>input_sequence_68073
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------------------------------------------------------------------------------CC
GAGAAAGGAAAAAGATACGGAGAACAGAGGAAGAAACAAGAAATATATATCCATGTTGCAGCGAA------CGGCCTCGG
CGTCGGCCGCCATGGTGTCCGGCTACCGGCAGAGGGAAGCCGTGGGTGCGTGTACAGAGAGCCTCGGGTCGGAGAGCGGC
GACGTCGGCGGGGATATCGAGCAGCTCCCGGCCGTCGTCGGCGCCGGAGCAAACGAGGACGGGCACGGCGCGGGAATGGT
GGAGCATCAGGATTTGGCGGCGAAGAGGCGGCGAGGCGACAGGCTTCTCCCTCCGGTGATGCCGAGGCCGGCCGAGGCGT
TCATGCGCGCGGAGCGGCGTGGCGGGCGGCTCATCCTCACCCAGGTGGTGCGGCCGGTCGAGCGGCCGCGGGAGGTGTTC
TGTGCGTCCCGCGCCGACGGGCGCCTGCGCCTGCGCTTCGCTGAAGAAGACCGCTTGTACGGCGAGGAGCGCCAAGCGCC
CGAATCAGCCGAGACGGAGAGCGGGGCCCTGGTCGGTGGCTGCGGCAACGGCGTGGGGTTGCGCCAGGCGGCCACCGGCA
CCGGGAGGCGCGTCGAGATCGGCGCCGTGATGGGGATATGATCGAGGCCATGAGGTCGGCCGAGTCGTGCCTCGATTCGA
ATGCGGCCGCGTTGCTGCTGGAGTAGTACTCCTTCCTTTTTTAACTAAAACTACGACGAGTAATTTGAAACGGAGGTAGC
TAAGCTGCATTTTTGGATCTTCATTTTCTTGTTCTGTTTATTTCCGAGTGATTTTGCTTGATTGCGAAAGTAGGAGGTAG
ATGTAGTTTTCAGATCTTA-------------------------------------------------------------
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>chr4D_1_TraesCS4D01G148800
ATCAAATTTCATATATAACATGTTAAAATCGAAGTTACGGTTTAAAAGATACGTATAATTTAGAAAACCATTTGTTTGAC
TTAAATATCTTCCAAAATAATATTTATAAATACTTAACAGGTTAAAATAATCTTATATTCATATTCTTCATATTTTTCTA
ATCAAATTTCATATATAACATGTTTAAATCGGAGTTACAGTTTAAAAGATATGGATGGTTTAGAAAAGTATTTGTTTGAC
TTAAATATAATCCGCGGATGGAATACCTAAAAAGTTAAGGGTTTTTTTTTTAACTGTAAAATAACGGTTCGGTGTCACTT
AAATCCGGACTGTGGATTGATTTCATAAAAATGCAGGGGCTTTTTTGCAAAACTGTGTGACGGACGGACAAAAACCCTAC
ATACTTTATTATTAGGTAGAGATATGCACACTCGTGCATATTCAAGAAAAAAAAAACATCCACCACGGCACCTCACCACC
GTCCA-TCCAATCCACCACAACAGCTAACTAGAAACTCGTGCTGCC--------CTCGTTGCATTCCAGCTCTCCACCAG
CCACGAGCGAGCGCAAAACCAAAACGGCACT-------------------------------------------------
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---------------------CCCCCTGGCCTGCGGGTCCCACGTGTATCAGACCCCACGCGTCGGTGACTCTGCATCAG
GACGTACGTGGCATAGTTGTTCCTTCTCCTGCC-----------------------------------------------
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------------------------------------------------------GAGCTGGAACCCTGCACAACCAGATA
TACCTCGTCGTAGGGCTTATCTTCCACCGACAGGTGGGTCCTGGACCCCGTGTGTGT----------------GACTAGC
TGGTTGCGTGGAGGCTAGGGTAGCGTGGGCCCCGGTCAAGTGGCGGCGCCCACAGCTGTATCAAC--ACAACCAGCTTGG
CGGCGGTTGGTTGACACCACAGGCAACTGACAGGTGAACCTCGATAACTGTGGGCCAGCACGTCAGTTGGAGATCAGCTG
CCCACTTGCGGCGGTATTACTGTTGCGCCACCGCTCCGCGGTATATAACCCTCACACCATCTCTTCCGTCCATCCACACC
GAGAAAGGAAAAAGATACGGAGAACAGAGGAAGAAACAAGAAATATATATCCATGTTGCAGCGAA------CGGCCTCGG
CGTCGGCCGCCATGGTGTCCGGCTACCGGCAGAGGGAAGCCGTGGGTGCGTGTACAGAGAGCCTCGGGTCGGAGAGCGGC
GACGTCGGCGGGGATATCGAGCAGCTCCCGGCCGTCGTCGGCGCCGGAGCAAACGAGGACGGGCACGGCGCGGGAATGGT
