
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------------------------------------TCCGAATATGAGCAGGGGGA------------------------
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