>input_sequence_68181
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------------------------------------------------------ATGTATCCCACCACCCCCTCCGACGC
GTACGACAGGTTCAGCAACGGCCCTCCGCCCACGGCGCCGCCGCCGCAGCAGCAGCCCACGTACAACCACGCCATGAACC
AGAGCCACCACGCCCGCCCCGCCGCCGGGCTGGCGCGCTGGTCCACCGGCCTCTTCCACTGCATGGACGACCCGGGAAAC
TGTAAGCGGTCTCTGTCTTTCTTTCTTCCAGTAATCGGTCGGTTCCCCTCTTGCTCAG--------------------AG
CCGAGAGCTACTAGATAGC-----------TAGCAATGGTCGCCCATGGCCGCTCAGTTGAGCTTATCCATGTCTTTCGT
GAAGGTCTCATCACGTGCCTGTGCCCCTGCATCACGTTCGGGCAGATCGCGGACATCGTGGACAGAGGAACCTGTTGTGA
GTTCTTTCTCCCTCCCCTCCCCCCATT-----------------------------------------------------
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-----------------------------------------------------------------TATTCAGCTTCTTCT
TC---TTCTTCTTCTAGCTCGGTAGATCCACCGGCTATGTTTGACATATGAGAGATTGGCTTGCTGATGCAGCGTGCGCC
GGGAGCGGGGCGGCCTACGCGGCCATCTGCGCGACGACGGGGATGGGGTGCCTCTACTCGTGCGTCTACCGCACCAAGAT
GCGGGCGCACTACGACCTGGACGAGGGGGAGTGCCCGGACTTCCTCGTGCATTGGTGCTGCGAGCTCTGCGCGCTCTGCC
AGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACATGGGGATCGGCTGGGACGCCAACATGGAGCGCCGGAACCGGGGC
GTCACCGGAGGGCAGGTCATGGGGGCGCCGGCCACGCCCGTCGGCATGATGAGATAG-----------------------
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>chr6B_1_TraesCS6B01G351700
GATTGCCAATTTTATCATCCTATATAAACTATATAACACAAAAAATATACCTTTTAAAAATAGAACATCTGAAATTTATA
TTAATATATTTTTTGTAATATATAACTTGTATTAGGTTGGTCAAATTGATGATCTAGGATACGCACACGCCCTGTAAATT
AAGAGAGAGTACAATATTGATGATTATTTAAGCTCCCTAGGTTTCGCATGTGGCCGATCAAGGGAGCTGTCTTCGAGACA
AGTAGCGCA-AACCAATGGCAAAAACTACTATATCCACCTTGCATATTCCAAAACTTTGCTGTCACCTCGTCTGGTTAGA
CTTCAA-TAGT-TTGAAACCTAACCACTTTTATTATGTTTAACGGCAGTTAGCCCCCTTGAACAGCAACTTTTGTTGCAT
GGTTCGTCGACAAGTTGGCAGTATGGATAGGAAACTGCAAAAGTATATTGAAAGCAAGACCAAGACTCACTTTTCTCCAT
TTTCTTTATCTGCGAGTTGGCTAGCAAGACCAAGACTTCGGTAGTAGTATGATCTTTACACTGTGCATATATGATAATGA
TGCTCAGCAAGCACTAGTTGTGTTCTTCCCCGGAAATTAGG-----GAGTATTACTTGTTAAGTTAG-------------
---------TTCAATGAAACTTAGGAAATAGTACATCCACATCTTTTTT-GCAATCATTCAAGACACAAGAGCATGGACA
AAA-TGCACAGTGCACGCA--------GCAGTAGCGTCTTCTGCTTGCTCCAAGCGTAGCACGAAGCATCCAAGATATTT
ACTCACAGTGCTGCACTATTTCGCATCGCATCACCGTCAACACTGGAATACTGG-----TCACATACCAACTGATTTTTT
AAACATGTT------TTTGAATAAGAGAT-GCCAACTGATTGTTACAAAAACAATGAGG---------------------
--------------------AAAAGACTTGCGAGTTGCGAGAGGCTCGTTAGTGATTCCTTTTTAAAGAGGAACCTGGTC
CTTTCTTTGGCTTTAGCACAGG-CATAAACAGGGCACGGCTGTATTCCCAAGCAATGTATCCCACCACCCCCTCCGACGC
GTACGACAGGTTCAGCAACGGCCCTCCGCCCACGGCGCCGCCGCCGCAGCAGCAGCCCACGTACAACCACGCCATGAACC
