>input_sequence_67989
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--------------------------------------------------ATGGCTGGAGTGGGAAGAAATAGGCTGCTG
TTGATCTGCTATCTCCTCCTCCTTGCTATGCTTATCACTGGTGCGTTCTACGTACTCTTAGCATGCATGCACACGTTCTA
CTGCTGCCTGCCTTCTCTTGTTAATTAACTCATTCAAAGGCTCGTAGTAGCTCACTGATTTGTATCTTGTTCTTCTACCA
TGTACTCTACATGGACG----GAAGGTGGTGGTGGTGTTCTAGCTGCTCGTCCGTTCTCGCCTTGGACTCTCGAGACAGA
ACATGAGGTAATGCATATGCATGGCCGGTGTACTTCGTGCATGCATGCCCACGTACACTCTCTGATTAAGTGATTATGTA
TTATCAGATCCAATGATGCCTAGCTCCATGCAAATCACACCCAGTACCAC----AGTATGCAAGCAAGTCAGCTGTTAGA
TCCATTTGTACATA----------------------------TAGGATAGGAAATAGGAGTACATGTTTATCTTCCTCTC
ATCCCATCTCCGTGAGTATGTATAGTAGTACGACGAAATTAAGGATGCTCTGGGAAAGTTCAGACCAGCTATTAATTGAT
TTTCGACGCCATTCTTGTATGAACATATATATGATGCAGGGCTTAGCGAGACCAGAAGGAGGACCACCTGCCGTGGGGAG
CTGGCCAACGGCGGTGATGGACCGGCGCCAGAGGAGGCGGCGGCTGGTGGGGTCGAGGGCTCCGACGTGCACCTACAACG
AGTGCCGGGGTTGCCGGCACAGGTGCAGCGCTCGTGGAGTCCCCGTCGACGCCACTGATCCGATAAACAGCGCCTACCAC
TACAGATGTTTCTGCCATATCTAG--------------------------------------------------------
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>chr7D_1_TraesCS7D01G254300
CGCCAGACAATGCCACCATCCTGCACGTATCCATCCACGTGTGCCCATCACCGAAACTCCGCAGTGCCATGCCACGGAGA
TCCGCTATCGGCCTTGTGGTAGATGTAACACCGCTCCTCCTCTTGTCCCCTCCAGCCAGCACTTGCTCCAATACAATGCC
CCAGGAGGAAGAACAACATCAAAGGCATCGTCATCGTCCGATCCGGTAGGCCCAGATTTGGGGTTTCCCCCGGAACATCC
CGATCGAGTTGACGTGACCTGCAACGATGATGCCTCGAGAAGGAAACGACGACAGAGCACCACCATCGTCCGCCAAGACC
GCAGTCAGGCGTGATTTTCACCGGAATCCGCGTTGTCCCAATCTCGCGGCTGACTGGAATCGCACAGAGCCTCGCCATGA
AGACGTATACGAGTAACATAGCTAGTTACTACTAGTATGAGTAACATCACACATATCAAGGCAAGATGAGTCTATAGGCT
AATAAATAAAGTTTTGCGTTTCACCACACATATGTTACTCCTCACTATAGAAGTAGTAACATAGAGTAGTAACATGGTCA
TGTTACTACTCTATTTTACTACCCGCTGTGGCCAGTCTTACACGCTCAATCGACTAATTAACTTCGGTCACATGTTTATA
AACGATCTGCA---GCTTTCAATACCTTGAAACTAGCACATACGAATTACAACTATGCGAGAAGTATCACGAGTACACAT
TCATGCCGGGTAGTTTCGTAATTTTCCCGGAAGTCCCTAGAACTATAGAACGTACAAATCGTGCACTGTATGCCTTGTCT
TTTTCTCTTTACGGTACCATGCATCCGAGCTTTTTACCTTCCTTCCTTTCGAGACCCC-TTCATTTCCCTTCCTTCATCT
TTTTATCGTTCACTTTTATCTACAAATGAAGACGCACATGGACAATATTATATATACCAGCCTGCCTTCTGTTCGGAGTG
ATCACATGTA------TAGCTAGCTAGGTCACTCTGAAGGGAAAGAGAAAATGGCTGGAGTGGGAAGAAATAGGCTGCTG
TTGATCTGCTATCTCCTCCTCCTTGCTATGCTTATCACTGGTGCGTTCTACGTACTCTTAGCATGCATGCACACGTTCTA
CTGCTGCCTGCCTTCTCTTGTTAATTAACTCATTCAAAGGCTCGTAGTAGCTCACTGATTTGTATCTTGTTCTTCTACCA
TGTACTCTACATGGACG----GAAGGTGGTGGTGGTGTTCTAGCTGCTCGTCCGTTCTCGCCTTGGACTCTCGAGACAGA
ACATGAGGTAATGCATATGCATGGCCGGTGTACTTCGTGCATGCATGCCCACGTACACTCTCTGATTAAGTGATTATGTA
TTATCAGATCCAATGATGCCTAGCTCCATGCAAATCACACCCAGTACCAC----AGTATGCAAGCAAGTCAGCTGTTAGA
TCCATTTGTACATA----------------------------TAGGATAGGAAATAGGAGTACATGTTTATCTTCCTCTC
ATCCCATCTCCGTGAGTATGTATAGTAGTACGACGAAATTAAGGATGCTCTGGGAAAGTTCAGACCAGCTATTAATTGAT
TTTCGACGCCATTCTTGTATGAACATATATATGATGCAGGGCTTAGCGAGACCAGAAGGAGGACCACCTGCCGTGGGGAG
CTGGCCAACGGCGGTGATGGACCGGCGCCAGAGGAGGCGGCGGCTGGTGGGGTCGAGGGCTCCGACGTGCACCTACAACG
AGTGCCGGGGTTGCCGGCACAGGTGCAGCGCTCGTGGAGTCCCCGTCGACGCCACTGATCCGATAAACAGCGCCTACCAC
TACAGATGTTTCTGCCATATCTAGGTGACGCTTCGGCTGTTGTGTTGTTTGCTTGTTTTGACGACGAAAATGGAGTGTTT
