>input_sequence_68239
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----------------------------------------CGAGAGTCCGCCGCGCCCACCCGCCAGCCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGGAAGCAGCTGGCGACCAAGGCGGCG----------
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----------------------CGCAAGTCGGCCCCGGCCACCGGCGGCGTGAAGAAGCCGCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGCCTGGTG
CGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTGTCCGCGCTCCAGGAGGCCGCCGAGGC
CTACCTCGTGGGGCTGTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGGTTGCCTCGTGGTT-------------------------------
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-----------------------------------------------------------------------------GTC
TGATCTGGAGACTGGTGTAGAGATGTTAGCTTCGTCTCGTTAGCATGTGTC-----------TGATCTTGCATCGTGGTA
GGAAGATCCCTC--GTTCGTGCCAGTATGGCTGTGTTATGTTCTAGTGTGTACTGTCTGATGTTACCCTCTTGTTGCCAT
CAGCAA--TGTGAAAGTTGGCTCGCAGATCTTAACTTTGTGCTTCGTGATGCGCTTTGCTGTTTCCGGGCCTCAGATCTT
AATTTCATGCTTCGTGATTCAAACCTGAAATATCAACGAATGGGGTTTCTTAGCTTTATCCATGGCGTTGATTGGAATTT
CCTGGATTTTAA--GCCTGAAGCCCCAATG--------------------------------------------------
------AAGTGGCGCTTTGTTC----------------------------------------------------------
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--------------------------------
>chr4A_1_TraesCS4A01G030300
GATCCGTCCAAGACCATTGTGGGGTTGCCGAGCTCATCCAAGCTGGGATGGTCGAGTTTGAGCGCACGGTCCGTCAATAA
GTTGGTGAGAGGTGATGCAAGGTGGAGGAAGAAACGCGTCTGCACCGCGAGCGCGACACCGCGACCGATGAGGGACGCCA
TGACACCATCCTCAAGCGGTGTGGCGGCGACGATGACGGCTCAGACAAAGCCGACTACGACGACATGGACGATGATGGCG
GTGTGAGGTCATCGTTTGCTACTTGGCCTAGTAATTTAGATGACGATACCGTTGACCCCTCGGTCACCGTCCACTGGTCT
TATCTACGCAGTCATCGTTTTTTTTTTTTGCAAAAGCAGTCATCGGCTTGACTGGGAAATTAAGGTCACGTAAGCAAGAA
AAACATATAGAAATGTATCAGAAACTTATACAGTGACTATGTACAATACCGAGAGCATGTGTAGTGACCGTATTTAAAGT
ATAGTGAAATCCAATGACCAAAGTCAAACGCCGACTCAAGTTCAAGTATACTATGGATAAATTTTGCTCCTATCGCAAAC
CACAAGAACACAGTCTGAATTCTGGCGTAAAACTGGAAAAGAGAGAAATGGTGCGTCACATATCCCAGCTTCCGCCCGTG
CTCCATCACACCACTCATCAGAGAACCGAAGAACACCTAAAAAAAAGAGAACCAAAGAGGGGTCTACGCAGC-------C
CACAGTTCCACCACGCCCGAG---------------------------CCAATCAGAATCGAGAAACCAGCGCGCCACGG
ATCGCTCCCCCACGATCCGCGTGACTCATCTGAAACTAAATCCTCACCACCCATTTCCCGCAGATCCAACGCTCGGAACT
CCT--CCCCCCTCCCAAAGCAC------------------------ACCGCGCCCAGAAACGCGAAATTTTCCCCAGACT
CGCGCCCACCGG-CCGCCTCC---CGCTCCTTAAAACCACCGGATCCCCTC-CCCGTCTTCCTCATCCTCATCCC-----
----------AGCCCCCAAGCAGTTCCCCTCCTCAACCCCCGAGAGTCCGCCGCGCCCACCCGCCAGCCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGGAAGCAGCTGGCGACCAAGGCGGCG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGCAAGTCGGCCCCGGCCACCGGCGGCGTGAAGAAGCCGCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGCCTGGTG
CGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTGTCCGCGCTCCAGGAGGCCGCCGAGGC
CTACCTCGTGGGGCTGTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGGTTGCCTCGTGGTT-------------------------------
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-----------------------------------------------------------------------------GTC
TGATCTGGAGACTGGTGTAGAGATGTTAGCTTCGTCTCGTTAGCATGTGTC-----------TGATCTTGCATCGTGGTA
