>input_sequence_68302
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--------------------------------------------------------------ATGCAGGGAGCGCCGGTG
GACAGCCCGGGGGCGGCGGAGGCAGCGGCGCGGCCGAGCCGGTACGAGTCGCAGAAGCGCCGGGACTGGCACACTTTCGG
GCAGTACCTTCGCAACCACCGCCCGCCGCTGGAGCTCTCGCGGTGCAGCGGCGCCCACGTCCTCGAGTTCCTCCGCTACC
TCGACCAGTTCGGCAAGACCAAGGTCCACGCTCCAGGCTGCCCCTTCTTCGGCCACCCTTCCCCGCCGGCGCCCTGCCCT
TGCCCGCTCCGCCAGGCCTGGGGCAGCCTGGACGCGCTCGTCGGCCGCCTGCGCGCCGCCTTCGAGGAGCACGGCGGGCG
GCCCGAGGCCAACCCGTTCGGCGCGCGCGCCGTCCGCCTCTACCTCCGCGAGGTGCGCGACTCCCAGGCCAAGGCACGCG
GCATCGCCTACGAGAAGAAGCGCCGGAAGCGCCCGCCGCCGTCGTCGTCCCAGAAGGCGGCCAAGGCCGCGCCGTCCCCA
CCCCCACCCGCCTCCTCCCATGTAGCAGCGCCGCCCCCAGAGAGCGCGCCGGAGGTCCTCGTCGCGCGGGCCGTACCCGC
GCAGGGGCACTACTTCATCCCGCACCCGCAGCACTACATGCACGCGCATTTCCTGATGCCAGGCGGCCACGACGCAGACG
CCGCCGTCCCGAACAGCTCCAGCGGCAACAGCAACGGCCACAGCAATGGCCACAGCGGCGGCACGGGCGACGAGATGGCC
ATAGCGATGGCGGCAGCGGCGGAGGCGCACGCGGCGGGGTGCATGCTGCCGCTCTCCGTGTTCAACTAG-----------
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>chr7B_1_TraesCS7B01G367400
CATAAATCGCATGCAGAAATACAAACACGGGCGGCCGGGTGGGTGCA----TACGTACGTAGATACATCAGGAACACTGT
TGCACCTGCCGTGGGCTTAAATGATTGGGGTCACTCACCGCCACCGGTCAGGTCGGTCTCCGTCTCCTCACTCA--CTCA
CCCGCCCGCATCATCAA-AAAGCTAGCTACAGTAGCTAGCTAGCTCCCCCCAGCTCAATTCCGTCCCCTCACCCCCACAA
CAGCTTTCCCACGGCTCCCCTTCCCCCTCCA----CCCGTGTCACGGCTATCTACCCACCTATATACACGCACCCCCGCC
CACCCTACTGCCCCTCCTCCCTCTGCTCCTCCTCCCCTCGCCACCACACCCAATCGCCCGCTCGCTCCCCCGGCTCGGCA
ACGATCGATCTCTCCTTCTACCCGAGCTGCTCCGTCGTCCGGACGGCGCCGTCGACCGCGCGCTTGCCAGGTAAGATGTG
TGGTCGATCTTCCTCGTACTGTAGCTCCGGGCCCTCCGGCGGCCAGCGGTTAGCTGCTGGTTGTGCGGCTGAGGTGACCG
CGGTCCAGCGGGTGCGCGCGCGCGTGTGT--CAGTTTCTTGGCTGATGCTGCTGTGCTGCAGCGGCCGAGCT---CAGAT
TCAGGCCGTCTTGGATGCCACGCTCTGGT----CCGGGCCTGCACCGTACTTCAAGCTAGCTCAAGACCAGCTGCTGCTG
ATCCACTTCGATTCCCCCTTTGGGAAACCCTAGAGTCAGATTTTCGTGCGCCCTCGAGAAACATGGCGTGTACAGCTACA
GGCTCTGGCTGATGCTTAGCTTGATTCGTCAGCTCACC--ATGAGCTGAGCTGAAGGACCGACCAATGAACCATGCTGCG
AACTGATGAGCAGCTAGCTCACTGGCTGGCTGCTGATTGATAATTAAGATGCTTTTGGTTTTAGGCAGCTCTGTGTGACC
GCGTGTACTAACGGGCGGCCGTCTCGCATGCAGATCTGAAGTCAAAGGAGGAGAGGACGGACATGCAGGGAGCGCCGGTG
GACAGCCCGGGGGCGGCGGAGGCAGCGGCGCGGCCGAGCCGGTACGAGTCGCAGAAGCGCCGGGACTGGCACACTTTCGG