GGAGCATCAGGATTTGGCGGCGAAGAGGCGGCGAGGCGACAGGCTTCTCCCTCCGGTGATGCCGAGGCCGGCCGAGGCGT
TCATGCGCGCGGAGCGGCGTGGCGGGCGGCTCATCCTCACCCAGGTGGTGCGGCCGGTCGAGCGGCCGCGGGAGGTGTTC
TGTGCGTCCCGCGCCGACGGGCGCCTGCGCCTGCGCTTCGCTGAAGAAGACCGCTTGTACGGCGAGGAGCGCCAAGCGCC
CGAATCAGCCGAGACGGAGAGCGGGGCCCTGGTCGGTGGCTGCGGCAACGGCGTGGGGTTGCGCCAGGCGGCCACCGGCA
CCGGGAGGCGCGTCGAGATCGGCGCCGTGATGGGGATATGATCGAGGCCATGAGGTCGGCCGAGTCGTGCCTCGATTCGA
ATGCGGCCGCGTTGCTGCTGGAGTAGTACTCCTTCCTTTTTTAACTAAAACTACGACGAGTAATTTGAAACGGAGGTAGC
TAAGCTGCATTTTTGGATCTTCATTTTCTTGTTCTGTTTATTTCCGAGTGATTTTGCTTGATTGCGAAAGTAGGAGGTAG
ATGTAGTTTTCAGATCTTATAGTTGTGCAGATTCAGATTTGTGGGAGAGTGATGATTGATTGTTTCTGTTAGTAATTAAT
CAATTAGATTAATTAATTGTAAATCCATGCTATGTCTGTGGTTATGTTTTGGCAACCGCCTCCTTTGTAACCGCCTTGTA
ATGAGGGTATTAATACCCCAATCTTCAATCAATGCAACAATTGTTCCATCATTTGCTCTCTCTCGTTTCTACTTTGACAC
GTTATCAGCCCTTTACCCTAAC-----CTGAGCAAGCGATTAGGCCACTAAACAAACCAGCAGCGCCGGCGGCTTCCGCG
CACTAATATCAGTTCGTCACCGGAGATGTCCTTGATGGCCGAGAGACAGCCGAACGAGTGCGAGCCCAGACCTCTTTGAC
GCATCGCGTTGTCCCCGGCGGAGCGATTTCACGAACGGCTCGCCGGCGAGCAACGCGGAACTGGCGACAGTCCAAGCCCA
CTGGCGCGTGGTGCGTGCACGCCTCCCCCTGCAGAACGGCACGACGGCGCAAGTCTCCAGCCGGCGCGTGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCCGAGGCATTCACGGCC------CAGGCGCGGCGAATCTCTCGATCTAGGAAGAAACCAGA
TGCAAATGAGATGAAAGCACAAAATCCAGAAAGAAAGGTA-------AGAACGGGGAGGGGATCAGAAGGAAACATACAA
GATCCCTGTAACACATCTCGTACAAAACGACAATCATACAAAGACCATCTC--TATCTTGATTGATACA-----------
--TCAATTCCAATTTCGTTCCTGCACGAAGTAAGCACTAAACCTCCAGGGCGTCGTTTGC-ATGCCGTCCAAGGCAAATT
TCGGCGGCGACCCATGGCCCGGACAACGCTG-CCTCGGCCAGGCTCCTAGCAGAGCGGCGGCATCCTTCGGCCCGGCTGC
TCCCATAGCTGCACCCGGAGGCGGCCGCAGCGGCCAACGGCCGGTGCCCGACATGGCAATGCCCTCAGGCGCGCGGCAGC
ACGGTCCACAGCCC
>chr4A_448
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-----------------------------------------------AAAAAAAAACATCCACCACGGCACCTCACCACC
GTCCCCTCCAATCCACCACAGCACCTAACTAGAAACTCGTGCTGCCCTCGTTGGCTCGTTGCATTCCAGCTCTCCACCAG
CCACGAGCTAGCGCAAAGCCAAAACGGCACT-------------------------------------------------
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---------------------CCCCCTGGCCTGCGGGTCCCACGTGTATCATACCCCACGCGTCGGTGACTCTGCATCAG
GACGTACAGGGCGT-GTTGTTCCTTCTCCTGCC-----------------------------------------------
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------------------------------------------------------AAGCTGGAACCCTACATGACCAGATA
TACCTCGTCGTAGGGCTTATCTTCCACCGACAGGTGGGTCTTGGACCGTGCGTGTGTGCAAAACGATGAGTACGACTAGC
TGGTTGCGTGGAGGCTAGGGTAGCGTGGGCCCCGGTCAAGTGGCGGCGCCCACAGCTGTATCAACTAACAACCAGCTTGG
CGGCGGTTGGTTGAAACCACAGGCAACTGACAGGTGAACCTCGACAACTGTGGGCCAGCACGTCAGTTGGAGATCAGCTG
CCCACTTGCGTAGGCTGCAGAGACCGTGGTAGTAC-----GTATATAACCCTCACACCATCTCTTCCGTCCATCCACACC