GGAAGATCCCTC--GTTCGTGCCAGTATGGCTGTGTTATGTTCTAGTGTGTACTGTCTGATGTTACCCTCTTGTTGCCAT
CAGCAA--TGTGAAAGTTGGCTCGCAGATCTTAACTTTGTGCTTCGTGATGCGCTTTGCTGTTTCCGGGCCTCAGATCTT
AATTTCATGCTTCGTGATTCAAACCTGAAATATCAACGAATGGGGTTTCTTAGCTTTATCCATGGCGTTGATTGGAATTT
CCTGGATTTTAA--GCCTGAAGCCCCAATG--------------------------------------------------
------AAGTGGCGCTTTGTTCCTCCAGTTTTCAGTTTGTTCCCTCTCATGTTTAGTACGCTT--------TGGAATGAA
TCTTGTATACTTTGAACGCTAGTGCACCGATCTAAATGATTTGATCTTGTTACTGAAACATC------------------
-----------------------------TGAATTGTCTGAAATCTGTCCCAGG--TTAGTGCACTGTTAG---------
------------------------------------TTTTTTTTGTTGAAGTTGAGTAC---------------------
----TGTTAGTTTGAACCATTGCATTTGCTGTATCTACCACAATCATTCAATGCATTGATGGCTTAGTGCCTTGGTCAGT
AGCTGTACTGGGCAGCTTCTT---ATTGATATTACTTGCTTGTTGCATTTCTACTGAGATCATCTTTAACCTATGAGTGA
CATGGCAACTTGGCAAAGCAAGGCCTGCCAATTTGTATGCTTATGTCATCTAATCTTTGGAAGTCCCTATTTCCCTCTCC
TGAACTAGCAAAAGTAAGATTACGGCTTCATTTTCTTGACTATAAAGCAGTGTGATTGACATATTTTTAACCACTTCTGA
AGCTAGTCTTACGACAGTATTATGCGTTGACTAAACTAATAGCCATTCAAATCAGCCCTCTATACAAGTCTTTCCAAACC
TATATATTTGTGTCATTTCAGAACCAAACCTATACTAAAGTGATGATGCCATTTTCCTATTTTTTAGCAAGCATTTTCCT
ATTTAACAGTACATAGCAGCTGTTGCATCATGTATGGCTGACGAACCAGGCGTCAAGCCCACACCTGGTAAGCTATCTCA
AAAAAAAAAAAGTATGGCTGACGAGCGATGGTTACTACTCCCTCCGTTTCTAAATATTTGTCTTTTTAGAGATCTCAAAT
GGTTACCACATACGAATGTATATAGACATATTTTAGAGTATAGATTCACTCATTGTGCTCTGTATGTAGTCACTTGTTGA
AATCTCTAGAAAGACAAATATTTAGGAACGGAGGGAGTAGCAAAGATCAGCTCAACTGCCGCCGTTCTGCTTCTCATTGC
TCCAAGGTTTTCTGTTTTTGTTCTCTCATCTC
>chr4B_452
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---------------------------------------------------AGAGCATGTATAGTGACCGAATTTAAAGT
ATATTTAAGTCCAGTGACCAAAGTCAAATGCCGACTCAAGTTCAAGTATACTATGGATAAATTCTGCTCCTATTGCA-AC
CACAGGAACGCAGTCTGAATTCTGGCGTAAAAATGGAAAAGGGAGAAATGTAGCGTCACATATCCCAGCTTCCGCCCGGG
CTCCATCACACCACTCATGAGAGAACCGAAGAACACCTA-AAAAAAGAGAACCGAAGAGGGGTCTACGCAGGCCACTGGC
CACAGTTCCAGCACGCCCGAGCACACAACGCAGCTGCACTGCAACCAGCCAATCAAAATCGAGAAACCAGCGCGCCACGG
ATCGCTCCCCTACGATCCGCGTGACTCATCTGAAACTAA-TCCTCACCACCCACTTCCCGCAGATCCAACGCTCAGAACT
CCA--CTCCCCTCCCGAAGCAC------------------------ATCGCGCCCAGAAACGCAAAAATTTCCCCAGACT
CGCGCCCACCGG-CCGCCTCCTCCCGCTCGTTAAAACCCCCGGACCCCCTC-CCCGTCTTCCTCATCCCAGC--------
----CCCCAAATCTCCCAAGCAGTTCGTCGCCTCAACCCC---GAGCCCGCCACCCCCACCCGCCAGCCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCGCAAGTCCGCCCCGGCCACCGGCGGCGTGAAGAAGCCGCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGCCTGGTG
CGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCGCTCCAGGAGGCCGCCGAGGC
CTACCTCGTGGGGCTGTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCGTAGGTTGCCTCGTATTT-------------------------------
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-----------------------------------------------------------------------------GTC
TGATCTGGA----GGTGTAGAGATGTTAGCTTCATCA---TAGCATGTGTC-----------TGATCTTGTATCGTGGTA
GGAAGGTCCCTC--GTTCGTGGTAGCTTGGCCGTGTTATGTTCTAGTG--TACTGTCTGATGTTACCCTCTTGTTGCCAT
CAGCAA--TGTGGAAGTTGGCTCTCAGATCTTAATTTTGTGCTTTGTGATGCC---------------------------
------------------------------------------------------------CATTGCGTAGATAGAAATTT
