>input_sequence_68086
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-----------------------------------------------------------------ATGTCTGTGGTTAGG
TTACAAGGCGGCAGTCCAGAGCATTTGGGCAGTGGTTTCGTTGCTTACTGCAACGGATGTTCATGTCTAGTAATGACATC
TTACCATGTTGTTAAATCAGCCTTCATTAATGGTCTTATGATTACGGTTATCTTTCCTGGTGGACAACCGCGCTTTCAAG
CCGATGTACAAAATTTATCCGAGCCTGGGGATCTTGCTATACTTCAGTTTGATTGTGAGGGCTATATGTTTGAACCTCTG
CTGTTCGCTGAAATATCTACCAATCCTGATTTATTTCCATGGACGGTTTATTTGCATGGATATTACAATGGTAAACGTGG
ACAACTTATCAGACCTTCGACATTACCTGGCCAAATTGAGTACGTAATGACGGTTAAATCTTACTTTTTGTGCATTTGCT
GACTAATTTTTATTTGAACTGTGTTTTTTTTTGTGGTGGTTAAAATACATATTTGCTGGAACTAATTTGTTTGTATCTCA
GCGGTATGTACGTAAATCAAGAAACTGGTGTTCATATGCTTTATGCAAATTACACCAGTAACCCTGGAATGTCTGGTGGA
CCAATTATTATGGGAGGTAGAGTC-TTGGAGTCAACAAAGGGGCTGAGGCAGGAACGAGACTTGCTGTTTCAGTCCTGGG
TGTAC--ACCATGCTAGAGGATTGGACTGTAAGAGTTCCAGACTTCGTTTTTGTTGTTTTCTAAACTGTCTATAGGCAAT
TTTTAATCATGTGTAGTATTTGTCAGGGCGGAGCAGAAACAATTGCTGAGATGCTTGAAATGCTTGAAGAGCTTGACTAT
TAA-----------------------------------------------------------------------------
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>chr7B_1_TraesCS7B01G331200
TTTTCCATTTGGGGATTTTCATGCAAGGGTTAGTGTTGGGCATTTCTAAGGTTATTAGGGTTTCGGTGATTTGGGG-AAA
TTGGATAGTTCTTAAACAAACATCCACCATATTCTTCTAATTGCTACCCGATGCAGTATTGTCCTTATTAAACACCAATT
TAACTTGAACCATCAACATTATCACATTAACCGTAGCTAATTAAAACATGGTCATCATTAATTAGCACTAACCCGATGCA
ATTAGGATAAGACGAGATCATTAGTTCACTAGTAAGGTCGTTAACCTGAAAGATCATTAACCTTGAAC------------
---------ATGGATAATTAAGACTTACAAAACCATTGACATGTTAGCATGGATGATT---AACAACCGAGGCATGTAAA
TACGATCTTGATCTCAGATTAGAACGTCCCAAACAAAAGCATTAGATGTCCCTTGCTGCCCGACAGTGAGCCCCCAGCCA
TATGTGAAGTTCCGACAGGGGAGAGGCAACAGTGGGGGTCCTAGTGGTGCAGGACGCCACAGGCACTGTCCCAGGATGGC
CAGTGGTGGTAATCAGTCTTGGAATCCCCATGGCACCTTTTTAGGATCAGTTGTTATTGGTGGAACCTGCCCCTCCTTTT
CCTTAATTACTAGGCGCTGGGACATGGGCAGGGAGTTGTTGGATCGGTGCCCCTGATCAGGGCGCACACGTGGGAGCTGA
GCTCTGCCTTTTCTCTTGGCTTATTTGGACAGATGTCAATTCCAATACCTGTGACTCAAAACAGGCGAGTTACTCCCGCA
ATGCGCATGCCTCCTCTGTTGTGTTACTTGTTGGCTGATTCCCTTATTCACATTTTCTTTAATCTTAGTGAAGCGTAGTA
TTTAATTGTTTTCCCCGAATGAAGTATGGATACTCGTCTAATTTGTCTTTCCATCTTAGGATGTTTGGTCCTATCTGACA
ACCTTTATTTCCACTGAAACTTTTGCAGTTTCATCTTTAAATCTTGAGTTCATCAACTGAAGGAGATGTCTGTGGTTAGG
TTACAAGGCGGCAGTCCAGAGCATTTGGGCAGTGGTTTCGTTGCTTACTGCAACGGATGTTCATGTCTAGTAATGACATC
TTACCATGTTGTTAAATCAGCCTTCATTAATGGTCTTATGATTACGGTTATCTTTCCTGGTGGACAACCGCGCTTTCAAG
CCGATGTACAAAATTTATCCGAGCCTGGGGATCTTGCTATACTTCAGTTTGATTGTGAGGGCTATATGTTTGAACCTCTG
CTGTTCGCTGAAATATCTACCAATCCTGATTTATTTCCATGGACGGTTTATTTGCATGGATATTACAATGGTAAACGTGG
ACAACTTATCAGACCTTCGACATTACCTGGCCAAATTGAGTACGTAATGACGGTTAAATCTTACTTTTTGTGCATTTGCT
GACTAATTTTTATTTGAACTGTGTTTTTTTTTGTGGTGGTTAAAATACATATTTGCTGGAACTAATTTGTTTGTATCTCA
GCGGTATGTACGTAAATCAAGAAACTGGTGTTCATATGCTTTATGCAAATTACACCAGTAACCCTGGAATGTCTGGTGGA
