>input_sequence_68267
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----------------------------------------------------------ATCGCACCACCACGGACGCAAG
CAAACTGCGCAAGGCACCCAGCGGAAAAGGCAGCGGAGGAGGAAGAAGAAGAGCTCGATCGATCG----CGTGCGTACGT
GGCCCGGCCGGCCGATCGAGATGTACCAGGCGATCCCCTACAGCGCGGGCCGGCTGCCGGCGTGGCCGCGGCGGTCCGAG
CAGGCCGAGGCCGACGGCGCGGCCGGCCAGGAGGGCG-------GGCTCGCCGACGCGGCGGCGAGGGGCAACGGCGGGG
AGGCGGTGAGGCGGGCGGTGGCGGAGAGCCCGGTGCTGGTGGTGGGGAGGCGCGGGTGCTGCCTCAGCCACGTGGTGAAG
CGGCTGCTGCAGGGGCTCGGGGTGAACCCCGCCGTGCACGAGGTCGCCGACGAGGCCGAGCTCGCCGCGGCGGTGACCGG
GGACGC---CGGCGAGGCCGTCGTCGCGCTGCCGGCCGTGTTCGTCGGCGGGCGGCTCCTCGGCGGGCTGGACCGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTGGTGCCCATACTCAAGGACGCCGGCGCGCTCTGGCTCTGAGCCT---ACTCCGAG
CAAAACCAAAGACGCATACGGGACGGGGTACTACGGACGTACGCACAACCGTTTGATCAGGAGTTAATCTTTTCTCCTTC
TTTTGATTTCTCC-TTTTGACTCT---TGAGATCATGTGAGTTACTGCTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACTAGTATGTACTAGCTAGCTATAGTTAGGCTTAAATTCTTTTGATTAGGGGATGAAAAAA-TTAGGAA
CTATTGT-------------------------------------------------------------------------
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-------
>chr1B_1_TraesCS1B01G425200
CTCTCGAGATTTACTTGCTGAGGGTTGATGCAGAAGTGAGAATGATATCATGACGCTATCACGATGGCTTTCCCT--AAA
AAAATACAGGAAAAATACGTCCACATTTTTCATAG-TATTTTAAAATTAAGAATATATCTCTACCACACCTCAAAAACCA
CTCTGCTGGGTATAAACAGACAGACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTT
AGGACACATCATGCGCCTCATCCCCACCCTCCACACCTGATCCCAGTCTCTCCACGGCGTCCTCGTGCGGCACGGCAGCC
GCCCCCGGCCCCACCCGCCAGTCACCAGGAGAGATCCAGCCACCCGGGCAATCGTCACCGGCCACGTCGCCCCCGGTCAC
GAGCCGGGCCCGCCGAACCACCGCGCGGTCTCCCCC-G-----CAACCGCGGCTGACGCGCCGCCACGTCACGCCGCACC
CCCGCGTCGCACCACTTTGCATGCGCACGCACACGGCCGCGCCGCGACCGGCGCGAGAAAGCCGCGGTCGCCGTCGTCCT
CTCTCCGCGTGGGCCCCGCCGCGGAGAGAAACGCTCGCCACCGCGCTG---------GTGACGGGCGGCTGACGTACGCC
GCTTCCCGCCGTGAGCTCATCGCGCTTTATATATCCGGCCTCCCAACGGCCATTGCCCATCGCACCACCACGGACGCAAG
CAAACTGCGCAAGGCACCCAGCGGAAAAGGCAGCGGAGGAGGAAGAAGAAGAGCTCGATCGATCG----CGTGCGTACGT
GGCCCGGCCGGCCGATCGAGATGTACCAGGCGATCCCCTACAGCGCGGGCCGGCTGCCGGCGTGGCCGCGGCGGTCCGAG
CAGGCCGAGGCCGACGGCGCGGCCGGCCAGGAGGGCG-------GGCTCGCCGACGCGGCGGCGAGGGGCAACGGCGGGG
AGGCGGTGAGGCGGGCGGTGGCGGAGAGCCCGGTGCTGGTGGTGGGGAGGCGCGGGTGCTGCCTCAGCCACGTGGTGAAG
CGGCTGCTGCAGGGGCTCGGGGTGAACCCCGCCGTGCACGAGGTCGCCGACGAGGCCGAGCTCGCCGCGGCGGTGACCGG
GGACGC---CGGCGAGGCCGTCGTCGCGCTGCCGGCCGTGTTCGTCGGCGGGCGGCTCCTCGGCGGGCTGGACCGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTGGTGCCCATACTCAAGGACGCCGGCGCGCTCTGGCTCTGAGCCT---ACTCCGAG
CAAAACCAAAGACGCATACGGGACGGGGTACTACGGACGTACGCACAACCGTTTGATCAGGAGTTAATCTTTTCTCCTTC
TTTTGATTTCTCC-TTTTGACTCT---TGAGATCATGTGAGTTACTGCTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACTAGTATGTACTAGCTAGCTATAGTTAGGCTTAAATTCTTTTGATTAGGGGATGAAAAAA-TTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-GACCACACGC--TTGTAAATACATGGATGAGTGAAGAGGGGTGTACTATT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCACGTCAGTTTTCTAGACGCCAATTCATTTTGTTTTTTGAAGGTTTC
T-TTAGCGGGCTTATGATGTTATCACGAAATGGCACTGTGTTGGATATTTGTAATCCATGACA-GGTGCTTGCTTGTTGC
AGCTGATTTTCCCTCTCTCTTCTTCTATGGCACTCCTTCTATTTTAAAATGTAAGATA-TTTTTTGACACTATACGTATG