GAGAAAGGAAAAAGATACGGAGAACAGAGGAAGAAACAAGAAATATATATCCATGTTGCAGCGAA------CGGCGTCGG
C------CGCCATGGTGTCCGGCTACCGGCAGAGGGAAGCCGTGGGTGCGTGCACAGAGAGCCTCGGGTCGGAGAGCGGC
GACGTCGGCGGGGATATCGAGCAGCTCCCGGCCGTCATCGGCGCCGGAGCGGACCAGGACGGGCACGGCGCGGGAATGGT
GGAGCATAAGGATTTGGCGGGGAAGAGGCGGCGAGGCAACAGGCGCCTCCCTCCGGCTATGCCAAGGCCGGCCGAGGCGT
TCATGCGCGCGGAGCGGCGTGGCGGGCGGCTCATCCTCACCCGGGTGGTGCGGTCGGTCGAACGGCCGCGGGAGGTGTTC
TGTGCGTCCCGCGCCCACGGGCGCCTGCGCATGCGCTTCGCTGAAGAAGACCCCTTGTACGGTGAGGAGCGCCAAGCGCC
CGAAGCAGCCGAGAAGGAGAGTCGGGCCCTGGTCGGTGGCTGCGGCAACGGGGTGGGGTTTCGCCAGGCGGCCACCGGCA
CCGGGAGGCGCGTCGAGATCGGCGCCGTGATGGGGATATGATCGAGGCCCTGAGGTCGGTCGACTTGTGCCTCGATTCGA
GTGCGGCCGCGATGCTGCTGGAG---------------------------------------------------------
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>chr3B_458
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---------------------------------------------------------ATCCACCACAGCACCTCACCGCC
GTCCA-TCCAATCCAGCACATCACCTAACTAGAAACCCGAGCTGCCCTCTTTGGCTCGTTGCATTCCAACTCTCCACCAG
CCACGAGCGAGCGCAAAAACAAAGGGCGGCTGATAGGCGCCGGTCGACCGGCCCAAATTCGGCCGGTCCCCGCGCAGCCA
CACGATTAGCGCATCATTGACCGCCCGATTAGCGAGCTATCCCCACGCGCATCCCCTCCTTCCTCGTGTCAGATCCAGCA
CATGTTTTGATCGGCACCCTGACCCCCTTGCCCCGCTCGCCGGCACACCGTCGCCGCCCCCCAGCTCGCAGGCATAGCAC
GCCGTGCCCGCACGACGGCTCGCAGGTGCAGCTCGTCGTGGCCGCTCACCCCGCTGGACAGTTGCAACAAGATCTCTGCT
TTCACCGGTTCCAGCAAAATCAAAAGCTATTTCCAGCAAAAAACACAAAGATTGAAGCAAAAGTCACGGTTCCAGCAAAA
TCGCCGCCCAGCATATCTCGCCGGTTGAAGCAAATCGCCTAGCCGGTTCCAGCAAAATCAAATGCTATTTCCAGCAAAAC
ACCAAAAGATTGCAGCAAAAAAGCACGCGGTCACCAAAGATTCCAGCACCATCTCGTGGGTTGAAACAAAAACAGCTGGT
TGATTCCAGCAAAATCAATGTTGTTTCCAGCAAAAGAACACAAAAAATGTACCAAAAAACTCACGCCCTTGTTCTTCCAC
CCATGGCAGCATTCCAGCCAACGGGCGTCGCCTCATAGCTTCGCTGGATTGTGGTTGCAGCTCCGCCAGTCTATGGATCC
AGCTCTGACAGAACACGGTTGCAGCATCCAGCCAGCAGGGGCATCACCTTGCAGCTCCACCGGGCGATGGTTCCAGCACA
GCCGGACAGTGCTTCCAGCTTTTTTGGCTGCGGTTGTAGCAACCCTCCTCTCCAGCATGTAGGAGCCTCACAGCTCGCCA
GATCATGATTCCAGCTTTCCCGGGGCACGGTTGCAGCCGCGGCGAATTGCGGTTGCAGCACCATCGCGCCCATCACCATC
GGCGGCCGCATCGCTTTGCATTCGTCGGACATGGCGTCGCTCGCGCTCACCATGAGCCGTCGTCCAGTGCCTATGCAACG
GCATCGCCGTCATCTGCTCACGACGCACGCCCTGTCGTCGCCCTACAACGTCTTGCCCTCCACTTGCCATGGATAAAAAG
CTCGTCGGAAGGAGCACATCGGCACTGTGGTGGGGGATCGGGATGAGCAGAAAGAGGAAATTGGGAGGAGGAAGGGAGAG
AGGAGGCAGAGATAAGGTGGCGATAGATTGTGTGTGGGTCCCGCAATGCATGTGACCTCTTTCCTGTCGTTTGTGTCACG
AGCAGACTGTGTGGTAGTTTCCTGAGCGAGCGAGGCGTGACCGGCCCAAGCTTCGGCCGGTCCGCCGATCATAAACGTTT
CCCAAAAACAAAACCGTACTCCCCCCTGGCCTGCGAGTCCCACGTGTATCAGACCCCACGCGTCGGTGACTCTGCATCAG
GACGTACGTGGCATATGTGTAACTTTGTGTGCTCTCGCCGTACCCCCTTTTTTGCAGATAATACACGAAATTTCCTCCTC
TAGGAAAAACTAGGGTTTGTGCATCTCGCCGGCTCCGCCGCAGGTCCACCCGTGTTTTCAGTGACCCTAGGGCCATGGGA
CGCGGTGGATCCTGGCAAGGACCGGCGGAAGGGCTCCGTTGTTAGTCGTTCCTTTGAGATTTATTAGGGTTTGTGTCCTG
