>input_sequence_67966
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-------------------------------------------ATGTCAGATGCAGCTAATTGCGGAGGGGACCCGTGTG
GTGAGAAACTACAGATCCCTCCAGACTTACCAAGTGATGATTCAGCAGAGAGTGCTCTTCGAGAGTCATGTCCAGCAGCA
ACATCTCGTATGTCTGTCAAGCACGTGGTTGAGGTTATCCGGTCATTCAACGAGTACAAACGGTTTCTTGTTACAAGTAT
TGGTTTTGGTGGCATGCTCGACCTCCAGATGCTTCAGACATTGAACCTAAAATTCAGCGCTTGGACAATGAGCAAGGTCA
GCACTAGCCGCCGTGCAATTGTCCTGGCTGCTAACAAGGTACTGAAATTCTGGCCAGAGGATGTTCACAAGGTTTTTGGG
ATCCCGTGCGGGCATCGCAACATAAAGGGCCGTGATGGTCACATCAAGCCGGAGGCGGTTCAGTTCATAAAGACCGCATT
GGGAATGGACAAGAAGGGGCTTCACAGCCTGCGTGCAGTGGAAGATTTCCTCAGGAGGGACATATCTGAATCATCAAGCA
AGCTAGAGAAGGACTGCTTCCAAATTGCCTTTGTTATTTTCGTGATGGGCCATGTTCTAGCACCGACCACAAAGCATGAT
TATGCCACTATCGATTTCTGGGGGGCTCTAGCTGACACCGAGACGATATCCCAGTTCAATTGGTGTGAGTATGTGATTCA
AGCTATGCTAGCTGGGGTTAAGAGGCTGAAGAATGACATCCGTTCAGGCAACCCCGTCAGTAACTTAGTAGGATGCCATT
TTTTCCTGCAGGTAGCACAAGTGTTTCAGCACATGCATCATTTAAACCATATTTACCTTTAA------------------
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>chr7D_1_TraesCS7D01G465200
AGCAGAGTGCTTAGGCTGCCTGCCATGAGTCATGTAATGGGGCGTTTAGTTAAGTCCATAGTCCACTAGTTCCACGAATT
TATTATGTTCGTTGCGTTGTACTGGGACGAGCCTCTTTTGTTTTTTTGCTGTTATGGTCACTGTGACGGTCATTGTCATT
TTGTTGTAATGCAATCAAGGGCTATGAATTATTATATATTTGGTGACACCTATGGTCATGTTCATCTTTTGTATGAAAAT
GTCACGTGCAATTTTTTAAGGCCCGTGTCGTCTATATTTTAAGCGGGACAAGCTCCCGCATTATTTTCTTAATTGCCCAT
GTGTAGTCTCATCAATGGAAGCCATATTATTTTTTATTTAGCGGGGCCAGCTGTTCACGCTGCCGCCCACTGCGGCCGAA
CCCGTGACCACTTTCCTGTACACTCCCACCGCTGAGCTCTTTGTCATCTCTCTCTCTTTCCTTCTCATTCAGATCTTCTT
CTTCCTTTCTCCAGCGACCGGGAAGACTCTCCTTCGAACAGCTCGGCGGCCACCCCCCTCGCCCGCAGCGTTGATCGGCG
TCAAGATCGGCCTCTCATCCAGGTCCGCCCTCATCCACATCATTTTT-CCCCGTCATGCGCTGTCAGTCATGCAAGTCCC
TAGTGGGATCTATTCGATTATTAGACCCATTGTTGTTCAAGATCCAAGAGCTCGTAAGGTCAGCTGACTAGA-CTTTTTC
CTCTGCTTT-GTCCATACCATGCGTAGCTCCACTCATGTACTGGGTTGCAGAGATAAATCTGATTCCATTACCATCTCAA
TTTGTTCACTATTAGTTTGTTTTACTTAATACAGATCTATTAGTGTACTGGCTTCAGTTATTAAATCGCAATTTATAGTA
CTATCCATTCTAAGTTCTAGAAGATCATTTGAATCAGCTAAATGTTCTTTACTGAATATTGGACTGAGTTTCCTTTTGCA
CGGCTCCCATTTTAATTTTTAGGTTAATGTTTGCAGGACAAACATGTCAGATGCAGCTAATTGCGGAGGGGACCCGTGTG
GTGAGAAACTACAGATCCCTCCAGACTTACCAAGTGATGATTCAGCAGAGAGTGCTCTTCGAGAGTCATGTCCAGCAGCA
ACATCTCGTATGTCTGTCAAGCACGTGGTTGAGGTTATCCGGTCATTCAACGAGTACAAACGGTTTCTTGTTACAAGTAT
TGGTTTTGGTGGCATGCTCGACCTCCAGATGCTTCAGACATTGAACCTAAAATTCAGCGCTTGGACAATGAGCAAGGTCA
GCACTAGCCGCCGTGCAATTGTCCTGGCTGCTAACAAGGTACTGAAATTCTGGCCAGAGGATGTTCACAAGGTTTTTGGG
ATCCCGTGCGGGCATCGCAACATAAAGGGCCGTGATGGTCACATCAAGCCGGAGGCGGTTCAGTTCATAAAGACCGCATT
