>input_sequence_67976
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------------------------------------------------------------AGC--------CAAGCAAGC
AAGCATCAACAC--------------------------------------------------------------------
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------GTACCTGCACCCATCGCACTAGC---TAGCTTAGCATCACCACGTGCTCTT-----AGAATGGCGTCCTACTAC
A---ACGGCGGC---AGGCCCATGTCCTACTCCAACACCGACGAGGGCTTCGACGGCGGCAGGACCATTTACTCCACCCC
CACCGAG---TGCTACGACGCCAGCAAGCACGGCCTTGGCAT------------AGGCCACG------------GCCATG
GGTATGGCGGGACCAACATGTACTCCAACACCACTGACG---------TCCACTGCTTCGACCCCAGCATGCACG-----
-GGCAAGGCCGCGGCGGCGGTGGCAGGACCATGTATCCCAACACCGCCCACGGGCT------CTTCGACTCTGGCAGGCC
CGGGCATGGGCA------------CGTCCACCGCTACGGGCACAACGACGGTAGGATCATGTCGTA------C------A
CCACTACCACCACCAAGGAGTCCTTCGGCGGAGGCGAGCAGGGGCAGGGGTACTACAAGAAGGAGGTGAAGCAGCACAAG
AACAGGGAGCTCGTCGGTGAGGTTGGCGCCTTTGCCCCGGTAATTACTCAGGAAGTCAACATCGCATAGAGATAGAGTAC
AATCTTATCCATGGAATTAAGGTTGAAGTTATAATAGCCGGCTAGCCTTGCTATAGCAGCTTGAGCAGGGTGCCGCTATA
TGGTGTTTATGTACAATTGTCCGGTAACGTCATGACATACCCGCTAT----------AGTTGATTTGAATGACCACTGCT
ATTACTTTTTGAGAGCCCCCGAGTAATCTTTCCTATTTATAAAGATTGAAATTGGTGGCGAGTTCACATTTGAGTCTAAC
ATTCTTTCTAAATAAA----------------------------------------------------------------
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>chr3D_1_TraesCS3D01G517200
GTGACCGATCACCCATACACGTGACACGATCGCATTACATGGCCGCCGGCCTGTCGCAAGTGCATGGAGATGCAGGCGTG
CTGTTTTAACCCTAGCAGCTAGGGCGTGCTATCTTATTTTTAGGGGAAGGGCACATTGTTTATTTTCTGTTCTTTGAAGG
AAGGGCGTGTGTTCTTTTAGGATATGGCTACCTAA-------GGAGGGAAGCACGTACTGTTTCCTTGGATCATAGGCAC
CTTGCAAGGCAAAAGTCTGATCGATCCTAACTTCTTTTTAGG--------------------------------------
-AATGTATGCATACGTGCATATAGCAATCTAGTAGGCCCCACCTCACCTCATGAAACGTTTTCTCCACTAAAGTTATAAT
GGCAACCGTGGGCAATTTTCTTACTTTAAATCTTATCT-AAAGGCTATAGAAATAAGTATACTAAAAATTAACGGTCGCA
TTTTTTCTAATTTTTGTGGTAATTTCTATGAATTACTCTTT--TATCTGGTTAACCTGTTTATTACTTTTTATATATAAT
AGATTATTTGATA---TAGTAAGTTTATTAAGAGTTTCTCTTAGTCATCAGTTGAACTGTTAATAAGAATCAAGTGACGA
GAAAGAGAGTTACAGCAACACATTTTCGAATGGTG--------------------------TTGAAAGCAGCGGAAAGAA
GAATAACTTTATTGAGTGCTGCAAAAAAAAAATGCTCCCAGTTGTCGAATTATGGCTATCCCATACCCTTTCCCAAAAGA
GAGAAAACAACTTCTTTTTCTGAGAACGAGAGAAAACAACTTGATCAGATGAATCTTGGCAAGTTTTGCATATGAAGGCT
ATATATGTATATAACATCTGTCGGCAGCGACAAAACGATGCTGAAAATGTTCACAGCTACA-GT--CCCAAATATTGATT
TCAATAATAGAGGCGATCATGGAATCA-----T---CTTTGCTCTCCAATTTATCTCCACCGTCCGTCGTCTCCTTTCAC
--TGCCACTCGCCACGC-TATAAATACACCCCT-TCCACGGCACATTTGTG-------ACAGC--------CAAGCAAGC
AAGCATCAACAC--------------------------------------------------------------------
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------GTACCTGCACCCATCGCACTAGC---TAGCTTAGCATCACCACGTGCTCTT-----AGAATGGCGTCCTACTAC
A---ACGGCGGC---AGGCCCATGTCCTACTCCAACACCGACGAGGGCTTCGACGGCGGCAGGACCATTTACTCCACCCC
CACCGAG---TGCTACGACGCCAGCAAGCACGGCCTTGGCAT------------AGGCCACG------------GCCATG
GGTATGGCGGGACCAACATGTACTCCAACACCACTGACG---------TCCACTGCTTCGACCCCAGCATGCACG-----
-GGCAAGGCCGCGGCGGCGGTGGCAGGACCATGTATCCCAACACCGCCCACGGGCT------CTTCGACTCTGGCAGGCC
CGGGCATGGGCA------------CGTCCACCGCTACGGGCACAACGACGGTAGGATCATGTCGTA------C------A
CCACTACCACCACCAAGGAGTCCTTCGGCGGAGGCGAGCAGGGGCAGGGGTACTACAAGAAGGAGGTGAAGCAGCACAAG
AACAGGGAGCTCGTCGGTGAGGTTGGCGCCTTTGCCCCGGTAATTACTCAGGAAGTCAACATCGCATAGAGATAGAGTAC