AGAGCCACCACGCCCGCCCCGCCGCCGGGCTGGCGCGCTGGTCCACCGGCCTCTTCCACTGCATGGACGACCCGGGAAAC
TGTAAGCGGTCTCTGTCTTTCTTTCTTCCAGTAATCGGTCGGTTCCCCTCTTGCTCAG--------------------AG
CCGAGAGCTACTAGATAGC-----------TAGCAATGGTCGCCCATGGCCGCTCAGTTGAGCTTATCCATGTCTTTCGT
GAAGGTCTCATCACGTGCCTGTGCCCCTGCATCACGTTCGGGCAGATCGCGGACATCGTGGACAGAGGAACCTGTTGTGA
GTTCTTTCTCCCTCCCCTCCCCCCATT-----------------------------------------------------
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-----------------------------------------------------------------TATTCAGCTTCTTCT
TC---TTCTTCTTCTAGCTCGGTAGATCCACCGGCTATGTTTGACATATGAGAGATTGGCTTGCTGATGCAGCGTGCGCC
GGGAGCGGGGCGGCCTACGCGGCCATCTGCGCGACGACGGGGATGGGGTGCCTCTACTCGTGCGTCTACCGCACCAAGAT
GCGGGCGCACTACGACCTGGACGAGGGGGAGTGCCCGGACTTCCTCGTGCATTGGTGCTGCGAGCTCTGCGCGCTCTGCC
AGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACATGGGGATCGGCTGGGACGCCAACATGGAGCGCCGGAACCGGGGC
GTCACCGGAGGGCAGGTCATGGGGGCGCCGGCCACGCCCGTCGGCATGATGAGATAGGCAGGCCACGGCCGCGAAATCTC
CGGTGATTTTCATGCGTCATGCTC--CTCCCATCCCCTGTG-CCATTTCTCCTTGTGTTATTCTGGTTTGGAGATCGTTC
GAT--------TGACTGTTTTTCTAGTAGCGTGCGCATTGTCTACTACTAGTTTGCTTGATGTGCCGAATTCTGTTGATT
CTATGTAAAAATTTGTGGCGTGTTCGGCGTGTTCACGACTTATGCAAGCGGTGATGGATTTGATGATTGCTCCAGATGTA
GGTAAACAACATACGCCAGAGATATTAC-CCCCATTTCCTTTCCTCTTGCGTGTTGAGACGACCTCCCGTACAAAAGTCT
TATTGACTACAAATGCAAC-------------------------------------------------------------
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----------------------------------------GTCAATGCTAAAGTTTTTCTTTTAGCGAAACACCGAGCAC
AATAGAGAGGCACCGACACGTACGCCACCACCGCACAGAAAGCTAGGTGAGCTTAACCCCGCTGTATCAGAGGTGCTCTA
ATGTTCAATTACTTGCGCCCAAAATGGCTGAAGACTGCTGCTCAAGTCTACCAGCGCAAAACCCATTCCAAGTCTTAAAA
GCATCTCCAACAGGCGCCGAACGCGCCGCGCGCTAAAAACTGATTTGGCACGCGCCCATCGTCTGGTTTGGCGCGGCGCG
TAGCGTTTGCTCCAGGAGCCGCGCTGTAAAGCCGCGCGCGTGCAGTTCCAGCAGGCGCGGTAAAAATGCAGCGCACGCGC
TCATTCTATAAACATTTTTTTGCATAGATAAAAAAAATGATACAAGATATTTTACATAGATAGATAGATAGTTCGACATA
CATAAATAGATAGATACTACTATGGCATAGATAGATAGATAGAAGCTACTATGGCATACAGCGATAGAAACTACTCCAAG
TCGCTACCATCACCATCATCCTCGTCGGTGTCGTCCGAGATTGAGATCCATATGTCGTCCCAACGTTCGTCGTCCGCGGT
GAAGAACGACCTCCCACCTGCTGAAACTATGTCGCACTGCTCGTTCGCCA
>chr6D_170
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---------TACAATATTGATGATTATTTAAGCTCCCTAGGTTTCGCATGTGGCGGATCAAGGGAGCTGTCTTCGAGACA
AGTAGCGCAAAACCAATGGCAAAAACTACTATATCCACCTTGCATATTCCAAAACTTTGCTGTCACCTCGTCTGGCTAGA
CCTGAA-TAGTTTTGAAACCTAACCACTTTTATTATGTTTAACGGCGGTTAG-CCCCTTGAACAGCAACTTTTGTTGCAT
GGTTCGTGGACAAGTTGGCAGTATGGATAGGAAACTGCAAAAGTATATTGAAAGCAAGACCAAGACTCACTTTTCTCCTT