GGGAATGGACAAGAAGGGGCTTCACAGCCTGCGTGCAGTGGAAGATTTCCTCAGGAGGGACATATCTGAATCATCAAGCA
AGCTAGAGAAGGACTGCTTCCAAATTGCCTTTGTTATTTTCGTGATGGGCCATGTTCTAGCACCGACCACAAAGCATGAT
TATGCCACTATCGATTTCTGGGGGGCTCTAGCTGACACCGAGACGATATCCCAGTTCAATTGGTGTGAGTATGTGATTCA
AGCTATGCTAGCTGGGGTTAAGAGGCTGAAGAATGACATCCGTTCAGGCAACCCCGTCAGTAACTTAGTAGGATGCCATT
TTTTCCTGCAGGTAGCACAAGTGTTTCAGCACATGCATCATTTAAACCATATTTACCTTTAATTATGGCTAACTAATGTA
TTCCATTCATTTTTTACAGATTTTCGTTCTGGACAACCTCGATCTGGGAATCTTCAACAAGCATCATTCTGTTCTGCCCA
GGGTCAAGGAGTTTGATCAAAAGTCAGTCTGCAATATGATAACACAGGCTACTGATGTTGGCAAGGGAACCACGTCCTAT
GCCAGCGCTATGGTGAGTCTCTGTTATATGCCATTTTCCATTTTTGTATGCATGCAAGTTATTCTCCTTTATTTTAATGA
CAATTCCATGGCTTTTCTGAAGCTACGCGACCACTCAACTATGTGTTACGAGCGATCAAAGTATCCTGTCCTCGAGCTGT
CAGAGTCCAGAAATACGACTTTTTCTCCGATGCAGCCAAGCTTGTCTTGTGGTGCTACCGCTAGCGCGACATCTGCGAGG
GACGCACCTACCTCAGCCCAAAAACATAATCTCATTACTGAAATGACGCCGACGACTATACGACTACTAGGGCCCATGGA
TTTCTCAAATTACCTACATAGGCAGTACCCGCAACTGGTTAGTTGTCATTTTTTATGTGTTCGTCCGTACCGGTTCCTGC
TCACATGCATCAACATTAGTCACAAGGTTTGTTGTTGCTGACTCCATCTCATGCTTCAGGCCAACGATGAAACCACTGTT
CTTCTGAAGGAAGTCAATGCTCGCTGCATATCGCACCTAACAACTGCACGTGGCCACATCCAGCTCGAGATGATGAAGTT
TGCCGACAAGCTTTATGCTGCCCGCCCCCGCACCTGCACATGTTGTGCAGCGCGTGACTATGACGAGTGCC-ACCCAGAG
CTCCCACTGCTCCCAATGGTACCTCCTCCTTCAGCACATCCATTTTTCCGTTCTCCATGTATGTACTATAATTTACGCCC
C-CTCATCACCAGCAGTTAATGTGATGAGAACGCCAGCGAGAAATGTCATTCAGGGCCACCGACTCAACCTATCTCCATG
TGAAGGTAACCTCGCCCACCCGTT
>chr1D_1
AGCAGAGTGCTTAGGCTGCCTGCCATGAGTCATGTAATGGGGCATTTAGTTAAGTCCATAGTCCACTAGTTCCATGAATT
TATTATGTTCGTTGTGTTGTACTGGGACGAGCCTCTTTTATTTTTTTGCTGTTATGGACACTGTGACGGTCATTGTCATT
TTGTTGTAATGCAATCAAGGGCTATGAATTATTATATATTTGGTGACACCTATGGTCATGTTCATCTTTTGTATGAAAAT
GTCACGTGCAATTTTTTAAGGCCCGTGTTGTCTATATTTTAAGCGGGATAAGCTCCCGCATTATTTTCTTAATTGCCCAT
GTGTAGTCTCATCAATGGAAGCCATATTA-TTTTTATTTAGCGGGGCCAGCTGTTCACGCTGCCGCCCACTGCGGCCGAA
CCCGTGACCACTTTCCTATACACTCCCACCGCTGAGCTCTTTGTCATCTCTCTCTCTTTCCTTCTCATTCAGATCTTCTT
CTTCCTTTCTCCAGCGACCGGGAAGACTCTTGTTCGAACAGCTCCGCGGCCACCCCCCTCGCCCGCAGCGTTGATCGGCG
TCAAGATCGGCCTCTCATCCAGGTCCGCCCTCATCCACATCATTTTT-TCCCC-------------GTCATGCAAGTCCC
TAGTGGGATCTATTCGATTATTAGACCCATTGTTGTTCAAGATCCAAGTGCTCGTAAGGTCAGCTGACTAGA-TTTTTTC
CTCTGCTTT-GTCCATACCATGCGTAGCTCCACTCATGTACTGGGTTGCAGAGATAAATCTGATTCCATTACCATCTCAT
TTTGTTCACTATTAGTTTGTTTTACTGAATACAGATCTATTAGTGTACTGGCTTCAGTTATTAAATTGCATTTTATAGTA
CTATCCATTCTAAGTTCTAGAAGATCATTTGAATCAGCTAAATATTCTTTACTGAATATTGGGTTGAGTTTCCTTTTGCA
CAGCTCCCATTTTAATTTTTAGGTTAATGTTTGCAGGACAAACATGTCGGATGCAGCTAGTTGCGGAGGGGACCCGTGTG
