>input_sequence_68235
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----------ATGGC---------GAGCACCGCGCTGAGCATGAAGCTCCTCATCGACACCAAGGCCCAGCGCGTGCTGT
TCGCGGAGGCGAGCAAGGACGTGGTGGACTTCCTCTTCTCCCTACTCTCGCTGCCCGTCGGCACCGCCGTCAAGCTGCTG
GGGAAGGAAGCCATGGTCGGCTGCGTCGGCAACCTCTACGGCAGCGTCGAGAAGCTTGACAGCACCTACGTCCAGCCCGA
CGCGGCCAAGGACGCCCTCCTCCACCCCGCCGTGCTCTCGCCCGCGGCTGGCACCAAGA---------TGTTCCGCTTGA
CGCAGCCGTCTTCT------------------GGGCAGTCCAAGGGATTCTTCAAATGCAGCTA----------------
-----------------------------------------------------------------------------CAG
CGGCTGCACCAGCTACGTGACCGACACCAGCGGCACCATGTGCCAGTGCGGTCGCGGTTGCTCGATGACCACGGCCATGC
ACTTCATCCCAGGCAATG---------GCAAGGT-------------------------GGCCGCC---------AGCGT
CGGCACCAAGGGGTTCGTGCAGGGCATCGTGACGTACACGGTGATGGACGATCTCGCCGTGACGCCCATGTCCTCCATCT
CCAGCATCACCCTGCTCAACACATTCGCCGTCAAGGATCTCAGCGCGCTCCAGGAGAAGACCGTG--CAGCTCGGCTACG
ACGAGGTG------------------CGCTTTCTCTTATCATA------TGATGTGCATGTTTC--------------TC
TCTTCCATATTTCTTTGTT--AATCATGTGCATCA-------GT----AAATCGTCGCGTTCCATTTCCTCTGAATCTTG
CAGGGCCTGGAGATCCTCAAGGCGTCGCTGCAGTCCAAGACCGTCCTCACCGACGTCTTCCTCAAGGCCCCCAGCAGCGC
TTGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr3A_1_TraesCS3A01G029000
GGTTGGAGTGACATGTCCATTTGAATCCTATAGAATTGGCAATGATTGTTTAATGCCACGGAAAAAACAAAGGAATTATA
AAAAAAGGTTGGAGTGGAAGTTAAATTTTCTATGAAGGGCCTCTTTGATTCGTAGGATTTTGAAAACGTAGGCATAGAAA
AAGTGTAGGGTTGGAGTGACATGCCCATTTGAATTCTATAGAATTTTGATGTCACAGGAAAAATAAAGAAATTGTAAAAA
AAGGTTGGAGTGGATGTTAAATTTTCTATGAAATGTAGTATAAAAGATTCCATAGAAAAATTCCTATGAGATCTAATTCT
ATGAATCAAAGGACCAATATAGGAAAAATCCTAAAGATTTCAATTCATCAGAAATCCTATAAAATTTCTTTGAATCAAAG
AAGCTCTTATCGTCCCAAACAGACGAAATTTAAACAAAATGAAGGTGTGTTTAGAATCGTGCGTTGGTGGCGTTACGATT
CGGCCTACGCTGGCACGGCAGTGCGGTGCGTGGGCGCCCTAGACAAATGCGATAGCTCGAGACCTCATCCGAGCCATCTC
GTCGGCGATAGACGGTGCTCGAGACCTCATCCGAGCCATGTCGTCGGCGATAGATGGTGCTAGTGGCTGGCATGATGATG
ACGCTCCGGCAAGTTGGTACCGCCTCATCACGGTCGCCGTGCCTATCGACTCGACTGCCGTGCGCGCAGGGATC----CC
GTCACTGAGTCGCGCGCTGTTTTGTCACGGTCACAGATCTAGTACCTGCCAACACAAATCGTTTTGCTCTCAGCGCAAGC
CTAG---TCTGTCCATGGCCATGCCC----------------------------------------------CCATGAGC
TGCTCTCTCTCTATCTCCCGTCTCGTCACCTCGGTCCAATCCACGGCCAGCTCTGGCTCCTCTTCCCCTTTTAAATACTC
AAACAGCACGCTCGGTGCCAAGCACTCAAGCCTATTTCTCCTTGGTCCTCAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CTCACCACCACACACGCCACAG--------GCAAGGCAA