GTTCACCACCACAACACTCAAGCTAAGCTGGTGCTAGCTGCAATTTAGTCGATGTCATGATGAATCTTATCAGTGCAACA
ACGACGTGTGACGTGTG----ATCATCACGAGCTAACCTCACCCACGTGGCGCCCGCAGGAAGCCAACCACCAAGTTATT
AGTATAAACAAACTAATCATGATGCATTTCTTATGAAGGTTGATTAACTCATTCCACCCTGC--AAAAAATCCCCTCTCC
TC-----CGAGTGCTCAAATTGCTATGATTTTTCACATCTGCTAGAGGCCGTTTCCGTTCTAG----GTTTATTTGGTTG
TTTGTCTGCTCATGGTCCCTTTTGTGTTGTTGGTTTGAGCCAACATACCCTCTATCCCACATGTG--ATGTGCCAGCCTT
TTCTCCTTCCTATAATTTTTGAAACAACGATGCAACGACACGG--CCAGAACACCCCGAATGAACAACACGAATACCCAA
A------------TGTCAAAATGAATTTTAGGTCGATGATGTGTCGGATCGCACATCAAATCCACAACCAAGACGATAAG
AGCTCCCTTTTTGTCAATGTAGAGAGCTCCCTTTTTGTCAATGTAGAGAGCTCCCTAGGGAGTTTAGAGCAACTCCAGCA
AAGTCGCCATGATGAGCAAATCGCTGTGATAACCATGAATGTGGTGATTCCGGCTA-AAAAACGCACTCTAGCAGAGTCG
CCATATC
>chr1D_55
------------------------------------------------------GCTATCATGATGGCTTTCCCTGGAAA
AAAATGCAGCAAAAATGCGTCCCCAATTTCATAGTATATTTTAAAATTAAGAATATATCTCTACCACACCTCAAAAACCA
CTCTGCTGGGTATAAACAGACAGACCACTCCTTTTCAAAAAAACAGATCAC-----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------TGTT
AGGACACATCATGCTCCTCATCCCCGTCCTCCACACCTGATCCTAGTTCCTCCACGGCGTCCTCGTGCGGCACGGCAGCC
ACCCACGGACCCACCGGCCAGTCACCAGGAGAGATCCAGCCACCCCGGCAATCGTCACCGGCCACGTCGCCCCCG-TCAC
GAGCCGGGCCCGCCGAACCACCGCGCGGTCTCCCCCCGCAACCCAACCGCGGCTGACGCGCCGCCACGTCACGCCGC-CC
CCCGCGTCGCACCACTTTGCATGCGCACGCACACGGCCGCGCCGCGACCGGCGCGAGAAAGCCGCGGTCGCCGTCGTCCT
CTCGCCGCGTGGGCCCCGCCGAGGAGAGAAACGCTCGCCCGCGCCAGTGACGGATGAGTGACG-----------TACGCC
GCTTCCCGCCATGAGCTCATCGCGCTTTATATATCCGGCCTCCCAACGGCCATTGCCCATCGCACCACCACGGACGCAAG
CAAACTGCGCAACGCACCCAGCGGAAAAGGTAGCGGAGGAGGAAGAAGAAGAGC----TCGATCG----TGTGCGTACGT
CGCCCGGCCGTCCGATCGAGATGTACCAGGCGATCCCCTACAGCGCGGGCCGGCTGCCGGCGTGGCCGCGGCGGTCCGAG
CAGGCCGAGGCCGACGGCGCGGCCGGCCAGGAGGGCG-------GGCTCGCCGACGCGGCGGCGAGGGGCGACGGCGGGG
AGGCGGTGAGGCGGGCGGTGGCGGAGAGCCCGGTGCTGGTGGTGGGGAGGCGCGGGTGCTGCCTCAGCCACGTGGTGAAG
CGGCTGCTGCAGGGGCTCGGGGTGAACCCCGCCGTGCACGAGGTCGCCGACGAGGCCGAGCTCGCCGCGGTGGTGACCGG
GGACGCGGGCGGCGAGGCCGTCGTCGCGCTGCCGGCGGTGTTCGTGGGCGGGCGGCTCCTCGGCGGGCTCGACCGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTGGTGCCCATACTCAAGGACGCCGGCGCGCTCTGGCTCTGAGCCT---ACTCTGAG
CAAAATCAAAGATGCATGCCGGACGGGGTACTACGGACGTACGCACAACCGTTTGATCAGGAGTTAATCTTTTCTCCTTC
TTTTGATTTCTCC-TTTTGACTCT---TGAGATCATGTGAGTTACTGCTGCTCGATCTCCAGTCTCTCTTGATTGGGATC
AATAATGAAGTACTACCACTAGCTAGCTATATATAGTTAGGCTTAAATTCTTTTGATTAGGGG-TGGAAAAA-ATAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-GACCACACGC--TTGTAAATACATGGATGAGTGAAGAGGGGTGTACTATT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCACATCAGTTTTCTAGATGCCAATTCATTTTGTCTTT-GAAGGTTTC
TTCTAGCGGGCTTATGATGTTATCATGAAATGGCACTGTGTTGGATATTTGTAATCCATGGCA-GGTGGTTGTTTGTTGC
AGCTGA-TTTCCCCCTTTCTTCTTCTATAGTACTCCTTCTATTTCAAAATGTAAGATA-TTTTTTGACACTATACGTATG
GTTCGCCACCGGAACACTCAAGCTAAGCCGGTGCTAGCTGCAATTTAGTCGATGTCATGATGAATCTTATCAGTGCAACA
ACGACATGTGACGTGTGATTTATCATCACGAGCTAACCTCACCCACGTGGCGCTCGCAGGAAGCCAACCACCAAGTTATT
AGTA--AACAAACTAATCATGATACATTCCTTATGAAGGTTGATTCATTCATTTCAACCCTGCAAAAAAATCCCCTCTCC
TT-----GGAGTGCTCAAATTGCTATGATATTTCACATCTGCTAGAAGCCGTTTCCATTGTAGTAGGGTTTATTTGGTTG