AATCTTATCCATGGAATTAAGGTTGAAGTTATAATAGCCGGCTAGCCTTGCTATAGCAGCTTGAGCAGGGTGCCGCTATA
TGGTGTTTATGTACAATTGTCCGGTAACGTCATGACATACCCGCTAT----------AGTTGATTTGAATGACCACTGCT
ATTACTTTTTGAGAGCCCCCGAGTAATCTTTCCTATTTATAAAGATTGAAATTGGTGGCGAGTTCACATTTGAGTCTAAC
ATTCTTTCTAAATAAACAAGTACAGTGATTCCCACATGTGGAGTAAAGTGCTCAAAACCATCGTATTTGTGTCTAGGGTA
CTCCAAAACTACTG-TTTTTTTTAACAAAAATCACAAAAGACCACTACTTCCGCGCCAAGTGAATAAC------------
---------GAGCGCGTTTAACAGC-AAACTGACGGGTGGGACCCATATGTGCAGGTTGATGTGGCGAAGACTAGTCCTA
GTCAATGTTTGACCTACTGAGGTGGACGGGGGTCCCACCTGTCAGCCACACCTCTGGGCTCCTCTCTCCTTTCCTACTCT
TCTCCCCTCTCCTTCGTCCTTCCCACAGGAGCGGCGACCGTGGAAGAACAGTGGCGGCTGCTGACCCAGTCCGCTCCGGC
GAGGCTGAGCTGCCGTGCACCCGCGCCCCAGCAT------GCAAGGCTGAGCCCCCAGCGCGCGCCCCTACCCGCTCCGG
CAAGGCCAAGGCCCCACATGCCCGCGCCCCTGCTCGCTCCGGTGAGGCCGAGCCCCCGCGTCCCCGTGCCCATACCCACT
CCGGCGAGGGCAAGGCCCTGCCTGCCCGCACCCCTGCCCCTGCAAACTCCGGTGAGGCCGAGGCCTCGCCTGCCCTGCCC
CTACGCACGGCAGTGCTGCAGCTCAAAGCGCGATTCGCGACGCACCGCCGAGTTCAATGTGGTAGGCTTGCGGCGGAGGA
GGCAGCGTGCCATGACGCCTTGCCTGGTGGATCCGGTGGCCGGTACCTGGATCCGGCGCTGGTGCCGGTGGGAGCTCGTA
GGGCAGCCCCGCCGTGTCAGGTGAGGTGGCCGGAGCCG------------------------------------------
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---GCGAGGGGAGCGGAGATGGCTGTGCGCAGGTGCATGGCACAGTTGTGACGGTCGGCATGGTGCGGGAGTAGCCGGAG
AAAGAAAAAGAAAAGGGGGAAATAAGCCATGTGGCTGACAGGTGGGGCCCTGTCCACCTCAGCGAGTCAACACATTGACT
AGGACTAG--TTTTCCCCCATCATCCTGACGGTTGGGCCCCACTGGTCAGTT
>chr3A_1
GTGACCGATCACCCATACACGTGACGCGAGCACACTACATGGCCGCCTGCCTGCCGCAAGTGCATGGAGATGCAGGCGTG
CTGTTTTAACTCTAGGAGCTAGGGTGTGCTATCTGATTTTTAGGGGAAGGGCATATTGTTTATTTTCCTTTCTTTAAAGG
AAGGGCGTGTGCTCTTTTAGGATATGACCAATATTTTCTCAGGGAGGGCCGCACGTACTGTTTCCTTGGATCGTAGGCAC
CTTGCAAGGCAAAAGTCTGATCGATCGTAACTTCTTTTTAGGGAGATCGAATCTAATAAGCAAACCTTTTTCTTCCAGAT
GAATGTATACGTACGTGCATACATCGATCTATTAGGCCCCACCTCACATCATGAAACGTTTTCTCCACTAAAGTTATAAT
GAAAATGGTGGGTAATTTTCTTACTTTAAATCTTATCCAAAAGGCTATAAAATTAAGTATATTAAAATTATGGTCGTA--
-TTTTTCTAATCTTTGTGGTAATTTCTATCAATTTCTTTTTTATATCTGGTTAACCTGTTTATTACTTTTTATATATAAT
AGCTTATTTGATATACTAGTAAGTTTATTAAGAGTTGCTCTTAGTCATCAGCTGAACTGTTAATAAGAACCATGTGACGA
GAAAGGGAGTTACAGCAACACATTTTCATTTGGTACTAGAGTTAGAGATATGGATGCTCTATTGAAAGCAGGGGAAAGAA
GAATAACTTTATTGAGTGCTGCAAAAAAAAAAAACTCCCAGTTGTCCAATTATGGCTATCCCATACCCTTTCCCAAAAGA
GAGAAAA-----------------------------CAACTTGATCAAATGAATCTTGGCAAGTTTTGCACATCAAGGCT
ATATATGTATATAACATCTGTCGGCAGCGACAAAACGATGCCGGAAATGTTCACAACTACA-GTCCCAAATATTTTGATT
TCAATAATAGAGGCGATCATGGAATCA-----T---CTTTGCTCTCCAATTCATCTCCACCGTCCGTCGTCTCCTCTCAC
--TGCCACTCGCCACGC-TATAAATACACCCCT-CCCACGGCACATTTGTG-------AGAGC--------CAAGCAAGC
AAGTATCAACAC--------------------------------------------------------------------
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------ATACCTGCACCCATCGCACTAGC---TAGCTTAGCATCACCACCTGCTCTT-----AGAATGGCGGCCTACTAC
A---ACGGCGGC---AGGCCCATGCCATACTCCAACACCGACGAGGGCTTCGACGGCGGCAGGACGATTTACTCCACCCC
CACCGAG---TGCTACGACGCCAGCAAGCACGGCCTTGGCAC------------CGGCCACG------------GCCATG
GGTATGGCGGGACCAACATGTACTCCAACACCACTGACG---------TCCAGTGCTTCGACTCCAGCATGCACG-----
-GGCAAGGCCGCGGTGGCGGTGGCAGGACCATGTATTCCAACACCGCCCACGGGCT------CTTCGACTCAGGCAGGCC
CGGGCATGGGCA------------CATCCACAGCTACGGGCACAACGACGGTAGGATCATGTCGTA------C------A
CCACTACCACCACAAAGGAGTCCTTCGGCGGAGGCGAGCAGGGGCAGGGGTACTACAAGAAGGAGGTGAAGCAGCACAAG
AACAGGGAGCTCCTCGGTGAGGTTGGCGCCTTTGCCCCGGTAATTACTCAGGAAGTCAACATCGCATAAAGATAGAGTAC
