>input_sequence_67896
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CCATAATGATATTTATGCAAAGCTACCTGCTAG-AGAAATAATTGAAACATATCCAAAAATC
AAAGGAAAAATAGAGAAATAAAATCCAAGTCTCTTTCCCAAAAGCAAGAGGAAAAGGACAAGGAAAATTAAC-----TAG
CAACCAAAGAAAGACGAGACTAGAAA---GAGGCGAAATTAGCCAACGCGCGCGTCCATGGCAACCCAGCCACACCAATC
GTCAATGAAAATCCTACAGCGCGAGGCAGAACCGGCGAACGGGAAGATCGAGCCGGAGCTCAAGACGAAGAGGGCCGACG
CGGCGGCGTCGGC---------GGCCTTCACGGCGCTCGAGTTCGCCGCGGCCGAGCAGCTCCTCCACCTCCGCCGGAGC
AGCGCCTCCTCGGGCACCCCTCGCGCCCGCCCGGTCGCCACCTCCGTGGCTCCCTCGGGCAGCTCCTTCTCCTCCTCCCT
GCGCTCCGTGAACGCCCCGCCAGCGGCGCCGTCTCCTGGCGCCGTAATTCTTGGTGGCTGCGTGGACAGGGAGGAAGAGG
AGGAGGACCAGGTGGCCGGGAGCCAGCGAAGGGTGAAGCGCTACCGCTTGATCACTGAGATCTATGCCGCGACGGAGGAA
ATTGGGGGTCGCAGTGGCGGCAGCCG---GAAGAACAAGAAGGAATAGACAAGGAGAGATGAGAGGGGAGAGGG----AC
CT----TCTTGTAATTGACATGATTGCTAGGGTGTAGCTCGTTGTTCGAGTCTGTAGTCCTCTACTTCCTCTCGCCCGGA
GGAGGAGTCGCTATCGCTATCGATCTCGCTGTAAAAG------CTTCATCTTTGCAATAAGACTTACTTGTTGGC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5D_1_TraesCS5D01G338800
CCCCTTGTCCTTGCTAGTTACAAGATTAAAAACTAATAGATAGATAGATAATTGTGTAGTAAAATAGAAAAATAATAAAG
CAAATAAATGAAAGGAGAAAATTGTATGAAAGACTTGAATTAATAGAGAGTGGACTT--GGGACATAGGTTCACTAGAGG
TATCTCTCTAGAAAGATAGCAAACGGCGTGGT-G-ACAAACTACGGTTGGGCA------AG-------AATAGAAATCT-
----TTATGACTATGATCATTCATGACATAATCTCACATAGGCATTACATCTGTGATAAGTGAACCGTTAATCCAACAAC
ATCTACTACTAATACTCCACCCCGAAACCGCTATCTAGCATGCATCTCAAGGTATTAAGTTTATAAGAAGCAGAGCATTG
CAATAAACAAGATGACATAATGTAAAAATAAATAAATCTAGCAATATGATTGAACCATGTCGCTTTATCCTTAGTGACAA
CAATACAA-TATGTGTTTCGTCCTTATTATC----------A-GAGCACCGCGAGA--TT-GAACCCTGTACTATGCACC
ACTCCCTTTGAAAAACTAATTATCAATCTTGGCCAGAGAAGAGATATTGATCGGAAAGCATACATTGCTATTTAATTATA
CAACGAAGAAACTTCAAAAGATTCAATAATCTTGAATAGTTAGCCTGGAATAGTTAGATTTGACATACAGGACTAAGGGC
TTTGTGGAACTGATTTTCTAGTTACTGGTGTGAAGCTACCGGTGATGAGCAAAATTTAGAGTGCAACATTGTTATGTAAA
ATATT----------------------------------GTAGTGATTGTGTTTACCTAGCCGCCGTGTGAATATGCAAC
GATAACAACGAGCGTGAAACTAGACCGAAAACAAGTTACATAT-------------------------------------
