>input_sequence_68014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ATGGCCTCTACAAACCCTTCCTACTACCAGAGT
GGTGTTTGCCAAGACATCAAACACAAGGAGCATC---TCTTCCACTTATACATGAACCAGATCACA------GAAGGAAA
CCCAAATGCCAACCAAAAAATAGTTGTCAATC---CAGGTCTTCCATTGGGGTTTGGTATCACTGTTGCAAACGACTGGG
TCATACGTGATGGTCCGGCCGCTGATGCAAACCTTGTTGTACGTGCTCGTGGCATGCACATGGGTGATGGTAAAGCCGAC
GAGAACTGGTTATTCTGTCACAATATACTGTTCATTGATACAAGGTTGGTTTGCCACATTTTATAGTTACC---------
------TT-ACCTTGGGTCTATATATACTTTTTATGCTAAGATT------------------------------------
----------------------------------TTGTGA-TTTGACTTCACTTATTAGGTTTAAGGGGTCCAGTCTTAA
GGTTCTTGGTGACTTCGTAAGCGGCAAAGATAGTGAA-------TGGGCAATTGTAGGTGGGACTGGAGAGTTTGCATAT
GCACAAGGTGTTGTTGTCGCCAAAGTAATTCAAAATAGGTGCTCTTCTAGCCCTAATGTTGCTCTCAGCTTTCCTAGTCC
AATGGGAACTCCTTAAGACGTCTGATTATTACTGATTTTTCAACGGGGAGGATAACCTTTTGCTATCCCATTATAC-CCG
TTGCTGCTGGTTTTCATCTCCTTTATTTTCCCTCACCTTTTTGTCATCCCATTATGCCCAGCTAATTCTTTACATGAGTG
CACCTTAACAAAAGTGCCTTCTCAATTTGATACGACAAATGTTTACATGAGTGCATCTTTTTTCAAACATGCAGGAGAAT
TTGCATTTGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1A_1_TraesCS1A01G010600
GTGGCTCAATTGATGTGGAGGGGCCCAAAAAATAATAGGTAGTTGTTGGTCAGATGCATGAACCTTTGTGGCATATATAT
ACAGTTCTTCATTTGCATGACCCGGCCGGCTAGCTAGTGTAGGTAAGTCTCAGACATTTTTCATCTGTCTAATCCAAGCG
GGAGAGATTTTGTTTTCATGGACATGTTAGTACTGGCGTTGCTTGGACATCCGGCTGCCAATTTTGTTTACAAAATTATG
AAGTGCAAAGTGCATTTTTAGTGTCTCAACTTCTTGCAACGCGTGGTTTTCGTTGAAAATATAAGTAAGGTAAGATGCGC
TGAGGTAAAAATGTTTTCATATGTTAGCAACAACCGACATATAGCTATTTACGCACACAATACTGGATGTATATCTCAGT
AAAGTAGAATGTCCCATATTCATATGTGCAAGAAAAAAAAGAATGATCAGGTGGAACCAGACAAGGTCTGCCGGTCACAT
TATGTTCACAAGGAAATAAAAACATACATGATTGGATCGATTAGACACCAATTATAGTACGATGGATAACATATAACTTT
TGTATTCTACCAATCAGTTTTAAGCTTATCCTCTAGAAATATTGAGTAACAAAGGACTCGTCTGCAACGCCTCTAAAATA
ACAGGAAAGAGCTAGCTGCATGAAAGTTGACACTCCAAAATGGATATATATTTTTATGACTAGAGCTGCAGTCAAGAAGA
TCAAGTCAGATCTGAAGGACCCCAACGCCTTCCACCTGCCACAGACCTTTTATATACATACTCAAAGACATCAAGCTAGA
TAATATCAAGTCAGATTGAGCCATGGATAATCATGGCAAAACAACGTTAACTAACTACAATTGTCATATACCTATCTCAG
TGCGAATATGCCATGGTCATACTTGGCTATAAATTGCCACCTTCACTAA-TTCATTTCCACACCAAACACA-----CCGA
ATCCTAGCTAGCTCGCTTAGCTCAAGTT-CTCACACATCCCATAGCCATGGCCTCTACAAACCCTTCCTACTACCAGAGT
GGTGTTTGCCAAGACATCAAACACAAGGAGCATC---TCTTCCACTTATACATGAACCAGATCACA------GAAGGAAA
CCCAAATGCCAACCAAAAAATAGTTGTCAATC---CAGGTCTTCCATTGGGGTTTGGTATCACTGTTGCAAACGACTGGG
TCATACGTGATGGTCCGGCCGCTGATGCAAACCTTGTTGTACGTGCTCGTGGCATGCACATGGGTGATGGTAAAGCCGAC
GAGAACTGGTTATTCTGTCACAATATACTGTTCATTGATACAAGGTTGGTTTGCCACATTTTATAGTTACC---------