TTACTTTATCTGCGAGTCGGCTAGCAAGACCAAGACTTC---AGTAGTATGATCTTTACACTGTACTATCTGAA------
------------------TGTGTTCTTCCCACTAAGAAGAAAGCACGAGTATTACTTATGTCCAAGACACAAGGGCATGG
CGACTCAAAGGAAAAAAAA-----------------------------------------AAGACACAAGAGCATGGACA
GAGCTGCACAGTGCACACA--------ACAGTGGCATCTTTTGCTTCCTCCAAATGT---ACGAAGCATCCAAGATATTT
ACTCACAGTGGTGCACTATTTTGCTACGT---------GACACTGGAAGACTGG-----TCGGGTACCAACTGATTGTTA
CTTTTTTGAAT---------ATAAGAGAT-ACCAACTGGTTGTTACAAAGATATATTGGATAAATTGAGGTAAAAGAAAG
ATGTAATGGAGAAAAAATAATAAAGAAAA--GACTTGCGGGAGACTCGCTAGTGATTCC-TTTTAAAGAGGAACCCGGTC
CTTTCTTTGGCTTTAGCACAGG-CATAAACATAGCTCGTCCTTGCTCCCAAGCAATGTATCCCACCACCCCCTCCGACGC
GTACGACAGGTTCAGCAACGGACCTCCGCCCACGGCGCCGCCGCCGCAGCAGCAGCCCACGTACAACCACGCCATGAACC
AGAGCCACCACGCCCGCCCCGCCGCCGGGCTGGCGCGCTGGTCCACCGGCCTCTTCCACTGCATGGACGACCCCGGAAAC
TGTAAGTGGCCTCT---------------------------GTTCCCCTCTTGCTCAGTTCAGAGTTTCAGACTTCAGAG
CCGAGAGCTAGAGTGCTAGATAGTTCTTAGTAGCAATGGTCGCCCATGGCCGCTCAGTTGAGTTTATCCGTGTCTTTCGT
GAAGGTCTCATCACCTGCCTGTGCCCCTGCATCACGTTCGGGCAGATCGCTGACATCGTGGACAGAGGAACCTGCTGTGA
GTTCTTTCTTCCTCTCCTCCCCCCATT-----------------------------------------------------
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-----------------------------------------------------------------TATTCAGCTTCTTCT
TCTTCTTCTTCTTCTAGCTCGGTAGATCCACCGGCTATGTTTGACGTATGAGAGATTGGCTTGCTGGTGCAGCGTGCGCC
GGGAGCGGGGCGGCCTACGCGGCCATCTGCGCGACGACGGGGATGGGGTGCCTCTACTCGTGCGTCTACCGCACCAAGAT
GCGGGCGCACTACGACCTGGACGAGGGGGAGTGCCCGGACTTCCTCGTGCATTGGTGCTGCGAGCTCTGCGCGCTCTGCC
AGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACATGGGGATCGGCTGGGACGCCAACATGGAGCGCCGGAACCGGGGC
GTCACCGGCGGGCAGGTCATGGGGGCGCCGGCCACGCCCGTCGGCATGATGAGGTAAATAGGTGACGCCCGCGAAATCTC
CGGTGATTTTCACGCGTCATGCTCCCCTCCCATCCCCTGTG-CCATTTCTCCTTGTGTTGTTCTGGCTTGGAGATCGTTC
GATACTTCGATTGACTGTTTTTCTAGCGGCGTGTGTATTGTCTACTA---GTTTGCTTGATGTACCGAATTCTGTTGATT
CTATGTAAAAATTTGT---------GGCGTGTTCACGACTTATGCAAGCGGTGATGTATTTGATGATTGCTCTAGAAGTA
GATAAACAACCTAAGGTGATTTTTTTAAACCGCATTTCCTTTCCTCTTACCTGTCGAGACGACCTCTTGTGCAAAGGTCT
TATTGACTACACTAGCAATGTGCCCATGTGTTGCAATGGATCCAAAATAGAATAATACATGTTCACAAACTTGAAAGAAA
AACACTCTAGTTTGGCGTATATATCACTAAAAATATACTCGTATTAGGTTTCACTCAAAATATATTCCTTGTGGCTGTTT
GGATGAGGTGGCGTATATATCACTAAAAATATACTCGTATTAGGTTTCACTCAAAATATATTTCTTGTGGCTGTTTGGAT
GAGGTGGGGGAGGGATGTGGTTGATTGGTTTCAAGATACTAAGGGGTTTCTGCAAAATGACGAATGATAGACGCACCATC
ATCATCAACTGAGTCTTTTATAGGAGTAGAGAAATGCAATGTCAATGCTAAAGTTTTTCTTTTAGCGAAACACCGAGCCC
AATAGAGAGGCACGCAAATGTGCGCCACCACCGCGCAGAAGGCTAGTTGAGCTTAACCCCGGTGTATTAGAGGTGCTCTA