CCAATTATTATGGGAGGTAGAGTC-TTGGAGTCAACAAAGGGGCTGAGGCAGGAACGAGACTTGCTGTTTCAGTCCTGGG
TGTAC--ACCATGCTAGAGGATTGGACTGTAAGAGTTCCAGACTTCGTTTTTGTTGTTTTCTAAACTGTCTATAGGCAAT
TTTTAATCATGTGTAGTATTTGTCAGGGCGGAGCAGAAACAATTGCTGAGATGCTTGAAATGCTTGAAGAGCTTGACTAT
TAAAATAATCAATCTTGCAGCACCAAGTATTAAAGGTACTTCCTCCATTTTAATATATTTTTCATCAGTCAATCATCAAT
CACTATGTCCAATTCACTCCATTTCTTAACTTTTCTTGCATATCCAATTGTGTCCTTCATTGAGTTTATTTTCTTAAAAT
TCGAACTTGCTATATCTAAACAAAAACTGTGGGCGTGCTATCTCAATTAGTATGTGTGTATGCCAACAGTAGAAATTTCT
TTTCTTAGATCATCACACGTACTGTACCAGTCTTGTATGCTTTGGAAGGAATTATATATCCTTCCTCACATTCACATCGA
CATTTAAACTTCTATGGCTGCTAATCAGTCACAAACATAACTTCACCACTCATTCAATCCTACCTGTAGAATGTTAATTC
TATGGTTA-TTTATGTACCTTGATATAATTAGCATGGAG-----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AGATAATTGAGTTTGT
GAGTTCATAGTCGACCGCACTTTATGTTTGTGGTGTTTGAGGTCATAAATGTGTCTTTTGATGCTTGGTCTATATTTGTA
TTACTCTTATCATGTGTTCCTCACACTTTTTTTT-GTCAATTCTGAAGCCTTCAATGAAGTATCAGTTACTTGGAGTGAA
TGTTTGA---TACGCTGCTGGAGCCTCAGGGTGGAGTGAAAGATGGTTTATTGCTTCCATACATTAAGCCGTCGTTTATT
TTGGAAGTTGTCTGAGTGCGATGTGTAATTTGTATCTCTATACGGTTGTTATTTAAGTTATTCTTGTCCGAGTGACTACA
TCAGACTATCAAGGATTGTTATTTGTTATGTACCAATGTGGAGTCACATAGGTTATTTGTGCCTGTAGAGTAAGAATTAT
ATTAATGTGATGGACTCCTGTCTA-TAAGATTCGTAATGCTTGTTGGTGTATTTTTCTTTATATACCGTGAAATACTTAC
TGAAAAATGCAACTGCTGATATGTCTTGCTGACACCCAGATAGAAACGTCTGCGGTTAGGCTTTGGCCCATGCT
>chr7D_1
TTTTCCTTTTGGGGATTTTCATGCAAGGGTTAGTGTTGGGCATTTCTAAGG---TTAGGGTTTCGGTGATTTGGGGGAAA
TTGGATAGTTCTTAAACAAACATCCACCATATTCTTCTAATTGCTACCCGATGCCGTATCGTCCTTATTGAACACCAATT
TAACTTGAACCATGAACATTATCACATTAACCGTAGCTAATTAAAACATGGTCATCATTAATTAGCACTAACCCGATGCA
ATTAGGATAAGACGAGATCACTAGTTCACTAGTAAGGTCATTAACCTGAAAGATCATTAACTTAAAACAGAGAGCAATCT
ACCTTGAAAATGGATAATTAAGACTTACAGAACCATTGACATGTTAGCACGGGTGATTAACAACAACCGAGGCATGTAAA
TAGGATCTTGATCTCAGATTAGAACGTCCCAAACAAAAGCAGTAGATGTCCCTTGCTGCCCGACAGTGAGCCCCCAGCCA
TATGTGAAGTTCTGACAGGGAAGAGGCAACAGTGGGGGTCC--------CAGGACGCCACCGGCACTGTCCTAGGATGGC
CAGTGGTGGTAATCAGTCTTGGAATCCCCATGGCACCTTTTTAGGATCAGTTGTTATTGGTGGAACCTGCCTCTCCTTTT
CCTTGATTACTAGGCGCTGGGACATGGGCAGGGAGTTGTTGCATTGGTGCCCCTGATCAGGGCGCACACGTGGGAGCTGA
GCTCTGCCTTTTCTCTTGGCTTACTTGGACAGATGTCAATTCCAATACCTGTGACTCAAAACAGGCGAGTTACTCCCGCA
ATGCACATGCCTCCTCTGTTGTGTTACTTGTTGGTTGATTCCCTTATTCACATTTTCTTTAATCTTAGTGAAGCGTAGTA
TTTAATTGTTTTCCCCAAATGAAGTATGGATACTCGTCTAATTAGTCTTTCCATCTTAGGATGTTTCGTCCTATCTGACA
ACCTTTATTTCCACTGAAACTTTTGCAGTTTCATCTTTAAATCTTGAGTTCATCAACTGAAGGAGATGTCTGTGGTTATG
TTACAAGGCGGCAGTCCAGAGCATTTGGGCAGCGGTTTCGTTGCTTACTGCAACGGATGTTCATGTCTAGTAATGACATC
TTACCATGTTGTTGAATCAGCCTTCACTAATGGCCTTATGGTTACGGTTATCTTTCCTGGTGGACAACCGCGCTTTCAAG
CCGATGTACAAAATTTATCCGAGCCTGGGGACCTTGCCATACTTCAGTTTAATTGTGAGGGCCATATGTTTGAACCTCTG
CTGTTTGCTGAAATATCTACCAATCGTGATTTATTTCCATGGACGGTTTATTTGCATGGATATTACAATGGTAAACGTGG