CTTGGAATTTTGTGCTTCGCGATGCCTTTTGCGCTCGTGCTGTTTGCAAACCTTATCGCGTTGAAAGAAATTTCTTGCAA
CCTGATAAGTGGCGATTTGTTCCTCCAGTTTTCAGTTTGTTCCATTACATGTTATTCCACTGTGATGCTAGTGGAATGAA
TCTTGTATTCTTTGAAGCCTAGTGCACTGATCTTTTTGATTTGACCTT--------------------------------
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>chr4D_732
GAA-----------------------------------------------------------------------------
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------------------------------------------------CCAATCAGAATCGAGGAACCCCCGCGCCGCGG
ATCACTCCCCGACGATCCGCGTGAATCGTCTGAAACTAAATCCTCACCACCCACTCCCCACAGATCCAACGCTCGGAACT
CCT--CCCCCCTCCCGAAGCAC------------------------ATCGCGCCCAGAAACGCAAAAATTTCCCCAGACT
CGCGCCCACCGG-CCGCCTCCTCCCGCTCGTTAAAACCCCCGGATCCCCTC-GCCGTCTTCCTCATCCCAGC--------
----CCCCAAATCTCCCAAGCAGTTCATCTCCTCAACCCT---GAGCCCGCCGCGCCCGCCTGCCCGCCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGGAAGCAGCTGGCGACCAAGGCGGCG----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------CGCAAGTCCGCCCCGGCCACCGGCGGCGTGAAGAAGCCGCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGCGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGCCTGGTG
CGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTGTCCGCGCTCCAGGAGGCCGCCGAGGC
CTACCTCGTGGGGCTGTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGATTT-----------------------------------------
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------------------------------------------------------------------TGCTTCGTGGTGCC
TGATCT-GA----CGTGTAGAGATGGTAGCTTCGTCT---TAGCATGTGTTGAGTGGTGGAATGATCTTGTATCGTGGTA
GGAGGAATCCTC--GTTCGTGCTAGCATGGCTTTGTTATGTTCTTGTG--TACTGTTTGATGTTACCCTCTTGTTGCCAT
CAGCAG--TGTGAAAGTTGACTATCAGATCTGAATTTTGTGCTTCGTCATGCCTATTGCCGT------------------
-----------------TTCAAACCTCAAATGTCAACGAATGG--TCTCTTAGCTTTATACATGGCGTTAATTGATGTTT
CTTTAAATATAA--GCCTGAAGCCTGAATG--------------------------------------------------
------AAGTGGCGCATAGTTCCTCCAGTTTTCAGTTTGTTCCATCTCATGTTTAGTATGTTT--------TGGAATGAA
TCTTGTATAGTTCGAAGGCTAGTGCACTGATCTTTTTGATTTGATCTTGTTATTGAAACGCTTATTGAAAAAACTGAAGG
CTAATGAGAAGAAATTAGCACAGCCCCAATGAAGTTTCTGACATCTGTCCCAGG--TTAGTTCACTGAACGTCAAC-ATA
GAGATATATAGTACTACG--------------------------------------------------------------
-----GTTAGTCTGAACCACTGCATTCGCTGTATCTACCACAATCGTTCAGTATTTGGTCA---------CTTGGTCAGT
AGCGTTACCGGGCAGCTTCTTTCTATTGATATTACTTGCTTGTTGCATTTCTAGTGAGATCATCTTT-------------
--------------------------------------------------------------------------------
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--------------------------------
>chr1A_735
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------------------------------------------------CCAATCAGGGCGCAGGAACCACCACGCCGCGG
ATCGCCC-CCCACGATCCGCGTGCCTCGCCCGAGGCCATATCCCCACCGTCCACTCTAC-CAAATCCAACGCTCCAAACC
CAC--CTCGCTTCCCAAAACCAGCACCCACCCGCCCCCGAAACCC-------------------AAAATTTCCGCAGCCT
CGCGCCCACCCG-CCGCCTA----------TTAAAATCCACCCGACTCCCC-GTCGTCCTCCTCACTCCAATCCCATCCT
CCATTCCCAGATCCCCCAAGAGCTCCCTCTCCCCCACCCACGAAGCG-------------CCTCCCATCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGGAAGCAGCTGGCGACCAAGGCGGCG----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------CGCAAGTCCGCCCCGGCCACCGGCGGCGTGAAGAAGCCCCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGCGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGCCTGGTG
CGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGGC
CTACCTCGTCGGGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGAGCGCCTCGAGCTTCGTCG-----------------GAGGTGTAG
AGG-----------------------------------------------------------------------------
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----------------------GTGTTAGGT---TCT---GAACCTGTGTTGCGTGGTGGAA--ATCTGGCGTTGTGGTA
GTAGGATTCTCTCTGTTCGTGCCATGGCGGCCGTGTTATGTTCTTGTGCTG--TGCCTGATGTAACCATCTTGTTACCAT
CAGCAA--TG--AAAGTTGGCTATCTGTTCTTAATTGTTTGCT-------------------------------------
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>chr1A_735
--------------------------------------------------------------------------------
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------------------------------------------------CCAATCAGAATCGAGGAACACCCACGCCACGG
ATCGCTG-CCCACGATCCGCGTGCCTCAGCCGAAACCAAATCCTCACCATCCATGGCTCGCAGATCCAACGCTCGAAACT
CGC--CTC---TCCCGAAACAC------------------------AGAGCGCCGAAAG-AGCGGAAAATTCCCCGGACT
CGCGCCCACCGG-CCGCCCCCTCTCG----TTAAAAGGAGCCCCGAATCCTTCCCTTGTTCCTCATTCCACT--------
----CCCCAAATCTCCCGAGCAATCCTCT-------CTCC---GCGCCCACGCAGCAAGCCCTCCACTCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGCAAGCAGCTGGCCACCAAGGCGGCT----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------CGCAAGTCCGCCCCGGCCACCGGCGGCGTGAAGAAGCCGCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGCCTGGTG
CGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGGC
CTACCTCGTCGGGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGTATGCTTCCTAGAATCCTAGTGTCTGATCTGTTCTCGAGGTGTAG
AGATGTGTTAGTTTCTTATCAGCCCGTGTCTGTGGTAGTAAGGTTCCTTGATGGTTGCGTTATGGTGTGG------TGTA
TGTGATGGTACCATCTTGTTATCATCATCAATGAGAAGTTAGC-AATCTGATTTCAAACATGCCTGCTTGTTCGTCTGGT
TTATCGATGGAT-----------------TTAGCCCTCAACGTTTTGGCAGCATTTGCTGCTAAAGGTGCCACTGAATTT
GATGAACATGACGCTCATATGCCCCAG---------------------------------TTCAGTTCAATCTGAAACTG
CTCACCTTGTATAATTCGAGTCCTGTTTCCTAATGCCCTTGCTCTGTCAATTCCTTTTTTTCCCTTCTAATCTTTACTCT
CAATTGTTGTGTGGAAAGGAACATAGTGGATTGGATAACTGCCTCTTTAGCTATTTG-----------------------
---------------------------------------TTGCCGGAGGTTGTCCCATAAACAAGTGTAGGGATCTGTAC
TC--TTTTTGGTGTGTATCCATGGAAGCTCTTTGTCGAAAAAATCCATGGAAGCTATGAAATTCTGGCGGTTCTAAGTGT
AACCGCTTTTGCAGTATCATGTGATGTTTTATTT----ACTCCTGTGTTTGTGGGTTTTGGACTCCAAATGGAATGGTAA
ATATCTGCACTCTGTTGAAGAATTAGTAAACTTTGTGACTCGACACTGTAGTTTAAATATAATTTTGAATCTGAGATAGC
TG-AATCAGTGTAATTGTGTCTTGTAATAGGCATTTGGTAGT-AGTAGCACATAAAAAAA---ATCAACTATAGCATCTT
ATATAGACTGAATTATTTCCAGTATTTGTTACTCTTCTGCACCAAATTGTGTCCAGTCTTCAGCTTGGGTTGTTTGTTGT
CTCAGGTTAGCTGCATCACTTAGCAATGTTTTCTTATCAGCTTCCTTGTTCA---------------------TCCACCA
GGCCATTAGTATGATAAATTCTCTAGTATCCATCACAGCATCACTCAAGCGTGAAGAAGTCTTAATTCTCTAGTAATATT
TTGATAATGGTAGAATGCAGTGAGGACTTGATGGCAAATGAAGACGTTTGCATCATGGAGTTTGTTGACAAGAGCTCCAT
ACCGACTACTATCAGGTTTGAGGAGACTCGTCATCATATTCCCAGTTATATATAATCACTATTATAACAGTGACAGTTTC
CTCCCTCAAATTGCTTGGGT----TTAGGCGAACAAAGTTTGCAGGGAACTCTAGTGCATAACCATTTCTTCCACTATGT
CTTACTGCAATGTATTCAGTTTATCTACAAAGTTTATATATCTCAGCTCATACAACTGAACCAAATATAAACATATCAGC