GAGCTTCAGAATGGC---------GAGCACCGCGCTGAGCATGAAGCTCCTCATCGACACCAAGGCCCAGCGCGTGCTGT
TCGCGGAGGCGAGCAAGGACGTGGTGGACTTCCTCTTCTCCCTACTCTCGCTGCCCGTCGGCACCGCCGTCAAGCTGCTG
GGGAAGGAAGCCATGGTCGGCTGCGTCGGCAACCTCTACGGCAGCGTCGAGAAGCTTGACAGCACCTACGTCCAGCCCGA
CGCGGCCAAGGACGCCCTCCTCCACCCCGCCGTGCTCTCGCCCGCGGCTGGCACCAAGA---------TGTTCCGCTTGA
CGCAGCCGTCTTCT------------------GGGCAGTCCAAGGGATTCTTCAAATGCAGCTA----------------
-----------------------------------------------------------------------------CAG
CGGCTGCACCAGCTACGTGACCGACACCAGCGGCACCATGTGCCAGTGCGGTCGCGGTTGCTCGATGACCACGGCCATGC
ACTTCATCCCAGGCAATG---------GCAAGGT-------------------------GGCCGCC---------AGCGT
CGGCACCAAGGGGTTCGTGCAGGGCATCGTGACGTACACGGTGATGGACGATCTCGCCGTGACGCCCATGTCCTCCATCT
CCAGCATCACCCTGCTCAACACATTCGCCGTCAAGGATCTCAGCGCGCTCCAGGAGAAGACCGTG--CAGCTCGGCTACG
ACGAGGTG------------------CGCTTTCTCTTATCATA------TGATGTGCATGTTTC--------------TC
TCTTCCATATTTCTTTGTT--AATCATGTGCATCA-------GT----AAATCGTCGCGTTCCATTTCCTCTGAATCTTG
CAGGGCCTGGAGATCCTCAAGGCGTCGCTGCAGTCCAAGACCGTCCTCACCGACGTCTTCCTCAAGGCCCCCAGCAGCGC
TTGAAGGCACATCAGTCATCAGATCGGCATGG-------ATGGAAAAGTGGCTCGATGCCACGATTCACGTAGGGTTAAG
TTGGTT----GGTTGGTCCTTTTGTA---TGGACATGT-GCAAG-----GGCTAGTAGCTCCATCCATGTAGCTAAATTA
GCTTGGTGTTTTGTGTGAGCA-TCAGAACTATCTTACCGTGGCATCTTTTGGTAATGCCTAGCATCAGGCCACATGCTCG
TATCAGGGTGTACTAGTACGTTGTGTCGGTGCTTGATGTATGCGTTTGCATCGTACTTAGTATCATCTTATATTGGTTTT
CAAAATCTTTTCC---TAATAATAAAGCACGGATTGACTTCGTGGGTTCATTGTCACAATACGCTTTTTTCTCATATCAT
AATACGCTTTTACAATTTGTATAAACAAAATTGTAATATAAACGAGGTGGTACTAATTTGGGGGCCGTCATCTACGTTTA
GTCCCGTCAACATGGGGGGCACAGGAGAAGAAAGGAGCACCACCAGATGGCATGGATGACCGAAGACAATTGATGGGGAT
GCCCTTGCGGCCTAGGGAATCGATTGGGGAGAATTGGCGC----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGG
GGAAGTGAAGAGGAGGAGCAGGAGCATGGGGAAGTGAAGAGAAGAGGAGAGGAGCAGGAACATGCTTTGCTTTGGCGCCA
TGGATGGAAGAAGAACGA------GGCCGAGGCTGACGGCAACAACGGCCGAGGCCAAGAGTCCGTAGCCACACCACTAC
AGCTCCACACGGACACGGGTGCGATGGAACTAGCCAACAACTCAATGAGCAGAAGCAGCACGGTTGCTGCGGTTTGCTCG
AACTCTGACTGACGACATGACGGCGTGCGTGGACCTCGGTGTAGCGCCGACAGACGAGTATGGCAGGCCATCGAGGCCGA
GCACCTCCCCCTAAGCTACTTGCCTTCCTACATTTGTCTCAGCTTTGACGAACTACAGGATGGACTGATTTCCAACTAAT
GCCACTCATGCATGATATGATCGGACAAGTG
>chr4A_664
--------------------------------------------------------------------------------
