>input_sequence_68015
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-------------------------------------------------------------------------ACCGACC
GGCCGGCTTCGTACGCCCGT----GCAGAGCCAGTGCGACGTCCATCTCCTGCCACCCGGCTGGGCTA--------GCTA
GCTACCTA-------CCTTGTCCTCCTGTGGCTCGCCGCGCTCCATGACTCCCCAGGCCTGCGCGCGGAGGCCATGAGAC
GACCCGGCGGCGCCGCCCCCGTCGTCGTCCTCCTCCTCTGGCTCGCCGCGCTCACCTTCGCCTTCCACGGCTGCGGCGGC
GGC---CTCCT---CCGTTGCGGAAGCTCGGTGGCCGTGGTTGAGCGGGATCGTCGTCCGGCCTCTCTTCCCAGGAAGAT
GCTTCTGGCCGTGGAGAGCCGGAGCCTCGACCCCTCGTCGGCCGCCGGTGCTCCACAAGATCAACACCACCACCACCACC
AGCACCACCATCATCATCGTGCTGGTCACCACCATCGTCAACGGCACCACCGCCTCCCAAGCAAATGGAACTGGCAGAGA
GTCCCGCCGTCCGCCGCTCCCGGGGACGGCGAGGAGGTCGACCCGCGGTACGGCGTGGAGAAGCGCCTCGTCCCGACAGG
CCCGAACCCGTTGCATCACTGAGGGCC---------------GCCGGGCTTCCATCCATGGGCGATTCTTCATGTACTTA
TCCTGATCA---GAAGCTGCAAAAGCA-TGCAAGGGGGAGGGAGAAAAAG-AACCGAAATTTTACTAGCTGTGGTACATA
TGAATTATTATTATGTTGTCTTGTTGTTGAGTATGCGTCTCTTCCTCTTTCACATTTGTAGTTTGTCCATTCT-----TT
GATTTTCTCTGCTAGCTGCATGATCAAAATCTTGGCATGAATAAGATGAGTACGACTGC---------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr1A_1_TraesCS1A01G043300
GAAAGAAATTTTAAAGCAAAAAACATGACAAGTCTCTACATATATAAGAACCGATGGCGACGGCAACACCGTGTGCCAGC
GGTGCCACCGCATCGACCCATGTAACATGTACATGTAGCGTACACCACATGTTGCCAGCCTGAACTCATTGACCTCCACT
AATCAAATCAAACCAAAGATCAA-------------------------TCACAAAGCGCGAAGCAACAATCCA-CACAAG
TTCTGACTTGTCATCACCCCCGCTCTGACCTTTCCATTTTCGATGTCGTCCCGCAAAAGAAACCGCGGATTAATTAAGAA
CGAAAGCCGCGAAAATTGGTCCGTTCGGTCA----------------GTGCGTGTGAATGAATCGCAATAGCTGGCGGGC
---------TTGAACATGGCACCTCCCAAATCTATCCCAAATTCCGCAACAAGTGGCGAC-----CC---CTGGAAGTCA
AAGCCGGGGCGTACGTTGCGTGA-----------AGCCAACAGCACA--GCACGTTCCTTCAAGAGTGAGCCAGCGTTTT
CTGAATCTCACCTTTTTGTACTGCTGAGTGCTGATC-T----AGCTTGAATTTCCTTGCATGGATGCATTGGGAGCGGGC
GGGCAGGCAGGCGTCTCGTGCCTGCCGCTAAACCTGAGAATTTGACCCGGCCTCCAACAACCTGGAGGCTAGAGCCCCCC
CA---GAAAATCAAAATAACCCGCCATCTACGTAGCACATACGCAAGCCCCAGTTTTTAACCGAATAATACTCCTCA---
--------TTTCCCGGCTTCTACTCGAGCTAGTAGTCA-----CTAGTCAGTGTGCATCCAGCTAGCTAGAGGTAGAGC-
---GT----AGGAGGAGTAGTAAAAC-TGGTGCCACGCTTCCGTGAAGGCGGGATCACCGGCGCCGGCCCATTCCATACG
CTCGCTAGCTCGCAGCTGGCCCAGGAGTCCCATGGAAGCAACCACTC--CCCTCTTAACGCCACATTGAATCCCAATCAA
CGCCAGCGTCCGTCCGTCCGTCCGTCCCCTCCACCA---TA---CGCCATAGCTAACCCCGCAAGCTTCCTCGACCGACC
GGCCGGCTTCGTACGCCCGT----GCAGAGCCAGTGCGACGTCCATCTCCTGCCACCCGGCTGGGCTA--------GCTA