AATCTTATCCATGGAATTAAGGTTGAAGTTATAATAGCCGGCTAGCCTCGCTATAGCAGCTTGAGCAGGGTGCCGGTATA
TGGTGTTTATGTACAATTGTCCGGTAATGTTATGAAATACCGACTATAGCTCTCTATAGTTGATTTGAATGACCACTGCT
ATTATTTTTTGAGAGCCCCATAGTAATCTTTCCTACTTATGAAGATTGAAATTGGTGGTGAGTTCACATTTGAGTCTAAC
ATTCTTTCTAAATAAACAAATACAGTGATCCCCACATGTGGAGTAAATTGCTCAAAACCATCATACTTGTGTCTAGGGTA
CTCCAAAACTACCG-TTTTTGC---CAAAAATCACAAAAGATCACTACTTCCGCGCCAAGTGAATAAT------------
---------GAGC-CGTTTAATAGC-AAACTAACAGGTGGGACCCATCTGTCCAGGTTGATGTGGCGAAGACTAGTCCTA
GTCAATGTTTGACCTGCTGAGGTGGATGGGGGTCCCACCTGTCCGCCACACCTCTGGGCTCCTCTCTCCTCTCCTTCTCT
TCTCCCATCTCCTTCTTCCTTCCCACAGGAGCCGCGACCGTGAAAGAACAGCAGCGGCTGCTGACCCAGTCCGCTCCGAC
GAGGCCGAGCTGCCGTGCACCCGCGCCCCAGCAT------GCAAGGCCGAGCCCCCAGCGCGCGCCCCTGCCAGCTCCGG
CTAGGCCGAGTCCCCACATGCCCGCACCCCTGCCCGCTTCGGTGAGGCTGAGCCCCCGTGTCCCCGCGCCCATACCCACT
TCGTGGAGGACGAGGCCCTGCCTGCCCGCACCCCTGCCCCTGCAAACTCCGGCGAGGCCGAGGCCTCGCCTGCCCTGCCC
CTATGCGCGGCGGTGCTGTAGCTCAAACCGCGATTCGTGAAGCGCCGCCGAGTTCGATGTGGTAGGCTTGCCGCGGAGGA
GGCAGCGCGCCATAACGCCTTGCGTTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGCGAGGGGAGCGGAGATGGCTGCGCGTAGGTGCATGGCACGGTTGTGGCGGTCGACATGGTGCGGGAGTGGCCGGAG
AAAGAACAAGAAAAGGGGGAAATAAGACATGTGGCTAATGGGTGGGGCCCTGTCCACCTCAGTGAGTCAACACATTGACT
AGGACTAGTTTTTCTCCCCATCAGCTTGACAGTTGGGTTCCACT--------
>chr3B_622
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---------------------------------TG--------------------------TTGAAATGAGCGGAAAGAA
GAATAACTTTACCTAGTGCTGCCG---AAAAATGCTCCCAGTTGTCCAATTATCG------CATACCCTTTCCCAAAAGA
GAGAAAA-----------------------------CAACATGATAAGGCAAATCTTGGAATTTTTTGCACACCAAGGC-
---AATGTATATAACACCTGTCGGAAGCGACAAAATGATGCTGAAAATGTTCCACAATTATTGT--CACAAATTAAGATT
CCAATAATAGAGGCAATCATGGAATCA-----T---CTTTGCTC--CGATCAATCTCCACCGTCCGGCATCTCTTTGTAA
--TGCCACTCGCGACGC-TATAAATACACTCTT-CCT-CGACACATTGCTACAAGCCTACAAC--------CAGCCAAGC
AAGCATCAACTC--------------------------------------------------------------------
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------CTGCGTCCAGCTTAGCACTTAGCAG-----TTAGAATCACCACCTGCTCTT-----AGAATGGCGGGCTACTAC
AACGGCGGCGGC---AGGACCATGTCCTACTCCAACACCGACGAGTGCTTCGACGGCGGCAGGACCATGTACTCCAACAC
CACCGAGGAGTGCTACGACGCCGGCAAGCACGGCCACGGCCACGGCCACGGCCACGGCCACG------------GCCATG
GACACGGCGGGGCAAACATGTACGCCAACACCACTGACG---------TGGAGTGCTTCGACTCCGGCAGGCA-------
-----CGGCCACGGCGGTGGCGGCAGGACCATGTACTCCAACACCGTCGACGAG---GAGTGCTTCGACTCCGGCAGGCA
CGGGCATGGGCATGGGCACGGCCACGGCCACGGCTACGGGCACAACGACGGCAGGGCTATGTCCTA------CT---CCA
CCAC------CACCGAGGAGTGTTTCGGAGGAGGCGAGCAGGGGCAGGGGTACTACAAGAAGGAAGTGCAGCAGCACAAG
AACAGGGAGCGCGTCGGCGAGGTCGGCGCCCTCGCCGCCGGT--------------------------------------
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>chr3B_705
AAAGA---------------------------------------------------------------------------
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-----------------------------GAGATAATAACTTGATTAGATGAATCTTGGGAAGTTTTGCATATCAAGGC-
---TATGTATATAACATCTGTCGGCAGCGACAAACTGATGCTGAAAATGTTCACAACTACA-GT--CCGAAATAATGATT
TCAATAATAGAAGCGATCATG----CATGGAGTCATCTTTGCTCTCCAATTAATCCAAACGG-------------TTCAC
--TGCCAGTCGCCATGC-TATAAATACACCCCCATCCTCGGCAGATTTGTG-------GCAGC--------CAGGCAAGC
AAGCATCAACACATATATGCACCCATGGCACTAGCTAGCTCAGCACCACAACCTGCTCTTACCATAAAATTGAATATGTG
CCATTTTTCAAAAGTAAATCTTACCTAATAATTGGCCATTTTTTTCGATGATGTGGGCCCCTGGTTGGAATACACAACTG