------TT-ACCTTGGGTCTATATATACTTTTTATGCTAAGATT------------------------------------
----------------------------------TTGTGA-TTTGACTTCACTTATTAGGTTTAAGGGGTCCAGTCTTAA
GGTTCTTGGTGACTTCGTAAGCGGCAAAGATAGTGAA-------TGGGCAATTGTAGGTGGGACTGGAGAGTTTGCATAT
GCACAAGGTGTTGTTGTCGCCAAAGTAATTCAAAATAGGTGCTCTTCTAGCCCTAATGTTGCTCTCAGCTTTCCTAGTCC
AATGGGAACTCCTTAAGACGTCTGATTATTACTGATTTTTCAACGGGGAGGATAACCTTTTGCTATCCCATTATAC-CCG
TTGCTGCTGGTTTTCATCTCCTTTATTTTCCCTCACCTTTTTGTCATCCCATTATGCCCAGCTAATTCTTTACATGAGTG
CACCTTAACAAAAGTGCCTTCTCAATTTGATACGACAAATGTTTACATGAGTGCATCTTTTTTCAAACATGCAGGAGAAT
TTGCATTTGAACTTTATAGATAGAAAAAGAAAAGGGCAGAAGCCCATACATAGTCCAAAAAGACCTCAACAACCAAACCA
AGAAAGATCGAGGGAGCTACATGCACAACATAAAAAGCGTTACCTGAGTGGATATTGTGCAGCTAATTTTTCTTGAAGCA
TATGCAGAGTGACTTCCCATTTGAGAGAATGAGTTGTAAGAAAATCCTCATTGCTCTCTTCAGGTGTAGTGCTAGTGTAA
ATGCATGTAATGAAAAACGAG-------CTTCATGAAGACCAAATCCGGTCTGATTTAGTTGCTCTACATTGAGAACATC
ATGTCCCATGCTTCTCTCACCCAAATAATGTGGCAGAGTTGGTAGTCCTGTAACATAGTAGGCAATGGGCATGGTTTAGC
TATGAGGGCTAGCATTGAAGCTAGCGTTGATTCAACACATGTAGGAGACCTGGGTGCACTGCCCTTTTTCTACACTAATG
GATTGGCCTGTAGGCCCTTCAAATGACAGCTTCTTCGAAGCGAGATATAGCTTCTGTGGGAATGCGCGGCCCCGTGCCCT
TTATGGTCGGCCCATGCATGGGGCTAGACACCCCTGTTTTAGTTTTATGCTATTTTCTTCTCTTTTGTGTTTTCTTTTTT
TCTTCTTTAAAATAATTCTAGAACTCAAAAATGTTCCAAATATCTAAATAATTGCGAAATTCGAAAAACACATCCACGAA
ATCATAATAAAGAATGTGAATTTAAAACAACTTCATTATTTTGATTTTTTTCAAAATATCATAAAATATTCATGGATTAA
AAAATGTTAGTGTTTGAAAAGATGTAAGCATATTGAAAAAATATGCATGATATTGAAAAATGTTCACGATTTTTGGCAAA
AAATATAATTTCAAAACATATTGAAACACTTGAAGGAGTTCATCAAAATGAAAAAGGAAAGGAAAAAATAAGTAAAAGTA
TGGAAAAACAAGAAAAATAAAGAAATAGAAACAGAACAAGGAGAAATAAAAAATAGG
>chr1B_898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CATACTTGGCTATAAATTGCCACCTTCACTCT-TTCATTTCCTCACCAAACACA-----ATCA
ATCCTGCCTTGATTGCTTAGCTTTAGCTCCTCACACATCCCATAGCCATGGCCGCCACTGACCCTTCCTACTACCAGAGT
GGTGTTTGCCAATCCATCACACAGAAGCAGCATC---TCTTCCACTTATACATGAACCAGATTGCC------GAAGGAAC
CCCAAATGCCAACCAAAAAGTCATTGTGAATC---CAGGTCTTCCTCTGGATTTTGGTGTAACCGTTGCAAATGACTGGA
CCATAAGCGATGGTCCAGCCGCCAATGCAAACCCTATCGCACGTGCTCGTGGCATGCACATGGGTGATGGTAAAGCCGAC
GTAAACTGGTTATTCTGTCACGATATATTGTTTACTGATACCAGGTTGGTTTGCCACCCTTTTGAGATGTTAGGGTCTAA
ATTAGCTT-ATGTTGTA--TCTATATCTTTTTGTGCT--AAATT------------------------------------
----------------------------------TTGTGATTTCCACTTCACTTATTAGGTTTAAGGGGTCCAGCCTTAA
GGTTCTTGGAGACTTTGTAGCCAACAAAGATAGTGAA-------TGGGCAATTGTAGGTGGAACTGGAGAATTTGCATAT
GCACAAGGTGTTGTCGTCGCCAAAGTAATCCAAAATA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1B_898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CATACTTGGCTATAAATTGCCACCTTCACTCT-TTCATTTCCTCACCAAACACA-----ATCA