GCTACCTA-------CCTTGTCCTCCTGTGGCTCGCCGCGCTCCATGACTCCCCAGGCCTGCGCGCGGAGGCCATGAGAC
GACCCGGCGGCGCCGCCCCCGTCGTCGTCCTCCTCCTCTGGCTCGCCGCGCTCACCTTCGCCTTCCACGGCTGCGGCGGC
GGC---CTCCT---CCGTTGCGGAAGCTCGGTGGCCGTGGTTGAGCGGGATCGTCGTCCGGCCTCTCTTCCCAGGAAGAT
GCTTCTGGCCGTGGAGAGCCGGAGCCTCGACCCCTCGTCGGCCGCCGGTGCTCCACAAGATCAACACCACCACCACCACC
AGCACCACCATCATCATCGTGCTGGTCACCACCATCGTCAACGGCACCACCGCCTCCCAAGCAAATGGAACTGGCAGAGA
GTCCCGCCGTCCGCCGCTCCCGGGGACGGCGAGGAGGTCGACCCGCGGTACGGCGTGGAGAAGCGCCTCGTCCCGACAGG
CCCGAACCCGTTGCATCACTGAGGGCC---------------GCCGGGCTTCCATCCATGGGCGATTCTTCATGTACTTA
TCCTGATCA---GAAGCTGCAAAAGCA-TGCAAGGGGGAGGGAGAAAAAG-AACCGAAATTTTACTAGCTGTGGTACATA
TGAATTATTATTATGTTGTCTTGTTGTTGAGTATGCGTCTCTTCCTCTTTCACATTTGTAGTTTGTCCATTCT-----TT
GATTTTCTCTGCTAGCTGCATGATCAAAATCTTGGCATGAATAAGATGAGTACGACTGCAGGTGACATTTGCATGTACTG
CATAAGATCGATTATTTGCAGTGATCTGTAATTATTTCACTCTGTGC--TTTACTGATTGGGAAGCCGATGTATGCTT--
CTGGTCGTCAAGTGTGTTGCATTGTTCCCAAGAACTTG-CAATAGATTGAAAATTAAATCTCGAATTATGTATTGGACC-
--------TTTTTTTAGG---AAATGTATTGGGCCTTATAAACACGAACATAAAGGAGTGAACCTGTTTATGGACAGACT
GGCCCAAAGGCCTGGGCCCAAAATCTTAACATCCAGGCCAGGATCCGGCTCCCCGTTTCCGCCCAATG---CCAGAAGTG
AGCAAAATCTGCCATATTGTTAAAAAAAAATAGGTATAATAC-------ATTGTATTTGTATACCCCCAAAATGACTGTT
TTAAAAAAA--TTGGTAACCATGACCAAATATATCTCCTAGATTCCACGGACCGAGTAGCAAAACATCTCATGTAGTTTG
GATATCAGTATATATACAGAGAATCTTAAAACAAAACACGAATCCATTGTCGTCCAGCCCGGTTAGGATACCTGGCTTTC
ACCCAGGCGACCCGGGTTCAAATCCCGGCAATGGAGCCTTTTTTA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------TTTTCTTTTT------ATAAACTTCTACGGTGTGCTGCGTTTTATTCT
GAATATATACCCAAAAATTAGCCCTTGCTAAGCTAAATAAAAATGGTTTGAACTTGTTACTTGTACGACAAAACTTACAT
GGTTTAAACTGGTTAAAGTGCAGCATTTTTTTCCTTTTTGTAAACTTCTGCAGTGTGTTGCGTTTTATTCTGAATATATA
CCCAAAAATTAGCCATTGCTAAGCT-AAAAAAAATATGGTTTGAACTTGTTATTTGTATGAGAAAACTTACATGGTTTAA
ACCTGTTATTTGTAC-----------------------GAGAAAACTTAGCTGATTTTTATTGACTAGTAAGCTTATACG
TGCAACGCATGATAACGCATTAGAAAATTATTTTCTCGTTCATATAGTTATAACGTAGGGCATCT---------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr1D_75
--------------------------------------------------------------------------GCCATC
GGTGCCGCCGCATCGACCCATGTAACATGTAGCGTATACCAC-ATG-CATGTTGCCAGCCTAAACTCATTGACCCCCATT
AATCAAATCAAATCAAAGATCAA-------------------------TCACAAGCGCAAAG----CAATCCA-CACGAG
TTCTGACTTGTCACCAGCTCTGCTCTGACCATTTCA-TTTCGATGTCGTCTCGCAAAAGAAACCGCAGATTAATTAAGAA
AGAAAGCCGCGAAATT-----CGTTCGTTCG----------------GTGCGTGTGAAGGAATCGCT----CTGGCCGGC