CAAGAGTGGAAGGAAAAATGCAGAGTTTGTGTGCTGGCCCACGAGACCGAGCAGTTGCTTGCGACGAGCCATTGCCTGCG
CGAATGCAAAGTCTCGACAACTGCGAGATGGTAATCCATATCATGGTAGGTGATCGCTAGATGGGCTGGCTCAATATGGT
TTTCTGGGACACGGTTTTCGGAATTTTGTATGACAGGTTTCGACCGGTTTTAGAAGCTTCTACGTGTTATATTTTTATTT
TTTTTCTCCTTTCTGTGCTTCTTCGCCGGCTTTCCTCCGTTTTCATATTTCTCAAAAACATGTCCATTTTTCAAATACAC
GTTGTTCATTTTGTTAAGTACACGTTTTCAACATTTTCTCCAATACATGGTAAACATTTTTAAACATATTGAACATTTTT
TAAATGGCATGAAACATGTCATTGAACTATGCGAACATTTTTTTACATTGTACACACATCCATAAACTTAAATGCGTGAA
AGATTTTTTTACAATTTCACATACTTTTTTGAGTGGCATCATATTTATTTTTCCGAATGACACAAAGTTTTTGTACATTA
CAGATAGATTTAATAAAATTTCAGAAACGTTCTTTAGCACGTGACATATGTTTAAAATGTCACGAACATTTTTTAATGCT
ACCAATTTATTGTCTAAAAGTTGTGCATATACTTTTTCACCACATGGACATTTTTAATGTGGGTGCACCTTTTCAAATTT
CGAAGAAATATTATATATATATATATTATGAATATTTTAAATATTATATATATATATATTCTGAATATTTTAACACGTGT
AGAAAAGAAAATTTGAACAAAACAAATATTAAGAATAAATATCAGTACATGCATGGTACTGGGCTGGCCAACTATCCTAT
CGACCGAGACGAGGCTAGGTTTCATGTAAAGCGATCCCTAGACATGCCCTGCAGGTGTACATTTTATTTTGAACACAGTA
CACAGGCAAGCGCTTATATATATACGAGTGTGCACTCACTTCTATGAACGCACACACGCATACCTTATCCGTATGAGAAC
CTCCGAGAGACTGAGTCGGCATATCATCTTAAGAACGACGAAGTCACCATGGACGCCTCGTAGTCGATGGAACGTCTCCC
CTCCCACTGAACGCGCATCCCGGGAAAACCTGAAATAAATCCAGCAAAATCCGAGCACTAGTACTTAAACCTGATGGGCT
GGGGGTAGCACTGTCCTCCTAACCATCCAACCACAGGTTGGTTTGCCCCGTAGATGTACATTGGGGAGCCCGTTTTCCCC
CATAAAAAAGGGGGACCCCGATTTTCAAAGCAATATTTATCCCTCATAGTTAATCCAATTAAAATTGCACAAATGAATTT
TATTTATGTTTGATTCTGACATAGTTGCATTTGTTTTATGTGTTACTTCATCTTGATTGTGACATAGCATATGTGTTTTC
TTAGTCTGCGTCTTAAAAGACAATTTTATAATGTCTTGTAGTCTTTAGGTGGGAGCAATCGTGGATTCTAGTATTTATGT
ATCTTTTTTAATAAAGGGAATATATTAACATCATTAAGATATCAATCATAGCCAATCGGTCTTACACTAAAACGATATCC
ATAGCTAATCAAGATATCGAGAATGCACAAATGCCCACTAATAAATGAGAAATTTGTTCAAAACTTGAAAGAGACAAGTG
AAATAAAAGCATGATTTGGCCAAAGTGAACTGAGATTGAGATTCTTAGAATATGTAGTTGTGTGGCCAGTAAGCAATGTG
CTGTAAATATCCTATCCTGGTTATCTGCTGTTTCTTGACCAAATATGAGATCTGTTTGTACTGCCATGTTTCTCCCGTGG
GCATATTCTTTTTCATGAGAACTGAAGTTGGCTTTTGTTACTAAATCTAGTAGTTTGGGTTTACTAAGCTAACGCATTAG
CCGTCTCTTTGCTTTCTACCAAAAAAAAATCCATGTCTAATGGTTTTCGTTTAGTAAGAGAACTCATGCTTATGTATGCT
AAGTTGCTCACTCCCATCTCCCAATGGCATCAGCTGGATACGGGGTTAAGAGTTAAGACATCAACTAAAGTTTGTTAAGA
GTGATTTTTTTGATATAGTAAATTGATAAGAGTCGCTCTTACTCATCTCAGGTGAACTATTAATAAGAACCATGTGACGA
GAAAGAGAGTTACAGAAACACATTTTCATTTGGCACTAGAGATAGAGATATGGATGCTCTGTCGGAAGGAGAGGAAAGAA
GAATAACTTTGTTGAGTGCTGTAAAAACAAAAAATCTTTATACCCTTTCCCAAAAGAGAGAAAACAACTTGATACGATGA
ATCTTGGCAAGTTTTGCATATCAAAGCTATGTATGTATATAACACATGTCGGCGGCGACAAAATGATGCTGAAAATGTTT
TAGAACTACAGTCCCAAATAATGAATTCAATAATAGAGGCGATCATGGAATCATCTTTGCTTTCCAAATTAATCCCCACC
TCGTCGTCTCCTTTCACTGCTAGTCGCCATGCTATAAATACAACCCTTCCTCGGCACATTTTTGGCAGCCAAGCAAGCAT
CAACAGGTACCATTATCCATTACACA---AGCTACCTTAGC-TCACCATGTGCTCCTAAAAGAGAATGGCGGCCTACTAC
A---ACGGCGGC---AGGCCCATGTCCTACTCCAACACCGGCGAGGGCTTCGACGGTGGCAGGACCATTTACTCCACCCC
CACT---GAGTGCTATGACGCCAGCAAGCACGGCCTTGGCAC------------CGGCCGCG------------GCCATG
GGTATGGCGGGACCAGAATGTACTCCGACACGACCGACGTCCAGTGCTTC---------GACTCCAGCATGCACG-----
-GGCAAGGCCGCGGCGGCGGTGGCAGGACCATGTATTCCAACACCGCCGACGGGCT------CTTCGACTCAGGCAGGCC
CGGGTATGGGCA------------CGTCCACAGCTACGGGCACAACGACGGTAGGATCATGTCGCA------CACTACTA
CCAC------CACCAAGGAGTCCTTCGGCGGAGGCGAGCAGGGGCAGGGGTACTACAAGAAGGAGGTGAAGCAGCACAAG
AACAGGGAGCTCGTCGGTGAGGTCGGCGCCTTTGCCCCGGTAATTACTCAAGAAGTCAACATAGCATAGAGATAGAGTAC
AATTTTATCTATGTAACTAAGATTGAAGTTTTAATAACCGGCTAGCCTCGCTATAGCAGTTTGAGCAGGGTGTCGCTATA