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-----------------------CTCATCACGGTCGCAGTGCTTATCGACTCGACTGCCGTGCGCGCAGGGATCAATCCC
GTCGGTCACTCGCTCATTGTTTTGTGACGATCACAGATCC---ACCTCCCAACACAAATCGTTTTGCTCTCAGCACACGT
TTGCTCCTCTGTCCATGGCCATGCCTCGTGCGCTGCGCGCGCGCGCTCTCTCTCTCTCTCTCTCCCTCTCTTCCATGTGC
TGCTCTCCGTCTCTCTCATGT---------------------------AGCTCTTGCTCTTCTTCCTCTTTAAATACTCC
--ACAGCACACTCGCTGCCAAGCACTCAAGCCTATTTCTCTTCGATGTTGGCCCAGACCCGACGCCGAGTACTTTCCGAC
GTAGGACGACACCCGATGAACGACGATAAAGCAATGCTGACGATCCCTATAAAGCAATGTTGACGATAAAGCAATGCTGA
CGATAAAGCAATGTTGTTTCTTCGTATTGCTCTCACAATTCCACATGATTACAAGCCAGGGGTACATGACTATATATACT
AGGTACAACTAGTCTAGTCCTATTCGGTGATCAGGTAGAAACCTACACGGACTCTTACTTGTATACGTACACAGGAGCGG
ACACTGACACAAGTTGCCGTGTTTAATTCTAACATTCGGTCCTCCTCACCATCCCCATACAAGTCTGAGGCGCAAGGCAA
GAGCTACGGAATGGCGACCACCGGGAGCACCGCGCTGAGCATGAAGCTCCTCATCGACACCAAGGCCCGGCGCGTGCTGT
TCGCGGAGGCGAGCAAGGACGTGGTGGACTTCCTCTTCTCCCTCCTCTCCCTGCCGGTCGGCACCGCCGTCAAGCTGCTC
GGCAAGGACTCCATGGTCGGCAGCGTCGGCAGCCTCTACGGAAGCGTCGAGAAGCTCGACGCCACCTACGTCCAGCCCGG
CGCCGCCAAGGACGCGCTGCTCCACCCCTCCGTCCTCTCGCCGGCGGTCAGCACCAAGAGCTCCCTCCT---AGGCTTGC
CGGGGCCGCCGCCTC------------CACAGCCACAGGCCAAGACGTTCTATGGGTGCAGCTTGTCCTGCGGCTG----
--------------------TTACAATAGCGGATATG------GTAGCGGCC------ACTCCGGTACATGCAAATTCTA
CAGCTGCCGGACCTACGTGACGGGCAGTTACGGCACCTACTGCCCGTCAT---GTGATAAGCAGATGACCACGGAGGCGA
AGCTCGTGCCGTCGGGCGTGTCCGGAGGCCA----------------GACTGCGCAGGCGGTGGCC---------GGCGT
CAGCGGGAAGGGGTACGTGCAGGGCATCGTGACTTACACGGTGATGGACGACCTCACCGTGACGCCCATGTCCTCCATCT
CCAGCATCACCCTGCTCAACACATTCGCCGTCAAGGATCTCAGCGCGCTCCAGGAGAAGACCGTG--CAGCTCGGCTACG
ACGAGGTGACAATGAATCCTCACTATCGCTTTCTCTGGCATATATG----------------------------------
TCTTCCATATTTCTTTGTTGTAATCATGTGCATCA-------AC----CAATCGTCACATTGGATTTCCTGCAATTTTTG
CAGGGTCTGGAGATCCTGAAGGCGTCGCTGCAGTCCAAGACCGTCCTCACCGACGTTTTTCTGAGCCCCGCCCGCAAGGC
TTGAAGCCACGGTCCT--GCGCCTCACGCCATG-TCGACATGGAAAAGTAGCTCGATGCATCGATCCATGTAGGGTGAAT
TAAGTC----GGTTGGTCCTTTTGTA---TGAACATGTTGCAAG-----GGCTAGTAGCTCCATCCACCTAACTAAAATA
GGTTGATGTCTCGTGAGGCTATCAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr3A_933
--------------------------------------------------------------------------------
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-------------------------TCAAGCCTATTTCTCCACAGTTCTCAC----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------GCCCTCACCACCACAAACACAAAGGTCAGTCAGTC-------