TTTATTTGCTCATGGTTTCTTTTGTGTTGTTGGTTTGAGCCAACGTACCCTCTACCCCACATGTGCCATCCT------TT
TTCTCCTTCCTATAATATGTGAAACAACGATGCAACGACACACAACCAGAACAACCCTAATGAACAACACGAATACCCAA
GGTGTATGCTTACTGTCAAAGGGAATGCTAAGTCGATGATGTGTCGGGTCCCACATCAAATCCACAACCAAGACGATAAG
CGCTCCCTTTT------------------------TGTCAATGTAGAGAGCTCCCCAAGGAGTTTAGAGCAACTTCAACA
AAGTCGCCACGATGGGCAAATCTCTATGATAACCATGAATGTGGTGATTCCGGCTA-AAAAACGCACTCTAGTAGAGTCA
CCATATC
>chr1A_554
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------TGTT
AGGACACATCATGCTCCTCATCCCCATCCTCCACACCTGATCCCAGTTCCTCCACGGCGTCCTCGTGCGGCACGGCAGCC
GCCCCCGGTCCCACCCGCCAGTCACCAGGAAAGGTCCAGCCACCCCGGCAATCGTCACCGGCCACGTCGCCCCCG-TCAC
GAGCGGGGCTCGCCGAACCACCGCGCGGTCTCACCCCG-----CAACCGCGGCTGACGCGCCGCCACGTCACGCCGC-CC
CCCGCGTCGCACCACTTTGCATGCACGCGCACACGGCCGCGCCGCGACCGGCGCGAGAAAGCCGCGGTCGCCGTCGTCCT
CTCGCCGCGTGGGCCCCGCCGGGGAGAGAAACGCTCGCCACCGCGCCG---------GTGACG-----------TACCCC
ACTTCCCGCCATGAGCTCATCGCGCTTTATATATCCGGCCTCCCAACGGCCATTGCCCATCACACCACCACGGACGCAAG
CAAGCTGCGCAAGGCACCCAGCGGAAAAGGCAGCGGAGGAGGAAGAAGAAGAGC----TCCATCGATCACGTGCGTGCGT
GGCCCGGCCGTCCGATCGAGATGTACCAGGCAATCCCCTACAGCGCGGGGCGGCTGCCGGCGTGGCCGCGGCGGTCCGAG
CAGGCCGAGGCCGACGGCGCGGCCGGCCAGGAGGGCG-------CGCTCGCCGACGCGGCGGCGAGGGGCGACGGCGGGG
AGGCGGTGAGGCGGGCGGTGGCGGAGAGCCCCGTGCTGGTGGTGGGGAGGCGCGGGTGCTGCCTCAGCCACGTGGTGAAG
CGGCTGCTGCAGGGGCTCGGGGTGAACCCCGCCGTCCACGAGGTCGCCGACGAGGCCGAGCTCGCCGCGGCGGTGGCCGG
GGACGCCGGCGGCGAGGCCGTCGTCGCGCTGCCGGCGGTGTTCGTGGGCGGGAGGCTCCTCGGCGGCCTCGACCGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTCGTGCCCATACTCAAGGACGCCGGCGCGCTCTGGCTCTGATCCTC---CTCTGAG
CAAAATCAAAGATGCATACGGGAGGTGGTACTACGGACGTACGCACAGCCGTTTGATCAGGAGTTAATCTTTTCTCC-TC
TTTTGATTTCTCC-TTTTGACTCT---TGAGATCATGTGAGTTACTGCTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACTAGTATGTACTAGCTAGCTATAGTTAGGCTTAAATTCTTTTGATTAGGGGAT-GAAAAG-TTAGGAA
TTATCGTGTCATCTCGTGCTTATTTTTTC-GACCACACGC--TTGTAAGTACATGGATGAGTGAAGAGGAGTGTACTATT
TAGCACTGTATAAATCATGGTCCTTTCATCATGCACATCGGTTTTCTAGATGCCAATTCATTTTGATTTT-GAAGGTTTC
TCTTAGCGGGCTTATGATGTTATCATGAAATGGCACTGTGTTGGATATTTGTAATCCATGGCA-GGTGGTTGTTTGTTGC
AGCCGATTTTCCCGG-CTCTTGTTCTATAGTACTCCTTCTATTTCAAAATGTAAGACTTTTTTTTAATGCTACACGTACG
GTTCACCACCACAACACTCAAGCTAAGCTGGTGCTAGCTGCAATTTAGTCGATGTCATGATGAATCTTATCAGTGCAACA
ACGACGTGTGACGTGTGATTTATCATCACGAGCTAACCTCACCCACGTGGCGCCCGCAGGAAGCCAACCAG---------
--------CAAACTAATCATGATACATTTCTTATGAAGGTTTATTAATTCATTTCCACCCAGCAAAAAAATCCCCTCTCC
TCTCCTCGGAGTGCTCAAATTGCCATGATTTTTCACATCTGCTAGAAGCCGTTTCCATTGTAG---GGTTCATTTGGTTA
TTTATTTGCTCATGGTCCCTTTTGTGTTGTTGGTTTGAGCCAACAAACCCTCTATCCCACATGTGCGATGTGCCAGCCGT
TTCTCCTTTCTATAATTTGTGAAACAACGATGCGACGACACACGATCAAAACACCCCGAATGAACAACACGAATACCCAA
A------------TGTCAAAATGAATGTTAGGTCGATGATGTGTGGGATCCCACATCAAATCCACAACCAAGACAATAAG
AGCTCCCTTTT------------------------TGTCAACGTAGACAGCTCCCTAGGGAGTTTAGAGCAACTCCAGCA
AAGTCGCCATGATGGGCAAATCGCTATGATAATCATGAATGCGGTGATTCCGGCTACAAAAACACACTCTAGCAGAGGCG
CCATATC
>chr7B_1063
GGAAAAG-------------------------------------------------------------------------
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----------------------------------------------AGAAGAGC----TCGATCA----CGT-CGTACGT