TGGTGTTTATGTACAATTGTCGGGTAACGTTATGAAATAGCCACTATAGCCCGCTATAGTTGATATGAATGACCACTACT
ATTAATTTTTGAGAGCCA--GAGTAATCTCTCCTACTTATGAAGATTGAAGTTGATGGTGAGTTCACTTTTGCGTCCAAG
ATTCTTTCTAAATAAACAAATACAGGGATCCCCACATGTAGATCAAATTGCTCAAAACCATCATATTTGTGGCTAGGGTA
CTTCAAAACTACCA-TTTTTGC---CAAAAATTATAAAAGACCACTAATTTTGTGCCAAGTGAATAAC------------
---------GAACACGTTTAATAGCAAAACTGATGGGTGGGACCTGTCTGTCCAGGCTGATGTGGC--------------
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>chr3D_747
AACAGG--------------------------------------------------------------------------
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-------------------------------GACAACAACTTGATGAGACGAATCTTGGTAA-TTTTGCATATCAAGGC-
---TATGTATATAACACCTGTCGGCAGGAACAAAATGATGCTCAACTGT-----------A-GT--CAGAAATTGAGATT
CCAATAATAGAGGCGATGATG----AA-----TCATCTTTGCTCTCCAATTCATCTCCACCGTCCATCTTCGCTGTCACT
--CACCAGTCGCCACGCTTATAAATACACCCCT-TCCACCGCACATTTGTG-------ATAGC--------CAA----GC
AAGCATCAACAC--------------------------------------------------------------------
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------GTACCAGTACCCAGCACACTAGCAGCTAGCTTAGC-TCACCATCTGCTCTT-----AGAATGGCGGCCTACTAC
A---GCGCCGGC---AGGCCCATGTCCTACTCCAACACCGAGGAGTCCTTCGACGGCGGCAAGACCGTGTACTCCACCAC
CACCGAGGAGTGCTACGACGCTGGCAAGCTCGGCCATGGTAC------------CGGCTACGGCCAGGGTCAGAGCTATG
GCAATGGTGGGACCAACATGTACTCCAACAACACTGGCG---------TC---------GACTCCAGCATGTACG-----
-GGCATGGCGGCGGCGGCGGTGGCAGGACCGTGTACACCACCACCAC---CGAC---GAGTGCTTCGACTCCGTCAGGCC
CGGGTATGGGCAGGG------------CCACGGCTACGGGCACAACAACGGTGGGGCCATGCCGTA---CACC------A
CCAC------CACCACCGAGTCCTTCGGCGGAGGCGAGCAGGGGCAGGGGTACTACAAGAAGGAGGTGACGCAGCACAAG
AACAGGGAGCGCGTCGGCGAGGCCGGCGCCCTCGCCGCCGGT--------------------------------------
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>chr3D_747
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------------------------AAAGAGAAAAAACAACTTGATGAGACGAATCTTTGCAA-TTTTGCATATCAAGGC-
---TGTGTATATAACACCAGTCGGCAGCGACAAAACGATGCTCAACTGT-----------A-GT--CACAAATTGAGATT
CCAATAATAGAGGCGATCATGGAATAA-----TTAGCTTTCCTCTCCAATTCATCTCCACCGTCCATATTCGCTGTCACT
--CGCCAGTCGCCACGC-TATAAATAGGCCCCT-TCCACGGCACATTTGTG-------ACAGCCAAGCAAGCAA----GC
AAGCATCAACAC--------------------------------------------------------------------
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------GTACGAGTATCCATCACACT---AGCTAGCTTAGC-TCACCATCCGCTCTT-----AGAATGGCGGCCTACTAC
A---ACGGCGGC---AGGCCCATGTCCTACTCCAACACCGAGGAGTCCTTCGACGGCGGCAGGACCGTGTACTCCACCAC
CACCGAGGAGTGCTACGACGCTGCCAAGCTCGGCCATGGTAC------------CGGCTATGGCCACGGTCAGAGCCATG
GCAATGGCGGGACCAACATGTACTTCAACAACACTGGGG---------TC---------GACTCCAGCATGTACG-----
-GGCAT---GGCGGCGGCGGTGGCAGGACCGTGTACACCACCACCAC---CGAC---GAGTGCTTCGACTCCGTCAGGCC
CGGGTATGGGCAGGG------------TCACGGCTACGGGCAGAACAACGGTGGGACCATGTCGTA------C------A
CCAC------CACCACCGAGTCCTTCGGCGGAGGCGACCAGGGGCAGGGGTACTACAAGAAGGAAGTGACGCAGCACAAG
AATATGGAGCGCGTCGGCGAGGCCGGCGCCCTCGCCGCCGGT--------------------------------------
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>chr3B_747
AACAGG--------------------------------------------------------------------------
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-------------------------------GACAACAACTTGATGAGACGAATCTTGGTAA-TTTTTCATATCAAGGC-
---TATGTATATAACACCTGTCGGCAACAACAAAATGATGCTCAACTGT-----------A-GT--CAGAATTTGAGATT