---------TTGAACATGGCACCTCCCAA----ATCCCAAATTCCGCAACAAGTGGCGACGGGCCCCTGGCTGGAAGTCA
AAGCCGGGGCGTACGTTGCGTGA-----------AGCCAACAACAACACGCACGTTCCTTCAAGAGCGAGCCAGCGTTTT
CTGAATCTCGCCTTTTTGTGCTGCTACTACTAGCTAGCTACCACCTTGAATTTCCTTGCATGGATGCATTGGGAGCGGGC
----AGGCAGGCGTCTCGTACCTGCCGCTAGACTTGAGAATTTGACCCGGCCTCCAACAACCTGGAAGCTAGCACCGTGG
A--------------------------GTACGTAGCTCATACGCAAACCTCGAATTTTTTATCGCTAAACAATGGAGTAT
CACGAGCGTTTCCCGGCTTCTACTCGAGCTGATAGATAGCTAGCTAGTCAGTGTACGTATATCCAGCTAGCTAGCGCGTA
GGAGTAAGAAGGAGGAGTAGTAAAAC-CGGTGCCACGCTTCCGTGAAGGCGGGATCACCGGCACCGGCCCATTTCAT---
--CGCTCGCTAGCAGCTGGCTCAGGAGTCCCATGGAAGCAACCGCCCCGCCCTCTTAACGCCACATTGAATCCCAATCAA
CGCCAGCGT------------CCGTCCCCTCCTCCACCATA---GGCCATAGCCAACCCCGCAAGCTTCCT----CGACC
GGCCAGCTTCGTACGCTCGT----GCAGAGCCAGTGCGACGTCCATCTCCTGCCACCCGGCTGGTCTG--------GCTA
GGTAGCTAGCTACCGCCTTGTCATCGGCTCCTCG--CGCGCCCCATGACTCCCCAGGCCTGCGCGCGGAGGCCATGAGAC
GACCCGGCGGCGCCGCTCCCGTCGTCGTCCTCCTCCTCTGGCTCGCCGCGCTCACCTTCGCCTTCCACGGCTGCGGCGGC
GGC---CTCCTTGTCAGGCGCGGAAGCTCGGTGGCCGTC---GAGCGGGATCGTCGTCCGGCCTCTCTTCCCAGGAAGAT
GCTTCTCGCCGTGGAGAGCCAGAGCCTCGACCCCTCGTCGGCCGCCGGTGCTCCACAGGATCAACACCACCACCACCAT-
-----CACCACCATCATCGTGGTGGTCACCACCATCGTCAACGGCACCACCGCCTCCCCAGCAAATGGAACTGGCAGAGA
GTCCCGCCGTCCGCCGCTCCCGGGGACGGCCAGGAGATCGACCCGCGGTACGGCGTGGAGAAGAGGCTCGTTCCAACAGG
CCCGAACCCGTTGCATCACTGAGGTTCATGGCC---------GCGGGGCTTCCATCCATGGGCGATTTTTCATGTACTTA
TCCTGATCATCAGAAGCTGCAAAAGCTTTGCAAGGGAGAGGGAGAAAAAG-AACCGAAATTTTACTAGCTATGGTACATA
TGAATTATTATTGTGTTG--TTGTTGTTGAGTATGAAATCTTCCTCTTTTTCCGTTTCTAGGTTGTCCATTCT-----TT
GATTTTCTCTGCTA----CATGATCAAAATCTTGGCATGAATAAGACGAGTG---CTGCAGGTGACATTTGCATGTACTA
CTGTATAA-GATTATTTGCAGTGATCTGTAATTACTTCACTTTGTTCTTTTTACTGATTGGGGAACCGATGTATATGCGC
CTGGTCGTTGAGTGTATTGCATTGCTCCCAAGAACTTGACAATAGATTGAAAATTAAATCTCGAATTATGTATTGAGCC-
--------TTTTTTTAGGCAAAAATGTATTGGGCCTTATAAACACGAACAG-AAGGAGTGAACATGTTCATGGACAGACT
GGCCCAAAGGCCTGGGCCCAAAAGCCTAACATCCAG--------------------------------------------
-GCAAAATCTGCTATGTTGTTAAAAAAA--TAGGTATAATATGGAGTATATTGTATTTGTATACCCCCAAAATGACTATT
TTAAAAAAAATTGAC-AACCATGACTAAATATATCTCCTAGACTCCACGGACCGAGTAGCAAAACATCTCACGTGGTTTG
GATATCTGTATATATAGAAAGAATCTTTCAAGTAGTCACGAATCCATTGTCGTCCAGCCCGGTTAGGATACCTGGCTTTC
ACCCAGGCGACCCGGGTTCAAATCCCGGCAATGGAGTATTTTTTCTT-------AACTTCTGCGGTGTGCTGCGTTTTAT
TTTGAATATATACCAAATCCCGGCAATGGAGCATTTCTTTTTCTTACTATAATCTTCTGCAGTGTGCTGTGTTTTATACC