GCAGTACCTTCGCAACCACCGCCCGCCGCTGGAGCTCTCGCGGTGCAGCGGCGCCCACGTCCTCGAGTTCCTCCGCTACC
TCGACCAGTTCGGCAAGACCAAGGTCCACGCTCCAGGCTGCCCCTTCTTCGGCCACCCTTCCCCGCCGGCGCCCTGCCCT
TGCCCGCTCCGCCAGGCCTGGGGCAGCCTGGACGCGCTCGTCGGCCGCCTGCGCGCCGCCTTCGAGGAGCACGGCGGGCG
GCCCGAGGCCAACCCGTTCGGCGCGCGCGCCGTCCGCCTCTACCTCCGCGAGGTGCGCGACTCCCAGGCCAAGGCACGCG
GCATCGCCTACGAGAAGAAGCGCCGGAAGCGCCCGCCGCCGTCGTCGTCCCAGAAGGCGGCCAAGGCCGCGCCGTCCCCA
CCCCCACCCGCCTCCTCCCATGTAGCAGCGCCGCCCCCAGAGAGCGCGCCGGAGGTCCTCGTCGCGCGGGCCGTACCCGC
GCAGGGGCACTACTTCATCCCGCACCCGCAGCACTACATGCACGCGCATTTCCTGATGCCAGGCGGCCACGACGCAGACG
CCGCCGTCCCGAACAGCTCCAGCGGCAACAGCAACGGCCACAGCAATGGCCACAGCGGCGGCACGGGCGACGAGATGGCC
ATAGCGATGGCGGCAGCGGCGGAGGCGCACGCGGCGGGGTGCATGCTGCCGCTCTCCGTGTTCAACTAGCGAGCTTTCCG
GCCGCACCCATGGATGCGATCCTAGCAAAAGCAATCGCAAGGTAGGGCTTAAGTAAGTTAATTCGGAGGTCTATATATCT
AGCCGTAATCTTGATCGATCATTGGAACGATGGAAGGATGAGTGTCATC--GATCGATCGATGAACGTACTATTGTTCTT
CTTACCAA-CACTATTCACCCTTTTGGCTACATTTCCTGCTGGGAGCTAGTGGTGCTCCTCCTCCTTGCTACTGTAGGGT
TTCTACTTTCTAGCAGCGTTCGTGCATGCTTGGTTGATTTGTGTATGCAGATATAATTAATCCAAGGCTCGATTGAAATG
TCAAGGGGATTTCCACTGCTAGAATGTGCACTGCTGATTGATTGATTCATGGCTCCACGTATTTAATTTGTTGCGTTCTT
CCTGTTGTCGAACAGATCTTACTGATGTGCTGCTAGGATTTTAATTTGTTCTTATGACTAGCATTG-CATGACATTTTCT
GCAGAATTT-------------------TGCGTCATCTGTATGTTTCATCTTTCTTTTATTT-----GCTTTGATTTCTC
GTATGCTTTCACTGTATATTTCTGTATTTATGGGCAAGAAAAATTCTTGATTCATATGATATGATGTTGGTTGCGTGCTT
CCAATTGGTTTGCACGTTAGTGATCAAAAGGATATTGAATTTATATGATAAATCTTGCATGCATTTGCATAGAAAATCCG
CACGGCTACCATTGAAGTCTTTGCACATTTCTTCATTACAAGTGGGGCCTAAGACCATTTCCGATGCATCTTCTCTTAAC
ACCATATCTTAAAACATGTTAGATGTTTGGATACAACTATCTGGATGCATT-----------------------------
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--------------------------------------------------GTATCTGACATAGGTTTGGTATTTTATTGT
AGACCCTACTTTTATTAAGATTACTTGAGTCTAATTGGATGGTATAATGCGAGAGTTAATAATATACCAAATTGGTTTGC
GGGTGGAGACCGTATCTAAGATAAGAGACAGTTCTATCATGTGTTGCCATTAATTA
>chr7D_1
CATAAATCGCATGCAGAAATACAAACACGGGCGGGCGGGTGGGTGCATACGTACGTACGTAGATACATCAGGAACACTGT
TGCACCTGCCATGGGCTTAAATGATTGGGGTCACTCACCGCCACCGGTCAGGTCGGTCTCCGTCTCCCCACTCACTCTCA
CCCGCCCGCATCATCAACAAAGCTAGCTACAGTAGCTAGCTAGCTCCCCCCAGCTCAATTCCGTCCCCTCACCCCCACAG