CCAATAATAGAGGCGATGATG----AA-----TCATCTTTGCTCTCCAATTCATCTCCACCGTCCATCTTCGCTGTCACT
--CACCAGTCGCCACGCTTATAAATACAACCCT-TCCACCGCACATTTGTG-------ACAGCCAA------------GC
AAGCATCAACAC--------------------------------------------------------------------
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------GTACCGGTACGCAGCACACA---AGCTAGCTTAGC-TCACCATCTGCTCTT-----AGAATGGCGGCCTACTAC
A---GCGCCGGC---AGGCCCATGTCCTACTCCAACACCGAGGAGTCCTTCGACGGCGGCAAGACCGTGTACTCCACCAC
CACCGAGGAGTGCTACGACGCCGGCAAGCTCGGCCATGGTAC------------CGGCTACGGCCACGGTCAGAGCCATG
GCAATGGCGGGACCAATATGTACTCCAACAACACTGGCG---------TC---------GACTCCAGCATGTACG-----
-GGCATGGCGGCGGCGGCGGTGGCAGGACCGTGTACACCACCACCAC---CGAC---GAGTGCTTCGACTCCGTCAGGCC
CGGGTATGGGCAGGG------------CCACGGCTACGGGCACAACGACGGTGGGGCCATGCCGTA---CACC------A
CCAC------CACCACCGAGTCCTTCGGCGGAGGCGAGCAGGGGCAGGGGTACTACAAG---GAGGTGACGCAGCACAAG
AACAGGGAGCGCGTCGGCGAGGCCGCCGCCCTCGCCGCCGGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3B_747
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AAAGAGATATAACAACTTGATGAGACGAATCTTGGAAA-TTTTGCATATCAAGGC-
---TATGTATATAACGCATGTCGGCAGCGACAAAACGATGCTCAACTGT-----------A-GT--CCCAAATTGAGATT
CCAATAATAGAGGCGATCATGGAATAA-----TCAACTTTGCTCTCTAGTAAATCTCCACCGTCCATCTTCGCAATCACT
--CACTGGTCGCCACGC-TATAAATACGCCCCT-TCCACGGCACATTTGTG-------ACAGCCAAGCAAGCAA------
--GCATCAACAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GG-CCAGTATCCATCACAC------------TAGC-TCGCCATCCGCTCTT-----AGAATGGCGGCCTACTAC
A---ACGGCAGT---AGGCCCATGTCCTACTCCACCACCGAGGAGTCCTTCGACGGCGGCAGGACCGTATACTCCACCAC
CACCGAGGAGTGCTACGACGGTGGCAAGCTCGGCCATGGTAC------------CGGCTACGGCCACGGTCAGAGCCATG
GCAATGGCGGGACCAACATGTACTCCAACAACACTGGCA---------TC---------GAGTCAAGCATGTACG-----
-GGCATGGCGGCGGCGGCGGTGGCACGACCGTGTACACCACCACCGC---CGAC---GAGTGCTTCGACTCCGGCAGGCC
CGGACATGGGTACGG------------CCAGGGCTACGGGCAGAACGACGGTAGGGCCATGTCGTACACCACC------A
CCAC------CACCACCGAGTCCTTCGGCGGAGGCGAGCAGGGGCAGGGGTACTACAAGAAGGAGGTGACGCAACACAAA
AACAGGGAGCGCATCGGCGAGGCCGGCGCCCTCGCCGCCGGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3A_750
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GAGAGAAAACCACTTGATGAGACGAACCTTTGCAA-TTTTGCACATCAAGGC-
---TGTGTATATAACACCAGTCGGCAGCGACAAAACGATGCTCAACTGT-----------A-GT--CACAAATTGAGATT
CCAATAATAGAGGCGATCATGGAATAA-----TTAGCTTTCCTCTCCAATTCATCTCCACCGTCCATCTTCGCTATCACT
--CGCCAGTCGCCACCC-TATAAATAGGCCCCT-TCTACGGCACATTTGTG-------ACAGCCAAGCAAGGAA----GC
AAGCATCAACAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTACGAGTATCCATCACACT---AGCTAGCTTAGC-TCACCATCCGCTCTT-----AGAATGGCCGCCTACTAC
A---ACGGCGGC---AGGCCCATGTCCTACTCCAACACCGAGGAGTCCTTCGACGGCGGCAGGACCGTGTACTCCACCAC
CACCGAGGAGTGCTACGACGCTGGCAAGCTCGGCCATGGTAC------------CGGCTATGGCCACGGTCAGAGCCATG
GCAATGGCGGGACCAACATGTACTTCAACAACACTGGGG---------TC---------GACTCCAGCATGTACG-----
-GGCATGGCA---GCGGCGGTGGCAGGACCGTGTACACCACCACCAC---CGAC---GAGTGCTTCGACTCCGTCAGGCC
CGGGTATGGGCAGGG------------TCACGGCTACGGGCAGAACAACGGTGGGACCATGTCGTA------C------A
CCAC------CACCACCGAGTCCTTCGGCGGAGGCGACCAGGGGCAGGGGTACTACAAGAAGGAGGTGACGCAGCACAAG
AATATGGAGCGCGTAGGCGAGGCCGGCGCCCTCGCCGCCGGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3A_757
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AACAACTTGATGAGGCGAATCTTAGTAA-TTTTGCAGATCAAGGC-
---TATGTATATAAAACCTGTCGGCAGCGACAAAATGATGCTCAACTGT-----------A-GT--CACAAATTGAGATT