ATGT----GCTAGATTCGCATGGATATATGGTTGTCTACTTGTCTTTGTCGAATAAATGGGGCAGAAGACCAGTTGCTAG
TGTTA--------------------------------ATTGACCGAGATGAACTAGTAAGGCCATCTCTAGCTTATCGAT
CTGTGATGTCGCAGGTCTAAGTATTGATTCTGATCCCTTATTCTGTATAACGTTGCATGAAGAGTGGATTTATTTGTGTA
CCTTAATTGCAGCTATGTGTCTCTTACATTTTATATATTTTTTGTTTCAAACCGTTTTCAAATAAAATTAATTCAACAAT
ATACTTTTTGTATCACATAAATTATATTTTCTTAGTTTTACGATGGTCAAAGTAGGACCCAAAATACGAAGGGCCCAATA
ACGAAGAGAGTACCTATTTACTATCTCCGTTTGGGTTTATTAGTCTCATTGTATTTTGGAGCAAATTTTGACTACATATT
TGACTACAAAAAAGTTAATGCATGTCAAAAAAATTA-----------------------------------TATTATTGG
ATTTGTATTTAAATGTAGATTTCGATGATATTAATTTTGCTATGTATAATTTATATTCTAC------------ATGATCA
AAATATAACCTAAAATACAAGGAGAT-GAGTAAACCAGGATGAG-----ATTCCTCTAGGCTGTTG------------CT
TTGACCAACGTACGTGTTGTCTATAGTCAAGCTTTATCCACTAACTGTCTAGTAATAAGCAGATTAATCATGTTACGTAG
TACCCCTCCGTAAAAAGATATAAGAGCGTTTAGATTACTATTTTAGTGATCTAAACACTCTTATATTTCTTTACAGAAGA
AGTATCAAATTTGGTAGGTTATATATTAACATGATTGAATTTTGACTTCTGGAAAATTGTGGATTGCCACCGGATGTCTC
TCTTAGACTACACCACGACAGTCATCCGACCAGCGGCCTAGCTCCCTTTCTCCTC-------CATCACCGTCGGCAAGAG
TTGCATGACAGT
>chr7B_588
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---------------------------GTGGCCTGGCTTACACGCTCAATCGACTAATTAACTTCGGTCACATGTTTATA
AACGGTCTGCA---GCTTTCGATACCTTGAAACTAGAACATACGAAATACAACTATGCGAG--GTATCACGAGTACACAT
TCATGGCGGGTAGTTTCGTAATTTTCCTGGAAGCCCCCAGAACCATAGAACGTACGAATCGTGCACTGTATGCCTTGTCT
TTTTCTCTTTACGGTACCATGCATCCGAGCTTTTTACCTTCCTTCCTTTCGAGACCCC-TCC-TTTCTCTTCCTTCATCT
TTTTATCGTTCACTTCTACTCCTCCTTGAAGAGGCGCATGGACAATATTATATAAACCAGCCTGCCTTCTGTTC-GAGTG
ATCACATGTAC--------CTAGCTAGGTCACTCTCAAGGGAAAAAGAAAATGACTGGAGTGGGAAGAAATAGGCTGCTG
TTGATGTGCTATCTCCTCCTCCTTGCTATGCTTATCACTGGTGCGTTCTACGTACTCTTAGCATGCATGCACACGTTCTA
CTGCTGCCTGCCTTCTCTTGTTAATTAACTCATTCAAAAGCTGGTAGTAGCTCACTGATTTGTATCTTCTTCTTCTATCA
TGTATTCTACATGGACG----GAAGGTGGCGGTGGTGTTCTAGCTGCTCGTCCGTTCTCGGCATGGACTCTCGAGACAGA
ACATCAGGTAATGCATATGCATGGCCGGTGTACTTCGCGGATGCATGCCCACGTACACTCTCTGATTAAGTGATTATGTA
TTATCAAATCCAATGATGCCTAGCTCCATGCAAATCACACTCAGTACCACTGCAAGCAAGCAAGCAAGCCAGCTGTTAGA
TCTATTTTTACATCCCCGCAAAAAAAGATCTATTTTTACATTTAGGATAGGAAATAGGAGTACATGTATATCTTCCTCTC
ATCCCATCTCCGTGAGTATGTATAGTAGTACGATGAAATTAAGGATGCTCTGGGAAAGTTCAGACCAGCTGTTATTTGAT
TTTGGACGCCATTCTTGTATGAACATACATATGATGCAGGGCTTAACGAGACCAGAAGGAGGACCACCTGCCGCGGGGAG
TTGGCCGACGGCGCTGAGGGAGCGGAGCGAGAAGAGGCGGCGGCTGGTGGGGTCGAGGGCTCCGACGTGCACGTACAACG
AGTGCCGGGGTTGCCGGCACAGGTGCAGCGCTCGTGGAGTCCCCGTCGACGCCACCGATCCGATGAACAGCGCCTACCAC
TACAGATGTTTCTGCCATATCTAGGTGACGGCTCGGCTATTGTGTTCTTTGCTCGTTTTGACGACGGAAATGGAGTGCTT
CTGTGCTAGCTAGATTCGCATGGATATATGGTTGTCTACTTGTCTTTCTCGAATAAATGGGGCGGAAGACCAGTTGCTAG
TGTTTTTTTTTCCTTGCGGGGGAGTTGCTAGGTGTTGATTGACCGAGATGAACTAGCTAGGCCATCTCTAGCTTATCGAT
CTGTGATGTCGCAGGTCTAAGTAATGATTCTGATCCCTTATTCTGTATAACGTTGCATGAAGAGTGGATTTATTTCTGTG
CCTTAATTGCGTGTCTC-------------TTACATCTTTTTTGTTTCAAACCTTTTTCAAATAAAA---ATCCAACAAT
ATGCTTTTTGTATCATATAATTTATATTTTCTTAGTTCTACGATGGTCAAAGTATGACCCAAAATACGAGGGGTCCAATA
ACAAAGAGAGTACCTA-TTACTACCTCCGTTTGGGTTTATTAACCTCATCATGTTTTGAAGCAAATTTTGACTACATATT
TGACTACAACAAGGCTAATGCATGTCTCACACACACACACACACACACACACATGTGTGTGTGTGTGTGTGTATTATTGG