TGCT----CGGCCGATCGAGATGTACTAGGCGATCCCCTACAGCGTCGGCCGGCTGCTGGCGTGCCCGCGGCGGTCCGAG
CAGGCCGAGGCCGAGGGCGCGGCCGGCCAGGAGGGAGGGCTCGCGGCTCGCCGACGCGGCGGTGAAGGGCGACGGCGGGG
AGGCGGTGAGGAGGGCGGTGGCAGAGATCCTGGTGCTGGTGGTGGGGAGGCGCGGGTGCTGCCTCAGCCACGTGGTGAAG
CGGCTGCTGCAGGGGCTCGGGGTGAACCCCTCTGTGCACGAGGTCGCCGACGAGGCCGAGCTCGCTGCGGCGGTGGCCGG
GAACGCTGGAGGCGAGGCCGGCGTCGCGCTGCCGGCGGTGTTCGTCGGTGTGAGGCTCCTCGGCGGGCTCGATCGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTCGTGCCCATACTCAAGGACGCCTGCGCGCTCTGGCTCTGAGTCTCTGACTCTGAG
CAAAACCAAAGATGCATACGGGACAGGGTACTACGGACGTACGAACAACCATTTGATCATGAGTTAATCTT--------C
TTTTCATTTCTC--------CTCTTGATGAGATCATGTGAGTTACTGCTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGACTATCAGCT---------TAGCTATAGTTAGGCCTAAATTCTTTTGATTAGGGT-AGGAAAAA-TTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-GACCACACGC--TTGTAAATATATGGATGAGTGAAGAGGGGTGTACTATT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCACATCAGTTTTCTAGATGCCAATTCATTATGTCTTT-GAAGGTTTC
TTCTAGCAGGCTTCTGATGTTATCACGAAATGGCACTGTGTTGGATATTTGTAATCCATGACGGGGTGCTTGTTTGTAGC
AGCTGATTTTCCCTCTCTCTTCTTCTATAGTACTCCT-------------------------------------------
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>chr4A_1063
GGAAAAG-------------------------------------------------------------------------
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----------------------------------------------AGAAGAGC----TCGATCA----CGT-CGTACGT
CGCT----CGGCGGATCGAGATGTACCAGGCGATCCCCTACAGCGCTGGCCGGCTGCTGGCGTGCCTGCAACAGTCCTAG
CAGGCCGAGGCCGAGGGCGTGGCCGGCCAGGAGGGCGAGCTCGCGGCTCGCCGACACGGCGGCGAGGGGCGACGGCGGGG
AGGTAGTGAGGAGGGCGGTGGCAGAGAGCCTGGTGCTGGTGGTGGGGAGGCGCGGGTGCTACCTTAGCCACGTGGTGAAG
CAGCTGTTGCAGGGGCTCGGGGTGAACCCCGCCATGCACGAGGTCACCGAGGAGGCCGAGCTCGCTGCAGCGGTGGCCAG
GAACGCTGGAGGCGAGGCCATCGTTGCGCTGCTGGCGGTGTTCGTTGGTGGGAGGAACCTCGGCGGGCTCGATCGGCTCA
TGGTCGTGCACATCTCCGGCGAGCTCGTGCCCATACTCAAGGACGCCGGCACGCTCTGGCTCTGAGTCTCTGACTCTGAG
CAAAACCAAAGATGCATTCGGGACGGGGTACTATGGACGTACGAACAACCGTTTGATCATGAGTTAAACTT--------C
TTTTCAATTCTCT-TTTTGACGCTTGATGAGATTATGTGAGTTACTACTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACCAGCT---------TAGCTATAGTTAGGCCTAAATTCTTTTGATTAGGGT-AGGAAAAA-TTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-GACCACACGC--TTGTAAATACATGGATGAGTGAAGAGGGGTGTACTATT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCACATTAGTTTTCTAGATGCCAATTCATTTTGTCTTT-GAAGGTTTC
TTCTAGCAGGCTTATGATGTTATCACGAAATGGCACTATGTTGGATATTTGTAATCCATGAAGGGGTGCTTGTTTGTTGC
ACCTGA-TTTCCCTCTCTCTTCTTCTATAGTACTCCT-------------------------------------------
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-------
>chr5A_1063
GGAAAAG-------------------------------------------------------------------------
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----------------------------------------------AGAAGAGC----TCGATCA----CGT-CGTACGT
CGCT----CGGCCGATCGAGATGTACCAGGCGATCCCCTACAGCGCCGGCCGGCTGCCAGCGTGCCTACAGCAGTCCGAG
CAGGCCGAGGCCGAGGGCGCGACCGGCCAGGAGGGCGGGCTCGCGGCTCGCCGACACGGCGGCGAGGGGCGACGGCGGGG
AGGTGGTGAGGAGGGCGGTGGCAGAGAGCCTGGTGCTGGTGGTGGGGAGGCGCGGGTGCTACCTCAGCCACGTGGTGAAG