CAGCTTTCCCACGGCTCCCCTCCCCCCTCCGCGCGCCCGTGCCGCGGCTATCTACCCACCTATATACACACACCCCCGCC
CACCCCACTGTCCCTCCTCCCTCTCCTCCTCCTCCCCTCGCCACCACACCCAATCGCCCGCTCGCTCCCTCGGCTCGGCG
TCGATCGATCTCTCCTTCTACCCGAGCTGCTCCGTCGTCCGGACGGCGCCGTCGACCGCGTGCTTGCCAGGTGAGATGTG
TGGTCGATCTTCCTCGTACTGTAGCTCCGGGCCCTCCGGCGGCCAGCGGCTAGCTGCTGGTTGTGCGGCTGAGGTGACCG
CGGTCCAGCGCGTGCGCGCGCGCGTGTGTGTCAGTTTCTTAGCTGATGCTGCTGTGCTGCAGCGGCCGAGCTCAGCAGAT
TCAGGCCGTCTTGGATGCCACGCTCTGGT----CCGGGCCTGCACCGTACTCCAAGCTAGCTCAGGACCAGCTGCTGCCG
ATCCACTTCGATTCCCCCTTTAGGAAACCCTAGTGTCAGATTTTCGTGCACCCTCGAGAGAGATAGCATGTACAGCTACA
GACTCTCGCCGATGCTTAGCTTGATTCGTCGGCTCACC--ATCAGCTGAGCTGAAGAACC------------ATGCCGCG
AACTGATGGGCAGCTAGCTCACTGGCTGGCTGCTGAGTGATAATTAAGATGCTTTTGGTTTCAGGCAGCTCCGTGTG---
-----TACTAACGGGCGGCCGTCTCGCATGCAGATCTGAAGTCAAAGCAGGAGAGGACGGACATGCAGGGAGCGCCGGTG
GACAGCCCGGGGGCGGCGGAGGCGGCGGCGCGGCCGAGCCGGTACGAGTCGCAGAAGCGCCGGGACTGGCACACGTTCGG
GCAGTACCTTCGCAACCACCGCCCGCCACTGGAGCTCTCGCGGTGCAGCGGCGCCCATGTCCTCGAGTTCCTCCGCTACC
TCGACCAGTTCGGCAAGACCAAGGTGCACGCCGCGGGCTGCCCCTTCTTCGGCCACCCTTCCCCGCCGGCGCCGTGCCCG
TGCCCACTCCGCCAGGCCTCGGGCAGCCTCGACGCGCTCGTCGGCCGCCTGCGCGCCGCCTTCGAGGAGCACGGCGGGCG
GCCCGAGGCCAACCCGTTCGGCGCGCGCGCCGTCCGCCTCTACCTCCGCGAGGTGCGCGACTCCCAGGCCAAGGCACGTG
GCATCGCCTACGAGAAGAAGCGCCGGAAGCGCCCGCCGCCGTCGTCGTCCCAGAAGGCGGCCAAGGCCGCGCCGTCCCCA
CCCCCACCCGCCTCCACGCATGTAGCAGCGCCGCCCCCAGAGAGAGCCCCGGAGGTCCTCGTCGCGCGGGCCGTGCCAGC
GCAGGGGCACTACTTCATCCCGCACCCGCAGCACTACATGCACGCGCATTTCCTGATGCCAGGCGGCCACGAGGCGGACG
CCGCCGTCCCGAGCAGCTCCAGCGGCAACAGCAACGGCCACAGCAATGGCCACAGCGGCGGCACCGGCGACGAGATGGCC
ATGGCGATGGCGGCAGCGGCGGAGGCGCACGCGGCGGGGTGCATGCTGCCGCTCTCCGTGTTCAACTAGCGAGCTTTCCG
GCCGCATCCATGGATGCGATCCTAGCAAAAGCAATCGCAAGGTAGGGCTTAAGTAAGTTAATTCGGAGGTCTATATATCT
AGCCGTAATCTTGATCGATCATTGGAACGATGGAAGGATGAGTGTCATCGAGATCGATCGATGAACGTACTATTGTTCTT
CTTACCAA-CACTATTCACCCTTTTGGCTACATTTCCTGCTGGGAGCTAGTGGTGCTCCTCCTCCTTGCTACTGTAGGGT
TTCTACTTTCTAGCAGCGTTCGTGCATGCTTGGTTGATTTGTGTATGCAGATATAATTAATCCAAGGCTCGATTGAAATG
TCAAGGGGATTTCCACTGCTAGAATGTGCACTGCTGATCGATTGATTCATGGCTCCATGCATTTAATTTGTTGCGTTCTT
CCTGTCGTTGAACAGATCTTACTGATGTGTTCCTAGGATTTTAACTTGTTCTTATGACTAGCATTGTCATGACATTTTCT
GCAGAATTT-------------------TGCGTCATCTGTATGTTTCATCTTTCT----TTTATTTTGCCTTGATTTCTC