ATCCTGCCTTGATTGCTTAGCTTTAGCTCCTCACACATCCCATAGCCATGGCCGCCACTGACCCTTCCTACTACCAGAGT
GGTGTTTGCCAATCCATCACACAGAAGCAGCATC---TCTTCCACTTATACATAAACCAGATTGCC------GAAGGAAC
CCCAAATGCCAACCAAAAAGTCATTGTGAATC---CAGGTCTTCCTATGGATTTTGGTGTAACCGTTGCAAATGACTGGA
CCATAAGCGATGGTCCAGCCGCCAATGCAAACCCTATCGCACGTGCTCGTGGCATGCACATGGGTGATGGTAAAGCCGAC
GTAAACTGGTTATTCTGTCACAATATATTGTTTACTGATACCAGGTTGGTTTGCCACCCTTTTGAGATGTTAGGGTCTAA
ATTAGCTT-ATGTTGTA--TCTATATCTTTTTGTGCT--AAATT------------------------------------
----------------------------------TTGTGATTTCCACTTCACTTATTAGGTTTAAGGGGTCCAGCCTTAA
GGTTCTTGGAGACTTTGTAGCCAACAAAGATAGTGAA-------TGGGCAATTGTAGGTGGAACTGGAGAATTTGCATAT
GCACAAGGTGTTGTCGTCGCCAAAGTAATCCAAAATA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1B_898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CATAATTGGCTATAAATTGCCACCTTCACTCT-TTCATTTCCTCACCAAACACA-----ATCA
ATCCTGCCTTGATTGCTTAGCTTTAGCTCCTCACACATCCCATAGCCATGGCCGCCACTGACCCTTCCTACTACCAGAGT
GGTGTTTGCCAATCCATCACACAGAAGCAGCATC---TCTTCCACTTATACATGAACCAGATTGCC------GAAGGAAC
CCCAAATGCCAACCAAAAAGTCATTGTGAATC---CAGGTCTTCCTATGGATTTTGGTGTAACCGTTGCAAATGACTGGA
CCATAAGCGATGGTCCAGCCGCCAATGCAAACCCTATCGCACGTGCTCGTGGCATGCACATGGGTGATGGTAAAGCCGAC
GTAAACTGGTTATTCTGTCACAATATATTGTTTACTGATACCAGGTTGGTTTGCCACCCTTTTGAGATGTTAGGGTCTAA
ATTAGCTT-ATGTTGTA--TCTATATCTTTTTGTGCT--AATTT------------------------------------
----------------------------------TTGTGATTTCCACTTCACTTATTAGGTTTAAGGGGTCCAGCCTTAA
GGTTCTTGGAGACTTTGTAGCCAACAAAGATAGTGAA-------TGGGCAATTGTAGGTGGAACTGGAGAATTTGCATAT
GCACAAGGTGTTGTCGTCGCCAAAGTAATCCAAAATA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1B_906
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCTATAAATTGCGACCTTCACTCTGTTCATTTCCTCACCAAACACA-----TCGA
AGCCCAGTTAGCTTGCTTAGCTAAAGCTCCCCACACACCCAATAGCCATGGCCGCTACAAACCCTTCCTACTACCAGAGT
GGTGTTTGCCAAGACATTAAGCAGAAAGAGCATC---TCTTCCACTTATACATGAACCAGATATTTGATGGTCCGGGTGT
TACCAACGCCAACCAAGTCTCTGTTGTCAATCCACCAGGTCAGCTTTTTGGGTTTGGTCACACCATTGCAAACGACTGGA
CCATACGTGATGGTCCGGCTGCCAATGCAAACCTTGTCGCACGTGCTCGTGGCATGCATATGGGTGCGGGCAAAGTTGAC
GAGAACTGGTTATTCTGTCATAATATATTGTTCACTGATACCAGGTTGGTTTCCCATCTTTTAGAGTTGTTAGCGTCCCA
ATTAA-TT-ACACTGCATCTATACATATTTTTTGTGCTAAAATT------------------------------------
----------------------------------TTGTGATTTTGACTTCACTTACTAGGTTTAAGGGGTCCAGCCTTAA
GGTTCTTGGAGACTTTGTAGGAAACA---ATAGTGAA-------TGGGCAATTGTAGGTGGGAGTGGAGAGTTTGCATAT
GCACAAGGTGTAGTGGTCGCCAAAGTAATCCAAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1D_906