CAATCCCGGC------------AATGGAGCCTTTTTTCTTTTCTTTTTATAAACTTCTGCGGTGTGCTGCGTTTTATTCT
GAATATATACCAAAAAATTAGCCCTTGCTAAGCTAAAAAAATATGGTTTGAACTTGCTACTTGTACGAGAAAACTTAGAT
GGTTTAAACTTGTTACAAAGGAGAATTTTTTTTCTTTTTATGAACTTCTGCAGTTTGCTGCGTTTTATTCTAAATATATA
CCCAAAATTTAGCCATTGCTAAGCTAAAAAAAAATATGGTTTGAACTTGTTATTTGTATGAGAAAACTTACATGGTTTAA
ACTTGTTATTTTTAC-----------------------GAGAAAACTTAGCTGATTTTCATTGACTAGTAAGCTTACACA
TGTGTTGCACGACAACACACTAGAAAATTATTTTCTCATTCATCTAGTTATTACGTAGGCCATCT---------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr1B_80
-------------------------------------------------------------------------------C
GTTGCCACCGCATCGACGCATGTAACATGTAGCGTATACCACAATG-CATGTTGCCAGCCTAAACTCATTGACCTCCATT
ACTCAAATCAAATCAAAGATCAAGCCTCCGATCGAGCACGTACATCAATCACAATCTCAAAT----CAACAATCCACAAG
TTCTGACTTGTT---AGCTCCGCTCTGACCGCTCCAG------TGTCGTCTCGCAAAAGAAACCGCAAATG-ATTAAGAA
AGGAAGCCGCGAAAATTGGTTCGGTCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATGGCTTGACACAAATGACACAT
TGCTTTGAGTTGAGCATGGCACCTCCCAA----AC-------TCCGCAACAAGTGGCGACGGGCCCC---CTGGAAGTCA
AAGCCGGGGCGTACGTAGGTACGTTGCGTGAAGCAGCCAACAGCACA--GCACGTTCCTTCAAGAGCGAGCCAGCGTTTT
CTGAATCTCACCTTTTTGTACTGCTACTAGCCTACTAT----ACCTTCAACTTCCTTCCATGGATGCATCGGGAGCAGGC
----AGGTAGGCGTCTCGTGCCTGCCGCTAGACTTGAGAATTTGACCCGGCCTCCAACAACCTGGAGGCTAGCGTCCATG
CACGGGAGACTCAAAATAATCCACCATGTACGTGGCTCATACGCAAGCCCCAATTTTTAACCGAATAATTCTCCTCA---
--------TTTCCCGGCTTCTACTCGAGCTAGTAGTCA------------GTGTGCATCCAGCTAG--AGCTAGCGCGTA
GTAGT----AGGAGTAGTAGTAAAACTTGGTGCCACGCTTCCGTGAAGGCGGGATCACCGGCACCGGCCCATTTCATACG
ATCGGC----AGCAGCTGGCTCAGGAGTCCCATGGAAGCAACCGCCCCGCCCTCTTAACGCCACATTGAATCCCAATCAA
CGCCAGCGT------------CCGTCCCATCCTCCAGTCCTCCTCGCCATAGCCAATCCCGCAA----------------
----AGCTTCATACGCTCGTACGTGCAGAGCCAGTGCGACGTCGACCTCCTTCCACCCGGCTGGGCTAGGCTACCGGCAA
GCTAGCTA-------CCTTGCCCTCGGCT--------------CATGACTCCCCAGGCCTGCGCGCGGCGGCCATGAGAC
GACCCGGCGGCGCCGCCCCCGTCGTCGTCCTCCTCCTCTGGCTCACCGCGCTCACCTTCGCCTTCCACGGCTGCGGCGGC
GGCGGCCTCCT---CCGGTGCGGAGGCTTGGCGGTCCAGCTGGATCA---------TCCGGCCTCTCTTCCCAGGAAGAT
GCTTCTCGTCGTGGAGAGCCGGAGCCTCGACCCCTCGTCGGCCGCCGGTGCTCCACAGGATCAACAGCGGCACCACCACC
ATCATCACCATC------GTGGTGGTCGCCACCAACGTCAACGGCACCACCGCCTCCCAAGCAAATGGAACTGGCAGAGA
CTGCCACCGTCTGCCGCTCCCGGGGACGGCGAGGAGGTCGACCCGCGGTACGGCGTGGAGAAGAGGCTCGTCCCGACAGG
CCCGAACCCGTTGCATCACTGAGGACGGGCAGGGTCTTCATGGCCGGGCTTCCAT-----GGCGATTTTTCATGTACTTA