----------ACCTTCAACGCGATGTGCCAATGGACGTGTTGGAC---------------AAACTCGGTTGGACGGGTTG
TGCGATGGATCAACCGGACAACGGT-----TGTCATGCGTTTCACGCCGGAATACGGCTTAACGGTAATTGCACATGTCG
GGCCAAATCGATTCGATGCCATAATGATATTTATGCAAAGCTACCTGCTAG-AGAAATAATTGAAACATATCCAAAAATC
AAAGGAAAAATAGAGAAATAAAATCCAAGTCTCTTTCCCAAAAGCAAGAGGAAAAGGACAAGGAAAATTAAC-----TAG
CAACCAAAGAAAGACGAGACTAGAAA---GAGGCGAAATTAGCCAACGCGCGCGTCCATGGCAACCCAGCCACACCAATC
GTCAATGAAAATCCTACAGCGCGAGGCAGAACCGGCGAACGGGAAGATCGAGCCGGAGCTCAAGACGAAGAGGGCCGACG
CGGCGGCGTCGGC---------GGCCTTCACGGCGCTCGAGTTCGCCGCGGCCGAGCAGCTCCTCCACCTCCGCCGGAGC
AGCGCCTCCTCGGGCACCCCTCGCGCCCGCCCGGTCGCCACCTCCGTGGCTCCCTCGGGCAGCTCCTTCTCCTCCTCCCT
GCGCTCCGTGAACGCCCCGCCAGCGGCGCCGTCTCCTGGCGCCGTAATTCTTGGTGGCTGCGTGGACAGGGAGGAAGAGG
AGGAGGACCAGGTGGCCGGGAGCCAGCGAAGGGTGAAGCGCTACCGCTTGATCACTGAGATCTATGCCGCGACGGAGGAA
ATTGGGGGTCGCAGTGGCGGCAGCCG---GAAGAACAAGAAGGAATAGACAAGGAGAGATGAGAGGGGAGAGGG----AC
CT----TCTTGTAATTGACATGATTGCTAGGGTGTAGCTCGTTGTTCGAGTCTGTAGTCCTCTACTTCCTCTCGCCCGGA
GGAGGAGTCGCTATCGCTATCGATCTCGCTGTAAAAG------CTTCATCTTTGCAATAAGACTTACTTGTTGGCCGGAG
CTGAATACATCCATGGTGGCATCTGAATTCTGAACTGAATTGGTTAATTTGGTTCGTCTTGTACTGTGGTGCTAGCTGGC
TAGGCTGGATCTCGGCCGAATCGGTC-------GCCTTTGCAGATCGATGGTCTCCACGGCGACGAGGATGATAGCTCCG
GCCATGGATCCGGCTTGGTAGC------------------GCCGCC------GATCGACGCCTGCGTCCAAGCAATTTTC
GCAATTTAGTATATGCGAGTGCGGG------TGCGATTCGCTGAAAGATCGATCGATT----CGTGAAATTCGGTGTTGT
GTTTGTTTGATTCGGGCAACGACGAGATGCAG-------TGCACTGATCTGCGAGTCCAATTTCCAGCGGAAATGTTGGT
TCCCTG------TGTGGTAGAACTTTGGTCCTGTAGATCAATAGATATGGTGC---TGGAGGCCGGAGCTGCTGGCCACT
CATCGCAGTCTCTTGCTCC-----CGCGGCGTGTGC---------------GTTCGATT------CTGCC-----TCTTC
ATACTGGTTTGGTCGATTTAGGCGAGTCCAATCTGTTGCACCCCACAGGACGGA-----TGAGGATCGAGCTGCTGGGAT
CAGAAACAATGGCGGGGGGCGAATGAAATGTTCTAGAAGCGCCTCCATGCAA---------GCGAGAGTTCCATTTCTTG
CACCCGCCTGTACGTGGTTTCCTTTCGGATTAAGCCACA------ATCAAGCTTATCATCTGAGACTACTGATCAGGCTG
CAGACAAATGTATCCTTTCTGCTGCAGGTTGTTGCAATGATCAGGTCTACGGAAATGTGATTCTCCAAGTAGAACAGTTC