CGGCTATTGCAGGGGCTCGGGGTGAACCCCGCCGTGCACGAGGTCGCCGACGAGGCCGAGCTCGCTGCAGCGGTGGCCGG
GAACGCTGGAGGCGAGGCCGTCGTCGCGCTGCTGGCGGTGTTCGTCGGTGGGAGGAACCTCGGCGGGCTCGATCGGCTCA
TGGTCGTGCACATCTCCGGTGATCTCGTGCCCGTACTCAAGGACGCCGGCGCGCTCTGGCTCTGAGTCTCTGACTCTGAG
CAAAACCAAAGATGCATACGGGACGGGGTAGTACGGACGTACGAACAACCGTTTGATCATGAGTTAAACTT--------C
TTTTCAATTCTCT-TTTTGACTCTTGATGAGATTATGTGAGTTACTACTGCTCGATCTTCAG-----------TGGGATC
AATAATGGAGTACCAGCT---------TAGCTATAGTTAGGCCTAAATTCTTTTGATTAGGGT-AGGAAAAA-TTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-GACCACACGC--TTGTAAATACATGGATGAGTGAAGAGGGGTGTACTTTT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCACATTAGTTTTCTAGATGCCAATTCATTTTGTCTTT-GAAGGTTTC
TTCTAGCAGGCTTATGATGTTATCACGAAATGGCACTATGTTGGATATTTGTAATCCATGAAGGGGTGCTTGTTTGTTGC
AGCTGA-TTTCCCTCTCTCTTCTTCTATAGTACTCCT-------------------------------------------
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-------
>chr6D_1107
--------------------------------------------------------------------------------
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--------CGGCCGATCGAGATGTACCAGACGATCTCCTACAGTGCCGGCCGGCTGCCGGTGTGCCCGTGGCGGTCCGAG
CAGGCCGAGGCCGAGGGCGCGGTCGGCCAGGAGGGCGGGCTCGCGGCTCGCCGATGCGGCGGCAAGGGGCGACGGCAGGG
AGGCGGTGAGGACGGCGTTGGCAGAGAGCCCGGTGCTGGTGGTGGGGAGGCGCGGGTGCTGCCTCAGCCATTTGGTGAAG
CGGCTGCTGCAGGGGCTCGGAGTGAACCCCGCCGTGCACGAGGTCGCCGATGAGGCCGAGCTCGCCGCGGCGGTGGCCGG
GAACACTGGAGGCGAGGTCGTCGTCGCGCTGCCGGCGGTGTTCATCGGTGGGAGGCTCCTCGGCGGGCTCGACCGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTCATGCCCATACTCAAGGACGCCGGCGCGCTCTGGCTCTGAGTCTCTGATTCTGAG
CAAAACCAAAGATGTATACGGGACGGGGTACTACGGACGTACGCACAACCGTTTGATCATGAGTTAATCTT--------C
TTTTCATTTCTCC-TTTTGACTCTTGATGAGATCATGTGAGTTACTGCTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACCAGCT---------TAGCTATAGTTAGGCTTAAGTTCTTTTGATTAGGGT-AGGAAAAA-TTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTT-GACCACACGC--TTGTAAATACATGGATGAGTGAAGAGGGGTGTACCATT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCACATCAGTTTTCTAGATGCCAATTCATTTTGTCTTT-GAAGGTTTC
TTCTAGCGGGCTTATGATGTTATCACGAAATGGCACTGTGTTGGATATTTGTAATCCATGACGGGGTGCTTGTTTGTTGC
AGCTGATTTTCCCTCTCTCTTCTTCTATAGTACTCCT-------------------------------------------
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>chr3B_1107
CGA-----------------------------------------------------------------------------
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-----------CCGATCAAGATGTACCAGGCGATCCCCTACGGCGTCGGCCGGCTGCC-GCGTGCCCGCGGCGGTCCGAG
CAGGCCGAGGCCGAGAGCGCGGCCAGCCAGGAGGGCGGGCTCGCGGCTCGCCGGCGCGGCGGCAAGGGGCGACGGCGGGG
AGGCGGTGAGGAGGGCGGTGGCAGAGAGCCTGGTGCTAGTGGTGGGGAGGCGCGGGTGCTGCCTCAGCCACGTGGTGAAG
CGGCTGCTGTAGGGGCTTGGGGTGAACCCTGCCGTGCACGAGGTCGCCGACGAGGACGAGCTCACCGCGGCGGTGGCCGG
GAACGCTGGAGGCGAGGCTGTCATCACGCTGCCGGCGGTGTTCGTCGGTGGGAGGCTCCTCGGCGGGCTCGATCGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTCGTGCCCATACTCAAGGACGCCGGCGCGCTCTGGCTCTGAGTCTCTGACTCTGAG
AAAAACCAAAGATGCATATGGGACGGGATACTACGGACGTACGAACAACCATTTGATCATGAGTTAATCTT--------C