ATTCATATTTGAATGTAGATTTTGGTGATATTAATTTTGCTATGTATAGTTTTATATTTTGTTAGTTAAAATTATGGTCA
AAATATGATCTAAAATACGAGAGGTACGAGTAAACCATAATGGGGTAGTATTCCTCTAGGTTGTTGCTTAAATTCCAACT
TTGACCAACGTACGTGTTGTCTAAAGTCAAGCTTTATCCACTAACTGTCCAGTAATATGCA-----ATCGTGTTACGTAG
TAC-----------------------------------------------------------------------------
-----CAAATTTGGTAGGTTATATTTTTACATGATTGAATTTTGACTTCTGGAAAATTGTGGATTGCCATCGGATGTCTC
TCTTAGACTACACCGCGACAGTCATCCGACCTGCGGCCTAGCTCCCTTTCTCCTCCACTCTCCATCGCCGTCGGCAAGAG
TTGCATGACAGT
>chr7A_598
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-------------------------------------TTACACGCTCAATCGACTAATTAACTTCGGTCACATGTTTATA
AACGATCTGCATCAGCTTTCAATACCTTGAAACTAGCACATACGAATTACAACTATGCGAGAAGTATCACGAGTACACAT
TCATGGCGGGTAGTTTCGTAATTTTCCAGGAAGTCCCTAGAACTATAGAACGTACAAATCGTGCACTGTATGCTTTGTCT
TTTTCTCTTTACGGTACCATGCATCCGAGCTTTTTACCTTCCTTCCTTTCGAGACCCCTTCC-TTTCCCTTCCTTCATCT
TTTTATCGTTCACTTCTATCTACAAATGAAGACGCACATGGACAATATTATATATACCAGCCTGCCTTCTGTTCGGAGTG
ATCACATGTAGCTAGCTAGCTAGCTAGGTCACTCTGAAGGGAAAGAGAAAATGACTGGAGTGGGAAGAAACAGGCTGCTG
TTGATCTGCTATCTCCTCCTCCTTGCTATGCTTATCACTGGTGCGTTCTACGTACTCTTAGCATGCATGCACACGTTCTA
CTGCTGCCTGCCTTCTCTTGTTAATTAACTCATTCAAAGGCTCGTAGTAGCTTACTGATTTGTATCTTGTTCTTCTATCA
TGTACTCTACATGGACGGAATGAAGGTGGTGGTGGTGTTCTAGCTGCTCGTCCTTTCTCGCCTTGGACTCTCGAGACAGA
ACATGAGGTAATGCATATGCATGGCCGGTGCATTTCGTGCATGCATGCCCACGTACACTCTTTGATTAAGTGATTATGTA
TTATCAAATCCAATGATGCCTAGCTCCATGCAAATCACACCCAGTACCAC----AGTATGCAAGCAAGTCAGCTGTTAGA
TCTATTTGTGCATA----------------------------TAGGATAGGAAATAGGAGTACACGTATATCTTCCTCTC
ATCCCGTCTCCGTGAGTATGTATAGTAGTACGACGAAATTAAGGATGCTCTGGGAAAGTTCAGACCAGCTATTAATTGAT
TTTCGACGCCATTCTTGTATGAACATATATATGATGCAGGGCTTAGCAAGACCAGAAGGAGGACCACCTGCCGCGGGGAG
CTGGCCAACGGCGGTGATGGACCGGCGCGGGAGGAGGCGGCGGCTGGTGGGGTCGAGGGCTCCGACGTGCACCTACAACG
AGTGCCGGGGTTGCCGGTACAGGTGCAGCGCTCGTGGAGTCCCCGTCGACGCCACCGATCCGATGAACAGCGCCTACCAC
TACAGATGTTTCTGCCATGTCTAGGTGACGGCTCGGCTATTGTGTTGTTTGCTCGTTTTGACGACGGAAATGGAGTGTTT
CTGTGCT----AGATTCGCATGGGTATATGGTTGTCTAGTTGTCTTTGTCGAATAAATTGGGCAGAAGACCGGCTGCTAG
TGTTA--------------------------------ATTGACCGGGATGAACTAGCTAGGCCATCTCCAGCTTATCGAT
CTGTGATGTCGCGGGTCTAAGTATTGATTCTGATCCCTTATTCTGTATAACGTTGCATGAAGAGTGGATTTATTTGTGTA
CCTTAATTGCAGCTATGTGTCTCTTACGT------TATATATTTTTTCAAAACATTTTTTAAAATAAA-AATCCAACAAT
ATACTTTTTGTATCACATAATTTATATTTTCTTAGTTTTACAATGGTCAAAGTATGACCCAAAATACGCAGGGTCCAATA
ACG--GAGAGTACCTATTTACTACCTTCGTTTGGGTTTATTAGTCTTGTCCTATTTCAAAGCAAATTTTGACTATATATT
TGACTGCAAAAAGGCTAATGCATGTCA-----------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS------S-S--------------------------------------------
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-----S---------------------S----------------------------------------------------
------------------------------------------------------------S-S-----------------
---------------S----------------------------------------------------------------
-----------------------------------------------------S--------------------------
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-----------------------------------------------------------------------------S--