GTATGCTTTCACTGTATATTTCTCTATCTGTGGGCAAGAAAAA-TCTTGATTCATATGATATGATGTTGGTTGCGTGCTT
CCAATTGGTTTGCACGTTGGTGATCAAAAGGATATCGAATTTATATGATAAATCTTGCATGGATTTGCATAGAAAATCCA
CACAGCTACCATTGAAGTCTTTGCACATTTCTTCATTACAAGTGGGGCCTAAGACCATTTCCGATGCATCTTCTCTTAAC
ACCATATCTTAATGCATGTTAGATGTTTGG--------------------------------------------------
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---------------------------------------------------TATCTGACAGGGGTTTGGTATTTCATTGT
AGACCCTACTTTTATTAAGATTATTTGAGTCTAATTGGATGGTAATAT--GAGAGTTACTAATATATCAATCATTTGGGT
--GTGGAGACCATATCTAAGATAAGAGACAGTTCTAT-------------------
>chr7A_1
CATAAATCGCATACAGAAATACAAACACGGGCGGCCGGGTGGGTGCATACGAACGTACGTAGATACATCAGGAACACTGT
TGCACCTGCCGTGGGCTTAAATGATTGGGGTCACTCACCGCCACCGGTCAGGTCGGTCTCCGTCTCTTCACTCA--CTCA
CCCGCCCGCATCATCAACAAAGCTAGCTACAGTAGCTAGCTAGCTCCCCCCAGCTCAATCCCGTCCCCTCACCCCCACAG
CAGCTTTCCCACGGCTCCCCTCCCCCCTCCT----CCCGTGCCGCGGCTATCTACCCTCCTATATACACACACCCCCGCC
CACCCCACTGTCCCTCCTCCCTCTCCTCCTCCTCCCTTCT-CACCACACCCAATCGCCCGCTCGCTCCCTCGGCTCGGCG
TCCATCGATCTCTCCTTCTACCCGAGCTGCTCCGTCGTCCGGACGGCGTCGTCGACCGCGTGCTTGCCAGGTGAGATGTC
TGGTTGATCTTCCTCGTACTGTAGCTCCGGGCCCTCCGGCGGCCAGCGGCTAGCTGCTGGTTGTGCGGCTGAGATGACCA
CGGTCCAGCGCGTGCGCGCGCGCGTGTGTGTCAGTTTCTTGGCTGATGCTGCTGTGCTGCAGCGGCCGAGCTCAG---AT
TCAGGCCGTCTTGGATGCCACGCTCTGGTCCGTCCGGGCCTGCACCGTACTCCAAGCTAGCTCAGGACCAGCTGCTGCCG
ATCCACTTCGATTCCCCCTTTAGGAAACCCTAGAGTCAGATTTTCGTGCGCCCTCGAGAAGCTTAGCATGTACAGCTACA
GACTCTCGCCGATGCTTAGCTTGATTTGTCACCTCACCATATGAGCTGAGCTGAAGAACC------------ATGCAGCG
AACTGATAAGCAGCTAGCTTACTGGCTGGCTGCTGAGTGAAAATTAAGATGCTTTTGGTTTCAGGCAGCTCCGTATG---
-----TACTAACAGGCGGCCGTCTCGCATGCAGATCTGAAGTCAAAGGAGGAGAGGACGGACATGCAGGGAGCGCCGGTG
GACAGCCCGGGGGCGGCGGAGGCGGCTGCGCGGCCGAGCCGGTACGAGTCGCAGAAGCGTCGGGACTGGCACACGTTCGG
GCAGTACCTGCGCAACCACCGCCCGCCGCTGGAGCTCTCGCGGTGCAGCGGCGCCCACGTCCTCGAGTTCCTCAGGTACC
TCGACCAGTTCGGCAAGACAAAGGTGCACGCCGCGGGCTGCCCCTTCTTCGGCCACCCTTCCCCGCCGGCGCCGTGCCCG
TGCCCGCTCCGCCAGGCCTGGGGCAGCCTGGACGCGCTCGTCGGCCGCCTGCGCGCCGCCTTCGAGGAGCACGGCGGGCG
GCCCGAGGCCAACCCGTTCGGCGCGCGCGCCGTCCGCCTCTACCTCCGCGAGGTGCGCGACTCCCAGGCGAAGGCCCGCG
GCATCGCCTACGAGAAGAAGCGCCGGAAGCGCCCGCCGCCGTCGTCGTCCCAGAAGGCGGCCAAGGCCGCCCCGTCCCCA
CCCCCACCCGCCTCTACCCATGTAGCAGCGCCCCCCCCAGAGAGCGCGCCGGAGGTCCTCGTCGCGCGGGCCGTGCCGGC