TTTTCATTTCTCC-TTT-GATTCTTGATGAGATCATGTGAGTTACTGCTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACCAGCT---------TAGCTATAGTTAGGCTTAAATTCTTTTGATTAGGGT-AGGAAAAA-TTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-GACCAAACGC-TTTGTAAATACATGTATGAGTGAAGAGGGGTGTACTATT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCTCATCAGTTTTCTAGATGCCAATTCATTTTGTCTTT-GAAGGTTTC
TTCTAGCAGGCTTATGATGTTATCACGAAATGACACTGTGTTGGATATTTGTAATCCATGACGGGGTGCTTGTTTGTTGC
AGCTGATTTTCCCTCTCTCTTCTTCTATAGTACTCCT-------------------------------------------
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>chr3B_1107
--------------------------------------------------------------------------------
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--------CGGCCGATTGAGATGTACCAGGCGATCCCCTACAGCGTCGGCCGGCTGCCGGCGTGCCCGCGGCGGTCCGAG
CAGGCCGAGGCTAAGGGCGCGGCCGGCCAGGAGGGCGGGCTCGCGGCTTGCCGACGCAGCGGCGAGGGGCGACGGCGGGG
ATGCGGTGAGGAGGTCGATGGCAGAGAGCCTGGTGCTAGTTGTGGGGAGGCGCGGGTGCTGCCTCAGCCATGTGGTGAAG
CGGCTGCTGTAGGGGCTCGGGGTGAACCCCGCCATGCACGAGGTCGCTGACGACGACGAGCTCACCGCGGCGGTTGCCGG
GAACGCTGGAGGCGAGGCCGTTGTCGCGCTGCCGGCGGTGTTTGTCGGTGGGAGGCTCCTCGGCGGGCTCGATCGGCTCA
TGGTCGTGCACATCTTCGGCGAGCTCGTGCCCATACTCAAGGACACCGGCGCGCTCTGTCTCTGAGTCTCTGACTCTGAG
CAAAACCAAAGATGCATATGGGACGGGGTACTACGGACGTACGAACAACCGTTTGTTCATGAGTTAATCTT--------C
TTTTCATTTCTCCTTTT-GATTCTTGATGAGATCATGTGAGTTACTGCTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACCAGCT---------TAGCTATAGTTAGGCTTAAATTCTTTTGATTAGGGT-AGGAAAAA-TTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-GACCAAACGCTTTTGTAAATACATGTATGAGTGAAGAGGGGTGTACTATT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCTCATCAGTTTTCTAGATGCCAATTCATTTTGTCTTT-GAAGGTTTC
TTCTAGCAGGCTTATGATGTTATGACGAAATGGCACTCTGTTGGATATTTGTAATCCATGACGGGGTGCTTGTTTGTTGC
AGCTGATTTTCCCTCTCTCTTCTTCTATAGTACTCCT-------------------------------------------
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>chr6B_1107
--------------------------------------------------------------------------------
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--------CGGCCGATTGAGATGTACCAGGCGATCCCCTACAGCGTCGGCCGGCTGCCGGCGTGCCCGCGGCGGTCCGAG
CAGGCCGAGGCCGAGGGCGCGGTCGGCCAGGAGGGCGGGCTCGCGGCTCGCCGACGCGGCGGTGAGGGGCGACGGCGGGG
AGGCGGTGAGGAGGGCCGTGGCAGAGAGCCTGGTGCTAGTGGTGGGGAGGCGCGGGTGCTGCCTCAGCCACGTGGTGAAG
CGGCTGCTGTAGGGG-TCGGGGTGAACCCCGCCATGCAAGAGGTCACCGACGACGACGAGCTCACCACGGCGGGGGCCGG
GAACGCTGGAGGCGAGGCTGTCGTCGCGCTGCCGGCGGTGTTCGTCGGTGGGAGGCTCCTCGGCGGGCTCGATCGGCTCA
TGGCCGTGCACATCTTCGGCGAGCTCGTGCCCATACTCAAGGACGCGGGCGCGCTCTGGCTCTGAGTCTCTGACTCTGAG
CAAAACCAAAGATGCATACGGGACGGGGTACTACGGACGTACGAACAACCGTTTGTTCATGAGTTAATCTT--------C
TTTTCATTTCTCCTGTT-GATTCTTGATGAGATCATGTGAGTTACTGCTTCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACCAGCT---------TAGCTATAGTTAGGCTTAAATTCTTTTGATTAGGGT-AGGAAAAA-TTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-GACCAAACGC-TTTGTAAATACATGTATGAGTGAAGAGGGGTGTACTATT
TAGCACTGTATAAATCATGTTCCTTCCATCTTGCTCATCGGTTTTCTAGATGCCAATTCATTTTGTCTTT-GAAGGTTTC
TTCTAGCAGGCTTATGATGTTATCACGAAATGGCACCGTGTTGGATATTTGTAATCCATGATGGGGTGCTTGTTTGTTGT
AGCTGATTTTCCCTCTCTCTTCTTCTATAGTACTCCT-------------------------------------------