CTCAGGAAGCCGAGACGGCGACGGCTCCCTGAAGATGAAATAAAGGTCTCTTCGCCTAGTTCTCATTTCAGTGGTGCGTC
TAGCGTCGTTGGTGAGCGTGTGGAGGTGTGTCTCCGGCGGACCCATCCTCGGGTGATTTGCTCGGATCTGGTTGTGGTTA
GTCTATGTTCGTGTGTCTTCAGATTGGATCCTTTCGAGCTACTTTATTCTTCATCGACGGCGTTTGCTGTTCTGGTGCGC
TGGTCCTACTGGGCCTTAGCACGATGACTTCCCGTCTGTCTACTATAACACGTTGTGCCCGACTCCGACGAGGGCGTGCC
TTCGGCTCGCTTCATTGCTTGTAGTCGGTGCTATGTGGTCTACAGATCTGGGACTTTTTCACTATTCTGACTCTTTCAGC
AAACTTTGTCACAAAATGAACTCGACATGAAAGTATTTCACGATCTGACCCTTTTTAGCAACGCCATAGCCCGCGGCGTT
TCTGCCCAACATAGCAACGCCGAGGTAGCTAGCGCTTCTGTCCAACAAAGAAACGCCGAGGTAGGTCGCGTTTTGGACCA
TGTAAGAAACGCCATAGGCGTTGGCGTTTCTGACCAAGAAACAAACGCCATAAGTCTTGGCGTTGTGGCCCTGGTTATCG
AGTAGTTTCTTACCTTGGCGTTTCTAAGAAGGTCGGAAACGCCGCTAGCCTTGACGTTTCTGGCCTGGCGTCTCTGGCAG
CTGAGGAGGAAGACCCTGACGAGGCAGCGAGTGGGTTGGGTGCTAGCGAAGAAATGCCAAGGCCTTTGGCGTTTCTCATC
TGGTCCGAAACGCGAGCTACCTTGGCGTTTCTTTGTTAGATAGAAGCGCTAGCTACCTCGGCGTTGGTATGTTGGGCAGA
AACGCCGCGGGCTATGGCGTTTCTAAAAGGGTTAGATCGTGAAATACTTTCATGTCGAGTTCACTTTGTGACAAAGTTTG
CTGAAAGGGTTAAAATAGTGATTTCGGCCACAGATCTGGATGTAATTTTTATTATTTCTTGTATTTGTTGTACTGCCACG
ATTGAAATGAATTGCCACGGTTGAAATGAATAGATAGAAAGTTTTCTGGAAAAAAAACTGGGACCCTGCACGACCAGATA
TACCTCGTCGTAGGGCTTATCTTCCACCGACAGGTGGGTCCTGGACCCCGTGTGTCTGCAACACGATGAGTACGACTAGC
TGGTTGCGTGGAGGCTAGGGTAGCGTGGGCCCCGGTCAAGCGGCGGCGCCCACAGCTGTATCAACTAACAACCAGCTTGG
CGGCGGTTGGTTGACACTACAGGCAACTGACAGGTGAACCTCGATATCTGTGGGCCAGCACGTCAGTTGGAGATCAGCTG
CCCACTTGCGCACGCTGCAGAAACATACGCAAGCGGAGGAATTG----CCCTCACACCATCTCTTCAGTCCATCCACACC
GAGAAAGGAAAAAGATACGGAGAACAGAGGAAGAAACAAGAAATATATATCTATGTTGCGGCGAACGGCGTCGGCGTCGG
C------CGCCATGGTGTCCGGCTACTGGCAGAGGGAAGCCGTGGGTGCGTGCACAGAGAGCCTCGGGTCGGAGAGCGGC
GACGTCGGCGGGGAGATCGAGCAGCTTCCGGCCGGCGCCGGCGCCGGAGTGGACGAGGACGGGCACAACGCGGGAATGGT
GGAGCTTCAGAATTTGGCGGGCAAGAGGCGGCGAGGCGAAAGGCGCCTCCCTCCGGCGATGCCGAGGCCGGCCGAGGCGT
TCATGCGCGCGGAGCGGCGTGGCGGGCGTCTCATCCTCACCCAGGTGGTGCGGCCGGTCGAGCGGCCGCGGAAGGTGTTC
TGTGCGTCCCGCGCCGACGGGCGCCTGCGCCTGCGCTTCGCTGAAGAAGACGCCTTGTACGGCGAAAAGCGCCAAGCACC
TGAATCAGCCGAGACGGAGAGCGGGGCCCTGGTCGGTGGCTGCGGCAACGGCGTGGGGTTTCGCCAGGCAGCGACCGGCA
CCGGGAGGCGCGTCGAGATCGGCGCCGTGATGGGGATATGATCGAGGCCATGAGGTCGGTCGAGTCGTGCCTCGATTCGA
ATGTGGCCGCGTTGCTGCTGGAGTAG------------------------------------------------------
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>chr7B_2014
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---------------------------------------------------------CTCTCTCTTTTTCCTATTAACAC
GTTATCAGCCCTTTGCCCTAAC-----CCGAGCAAGCGATTAGGCCACTAAACAAACCGGCAGCGCCGGCGGCGCCCGCA
CAC---TATCAATCCGTCACCGGCGATGTCCTTGATGGCCGAGAGACGGCCGAACGAGTGCGAGCCCAGACCTCTTTGAC
GCATCGCGTTGTCCCCGGCGGAGCGATTTCACTAACGGCTCGCCTGCGAGCAACGCGGAACTAGCGACAGTCCAAGCCCA