TCCTGATCA---GAAGCTGCAAAAGCT-TGCAAGGGAGAGGGAGAAAAAGGAACCAAAATTTTTCTAGCTGTGGTACATA
CAAGTTATTATGC-----------TGTTGAGTAT-CGTCTCTTCCTCTTTTCCGTTTCTAGGTTGTCCATTCTATTCTTT
GATTTTCTCTGCTA----CATGGTCAAAATCTTGGCATGAATAAGACGAGTG---CTGCAGGTGACATTTGCATGTACTG
TATAAGATTATATTTGC----------------ATTTCACTTTGTGC--TTTACTGATTGGGAAACCGATGT--------
----TCGTTAAGTGTATTGCATTGCTCCCAAGAACTTGACAATAGATTGAAAATCAAATCTCCAATTATGTGTTGAACAT
TTGAACCTTTTTTTAGGC---AAATGTATTGGACCTTATAAACACGAACAG-AAGGAGTGAACCTGTTCATGGACAGACT
GGCCCAAAGGCCTGGGCCCAAAAGCCTAACATCCAGGCCAGGATCGGGCTCCACCTTTCCGCCCAATACCCCCCGAAGTG
AGCAAAATCTGCTATATTGTTAAAAAAAA---GGTATAACAT-------ATTGTA-TTGTATACCCCCAAAAATACTATT
TAAAAAAAA--TGAC-AACCATGACTAAATA------------TCCACGGACCGAGTAGCAAAACATCTCACGTACCGGC
CCGGTTTGGATATATAAAAAGAATCTTAAAACTATTCACCAATCCATTGTCGTCCAGCCCGGTTAGGATACCTGGCTTTC
ACCCAGGCGACCCGGGTTCAAATCCCGGCAATGGAGCTTTTTTTCTTCTTCTTTAACTTCTTCGGTGTGCTGCGTTTTAT
TTTGAATATATACCCAAGCTCGGCAATGGAGCATTTCTTTTTCTTTTCATAAACTTCTGCAGCGTGCTGTGTTTTATTTT
GAATGTATACCCGATCCTGGCAAATGGAGCCTTTTTTCTTTT------ATAAACTTCTGCAGTGTGCTGCGTTTTATTCT
GAATATATACCAAAAAATTAGCCATTGCTAAGCTTG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------AAAGAATATGTGGTTTGAACTTGTTGTTTGTACGAGAAAACTTACATGGTTTAA
ACTTGTTA------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1B_2296
--------------------------------------------------------------------------------
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-------GTATATAGGAAGGGAATCTTAAAACTTTTCATCAATCCATTGTCGTCCAGCCCGGTTAGGATACCTGGCTTTC
ACCCAGGCGACCCGGGTACAAATCCCGGCAATGGAGCTCTTTTTTCCCCTT-----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AACTTCTGCGGTGTGCTGCGTTTTATTCT
GAATATATAGCAAAAAAATAGCCGTTGCTAAGCTAA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------AAAAAATATGTGGTTTGAACTTGTTGTTTGTACGAGAAAACTTACATGGTTTAA
ACTTGTTAACTTACATGGTTTAAACTTGTTATTTGTATGAGAAAACTTAGCTGAATTTCATTGACTAGTAAGCTTACACG
TGCAACGCATGATGACGCATTAGAAAATTATTTTCTCATTCATCTAGTTATTACGTAGGACATCTCCAAGCCAGACCCGC
AAACCTCCCGGAACCGTTAAGACAATGTTGTCCGAACAGGGGAAGCCATCCAACGCGAGTTTGTATTGGTCCGCGAAGCG
GTCCAGATGTGTTTTGTCCCGCAAACAGGAGACAAACGTGGGGGAGGTTTGCGTGAGTCGGAATCGATCCCAAGTCCGCT
TTTGACCGTCCTGACCCACCAAAGCACCTCCTTCCGCGCCCACGTGCATTCCCGCTCGGTGCCAACAGCCCGCATTCATG
CCGCTGTAGAGCGCGTCGCTCCACATTGAGCGGATGCAACCTCTCACTGGCGCCAGCGTTGAAGCGGCTCGTCGGCCCAA
GACGCCGCCCGCGACGCGTCTCCAGTGTCCGCGCTTGTTCAATGCCAGAGACGTGTGACTGGACGAGACGGAACGAATAT