ATTAGATGCCCAATATTGAAAAAACTAAATGATCTATCAGATGCTGAACATTTTCTACCTATTAAGATGACACCAAGCTA
ATTGCTATTTACTCTGGTTTAAACTTTCAGGTATGGTTTAGTCAACGCGCAATTACATTTTGTATTTCGACAATTCTCCA
AGTTGTGCATGCCGTGATCCTGTCGGTTGCAGCAGAGTATTTCAGATCAGAATTACACTATTTATCTTCTCTTTTAGATG
GAAAACAGGCGAAGTATGCTAATATTTCTAACTTTGACATTCTCGAGTGCAGCCTCTTTCCGGAGCCCTCTGCTCAGCAA
GGGTGAGTTGCTGGCTAATTTTTTGTCAAAATACGTGAGACAGATGCCATTCAGAGATTAAGCAACACATGACGGCTTCA
CTACC-CCCCTTATGAAGAAACTGGTCGGCATTTGATAAGTGACCTGTCGAGTTTACGAGGCTTTGCTTCTTGTAGTTGG
CTTGCCATGATACTCAACAGAACACACTTTTTAAGGACACGTGTAGCTGTAAATTCCTCATTGATGGGAGTAATCTTACT
GCACAAAAATAGATACAGTAGATGATTTAAACCCTTCGTTCATCTATTTACATCTTTAGGTATTATCCAGAAAATATAGT
AGTATTGTCTGCAGTCCTCTGTTTATATTTTAAGTGTTAGGCTCTTCGAGGACAACAACCTCTGCGCCATCCACGCCAAG
CGTGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGCGATAGGGCCTAAGACTGCTTCGTAGCGTC
TGATCTGGA----AGTGTAGAAATGTTAGATTCGTCT---TAGCGTGTGTTGCGTGGTGGAGTGATCTTTTATCGTGGTA
GGAAGATTCCTC--GTTCGTGCTATCATGGCTGTGTTGTGTTCTAGTG--TA-TGCCTGATGTTACCCTCTTGTTATC--
-------------------------TGATCTTAATTTTTTGCTTCGTGATGCCTTTCTTTGTTTGT--------------
--------------------AAACTTGAAATATCTACCAACAG--TTTG--AGTGTTATCCATATCCTTGATCGAATTTT
CTGTGAACTTATATGCCT-AAAGCCCCACG--------------------------------------------------
------AAATGTCCCTTTGCTCCTTCAGTGTTCAGTTTGTTCCACCTCATGATTAGTAGGCTTAACCCCCTGATGTTTG-
---------------------------------------------CTAGGTACTGCAACAAT------------------
-----------------------------GAAAGTTTATGAAATCTGTCTGCTTGTTTTCTACACTGTACGTCTGG-TTC
CTGACATAGAGCCCCACACTATGTCTTGTTATTCTTTTTTTTTTGTTGAAATTATCTACACTGTCTTAATTTTCTACATT
GTCTTGTTATTCTGAACCATTGCATTTGTTGAAATTATCAAAA--GTTCAGTATTCATTTCTTTCTG-------------
-------------------------TTGATATTACTTGGTTGTTGCATTTCTACTGAGATCATCTTT-------------
--------------------------------------------------------------------------------
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--------------------------------
>chr1D_735
--------------------------------------------------------------------------------
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------------------------------------------------CCAACCAGAGCCGAGGAACACCCACGCCACGG
ATCGCTC-CCCACGATCCGCGTGCCTCAGCCGAAACCAAATCCTCACCATCCACGCCTCGCAGATCCAACGCTCGAAACT
CCC--CTCCCCTCCCCT------------------CCCGAAACAT-AG---------AG-CGCGGAAAATTCCCCGGACT
CGCGCCCACCTG-CCGTCTCCCCTCC----TTAAAACGGCCCCCGAATCCC-TCCTTGTTCCTCATTCCACTTCCAC---
----TCCCAAATCTCCCGAGCAATCCTCT-------CTCC---GCGCCCACGAAGCAAGCTCTCCACTCCCGATGGCCCG
TACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGGAAGCAGCTGGCGACCAAGGCGGCG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGCAAGTCCGCCCCGGCCACCGGCGGCGTCAAGAAGCCCCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGTGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTGGTG
CGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGGC
CTACCTCGTGGGGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGGCTGCTTCCTAGAATCTGG-------------TCTCGAGGTGTAG
AGATGCGTTAGTTTCTTCTTAGCCCGTGTCTG------------------------------------------------
--------------------------------------------------------------------------------
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>chr1B_735