GTGGTCAATTGCTTGTGCCCGAAATGGCTGAAGCCTACTGCTGAACTCTACCAGCGCAAAACCCATTCCAAGTCTTAA--
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>chr6A_182
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---------------------GATTATTTAAGCTCCCTATGTTTCGCATGTGGCGGATCAAGGGAGCTGTCTTCGAGACA
AGTAGCGC-AAACCAATGGCAAAAACTACTATATCCACCTTGCATATTCCAAAACTTTGCTGTCACCTCGTCTGGTTAGA
CTTCAAGTAGTTTTGAAACCTAACCACTTTTATTATGTTTAACGGCGGTTAGCCCCCTTGAACAGCAACTTTTGTTGCAT
GGTTCGTCGACAAGTTGGCAGTATGGATAGGAAACTGCAAAAGTATATTGAAAGCAAGACCAAGACTCACTTTTCTCCTT
TTTCTTTATTAACGAGTTGGCTAGCAAGACCAAGACTTC---AGTAGTATGATCTTTACACCGTGAATATATGACAATGA
TGCTCGGCGAGCACTATTTGTGTTCTTCCCCGAAAATTACACCCTCCGTTTCATAATATAAGAACGTTTTCGACATTAAT
ACTTTTAAATTCAATAAAACTTAGGAAATA-TACACCCACATCTTTTCCGGCAATCATTCAAGACACAAGAGCATGGACA
AAA-TGCACAGTGCACACAGCAGTACTGCAGTAGCGTCTTCTGCTTGCTCCAAGCGTAGCAGGAAGCATCCAAGATATTT
ACTCACTGTGCTGCT-------------------CGTGGACACTAGAATACTGGTCACATCACATACCAACTGATTTTTT
AGATATTATTACTACTTTGAATAAGAGATTACCAACTGACTGATAGAAAAGTATAGCAC---------------------
--------------------TAAAGAAAA--GACTCGGGAGAGACTCGCTAGTGATTCC-TTTTAAAGAGGAACCGGGTC
CTTTCTTTGGCTTTAGCACAGGGCATAAACAGGGCACGGCCGTATTCCCAAGCAATGTATCCCACCACCCCCTCCGACGC
GTACGACAGGTTCAGCAGCGGGCCTCCGCCCACGGCGCCGCCGCCGCAGCAGCAGCCCACGTACAACCACGCCATGAACC
AGAGCCACCACGCCCGCCCCGCCGCCGGGCTGGCGCGCTGGTCCACCGGCCTCTTCCACTGCATGGACGACCCCGGGAAC
TGTAAGTGCTCTCC---------------------------GTTCCCCTCTTGTTCAG--------------------AG
CGGAGAACTACTAGATAGC-----------TAGCAATGGTCGCCCATGGCCGGTCAGTTGAGCTTATCCGTGTCTCTCGT
GAAGGTCTCATCACCTGCCTGTGCCCCTGCATCACGTTCGGGCAGATCGCGGACATCGTGGACAGAGGAACCTGCTGTGA
GTCCTTTCTTCCTCTCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTCAGCTTCTTCT
TCTTCT---------AGCTCGGTAGATCCGCCGGCTATGTTTGACGTATGAGGGATTGGGTTGCTGGTGCAGCGTGCGCC
GGGAGCGGGGCGGCCTACGCGGCCATCTGCGCGACGACGGGGATGGGGTGCCTCTACTCGTGCGTCTACCGCACCAAGAT
GCGGGCGCACTACGACCTGGACGAGGGGGAGTGCCCGGACTTCCTCGTCCATTGGTGCTGCGAGCTCTGCGCGCTCTGCC
AGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACATGGGGATCGGCTGGGACGCCAACATGGAGCGCCGGAACCGGGGC
GTCACCGGCGGCCAGGTCATGGGGGCGCCGGCCACGCCCGTCGGCATGATGAGGTAGACAGGCCACGCCCGCGAAATCTC
CGGTGATTTTCATGCGTCATGCTC--CTCCCATCCCCTCCTCCCATTTCTCCTTGTGTTA--------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS---------------------------------------------S-------------------------
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----------------------------------------------S---------------------------------
------------------------------------------------------------------------------S-