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCTATAAATTGCGACCTTCACTCTGTTCATTTCCTCACCAAGCACATTGATTCGA
AACCCAGTTAGCTTGCTTAGATAAAGCTCCCCACACACCCGATAGCCATGGCCGCTACAAACCCTTCCTACTACCAGAGT
GGTGTTTGCCAAGACATTAAGCAGAAAGAGCATC---TCTTTCACTTATATATGAACCAGATATTTGATGGTCCGGGTGT
TACCAACGCCAACCAAGTCACTGTTGCCAATCCATCAGGTCAGCTTTTGGGGTTTGGTCACACCGTTGCAAACGACTGGA
CCATACGTGATGGTCCGGCTGCCGATGCAAACCTTGTTGCACGTGCTCGTGGCATGCACATGGGTGCGGGCAAAGTCGAC
GAGAACTGGTTATTCTGTCACAATATATTGTTCACTGATACCAGGTTGGTT-CCCACCTTTTAGAGCTGTTAGCGTCTCA
ATTAA-TT-AGACTGCA--GCTATATATATTTTGTACTAAAATT------------------------------------
----------------------------------TTGTGATTTTGACTTCATTTATTAGGTTTAAGGGGTCCAGCCTCAA
GGTTCTTGGAGACTTTGTAGGAAACA---ATAGTGAA-------TGGGCAATTGTAGGTGGGAGTGGAGAGTTTGCATAT
GCCCAAGGTGTTGTGGTCGCCAAAGTAATCCAAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1D_906
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCTATAAATTGCCACCTTCACCCTGTTCATTTACTCACAAAACACA-----CCGA
ACACTAGCGAGCTTGCTTAGCTTAAGCTACCCACACACCCGATAGCCATGGCCGCTACAAACCCTTCCTACTACCAGAGT
GGTGCTTGCCAGGAAATCAGACACAAGGAGCATC---TCTTCCACTTATACATGAACCAGGTATTTGATGGTAAACTAGT
TACCAACGCCAACCAACTCGCTATTGTTACTCCA---GGTCTTCCCAATTCGTTTGGTGTCACCATTGCAAACGACTGGA
CCATACTTGATGGTCTGGGCGCGGATGCAAACCTTGTGGCACGTGCTCGTGGCATGCACATGGGTGTGGGTAAAGCCGAC
ATGAGCTGGTTATTCTGTCACACTATATTGTTTGCTGATACCAGGTTGGTTTCCCATCTTTTAGAGCTGTTAGCGTCAAA
ATTAA-TTTACGCTGCACCTACATAT---TTTTGTGCTAAGATT------------------------------------
----------------------------------GTTTGATTTTGACATTACGTAGTAGGTTTAAGGGATCCAGCCTAAA
GGTTCTTGGAGATTTTGTA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chrUn_906
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCTATAAATTGCCACCTTCACCCTGTTTATTTCCTCAGCAAACACA-----CCGA
ACCCCAGCTAGCTTGCTTAGCTTAAGCTCCCCACACACCCGATAGCCATGGCCGCTACAAACCCTTCCTACTACCAGAGT
GGTGTTTGCCAAGACATCAAACAGAAGGAGCATC---TCTTCCACTTATACATGAACCAGATTTTTGATGGTGAGGGTGT
CACCAACGCCAACCAAGTCACTGTTGCCAAGCCATCAGGTCAGCTTTTGGGGTTTGGTCACACCATTGCAAACGACTGGA
CCATACGTGATGGTCCGGCTGCCGATGCAAACCTTGTTGCACGTGCTCGTGGCATGCACATGGGTGCGGGCAAAGTCGAC
CAGAACTGGTTATTCTGTCACAATATATTGTTCACTGATACCAGGTTGGTTTCCCACCTTTTAGAGGTGTTAGCGTCCCA
ATTAA-TT-ACACTGGATCTATTCATATTTTTTGTGCTAAAATTTGGTGATGTTGACTTCACTTATTATGTTTAAGGGGT
CCATCTTTAAAGTTCTTGGAGACTTTGACTTCACTTATGACTTTGACTTCACTTATTAGGTTTAAGGGGTCCAGCCTTAA
AGTTCTTGGCGATTTCGTAAGCGGCAAAGATAGTGAA-------TGGGCAATTGTAGGTGGGAGTGGAGAGTTTGCCTAT
GCACAAGGTGTTGTGGTCGCCAAAGAAATCCAAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1B_907