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------CCAATCAGAATCGAGGAACACCCACGCCACGG
ATCGCTG-CCCACGATCCGCGTGCCACACCCAAAACCAAATCCTCACCATCCACGCCTCGCAGATCCAACGCTCGAAACT
CCC--CTCCCCTCCCGAAACAC------------------------AG---------AG-CGCGGAAAATTCCCCAGACT
CGCGCTCACCCG-CCGTCTCC-CTCC----TTAAAACGGGCCCCGAATCCCTCC-TTGTTCCTCA------TTCCAC---
----TCCCAAATCTCCCCAGCAACCCTCT-------CTCC---GCGCCCACGAAGCAAGCTCCACACTCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGCAAGCAGCTGGCGACCAAGGCGGCG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGCAAGTCCGCCCCGGCCACCGGCGGCGTGAAGAAGCCCCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTGCCGTTCCAGCGCCTGGTG
CGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGGC
CTACCTCGTCGGGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGGCTGC----------------------------------------
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>chr1B_735
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------CCAATCAGAGCCGAGGAACACCCGTGCCACGG
ATCGCTC-CGCACGATCCGCGTGCCTCACCCGAAACCAAATCCAGACCATCCACGCCTCACAGATCCAACGCTCGAAACT
CCC--CTCCCCTCCCCT------------------CCCGAAACACAAG---------AG-CGCGGAAAGTTCCCCGGACT
CGCGCCCACCCG-CCGTCTCC-CTCC----TTAAAACGGCCCCCTAATCCCTCC-TTGTTCCTCA------TTCCAC---
----TCCCAAATCTCCCCAGCAATCCTCT-------CTCC---GCGCCCACGAAGCAAGCTCTCCACTCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGCAAGCAGCTGGCCACCAAGGCGGCG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGCAAGTCCGCCCCGGCCACCGGCGGCGTGAAGAAGCCCCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTGGTG
CGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGGC
CTACCTCGTCGGGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGGCTGCTTCCTAGAATCCTAGTGTCTGATCTGGCCTCGAGGTGTAG
AGATGCGTTAGTTTCTTATTAGCCCGTGTCTGTGGTAGTAAGGCTCGTTGACGGTTGTGTTATGGTGTGTGTGTGATGTA
TGTGATGGTACCATCTTGTTATCATCATTAGTGGGAAGTTAGCAAATCTGATTTTAAACATGCCTGCTTGTTTGTCTGAT
CTCAGTAAACGTTTTGGTTTGTCTATATATTATCCCTCAATGTTTTGGCAGCATTTGCTGGTAAAGGTGCCACTGGATCT
GATGAACATGAGGTTCATATGCCAGCAAATGCACAACAAGGTGAGCAGCAGCAGGTGTCATTCAGTTCGACCTGCCCCTG
CTCACCTTGTACTA----------------TAATGCCCTTGCTCTCTCAATTTCTTTTCCCCCCTTTTGATGGATACTCT
CAAATTTTGTGTGGAAAGGAACATAGTGCATTGGATAACTGTCTCTTCTTTGACTACAATGTTGTGCTTTTGAGTGCCAA
TCTATTTGAATGTTAAGTTTCAAATGTTCTGTCCATTTATTGCTGGAGGTTGTCCCATAAACAAGTGTATCGATCTGTAC
CTTTTTTTGGGTGTGTATCCGTGGAAGATCT--------------------------GAAATTCTGGCTGTTCTAAGTGT
AACTGGTTTTACAGTAT---GTGATGTTTTCTTTACTGACTCCTGTGTTTGTGGGTTTTGGACTCCAAATGGAATAGGAA
ATATCTGCACTCTGTTGAAGGATTAATAAACTTTGTGAGTCGCCATTGCCGTTTAAATATAATTTTGAATCTGAGATAGC
TGCAATCAGTGTAGTTGTGTCTTGTAATAGGCATTTGTTATTAAGTAGCACATAAAAAAATTAATCAACTGTAGCATCAT
ATATAGACTGAATTATTGCAAGTAATTGTTACTCTTCTGCACCAAATTTTGTCCAGCCTTCAG-TTGGGTTGTTTGTTGT
CTCTAGTTAGCTGCATCACTTTCTCAGCGATGT---TCAGCTTCCTCGTTGCATGCATATTCTCCATGTCCCGTCCACCA
GGCCATTAGTATTATAAATTCTCTAGTATCCATCACAACATCACTCAAGCGTGAAGAAGTCTTAAT--------AATCTT
TTTATAATGGTAGAATGCAGTGAGGACTTGATGGCAAATGGAGACGTTTGCACCATGGAGTTTGTTGACAAGAGCTCCAT
ACCGACTACTATCAGGTTTGAGGAGACTCATCACCATATTCCCAGTTACATGTAATCACTATTATAATAGTGACAGTTTC
CTCCCTCAAATTGCTTGTGTCCAGTTAGGCAAACAAAGTTCGTAGGAGACTCTAGTGCATAACCATTTCTTCCACTATGT