------CAGAATGGC---------GACCACCGCGCTGAGCATGAAGCTGCTGGTGGACACCAAGGCGCGGCGCGTGCTGT
TCGCCGAGGCGAGCAAGGACGTGGTGGACTTCCTTTTCTCCATCCTCTCCCTGCCCGTCGGCACCGCCGTCAAGCTGCTC
GGCAAGGGCTCCATGGTCGGCAGCGTCGGCAGCCTCTACGCCAGTGTTGAGAAGCTCGACGGCACCTACGTCCAGCCCGG
CGCCGCCAAGGACGCGCTCCTCCACCCCGCCGTCCCATCCCCGGCCGTCAGCAACAAAAGCTCCCTCCTCTTAGGCTCGC
CGCCGCCGCCGGCGTCGTCCATCCGGGCCCAGCCCCAGCCGACGACGTTCTTCGGATGCAATAGCCAGTGCAGGTCGCGC
AACTACGACTACGACAGCGTCTACGTCTACGACGAGGGCGAGTGTGGCCGCC------AGCAACTTTC------TTGCAG
CGGTTGCCGTAGCTACATGACGGACAAGAGAGGCACCGCCTGTCCGTCGT---GTGGCGGCCAGATGTCCAAGGAGTTGA
AGCTCGTGCCGTCAGCGGTGTCCGGACGGCA----------------GG----------------C---------GGCGT
CGCCGGAAAGGGGTTCGTGCAGGGCATCGTGACGTACACGGTGATGGACGACCTCACCGTGACGCCCATGTCGTCCATCT
CCAGCATCGCCCTGCTCAACACATTCGGCGTCAAGGACCTGGGCGCGCTCCAGGAGAAGACCGTG--CAGCTCGGCTACA
ACGAGGTACAGTACATACATACATGCATGCATGATCCACACTTGCCCCGTCAAATGGATGCTTC--------------CA
TGTTCCTTCTTCGTTCTTG--AA-AAACCGCATCAAGTACGTATCAATCAACCGTCACGCTTGCA------------TTG
CAGGGTTTGGATATCCTCAAGGCGTCGCTGCAATCCAAGACGGTCCTCACCGACGTTTTCCTCAAGCTC---AGCAACGT
TTGAAGGCACGGTCCT--GCGTCTGACATGCTCATCGACATGGAAAA---------------------TGTAGGGTTAAG
TAGGTAGGTAGGTTGGTCCTTTTGTAGTATGAACATGT-GCAAG-----GGCTAGTAGCTCCATCCATGTAGCTAAATTA
GGTTGGCTCTTCGTGTGAGCA-TCAGAACTATCGTACCGTCGCATCTTTTGGTAATGTCTAGTATCAGG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------
>chr3A_1005
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--------------C---------GACCACCGCGCTGAGCATGAAGCTCCTGGTGGACACCCAGGCCCGGCGCGTGCTGT
TCGCGGAGGCGAGCAAGGACGTGGTGGACTTCCTCTTCTCCCTCCTCGCGCTGCCCGTCGGCACCGCCGTCAAGCTGCTC
GGGAAGGAGGCCATGGTCGGCTGCGTCGGCAGCCTCTACGGCAGCGTGGAGAAGCTCGACGGCACCTACGTCCAGCCCGG
CGCCGCCAAGGACGCGCTGCTCCACCCCGCCGTCCTCTCGCCGTCGGCCAGCAGCAAAAGCTCCCTCCT---GGGCATGC
CGCCGCCGCCGTGC------------------CCACAGGCGAAGGCGTTCTACAGATGCAGCAGGCAGTGCAACTG----
--------------------CTACAGCGACGGATATGACGGCAGCAGCAGCC------AGCAGGCTAG------ATGCAA
CAGCTGCCGGACTTACATGACGGAGAGTTACGGCACCTACTGTCCATCGT---GTAAGAACCAGATGACCACGGCCTTCA
CGGTCGTGCCGTCGGCCGCGTCCGGAGGCGAGGTGGCGCAGGCGGCGGG----------------C---------GGCGT
CAGCGGGAAGGGGTTCGTGCAGGGCATCGTGACGTACACGGTGATGGACGACCTCACGGTGACGCCCATGTCCTCCATCT
CCAGCATCACCCTGCTCAACACCTTCGCCGTCAGCGACCTCAGCGCGCTCCAGGAGAAGACCGTG--CAGCTCGGCTATG
ACCAGGTGATTATGAATCTC--ATCAGCAG------TATCATA--------------------C--------------TC