GAGTTCAGAATGAGTTCGCCGGAGTTGGTGCAA---GCCAGCAACGTTTTCTTGTAACTCCACCGTCTAGCTTGGTTAAT
TTTCCTCTGATGCTGCTGCGAGACATCAGACATGC-----AAGTTCATTAAGATCGAGCTATGCATGCATGTTTTCGGCG
CCACCTGACTGTGTAAAGATACATACAGAGAGGTCGATGGGCTGTGTGAAATTAACAGGTTATATGTGCTT
>chr5D_1
CCCCTCGT-CTTACTAGTTACATAGTTAAAACCAAATAGATGGATAAATAATGGTATAATGAAATGGTAAAATAATAGAG
GC---AAATAAAAGGGAAATTTTATAGAAGCAAGT---ATTGATAGAGAATGGACCCAAGGGCCATAGGTTCATTAGTGG
CATTTCTCTCGAAAGTAGGTAA-TGGCGTGGT-ATAAAAATTACTGTTGGGCAATTGATAG-------AAAAGCAAGAT-
----TTATCACTATGATCATTCATGGCATAACCTTGTATAGGCATTGCGCCTGTGATAAGTAGACCATTATCTG-ACTGC
ATCTACTACCATTACTCCACCC-GAAAACGCTATCTAGCATGCATCTCAAGGTATTAAGTTTACTAGAAACTGAGCAACG
CAGTAAGCAAAATGAGATACTTTAGACGGAAAGAAATCTAGCAATAAGATAATTCCCCATCGGTTTATCCTTAGTAGCAA
CAATACAAATACGTGTCTTGTCCCCATTCTGTCATTGGGATGGTAGAACACTTCACAGTT-GAACCCACTAGTATGCACC
ACTTTCTCTGAAGAACTACCCATCTATTTTGGCCAAAGAAGACAAATAGATCATAAAGAATACATAGTTACTTAATTATA
CGACAAAGAAACTTCATAAGATTCAATAATATTCAAT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5A_1
CCCCTTGTCCTTGCTAGTTACAAGATTAAAAACTAATAGATAGATAGATAATTGTGTAGTAAAATTGAAAAATAATAAAG
CAAATAAATGAAAGGAGAAAATTGTATGAAAGACTTGAATTAATAGAGAATGGACTT--GGGCCATAGGTTCACTAGAGG
TGTCTTTCTTAAAAGATAGCAAGCGGCATGGT-G-ACAAATTATTGTTGGGCA------AG-------AATAGCAATCT-
----TTATGACTATGATCATTCATGACATAACCTCACATAGGCATTACATCTGTGATAAGTGAACTGTTAATCCAACATC
ATCTACTACTAATACTCCACCCCAAAACCGCTATCAAGCATGCATCTCAAGGTATTAAGTTTATAAGAAGCAGAGCATTG
TAATAAACAAGATGACATAATGTAAAAATAAATAAATCTAGCAATAAGATTAAACCATGTCGCTTTATCCTTAGTGACAA
CAATACAA-TATGTGTCTTCGTCCT-TATTATCTCTGGATTA-GAGCACCACGAGA--TT-GAAACCAGTACTATGCACT
ACTCCCTCTGAAAAACTAATTATCAATCTTGTCCAGAGAAAACAAATTAATCAGAAAGCATACGTAGCTATTTAATTATG
CAACGAAGAAACTTCAAAAGATCCAGTAGTCTTGAATAGTTAGTCTGGAATAGTTAGCTTTGACATACAGGACTAAGGGC
TTTGTGGAACTGGTGTTCTAGTTACTGGTGTGAATCTACGAGTGATGACCAAAATTTAGAGTGCAACATTGTTATGTAAA
ATAATATTAATAGGCCCGTCTCTCGTAATCATTTTTGCAGTAGTGATTGTGTCTACCTAGCCGTTGTGTGAATATGCAAC
GGTAACAACGAGCGTGAAATTAGACCCAAAACAAGTTACATGTACATATCATAGAAATGTGTAGTGTGTACATACATATG