CTTACTGCAATGTATTCAGTTTACCTACAAAGTTTATATATCTCAGCTCATACAACTGAACCAAATAAAAATATATCAGC
ATTAGATGCCCAAGATTGAAAAAACTGAATGATCCATCAGATGCTGAACATTTTCTACCTATTAAGAAAACACCAAGCTA
ATTGCTATTTACTCTGGTTTAAACTTTCAGGTATGGTTTAGTCAACGCGCAATTACATTTTGTATTTCGACAGTTCTCCA
AGTTGTGCATGCCGTGATCCTGTTGGTTGCAGCAGCGTATTTCAGATCAGAATTACACTATTTATCTTCTCTTTTAGATG
GAAAACAGGCGAAGTACGCTAATGTTTCTAACTTTAACATTCTGGAGTGCAGCATCTTCACGGAGCCCTCTGCTCAGCAA
GGTTGAGTTGCTGGCTAATTTTTTGTCAAAGTACGTGAGACAGACGCCATTCAGAGATTAAGCAACACATGACGGCTTCA
CTACCCCCCCTTATGAACAAACTGGTCGGCATTTGATAAGTGACCTGTCGAGTTTACGAGGCTTTGCTTCTTGTAGTTGG
CTTGCCATGATACTCAACATAACACACTTTTTAAGGACACGTGTAGCTGTAAATTCCTCATTGATGGGAGTAATCTTACT
GCACAAATATAGATACAGTAGATGATTTAAACCCTTCGTTCCTCTATTTACATCTTTAGGTATTATCCAGACAATATAGT
ATTGC---CTGCAGTCCTCTGTTTATATTTTAAGTGTTAGGCTCTTCGAAAACACCAACCTCTGCACCATCCACGCCAAG
CGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCACCCGTGGCGAGAGGGCCTAAGACTGCTTTGTAGCGTC
TGATCTGGA----AGTGTAGAGATGTTAGATTCGCCT---TAGCGTGTGTTGCTTGGTGGAGTGATCTTTTATCGTGGTA
GGAAGATTCCTC--GTTCGTGCTATCATGGCTGTGTTATGTTCTAGTG--TA-TGCCTGATGTCACCCTCTTGTTATCAT
CAGCAACGTG--AAAGTTGGCTATCTGATCTTAATTTTGTGCTTCATGATGCCTTTATTTGTTTGT--------------
--------------------AAACTTGAAATATCTACCAACAG--TTTTTTAGCGTTATCCATGCCCTTGATCCAATTTT
CTGCAAACTTAT--GCCT-AAAGCCCCACG--------------------------------------------------
------AAATGGCCCTTTGCTCCTTCAGTGTTCAGTTTGTTCCACCTCGTGATTAGTAGGCTTAACCCCCTGATG-TTG-
---------------------------------------------CTAGGTACTGCAACAAT------------------
-----------------------------GAAAGTTTATGAGATCTGCCCTTTG--CTCCTTCAGTGTACGTCTGGCTTC
CTGACATAGAGCCCCACAGTATGTCTTGTTATTCATT-TTTTTTGTTGAAATTATCTACACTGTCTTAATTTTCTACACT
GTCTTGTTATTCTGAACCATTGCATTTGTTAAAATTATCAGAA--GTTCAGTATTAATTTC-------------------
--------------------------------TACTTGGTTGTTGCATTTCTACTGAGATCATCTTT-------------
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>chr1D_759
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------------------------------------------------------------------------CGCCACGG
ATCGCTG-CCCACGATCCGCGTGCCTCACCCGAAACGAAATCCTCACCATCCATGGCTCGCAGATCCAACGCTCGAAACA
CGCCTCTC---TCCCGAAACAC------------------------AGAGCGCCGAAAG-AGCGGAAAATTCCCCAGACT
CGCGCCCACCGGGCCGCCCCCTCTCG----TTAAAAGGAGCCCCGAATCCTTCCATCGTTCCTCA------TTCCAA---
----CCCCAAACCTCCGAAGCAATCCTCT-------CTCC---GCGCCCACGAAGCAAGTCCTCCACTCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGGAAGCAGCTGGCCACCAAGGCGGCG----------
--------------------------------------------------------------------------------
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----------------------CGCAAGTCCGCCCCGGCCACCGGCGGCGTGAAGAAGCCCCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGCCTGGTG
CGGGAGATCGCACAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGGC
CTACCTCGTCGGGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAGGCTGCTTCCTG----------------------------------
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>chr1B_1011
CCGCC---------------------------------------------------------------------------
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--------------------------------------------------------CCACCCTCCCTTCCCGATGGCCCG