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>chr2A_1107
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--------CGGCCGATCGAGATGTACCAGGCGATCCCCTACAGTGCCGGCCAGCTGTCGGCGTGCCTGCAGCAGTCCGAG
CAGGCCGAGGCCGAGGGCGCGGCCGGCCAGGAGGGCGGGCTCGCGGCTCGCCGACACGGCGGCGAGGGGCGACGGCGGGG
AGGTGGTGAGGAGGGCGGTGGCAGAGAGCCTGGTGCTGGTGGTGGGGAGGTGCGGGTGCTACCTTAGCCACGTGGTGAAG
CGGCTGTTGCAGGGGCTCGGGGTGAACCCCGCCGTGCACGAGGTCACCGACGAGGCCGAGCTCACTGCAGCGGTGGCCAG
GAACGCTGGAGGCGAGGCCGTCGTCGCGCTGCTGGCGGCGTTCGTCGGTGGGAGGAACCTCGGCGGGCTCGATCGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTCGTGCCCATACTCAAGGACGCCGGCACGCTCTAGCTCTGAGTCTCTGACTCTGAG
CAAAACCAAAGATGCATATGGGACGGGGTACTACGGACGTACGAACAACCATTTGATCATGAGTTAAACTT--------C
TTTTCAATTCTCTTTTT-GACTCTTGATGAGATTATGTGAGTTACTACTGCTCGATCTTCAGTATCTCTTGATTGGGATC
AATAATGGAGTACCAGCT---------TAGCTATAGTTAGGCCTAAATTCTTTTGATTAGGGT-AGGAAAAA-TTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-GACCACACGC--TTGTAAATACATGGATGAGTGAAGAGGGGTGTACTATT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCACATTAGTTTTCTAGATGCCAATTCATTTTGTCTTT-GAAGGTTTC
TTCTAGTAGGCTTATGATGTTATCACGAAATGGCACTATGTTGGATATTTGTAATCCATGAAGGGGTGCTTGTTTGTTGC
AGCTGA-TTTCCCTCTCTCTTCTTCTATAGTACTCCT-------------------------------------------
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>chr5B_1108
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---------GGCCGATCGAGATGTACCAGGCGATCCCCTACAGCGCCGGCCGGCTGCCGGTGTGCCTGCGGCGGTCCGAG
CAGGCCGAGGCCGAGGGCGCGGCCGGTCAGGAGGATGGGCTCGCGGCTCGCCGACGCGGCGGCAAGGGGCCACAGCGGGG
AGGCGGTGAGGAGGGCGGTGGCAGAGAGCCTGGTGCTAGTGGTGGGGAGGCGCATGTGCTGCCTCAGTCACGTGGTGAAG
CGGCTGCTGTAGGGGCTCGGGCTAAACCCCGCCGTGCACGAGGTTGCCGACAAGGACGAGCTCACCGCGGCGGTGGCCGG
GAACGCTGGAGGCGAGGCCGTCGTCGCGCTGCCGACGGTGTTCGTCGGTGGGAGGCTCCTCGGCGGGCTCGATCGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTCGTGCCCATACTCAAGGACGCCGGCGCGCTCTGGCTCTAAGTCTCTGACTCTGAG
CAAAACCAAAGATGCATACGGGACGGGGTACTATGGACGTACAAACAACCGTTTGATCATGAGTTAATCTT--------C
TTTTCATTTCTCCTTTT-GATTGTTGATGAGATCATGTGAGTTACTGCTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACCAGCT---------TAGCTATAGTTAGGCTTAAATTCTTTTGATTAGGGT-AGGAAAAAATTAGGAA
CTATTGTTCCATCTCGTGCTTATT--TTTCGACCAAATGC--TTGTAAATACATGTATGAGTGAAGAGGGGTGTACTATT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCTCATCAGTTTTCTAGATGCCAATTCATTTTGTCTTT-GAAGGTTTC
TTCTAGCAGGCTTATGATGTTATCATGAAATGGCACTGTGTTGGATATTTGTAATCCATGACGGGGTGCTTGTTTGTTGC
AGCTGATTTTCCCTCTCTCTTCTTCTAT----------------------------------------------------
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>chr6A_1385
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-----------------------------------------------------GGCCGAGCTCGCCGCGGCGGTGGCCGG
GAACGCTGGAGGCAAGGCTGTCGTCGCGCTGCCGGCGGTCTTCGTCGGTGGGAGGATCCTCGGTGGGCTCGATTGGCTCA
TGGCCGTGCACATCTCCGGCGAGCTCGTGCCCATACTCAAGGACGCCGGCGCGCTCTGGCTCTGAGTCTCTGGCTCTGAG
CAAAACCAAAGATGCATACGGGACGGGGTACTACGGACGTACGAACAACCGTTTGATCATGAGTTAATATT--------C
TTTTCATTTCTACTTTT-GACTCTTGATGAGATCATGTGAGTTACTGCTGCTCGATCTTCAGTCTCTCTTGATTGGGATC
AATAATGGAGTACCATCT---------TAGCTATAGTTAGGCTTAAATTCTTTTGATTAGGGT-AGG-AAAAATTAGGAA