ACGTGTAATGACCTTCAACGCGATGTGCCAATGGCTATGTGATCCATCGACGTGTTGCAAAAACTCGGTTGGACGGGTTG
TGTGCTGGATTAACCGGACAGCTCACAATGTGTCACGCATTTCACGCCGGAATATGGCTTAACGGTAATTACACGTGTCG
GGCCAAATCGATTCTATACCATAATGATATTTATGCAAAGCTACCTGCTAG-AGAAATAATTGAAAC----CCAAAAATC
AAAGGAAAAATAGAGAAATAAAATCCAAGTCTCTTTCGCAAAAGCAAGAGGAAAAGGACAAGGAAAAATAACTAGTATAG
CAACCAAAGAAAGACCAGACTAGAAA---GAGGCGAAATTAGCCAACGCGCGCGTCCATGGCAACCCAGCCACACCAATC
GTCAATGAAAATCCTACAGCGCGAGGCAGAACCGGCGAAGGGGAAGATGGAGCCGGAGCCCAAGACGAAGAGGGCCGACG
CGGCGGCGCCGGC---------GGCCTTCACGGCGCTCGAGTTCGCCGCGGCCGAGCAGCTCCTCCACCTCCGCCGGAGC
AGCGCCTCCTCGGGCACCCCTCGCGCCCATCCGGTCGCCACCTCCGTGGCTCCCTCGGGCAGCTCCTTCTCCTCCTCCCT
GCGCTCCGTGAACGCCCCACCAGCGGCGCCGTCTCCTGGCGCCGTAATTCTTGGTGGTTGCGTGGACTGGGAGGAAGAGG
AGGAGGACGAGGTGGCCGGGAGCCAGCGAAGGGTGAAGCGCTACCGCTTGATCACTGAGATCTATGCCGCGACGGAAGAA
ATTGGGGGTCGCAGTGGCGGCAGCCG---GAAGAACAAGAAGGAATAGACAAGGAGAGATGAGAGGGGAGAAGG----AC
CT----TCTTGTAATTCACATGATTGCTAGGGGGTAGCTCGTTGTTCGAGCCTGTAGTCCTCTCCTTCCTCTCGCCCGGA
GGAGGAGTCGCTATCGCTATCGATCTCGCTGTAAAAG------CTTCATCTTTGCAATAAGACTTACTTGTTGTCCGGAG
CTGAATCCATCCATGGCGGCTTCTGAATTCTCAACTGAATTGGTTAATTTGGTTCGTCTCGTACTGTGGTGCTAGCTGGC
TAGGCTGGATCTCGGCCGAATCGGTC-------GCCTTTGCAGATCGATGGTCTCCACGGCGACGAGGATGATAGCTCCG
GCCATGGATCCGGCTTGGTAGC------------------GCCGCC------GATCGATGCCTGCGTCCAAGCAATTTTC
GCAATTTAGTATATGGGAGTGCGGG------TGCGATTCGCTGAAAGATCGATCGATT----CGTGAAATTTGGTGTTGT
GTTTATTTGATTCGGGCAACGACGAGGTGCAG-------TGCACTGATCTGCGAGTCCAATCTCCAGCGGAAATGTTCGT
TCTGTT------TGTGGTAGAACTTTGGTCCTGTAGATCAATAGATATGGTAC---TGGAGGCTGGAGCCGCTGGCCACT
CATCGCAGTCTCTTGCTCCCGTCCCGCGGCCTGTGC---------------GTTCGATACAACTCCTGCC-----TCTTC
ATACTGGTTTGGTCGATTGATGCGAGTCCAATCTGTTGCACCCCACAGGACGGA-----TGATAATCGAGCTGCTGGGAT
CAGAAACAATGGCGGGGGGGCAATGGAATGTTCTAGAAGCGCCTCCATGCAAGCCGGTCGTGCGAGAGTTCCATTTCTTG
CACCCGCCTGTACGTGGTTTCCTTTCGGATTAAGCCATGATCAAGATCAAGCTTATCATCTGAGACTACTGATCAGGCTG
CAGACAAATGTATCCTTTCTGCTGCAGGTTGTTGCAATGATCAGGTCTATGGAAATGTGATTCTCCAAGTAGAACAGTTC
GAGTTCAGAATGAGTTCGCCGGAGTTGGTGCAA---GCCAGCAAG------------------CGTCTAGCTTGGTTAAT