CATTCGATATGTCTTCGTT--AACCATGTGCATCA-------ATCAATCAATCGTCACGTTGCATTTCCTCTAAATTTTG
CAGGGTCTGGAGATCCTCAAGGCGTCGCTGCAGTCCAAGACCGTGCTCACCGACGTTTTCCTGAAGCCCCCCAGCAGCGC
TTGAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr3B_1005
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--------------C---------GACCACCGCGCTGAGCATGAAGCTCCTCATCGACACCAAGGCCCGGCGCGTGCTGT
TCGCGGAGGCGAGCAAGGACGTGGTGGACTTCCTCTTCTCCCTCCTCGCGCTGCCCGTCGGCACCGCCGTCAAGCTGCTC
GGGAAGGAGGCCATGGTCAGCTGCGTCGGCAGCCTCTACGGCAGCGTAGAGAAGCTCGACGGCACCTACGTCCAGCCCGG
CGCCGCCAAGGACGCGCTGCTCCACCCCTCTGTCCTCTCGCCGGCGGTAAGTAGCAAAAGCTCCCTCCT---AGGCTTGC
CGGCGCCGCCATCC------------------CCACAAGCGAAGACGTTCTACCGATGCAGCCTGCAGTGCATCTG----
--------------------CTACAGCGGCGGATATG------GCAGCAGCAGCAGCGAGCAGGCTAG------ATGCAA
CACCTGCCGGACTTACATGACGGAGAGCTACGCAACTTCGTGTCCATCAT---GTAACAACCAGATGACCACGCCCTTCA
CGGTCGTGCCGTCGGCCGGGTCCGGAAGCAAGGT-------------------------GGCGGCC---------AGCGT
CAGTGGGAAGGGGTTCGTGCAGGGCATCGTGACGTACACGGTGATGGACGACCTCACCGTGACGCCCATGTCCTCCATCT
CCAGCATCACCCTGCTCAACACATTCGCAGTCAGGGACCTCAGCGCGCTCCAGGAGAAGACCGTG--CAGCTCGGCTATG
ACCAGGTGATTTTGATTTATGAATCATCAG------TAGCATA--------------------CACGTTTCTCTCTCTTC
CGTTCGATATGTCTTTGTT--AACCAT-------------------------------GTTGCATTTCCTCTAAATTTTG
CAGGGTCTGGAGATCCTCAAGGCGTCGCTGCAGTCCAAGACCGTCCTCACCGACGTTTTCCTGAAGCCCGCCAGCAGCGC
TTGAAGGCAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr3D_1010
--------------------------------------------------------------------------------
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----------------------------ACCGCGTTGAGCATGAAGCTCCTGGTGGACACCCAGGCCCGGCGCGTGCTGT
TCGCGGAGGCGAGCAAGGACGTGGTGGACTTCCTCTTCTCCCTCCTCGCGCTGCCCGTCGGCACCGCCGTCAAGCTGCTG
GGGAAGGAGTCCATGGTCGGCTGCGTCGGCAGCCTCTACGGCAGCGTGGAGAAGCTCGACGGCACCTACGTCCAGCCCGG
CGCCGCCAAGGACGCGCTGCTCCACCCCTCTGTCCTCTCGCCGGCGGTAAGTAGCAAGAGCTCCCTCCT---AGGCTTGC
CGGCGCCGCCGTCC------------------CCACAGGCGAAGACGTTCTACAGATGCAGCAAGCAGTGCATCTG----
--------------------CTACAGCGGCGGATATG------GCAGCAGCC------AGCAGGCTAG------ATGCAA
CAGCTGCCGGACTTACATGACGGAGAGTTGCGGTACCTACTGTCCGTCAT---GTAACAACCAGATGACCACGCCCTTGA
CGGTCGTGCCGTCGGCCGGGTCCGAAGGTCCGGT-------------------------GGCGGAGACGGCGGTGGGCAT
GAGCGGGAAGGGGTTCGCGCAGGGCATCGTGACGTACACGGTGATGGACGATCTCACCGTGACGCCCATGTCCTCCATCT
CCAGCATCACCCTGCTCAACACATTCGCCGTCAGGGACCTCAGCGCGCTCCAGGAGAAGACCGTGTCCAGCTCGGCTATG