ACAACTTATCAGACCTTCGACATTACCTGGCCAAATTGAGTACGTAATGACGGTTGAATCTTACTTTTTGTGCATTTGCT
GACTAATTTTTATTTGAACTGTGTTTTTTTTGGTGGTGGTTAAAATACATATTTGCTGGAACTGATTTGTTTGTATCTCA
GCGGTATGTACGTAAATCAAGAAACTGGTGTTCATATGCTTTATGCGAATTACACCAGTAACCCTGGAATGTCTGGTGGA
CCAATTATTATGGGAGGTAGAGTTGTTGGAGTCAACAAAGGGTCCGAGGCAGGAACGAGACTTGCTGTTTCAGTCCTGGG
TGTACACACCATGCTAGAGGATTGGGCTGTAAGAGTTCCAGACTTTGTTTTCGTTGTTTTC---ACTGTCTATAGGCAAT
TTTTAATCATGTGTAGTATTTGTCAGGGCGGAGCAGAAACAATTGCTGAGATGCTTGAAATGCTTGAAAGGCCTGGCTAT
TAAAATAATCAATCTTGCAACACCAAGTATTAAAGGTACTTCCTCCATTTTACTATATTTTTCATCAGTCAATCATCAAT
CACTATGTCCAATTCACTCCATTTGTTAAATTTTCTTGCATATCCAATTGTGTCCTTCATTGAGTTTATTTTCTTACAAT
TCAGACTTGCTATATCTAAACAAAAACTGTGGGTGTGCTATCTCAATTAGTATGTGTGTATGCCAATAGTACAAATTTCT
TTTCTTAGGTCATCACACGTACTGTACCAATCTTGTATGCTTTGGAAGGAATTATATATCCTTCCTCACATTCACATCGA
CATTTAAACTTCTATGGCTGCTAATCAGTCACAAACATAACTTCACCGCTCATTCAATCCTACCTGTAGAATGTTAATTC
TATGGTTAATTTGTGTACCTTTATATAATTAGCATGGATATTTGAATGAGGCCTCCTAGATTCGAAAGATAAGAGACAAC
AATAGCTAAGCTAAGATGAAACTTAGTTCGCCTGAAAGATTAGATAATTGTGAATAATAATTTTCCAGAGCGACTTCACA
GACAACAACTGGCAAGATAAGATTTGACGTAATATCACTGGGATTTTTTTTTGACATAATTGTCAGATAATTGAGTTTGT
GAGTTCATAGTCGATCGCACTTTATGTTTGTGGTGTTTGAGGTCATAAATGTGTCTTTTGACGC-----------TTGTA
TTACTCTTATCATGTGTTCCTCACACTTTTTTTTTGTCAATTCTGAAGCCTTGGATGAAATATCAGTTACTTGGAGTGCA
TGTTTGATACTACGCTGCTGGAGCCTCGGGGTGGAGTGAAAGATGGTTTATTGCTTCCGTACATTAAGCCGTCGTTTATT
TTGGAGGTTGTCTGAGTCCGATGTGTAATTTGTATCTTTATACGATTGTTATTTAAGTTATTCTTGTCCGAGTGATTACA
TCAGACTATCAAGGATTGTTATTTGTTATGTACCAATGTGGAGTCACATAGGTTATTTGTGCCTGTAGAGTCAGAATTAT
ATTAATGTGATGGACTCCTGTCTAATAAGATTCGTCATGCTTGTTGGTGTATTTTTCTTTAAATACCATGAAATACTTGC
TTAAAAATGCAACTGCTGATATGTCTTGCTGACACCCAGATAGAAATGTCTGCGGTTAGG-TTTGGCCAATGCT
>SNPs
------S--------------------------------------------SSS--------------------------
------------------------------------------------------S----S---------S----------
-------------S------------------------------------------------------------------
--------------------S------------------S---------------------S-SS---------------
-----------------------------S-------------------S--S---------------------------
--S--------------------------------------S--------------------------------------
------------S-------S--------------------SSSSSSSS-----------S----------S--------
-----------------------------------------------------------------------S--------
----S------------------------------------S--S-----------------------------------
-----------------------S--------------------------------------------------------
----S-----------------------------S---------------------------------------------
----------------S--------------------------S----------------------S-------------
------------------------------------------------------------------------------S-