TTTCCTCTGATGCTGCTGCGAGACATCAGACATGCACCTAAAGTTCATTAAGATCGAGCTATGCATGCATGTTTTGAGCG
CCACCTGACGGTGTAAAGATACATACAGAGAGGTCAATGGGCTGTGTGAAATTAACAGGTTATATGTGCTT
>chr7D_1
CCCCTTGTCCTTGCTAGTTTCAAGATTGAAAGCTAATAGATAGATGGATAGTTGTGTCATAAAATAGCAAAATAAATAAA
GG----------AGGAGCAAATTGTATGGAAAACTTTAATTAATAGAGAATGGG-----GGGCCAGAGGTCCACTAGAGG
TATCTCTCTCGAAAGATAGCAA-TGGCATGGT-A-AAAAATTACAATTGGGCA------ATTGACAACAATAGAGACGT-
----TTATAATTAGAATCATTCATGGCGTAATCTCACATATGCATTATGTCCGTGATAAGTAG-CCGTTACTCCATCAAC
ATCTACTACTAATACTCCACCCCGAAACCGTTATCCAGCACACATCTCAAGGTATTAAGTTTACAAGAAACAGATCATTG
CAATAAGCAAGATGACGTAATGTAGACAGAAAGAAATCTAGCAACAAGATTAAACCATGTCATTTTATCCTTAGTGGAAA
CAATACAA-TATGTATCTTTGTCCT-TATTGTCACTAGATTA-GAGCACCG--------T-GAACCCACTACTATACACC
ACTCTCTCTAAAGAACTACTCATCAATCTTGGCCAGAGAAGACAAATAGATCGGAAAGCATACATAGCTATTTAATTCTA
CAACGAAGAAAAATCAAAAGATTCAATAATATTAAAT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr2D_138
--------------------------------------------------------------------------------
-----------------------------------------------------------GGGCCATAGGTTCACTAGTGG
CATCTCTCTTAAGCAG--GCAAGTGGTGTGGTGA-ACAAATTATAGTTGGGCA------AC-------GATTAATATTGC
AATATTATGACTATAACAATTCATGGTATAATACCATATAGGAATTACATCCAGGATAAGTCGACCATTAATCCAACAAC
ATCTACTACTAATACTACACCCTAAGACTACTATCCAGCATGCATCTTGAGGTATTAAGTTTACAAGAAACAGAGCATTG
CAATAACCAAGATGACATAATGTAGACAGTAAAACATCAACCAATATGACGAGGCACTATCATTTTATCCTTAGCGTCAA
CAATAGAA-TACGTGTCTTGTCCCT-TTCTATCACTAGGATA-TAGAACACCACAAGATAAGAACCCACTACAAATCACA
ACTCCCTCTAAAAATAATGCCATCAAACTTGGCCAAAGAAGATAGATAGATCGGAGAGCATACAAAGCTATTAAATTATA
CAT--AAAAACCCTCAAAAGATTCAAT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5D_979
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GTCA
GGCCAAATCAATTCCAGGCTATACGAGCATTTATGCATAGCCACCAAAGGAAATAATTAAATATATC----CAAAAAACC
AAGGGAGAAATAGAG-AATAAAACCCAAGTCTTCCTCTCGAGAGCAAGAGG-AAAGGACAAGGAATATTAAC-----TAG
CAACCAAAGAAAGAGTAGACGAGGGAGAGGAGGCGAAATTAGCCAACGCGCGCGTCCATGGCTAGCCAGCCACACCAATC