---------------------------------------SSS--------------------------------S-----
-----S--S-------S---------------S------SS----------------S-S-SSSSSS-------------
---------------S--------------S----S-----------SS-------------------------------
----------------S---------------------------------------------------------------
---------------------S--SS--SSSSSS---SS-----------------------------------------
-S-S--SS----------------------S--------------------S-SS-S-----------------------
--------------------S-----SSSSS--S---------S----S----------S---------------S----
----------------------------------------S---------------------------------------
---------------------S----------------------------------------------------------
-------------------------------------------------------------------------S------
------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------
---------------------------------------------------------------------S----------
--------------S-----------------------------------------------------------S-----
---------S----S-----------------------------------------------------------------
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---------------------------------------------S--------------------S-------------
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--------S--------------------------------------------S---S---------S------------
------------------------------------------------------------------S-------------
--------------------------SS-----S-S-----------SSS-------------S----------------
----------------SSSSSSSSS-------------------------------S---------------S---S---
-S--------S--S-SSSSSSS-S---S---S----------------S-S---S-----------SS--S----S----
-----------SSS----S-------------------------------------------------------------
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------------------------------------------------------------------------------S-
-------------SS-S-S--S------------S-----S-----S--------------S-----S------------
S--S------S----S----S------------S--S-----S--S--------------------------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_158
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----------------------------------------------------------ATACGCACACGCCCTGTAAA--
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>reverse_2667
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--------------------------TAGCGTGCGCATTGTCTACT----------------------------------
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