TCAATACTAGAGGTGACGATG----AA-----TCATATTTGCTCTCCAATTCATCTCCACCGTCCATCGTCGCTGTCACT
TACACCAATCGCCACGC-TATAAATACACCCCT-TCCACGGCACATTTGTG-------ACAGCCAAGCAAGCAA------
--CCATCAACAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTACCAGTATCCAGCACACT---AGCTAGCTTAGC-TCACCATCTGCTCAT-----AGAATGGCGGCCTACTAC
A---CCGGCGGC---AGGCCCATGTCCTACTCCAACACCGAGGAGTCCTTCGACGGCGGCAAGACCGTGTACTCCACCAC
CACCGAGGAGTGCTACGATGCTGCGAAGCTCGGCCATGGTGC------------CGGCTACGGCCACGGTCAGAGCTATG
GCAATGGCGGGACCAACATGTACTCCAACACCACTGGCG---------TC---------GACTCCAGCATGTACG-----
-GGCATGGCGGCGGCGGCGGTGGCAGGACCGTGTACACCACCACCAC---CGAC---GAGTCCTTCGACTCCATGAGGCC
CGGGCATGGGCAGGG------------CCACGGCTACGGGCAGAACAACGGCGGGACCATGGCGTA------C------A
CCAC------CACCACCGAGTCCTTCGGCGGAGGCGAGCAGGGCCAGGGGTACTACAAGAAGGAGGTGACGCAGCACAAG
AACAGGGAGCGCGTCGGCGAGGCCGGCGCCCTCGCCGCCGGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3D_881
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CAATAATAGAGGGGATAATCGAATCT-----TGCTTTTGC-------ACCAATCCTCACCGTCCATCTTCTCCTGTCAC
--TGTCACTCGCCACGC-TATAAAGACACCCGT-CCT-CCAAACATTTGCT-------ACGAGCAAGCAAGCAA------
--GAAGCCACAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTACTCGCATCCATCACACT---AGCTTGCTTAGCATCGCCACCTGCTCTT-----AGAATGGCGGGCTACTAC
A---ACGGCGGCGGCAGGACCATGTCCTACTCCAACAACGATGAGTGCTTCGATGGCGGCAGGACGATGTACTCCAACAC
CACCGACGACTGCTACGACGCCGGCAAGCACGGGCACGGG------------------------CACGGGCATGGCCATG
GCCATGGCGGGGCAAACATGTACGCTAACACCACTGACG---------TGGAGTGCTTCGA---------GGACTCCGGC
AGGCACGGCTACGGTGGTGGCGGCAGGACCATGTACTCCAACACCGT---CGACGAGGAGTGCTTCGACTCCGGCAGGCA
CGGGCATGGGCACGG------------CCACGGCTACGGGCACAACGACGGTAGGGCCATGTCCTA------CT---CCA
CCAC------CACCGAGGAGTGCTTCGGCGGAGGCGAGCAGGGCCAGGGGTACTATAAGAAGGAGGTGAAGCAGCACAAG
AACAGGGAGCGCGTCGGCGAGGTCGGCGCACTCGCCGCCGGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3A_881
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CAATAATAGAGGGAATCATGGAATCT-----T---CCACGTCCG----CCAAACCTCACCGTCCATCTTCTCCGGTCAC
--TTTCACTCGCCGCGC-TATAAATACACCC---TCCTCAGCACATTTGCA-------ACAAGCAAGCAAGCAA------
--GCAGCCACAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTACCGGCGTTGATCACATT---AGCTTGCTTAGCATCACCACCTGGTCTT-----AGAATGGCGGCCTACTAC
A---ACGGCGGC---AGGACCATGCCCTACTCCAACACCGACGAGTGCTTCGACGGTGGCAGGACCATGTACTCCAACAA
CACCGACGACTGCTACGACGCTGGCAAGCACGGCCACGGG------------------------CACGGGCAGGGCCATG
GCCATGGCGGGGCAAACATGTACGCTAACACCACTGACG---------TG---------GAGTGCTTCCAGGACTCCGGC
AGGCACGGCTACGGTGGTGGCGGCAGGACCATGTACTCCAACACCGT---CGACGAGGAGTGCTTCGACTCCGGCAGGCA
CGGGCATGGGCACGG------------CCACGGCTACGGGCACAACGACGGTAGGGCCATGTCCTA------CT---CCA
CCAC------CACCGAGGAGTGCTTCGGCGGTGGTGAGCAGGGGCAGGGGTACTACAAGAAAGAGGTGAAGCAGCACAAG
AACAGGGAGCGCGTCGGCGAGGTCGGCGCCCTCGCCGCCGGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr1D_1843
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GAGTAAATTGCTCAAAACTACCACATGTGTGGCTAGGGTA
CTCCAAACTATTTTTTTTTTGC---CAAAAATCACAAAATACCACCGCTTCTGCGCCAAGTGGATAACAAATAGCACTAA
TTCGAAATTGAGCGCGTCTAATAGCAGAACTGACGGGTGGGACCCATCTGTCCAGGCTGATGTGGCGAAGACTAGTCCTA
GTCAATCATTGACCTGCTGAGGTGGACGGGGATCCCACCTGTCAGCCACACAC-----------------------CTCT
TGTCTCCTCCCCTTCTTCCTTCCCATCGGAGCGGCGGCCATGGAAGAACAGCGGCGGCGGCTGACCCTGCCCGCACCGGC
GAGGCCGAACC--------CCCGCGCCCCAGCATCCTCCGGCTAGGCCGAGCCTCCCGCGCGAGCCCCTCCC-GCTCCGG
CAAGGCCGAAGCCCT-CGTGCCCGCGCTCCTGCCAGCTCCAGCAAGGCCAAGCCC-------------------------