CTACCACCCATGTCCAATGCCCCGTCCGTCCGTATGCCGCCATGAAACAGGCTCGCCGGCCGAGAAACTCACTCCGGCGC
CCCGCATGGATGCACCCGGACGCCTGGCCTCACCGGAATCTGTTATTTAAGCACGGCCAAACCCGGCTGTCTCCACATCA
CAACACATCCATCCCACATCCTCCTCCTTTCCTTCACATCTGCCATTACCGCCAGCGGAAAGCACTGTGGGATAGTATGT
CGCCGGAGATGAAGCACGTGATAGCCGCCCTTGTCGCTGCCATGGCATTGCCGTCGTGCTAGGCGGATCGAGGCCGGCTT
ACCGGGCAGCTCACCCGAGGTCTCCGACAACGAGGATGACACCACGATGGAGACAGTCTCCGATGACTCCACCCCAGCTC
CCACGCCTACTGCGCACGCCGGCTTCATCATGGAGCAGGCGCACTTCAACGCCGCCATGGTGGAGGTGCGGCTGTTGCCG
CCGATGCCTTTATCAGCGTTCCAGCAGACGCAGGAGAAACAGTGGTACAACATGTTCCTCCTGGAGCAGCACCGGCTGGC
GGAAGGTCAGGTCTACGGTGAGCGCTGCTACTTCTTGAGCTGCGTTGGGATTTCCTTGAAGAGGAAAGGATGATGCAGTA
AAGTAGAGATAAGTATTTCCCTTAGTTAAGAACTAAGGTTATCAATCCAGTAGGAGAACCAAGCAAAATCTCGTGAACAA
CACCCACACATAAAAGAACAAATATTTGCACCCAACGCGATCAAGGCGTTTGTCAATCCCCTCAGCGGTTAATTGCTAGG
ATCAAGTCTGATAATGATAGATAGATAAACAAAAATACAAAATAAAATAACGGTAGATAAATTGCAGCAAAGTATTTTCA
GTTTTTATAGATAATAAAGAATACACCCGGGGGCATAGTTTTCACTTGAGGCTTCTCTCTCGATAGAAAGCATATAGTGG
GGTAAAGAAATTATTGTTAGGCAATTGATAAAAAAGCGCATAATTATGACGTATCCAAAGCAATGATCATGTATATAGGC
ATCACGTCCAAGACAAGTAGATCGACTCCTGCCTGCATCTACTACTATTATTCCACCAATCGACCGCTATCCAGCATGCA
TCTAGGTTATTAAGTTGATAAAAATAGAGCAACGCCTTAAGCAAGATGACATGATGCAGAAAGATAGATCCAAGCAATAC
GAATAAACCCCATCCTTTTAGCCTTAATGGCAATAATACAAATACGTGGCATGTCCCTTTCTGTCACTGTGATTGAGCAC
CGCAAGACTGAACTCATCACAAAACACCTCTTTCATTGCAAGAAAAATCAATCTAGTTGGTTAAAACAAACGGATAGATA
GGAGAGAAATACAAAGATATAACAATCATGAATAAAAGAGTTTAAAGAAAACTCAAATAATATTCATCGATAATCTGATC
ATAAACCCACAATTAGTCGGATCCCAACAAACACACCACAAAAGAAGATTACATCGAATAGATCTCCAAGAGAAACGAGG
AGAACATTGTATTGAAGATCAAAAAGAGAGAAAAAGCCATCTAGCTACTAGCTATGGATCCGTAGGTCTGTGGTAAACTA
CTCACACATCATCAAAAGGACAACATGATTGATGTAGAAGCCCTCCATGGTCGAATCCCCTTCCGGCGGAGTACTGAAAA
AGGCCTCCAGATGGTTTATGTCGAGAACAGAAACTTGCGGCGGCAGAAAAAGTGTTTCGGGCGGCTCTCTTTTGGTTTCC
CGATTTTAGAGAATTTATAGAGTCAGGATTAGGTCAAACGGAGCCATGGTGGGCCCACAAGGTACTAGGGCGGTAGGCGC
GCCCTGGTTCCTTGGCCTCTTCGTTGCACATATGGTCTCCTCCCGAAGCTTCTAGGGTCTCTCAAAATCGTCAAAAAGTT
TCGGGGCATTTGTACTTTGTTTGGTACAGTATTCCTAGAAAATCAAAAATAAGAAAAAAAACTGACACTTGTCACTAGGT
TAATAGGTTAGTCCAAAAAGATGATATAAAATTGCCTGTAATTGCATGCAAAACATCCATGATTGATAATATAATATCAT
GGAACAATAAAAAATTATAGATACGTTGAAGACGTATCAAGTGTGTGAGTGAGGAGGCCATGGCCGCGGCGAACCTCAAT
GTCGTTGCGGAGCAGCGTGCCATCTACGATGTCGTCCGTGCTCAAGCCGCCGCTCGTCGGGAAACGGCCACCGCCGAGGC
GCAGCTTCGGGGGACCGCGGAGGATAACAACACCAGTTGTGCCTCCTATGCGCCGCCGCGGAACCATCCGGCGGCCCGGT