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTATAAATTGCGACCTTCACTCTGTTCATTTCCTCACCAAACACA-----TCGA
AGCCCAGTTAGCTTGCTTAGCTAAAGCTCCCCACACACCCGATAGCCATGGCCGCTACAAACCCTTCCTACTACCAGAGT
GGTGTTTGCCAAGACATTAAGCAGAAAGAGCATC---TCTTCCACTTATACATGAACCAGATATTTGATGGTCCGGGTGT
TACCAACGCCAACCAAGTCTCTGTTGTCAATCCACCAGGTCAGCTTTTTGGGTTTGGTCACACCGTTGCAAACGACTGGA
CCATACGTGATGGTCCAGCTGCCAATGCAAACCTTGTCGCACGTGCTCGTGGCATGCACATGGGTGCGGGCAAAGTTGAC
GAGAACTGGTTATTCTGTCATAATATATTGTTCACTGATACCAGGTCGGTTTCCCATCTTTTAGAGCTGTTAGCGTCTCA
ATTAA-TT-ACACTGCATCTATACATATTTTTTGTGCTAAAATT------------------------------------
----------------------------------TTGTGATTTTGACTTCACTTACTAGGTTTAAGGGGTCCAGCCTTAA
GGTTCTTGGAGATTTTGTAGGAAACA---ATAGTGAA-------TGGGCAATTGTAGGTGGGAGTGGAGAGTTTGCATAT
GCACAAGGTGTAGTGGTCGCCAAAGTAATCCAAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1D_907
CTAGTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AATTGCCACCTTCGCTCTGTTCATTTCCTCACAAAGCACA-----CCGA
ACCCTAGCTAGCTTTCTTAGCTTAAGCTACCCACACATCTGATAGCCATGGCCGCTACAAACCCTTCCTACTATCAGAGT
GGTGTTTGCAAAGACATCAAACGGAAGGAGCATCTCTTCTTCCACTTATACATGAACCAGATATTTGATGGTCCGGCTGT
TACCAACGCCAACCAACACACTGTTGTCAATCCA---GGTCAGCCTTTTGGGTTTAGCCACACCCTTGCAAATAACTGAT
G-ATACGTGATGGCCCGGCTGCCAATGCAAACCTTGTCGCACATGCTCGTGGCATGCATATGGGTGCGTGCAAAGTCGAC
GAGAACTGGTTATTCTGTCACAGTATATTGTTCACTGATACTAGGTTGGTTTCACACCTTTTAGAGCTGTTAGCGTCTCA
ATTGA-TT-ACACTGTAACTATATACATATTTTGTGCTAAGGTT------------------------------------
----------------------------------TTGTGATTTTGACTTCACTTATTAGGTTTAAGGGGTCCAG---TAA
GGTTCTTGGAGATGTTGTAGGCAACA---ATAGTGAATGGGCATTGGGCAATTGTAGGTGGGAGTGGAGAGTTTGCGTAT
GCACAAGGTGTTGTGGTCGCCAAAGTAATCCAAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1D_1519
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AAAGTAGTTGCTCTTCTACCCCTAATGTTGCTCTCGGCTTTCTCAATCC
AATGGGAAGTCCCTATGACCACTGATCATTACGGATTTTTGATTGGAGAGAATAATCATTTT-TACCCCGTTATACGCCC
TCGCTGCTGGTTTTCATCTCCTCTATTTTCCTTCACCATTTTGCCATCCCATTATACCCAGATAATTCTTTA--------
----TTAATAAAAGTGCCTTCTGAATTGGAGAAAACAAATGTTTACATGAGTGCATTTTTTTG-GAGCATGCAAGAGAAC
-TGAATGTGAACTTTATAGATAGAATAAGACAAGGGCAGAAGCCCATACATAGTCCGAAACGACCTCAACCACCAAACCA
AGAAAGGTAAAGGGAGCTACAGCAAGAAAATAAAAAGAGGTACATGAGTGCATATTGTGCAGCTAATTTTTCTTGAAGCA
TATATATAGGGACTTTCCATTTGAGAGAATGAGTGGTAAGAAATTCCTCATTGCTCTCTTTAAGTGTTGTGCTAGTGTAA
ATGCAAGTAATGGAAAACGAG-------CTACATGAACACCAATCCGGGT-TGATTTAGTTGCACTACATTGAGAGCATC
ATATCCCATGCTCCGGTCACCCAAATAATGTGGCAGAGTTGCTACTCCTGTAATATA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1D_1560