CCGGCGCGTGGTGCGTGCACGCTTCACCCTGCAGAACGGCACGGCGGCGCAAGTCTCCAGCCGGCGCATGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCCGAGGCGTTCACGGCC------CAGGCGCGGCGAATCTCTCGATCTGGGAAGAAACCAGA
TGCAAATGAGATGAAAGCACAAAATCCAGAGAGAAAGGTA-------AGAACGGGGAGGGGATCAGAAGGAAACATACAA
GATCCCTGTAACACATCTCATACAAAACGACAATCATCCAAAGACCAACTCTGTATCTTGATTGATACATCAAGCAGGTG
ATTCAATTCCAATTTCGTTCCTGCACGAAGTAAGCACTAA-CCTCCAGGGCGTCGTTTGC-ATGCCGTCCAAGGCAAACT
TCGGCGGCGACCCATGGCCCGGACAACGCTG-CCTCGGCCAGGCTCCTAGCTGAGCGGCGGCAACCTTCGGCCCGGCTGC
TCCCAGCGCTGCACCCGGAGGTGGCCGCGGCGGCTAATGGCCGGAGACCAGCATGGCAATGCCCTCAGGCGCGCGGCAGC
GCGGTCCACAGCCC
>chr7B_2014
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---------------------------------------------------------CTCTCTCTTTTTCCTATTAACAC
GTTATCAGCCCTTTGCCCTAAC-----CCGAGCAAGCGATTAGGCCACTAAACAAACCGGCAGCGCCGGCGGCGCCCGCA
CAC---TATCAATCCGTCACCGGCGATGTCCTTGATGGCCGAGAGACGGTCGAACGAGTGCGAGCCCAGACCTCTTTGAC
GCATCGCGTTGTCCCCGGCGGAGCGATTTCACTAACGGCTCGCCTGCGAGCAACGCGGAACTAGCGACAGTCCAAGCCCA
CCGGCGCGTGGTGCGTGCACGCTTCACCCTGCAGAACGGCACGGCGGCGCAAGTCTCCAGCCGGCGCATGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCCGAGGCGTTCACGGCC------CAGGCGCGGCGAATCTCTCGATCTGGGAAGAAACCAGA
TGCAAATGAGATGAAAGCACAAAATCCAGAGAGAAAGGTA-------AGAACGGGGAGGGGATTAGAAGGAAACATACAA
GATCCCTGTAACACATCTCATACAAAACGACAATCATCCAAAGACCAACTCTGTATCTTGATTGATACATCAAGCAGGTG
ATTCAATTCCAATTTCGTTCCTGCACGAAGTAAGCACTAA-CCTCCAGGGCGTCGTTTGC-ATGCCGTCCAAGGCAAACT
TCGGCGGCGACCCATGGCCCGGACAACGCTG-CCTCGGCCAGGCTCCTAGCTGAGCGGCGGCAACCTTCGGCCCGGCTGC
TCCCAGCGCTGCACCCGGAGGTGGCCGCAGCGGCTAATGGCCGGAGACCAGCATGGCAATGCCCTCAGGCGCGCGGCAGC
GCGGTCCACAGCCC
>chr5A_2014
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---------------------------------------------------------CTCTCTCTTTTTCCTATTAACAC
GTTATCAGCCCTTTGCCCTAAC-----CCGAGCAAGCGATTAGGCCACTAAACAAACCGGCAGCGCCGGCGGCGCCCGCA
CAC---TATCAATCCGTCACCGGCGATGTCCTTGATGGCCGAGAGACGGCCGAACGAGTGCGAGCCCAGACCTCTTTGAC
GCATCGCGTTGTCCCCGGCGGAGCGATTTCACTAACGGCTCGCCTGCGAGCAACGCGGAACTAGCGACAGTCCATGCCCA
CCGGCGCGTGGTGCGTGCACGCTTCACCCTGCAGAACGGCACGGCGGCGCAAGTCTCCAGCCGGCGCATGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCCGAGGCGTTCACGGCC------CAGGCGCGGCGAATCTCTCGATCTGGGAAGAAACCAGA
TGCAAATGAGATGAAAGCACAAAATCCAGAGAGAAAGGTA-------AGAACGGGGAGGGGATCAGAAGGAAACATACAA
GATCCCTGTAACACATCTCATACAAAACGACAATCATCCAAAGACCAACTCTGTATCTTGATTGATACATCAAGCAGGTG
ATTCAATTCCAATTTCGTTCCTGCACGAAGTAAGCACTAA-CCTCCAGGGCGTCGTTTGC-ATGCCGTCCAAGGCAAACT
TCGGCGGCGACCCATGGCCCGGACAACGCTG-CCTCGGCCAGGCTCCTAGCTGAGCGGCGGCAACCTTCGGCCCGGCTGC
TCCCAGCGCTGCACCCGGAGGTGGCCGCAGCGGCTAATGGCCGGAGACCAGCATGACAATGCCCTCAGGCGCGCGGCAGC
GCAGTCCACAGCCC
>chr4B_2014
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---------------------------------------------------------CTCTCTCTTTTTCCTATTAACAC