GGGACGATGACAACGTGCGTTCCATCATTTCCATCGTGGTCCTCATGTCCACCGGCGAAGGACAAGCTTGTTTCTTACTA
CTGCTTCGGTATATAGGAAGGGAATCTTAAAACTATTCACAAATCCATTGTCGTCCAGCCCGGTTAGGATACCTGGCTTT
CACCCAGGCGACCCGGGTTCAAATCCCGGCAATGGAGACCTTTTTTTTCCTTTTTTTTAAACTACTGTAGCATACTGCGT
TATTTTGAATATACCGAAAGTTTAGCCCATGCTAGCTACACAAAAA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-
-------------------------------SSSSSSS-SSSS-SSS--------------S----------------S-
------------S-----------------------------------------SSSSSS-SSSSS--------------
-------------S--S-S-----------S-----S-------------S---------------S-------------
S-------------------S---------S-----------------------------------S-S-S-----S---
-----------------------------SSSS-----------------------------------------------
------------------------------------------------------------------S-------------
-------------------------SSSS--S---S-------S------------------------------------
SSSS--------------------------S--S--------------------------------------S----SSS
-------S-S---------S--S----S--------S---------------S----------------S----------
----------------------------------------------------------------------SSSSS-S-S-
--------------------------------------------------------------S----------S------
S-----S---S---------S----------------------S-S----------------------------------
---------SSSSSSSSSSSS-----------S--------------------S-----------------SSSS-----
----S-----------S---------------------------------------------------------------
----S--------------------SSS-SSSSSSS-----S--------------------------------------
--------------------------------------------------------------------------------
-----------------S---------------------S-S--------------------------------------
------S--------------------------------------------------S----------------------
-S--S----------------S----------------------------------------------------------
---------------------------------------------------------------S-S--------------
------------------------S------------------------------------------S------------
--------------------------S---------S-------------------------------------------
------------S-----SS------------------------------SS-S---S---S------------------
--------------SSSS----------------------------S----SSSS-------------------------
--------S--------------------------------S----------------------S---------SSSS--