CTATTGTGCCATCTCGTGCTTATT--TTC-AACCACACGC--TTGTCAGTACATGCATGAGTGAAGAGGGGTGTACTACT
TAGCACTGTATAAATCATGTTCCTTTCATCTTGCACATCAGTTTTCTAGATGCCAATTCATTTTGTATTT-GAAGGTTTC
TTCTAGCAGGCTTATGATGTTATCACGAAATGGCACTGTGTTGGATATTTGTAATCCATGACGGGGTGCTTGTTTGTTGC
AGCTAATTTTACCTCTCTCTTCTTCTATAGTACTCCT-------------------------------------------
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>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S------------------
-----S---S------S-----S--S---SSSSSS---------------------------------------------
---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
--------------S-----------S--------------------SS-------------------------------
--------S------------------------------------S-----------------------------S----
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
---S-----------------S------------------------S----------------SSSSSSSSSSS------
----------S---------------------------------------------------------------------
------------------------------------------------------SSSS----------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S--------------------------------S----------
----------------------------------------------------------------------------S---
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
------------------------------------S-------------S-------------------S---------
------------------------------------------------------------------------S-------
----------------------------S-S-------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----SS-----------------S-----------------------S-----S--S--SSS------------------
-------S--------------------------------------S---------S--S--------------------
---S-S--------------------------------------------------------------------------
------------------S----------------------SS-------------------------------------
--------------------------S-----------------------S-----------------------------
-----------SSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------
--------------S----------S------------------------------------------------------
-------
>forward_32
------------ACTTGCTGAGGGTTGATGCA------------------------------------------------
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>reverse_1597
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----------------------------------------------------------------------------CGAG
CAAAACCAAAGACGCA----------------------------------------------------------------
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>forward_609
--------------------------------------------------------------------------------
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-----------------------------TCCACACCTGATCCCAGTCT-------------------------------
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>reverse_2603
--------------------------------------------------------------------------------
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------------------------------------------GCCAGAACACCCCGAATGAA------------------
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-------