--------------------------------S-----------------------------------------------
-------------S------------S------S------S---------------------------------------
-------------------------------S-----S------------S-----------S-----------------
-----S-------------------S------------------------------------------------------
-------------------------------------------------------S------------------------
-------------------------------S-------------------------------S----------------
----------------------------------------------S---------------------------------
-----------------------S------------------S-S-----------------------------------
-------------------------S-------------------S-----S---------SSS----------------
--------------------------------------------------------------------SS--S--S----
-------------------S--------------------------------S---------------------------
------------------------S----S----------------------------------------------S---
--SS-----------------------------S--------------------------------S----S--------
--------S--------------------S--------------------------------------------------
-----------------------------------------------S--------------------------------
------------S--------S----------------S-----------------------------------------
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--------------S----------------------------------------------S--SSSSSSSSSSS-----
----------------------------------------------------SS-----S------------------S-
---------------------------S------------------------------S---------------------
-----S-----------S-------------------S------S------------------------------S----
-----------------------------------------------------------------------S--------
-----------------------------------S-------------------------S-----S----------S-
-S--------------------------------------------S-------------S-------S-----
>forward_501
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-ATGTGAAGTTCCGACAGGGG-----------------------------------------------------------
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>reverse_1645
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--------------------------------------------TGAGGCAGGAACGAGACTTG----------------
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>forward_1073
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-------------GTCCAGAGCATTTGGGCAGT-----------------------------------------------
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>reverse_2726
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-----AGTTGTCTGAGTGCGATGTGT------------------------------------------------------
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