--------S------S--------S--------------------------------------------------S----
--------------------------------------------------SS----------------S-----------
-----------------------S-S-------------------S------S-S------------S-----S------
------------S----------------S-----------S-----------------------------------S--
------------SSSS---------S----------------S----------------------------S--------
------S---------S---------------S-SS--------------------------------------------
-------------------------------------S------S-----------------------------------
--------------------------------------------------------------------------------
------------------------------------SS--------------------S---------------------
-----------S-------------------------S---S--------------S-----------S--------S--
----------S----S-SS-S--S--------S------S-S------------S--S-------------S--------
-------S------------------------------------------------------------------------
--S--------S----------------------------------------------S-----------------S---
-------------------------------------S-----S-------S-------S--------------------
--------------------------------------------------------------------------------
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>forward_1004
--------------------------------------------------------------------------------
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------------------------GAGTCCCATGGAAGCAACCA------------------------------------
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>reverse_1973
--------------------------------------------------------------------------------
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----------------------------------------------------CGACTGCAGGTGACATTTGC--------
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>forward_1233
--------------------------------------------------------------------------------
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-------------TACCTTGTCCTCCTGTGGCT-----------------------------------------------
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----------------------------------------------
>reverse_2075
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GCTTCT
GGTCGTCAAGTGTG------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