GTTATCAGCCCTTTGCCCTAAC-----CCGAGCAAGCGATTAGGCCACTAAACAAACCGGCAGCGCCGGCGGCGCCCGCA
CAC---TATCAATCCGTCACCGGCGATGTCCTTGATGGCCGAGAGACGGCCGAACGAGTGCGAGCCCAGACCTCTTTGAC
GCATCGCGTTGTCCCCGGCGGAGCGATTTCACTAACGGCTCGCCTGCGAGCAACGCGGAACTAGCGACAGTCCATGCCCA
CCGGCGCGTGGTGCGTGCACGCTTCACCCTGCAGAACGGCACGGCGGCGCAAGTCTCCAGCCGGCGCATGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCCGAGGCGTTCACGGCC------CAGGCGCGGCGAATCTCTCGATCTGGGAAGAAACCAGA
TGCAAATGAGATGAAAGCACAAAATCCAGAGAGAAAGGTA-------AGAACGGGGAGGGGATCAGAAGGAAACATACAA
GATCCCTGTAACACATCTCATACAAAACGACAATCATCCAAAGACCAACTCTGTATCTTGATTGATACATCAAGTAGGTG
ATTCAATTCCAATTTCATTCCTGCACGAAGTAAGCACTAA-CCTCCAGGGCGTCGTTTGC-ATGCCGTCCAAGGCAAACT
TCGGCGGCGACCCATGGCCCGGACAACGCTG-CCTCGGCCAGGCTCCTAGCTGAGCGGCGGCAACCTTCGGCCCGGCTGC
TCCCAGCGCTGCACTCGGAGGTGGCCGCAGCGGCTAATGGCCGGAGACCAGCATGACAATGCCCTCAGGCGCGCGGCAGC
GCAGTCCACAGCCC
>chr1A_2014
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---------------------------------------------------------CTCTCTCTTTTTCCTATTAACAC
GTTATCAGCCCTTTGCCCTAAC-----CCGAGCAAGCGATTAGGCCACTAAACAAACCGGCAGCGCCGGCGGCGCCCGCA
CAC---TATCAATCCGTCACCGGCGATGTCCTTGATGGCCGAGAGACGGCCGAACGAGTGCGAGCCCAGACCTCTTTGAC
GCATCACGTTGTCCCCGGCGGAGCGATTTCACTAACGGCTCGCCTGCGAGCAACGCGGAACTAGCGACAGTCCATGCCCA
CCGGCGCGTGGTGCGTGCACGCTTCACCCTGCAGAACGGCACGGCGGCGCAAGTCTCCAGCCGGCGCATGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCCGAGGCGTTCACGGCC------CAGGCGTGGCGAATCTCTCGATCTGGGAAGAAACCAGA
TGCAAATGAGATGAAAGCACAAAATCCAGAGAGAAAGGTA-------AGAACGGGGAGGGGATCAGAAGGAAACATACAA
GATCCCTGTAACACATCTCATACAAAACGACAATCATCCAAAGACCAACTCTGTATCTTGATTGATACATCAAGCAGGTG
ATTCAATTCCAATTTCGTTCCTGCACGAAGTAAGCACTAA-CCTCCAGGGCGTCGTTTGC-ATGCCTTCCAAGGCAAACT
TCGGCGGCGACCCATGGCCCGGACAACGCTG-CCTCGGCCAGGCTCCTAGCTGAGCGGCGGCAACCTTCAGCCCGGCTAC
TCCCAGCGCTGCACCCGGAGGTGGCCGCAGCGGCTAATGGCCGGAGACCAGCATGACAATGCCCTCAGGCGCGCGGCAGC
GCAGTCCACAGCCC
>chr2B_2033
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----------------------------------------------------------------------------ACAC
GTTATCAGCCCTTTGCCCTAAC-----CCGAGCAAGCGATTAGGCCACTAAACAAACTGGCAGCGCCGGCGGCGCCCGCA
CAC---TATCAATCCGTCACCGGCGATGTCCTTGATGGCCGAGAGACAGCCGAACGAGTGCGAGCCCAGACCTCTTTGAC
GCATCGCGTTGTCCCCGGCGGAGCGGTTTCACGAACGGCTCGCCTGCGAGCAACGCGGAACTGGCGACAGTCCAAGCCCA
CCGGCGCGTGATGCGTGCACGCCTCACGCTGCAGAACGGCACGGCGGCGCAAGTCTCCAGCCGGCGCGTGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCCGAGGCGTTCACGGCC------CAGGCGCGGCGAATCTCTCAATCTGGGAAGAAACCAAA
TGCAAATGAGATGAAAGCACAAAATCCAGAGAGAAAGGTA-------AGAACGGGGAGGGGATCAGAAGGAAACATACAA
GATCCCTGTAACACATCTCGTACAAAACGACAATCATCCAAAGACCAACTCTGTATCTTGATTGATACATCAATCAGGTG
ATTCAATTCCAATTTCGTTCCTGCACGAAGTAAGCACTAA-CCTCCAGGGCGTCGTTTGC-ATGCCGTCCAAGGCAAACT