ACCAGGTG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr3D_1466
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------AAGGGGTTCGTGCAGGGCATCGTGACGTACACGGTGATGGACGACCTCACCGTGACGCCCATGTCCTCCATGT
CCAGCATCACCCTGCTCAACACATTCGGCGTCAGGGACCTCGGCGCGCTCGAGGAGAAGACTGTG--CAGCTCAGCTACA
ACGAGGTACA-----TACATACATGCCCT-------------------GTCAAATGGATGTTTT--------------CA
TGTTCCTTCTCTGTTCTTG--AAGAATCCGCATCAAG----TATCAATCAACCGTCACGCTTGCA------------TTG
CAGGGTTTGGATATCCTCAAGGCGTCGCTGCAGTCAAAGACCGTCCTCACCGACGTTTTCCTCAAGCCC---AGCAAGGT
TTGAAGGCACGGTCCTGCGCGTCTGACATGCTCATCGACATGGAAAAATAGCTCGAA--------CCATGTAGGGTTAAG
TA------------GGTCCTTTTGTA---TGAAC-TGT-GCAAGGGCGCGGCTAGTAGCTCCATCCATCTAGCTACATTA
GGTTGGCTCTTTGTGTGAGCATTCAGAACTATCTTACCGTGGCATCTTTTGGTAATGTC-AGTATCAG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr4A_2107
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--AAATCTTTCCCTAATAATAATAAAACACGGATTGACTCCATGGGTTCACCGTCACAATACGCTTTCTTCTCATGTCAT
AATACGCTTTTACGATTTGTATAGATAAAATCATAACATAAACTAGGTGGTACTAATTTGGGGGCCGTCATCTACGTTTC
GTCCGTCAACTGTCCCTGCGTGGGTTGCAGTTTTTGATTTTCGTGGTGGGCCAAGTTGGGCCAAGCTGCGCATAAAAAAT
AGTTGCTAATGGTTTGGGGTTTCAAACACACGATCTTTCTTTCCGTATGACGATACTGATTACCTACAGAATTAAATATA
GTCCCACATCGTCCCTTTGCATTAAAGAGCATCAATTTATGTAGGTCTGAGTTATACAAGAAAACAAGCAGGCTCGAAAA
TAAAGAAAACAGGCTGAGATGTGGGCCTCGGTGGTGTATGGATGCGTGTGATAGAAAGAACAAAGAACAGGGGCTCGTGG
GGAAGTGAAGAGGAGGAACAGGAACATGGGGAAGTGAAGAGAAGAGGAGAGAAGCAGGAACATGCTTGGCTTTGGCGCCA
TGGATGGAAGAAGAACGACGCCGAGGCCGAGGCTAACGTCAACAACGGCCGAGGCCAAGAGTCCGTAGCCACACCACTAC
AGCTCC------ACACGGGTGCGATGGAACCAGCCAACAACTCAATGAGCAGGAGCAGCGCGGTTGCTGCGGTTTGCTCG
AACTCCGACTGACGGCATGACGGCGTGCGTGGACCTCGGTGTAGCGCCGACAGACGAGTATGGCAGGCCATTGAGGCCGA
GCACCTCCCCCTAAGCTACTTGCCATCCTACATTTGTCTCAGCTTTGACGAACTATAGAATGGACTGATTTCCAACTAAT
GCCACTCATGCATGATATGATCGGACAAGTG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS--------------S----S-------------------------------------
---SS-S-S----S-SS--------S---S---------SSSS----S--------------------------S--S-S
S-SS---------------------S---------------------------------------------------S--
-------SS---S----SS--SSSSSSSSSSSSSSSSSSSSSSSSSSS------S----S------S----S--SSSSS-
SS-------S----S---------------------------S---S----S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-S-S-------------------