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CCCAGTCC
AATGGGAAGTCCCTATGACCTCTGATCATTACGGACTTTTAATCAGAGAGGATAACCTTTTGCTATCCCATTCTAC-CCC
TTGCTGTTGGTTTTCATCTCCTTTATTTTCATTCACCTTTTTGCCATTCCATTATGCCTATATAATTATTTA--------
----TTAACGAAAATGCCTTCTAAATTTCATAAAATAAATGTTTATATGAGTGCATCTTTTTCCGAACATGCAGGAGAAC
-TGCATGTGAACTTTATAGATAGAAGAAGAAAAGGGCAGAAGCCCATACATAGTCCAAAACGACCTCAACAACCAAAGAA
AGAAAGATGGAGGGAGGTACATGAAGAACATAAAAAGAGCTACATGAGGGCAGAAGCAT---------------------
--------GGAACTTTCCATTTGAGAGAATGAGTTGTAAGAAAATTTTCATTGCTCTCTT---GTGTAGTGCTAGTGTAA
ATGCAAGTAATGAAAATTGAAAAATGGCCTACATGACGACCAGTCTGGGC-TGATTTAGTTGCACCACATTGAGAACATC
ATGTCCCATGCTTCTGTCACCCAAATAATGTGGCAG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>SNPs
S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS------------------------------SS----------S--------------------
-------------S--------S---S--------------------------S--------------------------
--------------------------------------------------------------SS-S-------------S
---------------------S-----------------------S------------S----S---------------S
S---------------------S----------------S----------------------------------------
---------------------------S------S------S---------------S-----S----SSS---------
-----------S----S----------S-----S----------------------------------------------
--------------------------------------------------------------------------S-----
---------S----------------------------------------------------------------------
--------------S--------------S--------S----------S----------------S-------S-----
--------S---S--S---S------S-----S-------S-S---S--------------------------------S
-------------------------------S-----------S-----------------S----------SSSSSSSS
SSSS------------------S---------SS----------------------------S-S--------------S
S-----S------------------S----------------------------------S-------------------
--------S--------------S-S-----------S-S---S------S-----------------------------
---SS-S--S-----S--------------------------------------------S-S-----------------
-----S------------------------S------------SS-S---S------------S----------------
---------------S-------------------------S--S--------S---SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_285
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TCAACTTCTTGCAACGCGTG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2009
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CGAGGGAGCTACATGCACAA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