TCGGCGGCGACCCATGGCCCGGACAACGCTG-CCTCGGCCAGGCTCCTAGCGGAGCGGCGGAAACCTTCGGCCCGGCTGC
TCCCAGC-CTGCACCCGGAGGCGGCCGCAGCGGCCAACGGCCGGTGCCCGGCATGGCAATGCCCTCAGGCGCGCGGCAGC
GCGGTCCACAGCCC
>chr7B_2033
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----------------------------------------------------------------------------ACAT
GTTATCAGCCCTTTGCCCTAACCCGACCCGAGCAAGCGATTAGGCCACTAAACAAACTGGCAGCGCCGGCGGCGCCCGCA
CAC---TATCAATCCGTCACCGGCGATGTCTTTGATGGCCGAGAGACAGCCGAACGAGTGCGAGCCCAGACCTCTTTGAC
GCATCGCGTTGTCCCCGGCGGAGCGTTTTCACGAACGGCTCGCCTGCGAGCAACGCGGAACTGGCGACAGTCCAAGCCCA
CCGGTGCGTGATGCGTGCACGCCTCACGCTGCAGAACGGCACGGCGGCGCAAGTCTCCAGCCGGCGCGTGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCCGAGGCGTTCACGGCC------CAGGCGCGGCGAATCTCTCGATCTGGGAAGAAACCAGA
TGCAAATGAGATGAAAGCACAAAATCCAGAGAGAAAGGTA-------AGAACGGGGAGGGGATCAGAAGGAAACATACAA
GATCCCTGTAACACATCTCGTACAAAACGACAATCATCCAAAGACCAACTCTGTATCTTGATTGATACATCAATCAGGTG
ATTCAATTCCAATTTCGTTCCTGCACGAAGTAAGCACTAA-CCTCCAGGGCGTCGTTTGC-ATGCCGTCCAAGGCAAACT
TCGGCGGCGACCCATGGCCCGGACAACGCTG-CCTCGGCCAGGCTCCTAGCGGAGCGGCGGAAACCTTCGGCCCGGCTGC
TCCCAGC-CTGCACCCGGAGGCGGCCGCAGCGGCCAACGGCCGGTGCCCGGCATGGCAATGCCCTCAGGCGCGCGGCAGC
GCGGTCCACAGCCC
>chr5A_2254
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--------------------------------------------------------------GGCGGCAGCCCACGCCCT
CCGGCGCGTGGTGCGAGCACGCCTCACCCTGCAGAGCGGCACGGCGGCGCAGGTCTCCAGACGGCGCGTGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCTGAGGCGTTCGCGGCACAGGCGCAGGCGCTGCGAGTCTCTCGATCAGGGAAGAAACCAGA
TGCAAAGAGAAAGAAAGCACAAAATTCAGAGAAAGGTCAAGAACAGCAGAACGGCAAGGGGATCAGAAGAAAACATTCAA
GATCCCTGTGACACATCTCGTACAAAACGACAATAATGCAAAGACCAACTCTGCGTC-------ATACATCAGTCAGGTG
ATTCAATTCCGATTTCGTTAT--------------ACTAA-CCTCTAGTGCATCGTTTTTAATGCCGTCCAAAGCAAACT
TCGGCAGCAACCCATGGCCCGGTCGACGTTTACCTCGGCTAGGCTCCTCGCGGAGCGGCGACATCCTTCGGCCCGGCTGC
TCCCAGCGCTGCACCCCGAGGCGGCCG-----------------------------------------------------
--------------
>chr6A_2254
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--------------------------------------------------------------GGCGGCAGCCCACGCCCT
CCGGCGCGTGGTGCGAGCACGCCTCACCCTGCAGAGCGGCACGGCGGCGCAGGTCTCCAGACGGCGCGTGGTCGCGTGGC
CTCGACCTCCCGCATCAGCCCGAGGCGTTCGCGGCACAGGTGCAGGCGCTGCGAGTCTCTCGATCAGGGAAGAAACCAGA
TGCAAAGAGAAAGAAAGCACAAAATTCAGAGAAAGGTCAAGAACAACAGAACGACAAGGGGATCAGAAGAAAACATACAA
GATCCCTGTGACACATCTCGTACAAAACGACAATAATGCAAAGACCAACTCTGCATC-------ATACATCAATCAGGTG
ATTCAATTCCGATTTCGTTAT--------------ACTAA-CCTCTAGTGCATCGTTTTTAATGCCGTCCAAAGCAAACT
TCGGCAGCAACCCATGGCCCGGTCGACGTTTACCTCGGCTAGGCTCCTCGCGGAGCGGCGACATCCTTCGTCCCGGCTGC
TCCCAGCGCTGCACCCCGAGGCGGCCG-----------------------------------------------------
--------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------