GTGAGAACCTACAGATCCCTCCAGACTTACCAAGTGATGATTCAGCAAAGAGTGCTCTTCCATAGTCATGTCCAGCAGCA
ACATCTCGTATGTCTGTCAAGCACGTGGTTGAGGTTATCCGGTCATTCAACGAGTACAAACGGTTTCTTGTTACAAGTAT
TGGTTTTGGTGGCATGCTCGACCTCCAGATGCTTCAGACATTGAACCTAAAATTCAGCGCTTGGACAATGAGCAAGGTCA
GCACTAGCTGCCGTGCAATTGTCCGGGCTGCTAACAAGGTACTGAAATTCTGGCCAGAGGATGTTCACAAGGTTTTTGGG
ATCCCATGCGGGCATCGCAACATAAAGGGCCGTGATGGTCACATCAAGCCGGAGGCGGTTCAGTTCATAAAGACCGCATT
GGGAATGGACAAGAAGGGGCTTCACAGCCTGCGTGCAGTGGAAGATTTCCTCAGGAGGGACATTTCTGAATCATCAAGCA
AGCTAGAGAAGGACTGCTTCCAAATTGCCTTCGTTATTTTCGTGATGGGCCATGTTCTAGCACCGACCACAAATCATGAT
TACGCCACTATCGATTTCT-GGGGGCTCTAGCTGACACCGAGACGATATCCCAGTTCAATTGGTGTGAGTATGTGATTCA
AGCTATGCTAGCTGGGGTTAAGAGGCTGAAGAATGACATCC-TTCAGGCAACCCCGTCAGTAACTTAGTAGGATGCCATT
TTTTCCTGCAGGTAGCACAAGTGTTTCAGCACATGCATCATTTAAACCATATTTACCTTTAATTACGGCTAACTAATGTA
TTCCATTCATTTTTTACAGATTTTCGTTCTGGACAACCTTGATCTGGGAATCTTCAACAAGCATCATTCTATTCTGCCCA
GGGTCAAGGAGTTTGATCAAAAGTCAGTCCGCAATATGATAACACAGGCTACTGATGTTGGCAAGGGAACCACGTCCTAT
GCCAGCGCTATGGTGAGTCTCCGTTATATGCCATTTTCCATTTTTGTATGCATGCAAGTTATTCTCCTTTATTTTAATGA
CAATGCCATGGCTTTTCTGAAGCTACGCGACCACTCAACTGTGTGTTACGAGCGATCAAAGTATCCTGTCCTCGAGCTGT
CAGAGTCCAGAAATACGGCTTTTTCTCCGATGCAGCCAAGCTTGTCTTCTGGTGCTACCGCTAGCACGACATCTGCGAGG
GACGCACCTACCTCAGCCCAAAAACATAATCTCATTACTGAAATGACGCCGACGACTATACGACTACTAGGGCCCATGGA
TTTCTCAAACTAGCTACGTAGGCAGTACCCGCAACTGGTTAGTTGTCATTTTT-ATGTCTTCGTCCGTACCGGTTCCTGC
TCACATGCATCATCATTAGTCACAAGGTTTGTTGTTGCTGACTCCATCTCATGCTTCAGGCCAACGATGAAACCACTGTT
CTTCTGAAGGAAGTCAATGCTCGCTGCATATCGCACCTAACAACTGCACGTGGCCACATCCAGCTCGAGATGATGAAGTT
TGCCGACAAGCTTTATGCTGCCCGCCCCCGCACCTGCACATGTTGTGCAGCGTGTGACTATGACGAGTGCCCACCCAGAG
CTCCCACTGCTCCCAATGGTACCTCCTCCTTCAGCACATCCATTTTTCTATTCTCCATGTATGTACTATAATTTACG-CC
C-CTCATCACCAGCAGTTAATGTGATGAGAACGCCAGCGAGAAATGTCATTCACGGCCACCGACTCAACCTATCTCCATG
TGAAGGTAACCTCGCCCACCCGTT
>chr7D_39
--------------------------------------GGGGCGTTTAATTAAGTCCATAGTCCACTAGTTCCTCTAATT
TATTATGTTCGTTGCGTTGTACTGGGACGAGCCTCTTCTGTTTATTTGCTATTATGGTCACTGTGACGGTCATTGTCATT
TTGTTGTAATGCAATCAATGCCTATGAATCATTATATATTTCGTGACACCTATGGTCATGTTCATCTTTTGTATGAAAAT
GTCACGTGCAATTTTTTAAGG---------------------------------CCCGCATTATTTTCTTAATTGCCCAT
GTGTAGTCACATCAATGGAAGCCATATTATTTTTTATTTAGCGGGGCCAGCTGTTCACGCTGCCGCCCACTACGGCCGAA
CCCGTGACCACTTTCCTGTACACTCCCACCGCTCAGCTGTTTG---TCTCTCTCTCTTTCCTTATCATTCAGATCTTCTT
CTTCCTTTCTCCAGCGACCGGGAAGACTCTGCTTCGAACAGCTCGCCGGCCACCCCCCTCGCCCGCAGCGTTGATAGGCG
TCAAGATCGGCCTCTCATCCAGGTCCGCCCTCATCCACATCATTTTTCCCCCGTCATGCGCTGTCAGTCATGCAAGTTCC