GCAGGGGCACTACTTCATCCCGCACCCGCAGCACTACATGCACGCGCATTTCCTGATGCCAGGCGGCCACGAGGCGGACG
CCGCCGTCCCGAGCAGCTCCAGCGGCAACAGCAACGGCCACAGCAATGGCCAGAGCAGCGGCACCGGCGATGAGATGGCC
ATGGCGATGGCGGCGGCAGCGGAGGCGCACGCGGCGGGGTGCATGCTGCCGCTCTCCGTGTTCAACTAGCGAGGTTTCCG
GCTGCATCCATGGATGCGATCCTAGCAAAAGCAA-CGCAAGGTAGGGCTTAAGTAAGTTAATTCGGAGGTCTATATATCT
AGCCGTAATCTTGATCGATCATCGGAACGATGGAAGGATGAGTGTCATCGA--TCGATCGATGAACGTACTATTGTTCTT
CTTACCAAACACTATTCACCCTTTTGGCTACATTTCCTGCTGGGAGCTAGTGGTGCTCCTCCTCCTTGCTACTGTAGGGT
TTCTACTTTCTAGCAGCGTTCGTGCAGGCTTGGTTGATTTGTGTATGCAGATATAATTAATCCAAGGCTCGATTGAAATG
TCAAGGGGATTTCCACTGCTAGAATGTGCACTGCTGATCGAGTGATTCATGGCAACATGCATTTAATTTGTTGCGTTCTT
CCTGTCGTCGAACAGATCTTACTGATGTGCTGCTAGGATTTTAATTTGCTCTTATGACTAGCATTGCCATGACATTTTCT
GCAGAATTTTCGTGTGGCAAATGTTTCATGCATCATCTGTATGTTTCATCTTTTT----TTT-----GCCTTGATTTCTC
ATATGCTTTCACTGTATATTTCTCTATTTATGGGCAAGAAAAT-CCTTGATTCATATGATATGATGTTGGTTGCGTGCTT
CCAATTGGTTTGCACGTTGGTGATAAAAACTATATTGAATTTATATGATGAATCTTGCATGAATTTGCATAGAAAATCCA
CACAACTACCATTGAAGTCTTTGCACATTTCTTCATTACAAGTGGGGCCTAAGATCATTTCCGATGCATCTTCTCTTAAC
ACCATATCTTAATGCATGTTAGATGTTTGGATACACCTATCAGGATGCACTGTACTCCATCCTTCCATCTATATAGGGCC
TAATGCGTTTTTCAAGACGGTGTTTGACTATTGACAAGATTAATAGTACATGAGATGCATAATGTGAAAATTATATCATT
GAAATATCCTTTCACATACGAATTTGACGACATGCTTTGTGTAAGTTGCATGTCATATATTGTTGCTCTAACATTTGGTC
AAAGTTAATCTCGAAGAACGCATTAGGCCCTATATAGATGGAAGGAGGGAGTATCTGACATAGGTTTGGTATTTTATTGT
AGGCCCTACTTTTATTAAGATTATTTGAGTCTAATTGGATGGTAATAT--GGGAGTTACTAATATATCAATCATTTGGGT
--GTGGAGACCGTATCTAAGATAAGAGACAGTTCTATATCTCTCGCCATTA-----
>SNPs
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-------------------------------------------------------------------------------S
---------------------S--------S----------S-S-------------------------S----------
-----S----S-------------S--------------------------------------------S---------S
S-----------------------------------------------------------S-----------S-------
-------------------------------------------------S------------------------------
----------S---------------------------------------------------------------------
---------------------------------------------------S------------S-------------S-
---------------------S------------------------------------------S--S------------
-S----S--S----------------------------------------------S---SSSSSSSSSSSS----S---
------------------------------------S------------------------S---------S-----SSS
SSSSS---------------------------------------------------------------------------
-----------------------S--------------------------------------------------S-----
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-------------------------S-----SS-S--------------------------------------S-----S
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---------------S----------------------------------------------------------S--S--
------------------------------------------------------------------------S--S----
------------S---------------------------------------------------S---------------
--S-----------------------------------------------------------------------------
------S-------------------------------------------------------------------------
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--------------------------------------S------------------S-S--------------------
-----S--------------------------------------------------------------------------
-------------------------------------------------------SSSS----------S----------
-----------------------S-------------------S------------------------------------
------------------S------------------------------------------S-----------------S
---S----------------------------------------------------------------------------
------------SS---------------------S-----S-------S------------------------------
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-----------------------S--------------------SS--SS--------S-------S---SSSSS-SS-S
SS-----------------------------------SSSSSSSSS-SS-SSSSSS
>forward_868
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------------------------------------------------AGCTGAAGGACCGACCAATG------------
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>reverse_3027
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------------------------------------------------------------------CCAAATTGGTTTGC
GGGTGG--------------------------------------------------