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------S-------------------------------------------------------------------------
--S----------------------------------------------------------------S------------
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-------------------------------------------------------------------------S------
----------------------------S---------------------------------------------------
-------------------------------------------------------S--------S---------------
------------------------------SS------S--------------S------------S-------------
S-------------------------------------------------------------------------------
--------------------------------------------------------SS----------------------
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---------------------------S-S---S-------------------S-------------SS---S-------
--------------------S---------------------------------S------------------S------
-----------------------S-------------------------SS-------S---------------------
------------S-S------------S-S-S-SSS--------------------------------------------
---SS-----S-----------S-S-----------------------S---SSSS-S-SS---------------S---
------S-S---------S--SS-SS-----------SS---S-----------------S-------------------
-----------------------S-------------------------S-------S---SSSSS---S----------
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS-------------------S--S-----------------------------------------S----------
--------------S----------------S----------------------------------S-------------
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>forward_352
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------------GATTTTCACCGGAATCCGCG------------------------------------------------
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>reverse_1816
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-------------------------------------------------------TGATCCGATAAACAGCGCCT-----
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>forward_364
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------------------------AATCCGCGTTGTCCCAATCT------------------------------------
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>reverse_1825
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----------------------------------------------------------------AAACAGCGCCTACCAC
TACA----------------------------------------------------------------------------
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>forward_408
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--------------------------------------------------------------------GCCTCGCCATGA
AGACGTAT------------------------------------------------------------------------
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>reverse_2295
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------------------------------------------------------GGACCCAAAATACGAAGGGC------
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