CACGAAGCAGACGGCGAGGAAGTCCACCGGCGGCAAGGCGCCGCGGAAGCAGCTGGCGACCAAGGCGGCG----------
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----------------------CGCAAGTCCGCCCCGGCCACCGGCGGCGTGAAGAAGCCCCACCGCTTCCGCCCCGGCA
CCGTCGCGCTCCGCGAGATCCGCAAGTACCAGAAGAGCACCGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTGGTG
AGGGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCGCTGCAGGAGGCCGCCGAGTC
CTACCTCGTCGGGCTCTTCGAGGACACCAACCTTTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCC
AGCTCGCTCGCCGCATCCGTGGTGAGAGGGCCTAGAGCGTGTCGAGCTTCTTCG-----------------GAGGTGTAG
AGA-----------------------------------------------------------------------------
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----------------------ATGTTAGCT---TCT---GAACCTGTGTTGCGTGGTGGAA--ACCTGGTGTCGTGGTA
GTAGGATTCCTC--GTTTGTGCCATGGTGGCTGTGTTGTGTTCTTGTGCTG--TGCCTGATGTAACCATCTTGTTACCAT
CAGCAA--TGA-AAAGTTGGCTATCTGTTCTTAATTGTTTGCT-------------------------------------
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>SNPs
--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S---------S---------
---S-S--S----S--------------S----------------------------------S---------S---S--
----S----S----------------------S--------S--------SS--------------------------S-
------------------S--------------------S-------------S-----------------S--------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S-------------------S------------
-----------------------------S--------------------------------------SS----------
-----------S----------------------------------S---------------------------------
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------------------------------S-------------------------------------------------
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---------SSSS------------------------SSS----------------------------------------
-------------------------S----------------------SS------------------------------
-----------------------S----------S-----------------SS----------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS--------------------------SS-----------------------------S-----
-S----S-------------------------------------------------------------------------
-------------------------------------------S--------------S---------------------
----------------S----------S-----SSS------------------------SS------------------
---------------------------------S-S-------------------------S------SS----------
--------------------------------------------------S--SSS------------------------
-----------S---------------------------------S----S-SSS-S-S-SSS-SS-SSS----------
---SS---S----------------------------------------------------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_58
--------------------------------------CAAGCTGGGATGGTCGAGTT----------------------
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>reverse_4866
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-----------------------------------------------------------------AGTGCCTTGGTCAGT
AGCTG---------------------------------------------------------------------------
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--------------------------------