-------------------GCATGCCCGCACCCCTGCCCG------CTCTGGCGAGGCCGAGGCCCTGC--GCCCTGCCC
GC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>SNPs
-------------------------S---S-S--S------------S-----S--------------------------
----------S----S--------S---------S------------------S-------------SS------S----
-----------S--------------S-S-SSSSS-------------SS----------------------S-------
--------------------------S-----------------------------------------------------
--------S-S----------S-S-S-----S---------------S--------------------------------
-SS--SS-----S------------------------S-----------S--S--------S-----S-SSSSSSSSSSS
S----------S-----------------S----S--S------------------------------------------
--S---------------------------------S--------------S-----------------S--S-------
-----S---------------------SSS--------------------------------------------------
----------------------------------------------S---------------------------------
-------SSSSSSSSSSSSSSSSS--S----------------------------------------------S------
-------------------------------------------------------S------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
-----------------------------------------S------------S-------------------------
----------------------------------------------------S---------S-----------------
------------------------------------S----------------------------------S--------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
------------------------------S----S------S-------------------------------------
----S--------------S---------------S----S-----------------S---------------------
-------------------S---------S-----------------S--------------S-----------------
--------------------SSSSS-------------------------------------------------------
---------------------S-------------------------S---S----------------------------
---------------S------------------------------------------------------S----S----
---------------S-----------------------------------S----------------------------
-----S-----------------------------------------S---------------------S--S-------
-------S-------------------------S------------------------S-------S-------------
S--SS----S-S----------------------------------------S---------------------------
---S--S----S------S--------S---------S--S--S-----------S---------------S--------
-------S-----S---------S-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------
--------------------------------------------------------------------------------
-------------------------S---S-------------S------S------S--------------S-------
------S-------------------S---------S-SS----------------------S-----------------
-------------SS--------S-S----S------SS-----SSSSSSSS
>forward_172
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTTGAAGG
AAGGGCGTGTGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_4645
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CTTTTTGAGAGCCCCCGAGT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>forward_3912
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ACGTGCTCTTAGAATGGCGT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_4932
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GCAGGTTGATGTGGCGAAGA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