TAGTGGGATCTATTCGATTATTAGACCCATTGTTGTTCAAGATCCAAGAGCTCGGAAGGCCAGCTGACTAGATTTTTTTC
CTCTGCTTTTGTCCATACCATGCGTAGCTCCAGTCATGTACTGGGTTGCATAGATAAATCTGATTCCATTACCATCTCAT
TTTGTTCACTATTAGTTTGTTTTACTGAATACAGATCTATTAGTGTACTGGCTTCAGTTATTAAATCGCAATTTATAGTA
CTATCCATTCTAAGTTCTAGAAGATCATTTGAATCAGCTAAATGTTCTTTACTGAATATTGGGCTGAGTTTTCTTTTGCA
CAGCTCCCATGTTAAATTTTAGGTTAATGTTTGCAGGACAAACATGTCGGATGCAGCTAGTTGCGGAGGGGACCCGTGTG
GTGAGAACCTACAGATCCCTCCAGACTTACCAAGTGATGATTCAGCAGAGAGTGCTCTTCCAGAGTCATGTCCAGCAGCA
ACATCTCGTATATCTGTCAAGCACGTGGTTGAGGTTATCCGGTCATTCAATGAGTACAAATGGTTTCTTGTTACAAGTAT
TGGTTTTGGTGGCATGCTCGACCTCCAGATGCTTCAGACATTGAACCTAAAATTCAGCGCTTGGACAATGAGCAAGGTCA
GCACTAGCCGCCGTGCACTTGTCCTGGCTGCTAACAAGGTACTGAAATTCTGGCCAGAGGATGTTCACAAGGTTTTTGGG
ATCCCGTGCGGGCATCGCAACATAAAGGGCCGTGATGGTCACATCAAGCCGGAGGCGGTTCAGTTCATGAAGACCGCATT
GGGAATGGACAAGAAGGGGCTTCATAGCCTGCATGCAGTGGAAGATTTCCTCAGGAGGGTCATTTCTGAATCATCAAGCA
AGCTAGAGAAGGACTGCTTCCAAATTGCCTTTGTTATTTTTGTGATGGGCCATGTTCTAGCACCGACCACAAAGCATGAT
TACGCCACTATCGATTTCTGGGGGGCTCTAGCTGACACCGAGACGATATCCCAGTTCAATTGGTGTGAGTATGTGATTCA
AGCTATGCTAGCTGGGGTTAAGAGGCTGAAGAATGACATCCGTTCAGGCAACCCCGTCAGTAACTTAGTAGGATGCCATT
TTTTCCTGTAGGTAGCACAAGTGTTTCAGCACATGCATCATCTAAACTATATTTACCTGTAATTACGGCTGACTAGTGTA
TTCCAATCATTTTTTACAGATTTTCGTTCTGGACAACCTCGATCTGGGAATCTTCAACAAGCATCATTCTGTTCTGCCCA
GGGTCAAGGAGTTTGATCAGAAGTCAGTCCGCAATATGATAACACAGGCTACTGATGTTGGCAACGGAACCACGTCCTAT
GCCAGCGCTATGGTGAGTCTCCATTATATGCCATTTTAAATTTTTGTATGCATTCAAGTTATTCTCCTTTATTTTAATGA
CAATGCCATGGCTTTTCTGAAGCTACGCGACCACTCAACTGTGTGTTACGAGCGATCAAAGTATCCTGTCCTCGAGCTGT
CAGAGTCCAGAAATACTGTTTTTTCACCGATGCAGCCAAGCTTGTCTTGTGGTGCTACCGCTAGCGCGACATCTGCGAGG
GACGCACCTACCTCAGCCCAAAAACATAATCTCATTACTGAAATGACGCCGACTACTATACGACTACTAGGGCCCATGGA
TTTCTCAAACTACCTATGTAGGCAGTACCCGCATCTGGTTAGTTGACATTTTTTATGTGTTCGTCCGTACCGGTTCCTGC
TCACATGCATCATCATTAGTCACACGGTTTGTTGTTGCTGACTCCATCTCATGCTTTAGGCCAACGATGAAACCACTATT
CTTCTGAAGGAAGTCAATGCTCGCTGCATATCGCACCTAACAACTGCACGTGGCCACATCCAGCTCGAGATGATGAAGTT
TGCCGACAAGCTTTATGCTGCCCGCCCCCGCACCTGCACATGTTGTGCAGCGCGTGACTATGACGAGTGCCCACCCAGAG
CTCCCACTGCTCCCAATGGTACCTCCTCCTTCAGCACATCCATTTTTCTGTTCTCCATGTATGTACTATAATTTACG-CC
CCCTCATCACCAGCAGTTAATGTGATGAGAACGCCAGCTAGAAATGTCATTCAGGGCCACCGACTCAACCTATCTCCATG
TGAAGGTAACCTCGCCCACCCGTT
>SNPs
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----------------------------S-------------------S-------------------------------
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------------------------------S-------------------------------------------------
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-------------------------------------------------------------------------S------
-------------------------------------------------------------------------------S
--------------------------S-----------------------------------------------------
--------------------------------------------------------------S-----------------
-S----------------------------------------------S----------S--------------------
-------S----------------------------------------------------S-------------------
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---------------------------------------------------------------S----------------
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--S-----------------------------------------------------------------------------
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-----------------------------S--------------------------------------------------
---------------------S----------------------------------------------------------
----S-----------------------------------S---------------------------------------
-----------------S--------------------------------------------------------------
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---------S-------S--------------------------------------------------------------
------------S-------------------------------------------------------------------
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------------------------------------------------S----------------------------S--
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>forward_511
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------------AGCGACCGGGAAGACTCTC-------------------------------------------------
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>reverse_1603
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--TGCCACTATCGATTTCTGGGG---------------------------------------------------------
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>forward_962
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------------------------------------------------------------GGACTGAGTTTCCTTTTGCA
CG------------------------------------------------------------------------------
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>reverse_2178
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-----------------ACTTTTTCTCCGATGCAGCC-------------------------------------------
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