-----S--------------------------------------------------------------S-----------
-------------------------------------------S------------------------------------
--------S----------------------S------------------------S---S------------------S
---S-----------S-----------------S--------S-----SS-------------------S--SS-----S
---S----S-S---------------------SSS---S------SS-------S-------------------------
--------------------------------------------------------------------------------
-------SSS-----------S----S----------SS-----S--SSSSSS-S---S--SS-------------S--S
-SS--S-S--SSSSSSS---------------------------------------------S-----------------
----SSS------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-SS--S-----------------------
------------------------------------------S-----S-------S----S----------S---S---
-----S--------------------------------------------------S---------S-------------
----------SSSSS-SSS-SSS--SSSSSSS-----------------S---------SS----S--S-----------
-S---S-------------------------S------------------------------------------------
-S-------------------------------------------------------S----S------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS--------S---------------S------------S-S--------SS---------------S-------S----
-------------S---------S-S-----SS---S------S-----------------------------------S
----SSSS-SSS-SSSS-SSSSS-SS-S--SSSSSSSSSSSSSSS-SS---SSS-S--SS-S---SSSSSSSSSSSSS--
SSSSSSSSSSSS-SS--SS-SSSSSSSSS-SS--SSSSSS----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-----S---------------------------S---------------S------------
----------------------------------S---S-----------------------------------------
------SSSSSS------------------S---------------------S------S--------------------
-----S--------S--------------------------------------------------------S--------
------------------------S------------------------------S--S---------------------
-------------------------------
>forward_600
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GAGACCTCATCCGAGCCATG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>reverse_2969
--------------------------------------------------------------------------------
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--------GGCCTAGGGAATCGATTGGG----------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------