--------------------S--S--------------------------------------------------------
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------------------------------------------------------S----------------S--------
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----------SS--SSSS-SS-SSSSS-SSSS--SSS-SS----------------------------------------
---------------------------------------------------------------------------S----
-SSSSSS---------------------------------------------S---------------------------
--------------------------------------------------SS----------------------------
--------------------S-----------------------SS----------S-----------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
------------------------------------------------------------S-------------------
-----------------------------------------------------------S--------------------
--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S---SSSSS--S----
--------------S-------------S-----------------------------S--------------SS----S
---SSS-----S-S---------S--------------------------------------------------------
--------------------------------------------S-----------------------------------
-S-----------------------S-----------------S------------------------------------
--------------------------S---------------------------------------S-------------
------------------------------S-------------------------------------------------
-------------------------------------S---------S--------------------------------
----------------------------------------S-------------------------------------S-
---------------------------------------------------S----------------------------
-----SS-------------------------------------------S-----------------------------
S-------------
>forward_3335
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-----------------------------------AGTTGTTCCTTCTCCTGCCG-------------------------
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>reverse_4389
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--------------------------------------------------------------------AACGGAGGTAGC
TAAGCTGC------------------------------------------------------------------------
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>forward_4348
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--------GCGTTGCTGCTGGAGTAGTA----------------------------------------------------
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>reverse_5321
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----------------------------------------ACCTCCAGGGCGTCGTTT----------------------
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--------------