GTCCAAGAAATTCCTACAACGCGAGGCCGCGCCGGCGAAGCGGAAGATGGGGCCGGAGCAGAAGACGAAGAAGGCCGGGG
CGGCAGCGCCGGCGGGGGCGGAGGCCTTCACGGCGCTCGAGCTCGACGTGGCCGAGCAGCTCATCCGCCTCAGCGAGAGC
AGCGCGTCCTCGGGCGGGTCCTT------------------------------------------------CTCCTGCCT
GCGTTCCGTGGACACCCCGCCGGCGCCGCCGGCTAAGGGCGCCATAATTCCTGGCGGTTGCGTGGACTGGGAGGAAGATG
AGGACGACGAGGTGGCCGGAAGGCAGCGGAGGGTGAAGCGCTACCGCCTGATAAGCGAGATCTACGCCGCGACGGAGCCA
ATTGGAGAGCGCAGCGGCAGCAGCCG---GAAGAACAAGAAGGAATAGATGAGGAGAGATGAGAGGGGAGAGGGGCCAAC
CA----TCTTGTAATTCAAGTGATTGCTAGGGGGTAGCCTGTAGTTCGAGC----AGTCCTCTCCTTGCTCTCGCCGG--
-GAGGAATCGCTATCACTTTCGATCTAGCTGTAAAAG------CTTCATCCTTGCAATAAGACTTGCTTGTTGGTTGGAG
CTGAATCCATCCATGGCGGCTTGCAAATTCTTAACTGAATTTATTTTGTTCCACAGT------------TGCTAGCTGGC
TTGGCTGGATCTCGGCCGATCGACCGATGGACGGCCTTTGCAGATGGATGGTCTCCGCGGCGGAGAGGATCAGATCAGGC
TTCCTCCTTCGATTTCGTGGTAGCTCGCGACTCGGCGCCTGCGGTCGATCAAGATCAATCCCTGCCTGCATGCAATTTTT
GAAATTAACTATTCCCTGTCGCATGACGAGCTGCGATTCACTGAAAGATCGATCGATTGATTCGTGAAATTTGGTGCTTT
GTTTATCGGATTTGGGCGCCGACGAGGTGCACTGCTGTCTGCGCTGGTTTTGGAGTCCTATTTCTAGTAGAAATGTTTAC
TCTGCT------TGTGGTAGAACTGTTGATCAGTAGAT----ATGGCTCTGCAGGGTGCAGGCCGGAGCAGCCGGCGGTT
GCAAT--GCCTTGTTCTCC-----GGCGGTCGTGCAACTCATAGTTCGACTGTTCGGTATAACACCTGCCTCTTATCTTC
ATACTGGTTTGGTCGATTTAGGCGAGTCCAATTTGCTTCCGCGGCATTGGAGTGGGGACTGAGGATCGAGCTGCTGGGTC
AGAAAC---TGGCCGGGGGCGAATGGAATGTTCTAGAAGCGCTTCCATGC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5A_1035
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GAAATAATTAAACG-TATCAAAAAAAC
AAGGGAG-AATAGAG-AATAAAACCCAAGTCTTCCTCTCAAGAGCAAGAGG-AAAGGACAAGGAATATTAAC-----TAG
CAACCAAAGAAAGAGTAGACGAGAGAGAGGAGGCGAAATTAGCCAACGCGCGCGTCCATGGCAACCCAGCCACACCAATC
GTCCAAGAAATTCCTACAGTGCGAGGCCCCCCCGGCGAAACGGAAGATGGGGCCGGAGCAGAAGACGAAGAAGGCCGGGG
CGCCAGCACTGGCGGGGAAGGAGGCTTTCACGGCGCTCGAGCTCGACGTGGCCGAGCAGCTCATCCGCCTCAGCGAGAGC
AGCGCGTCCTCGGGCGGGTCCTT------------------------------------------------CTCCTACCT
CCGTTCCGTGGACACCCCGACGGCGCCGCCGGCTAAGGGCGCCATAATTCCTGGCGGTTGCGTGGACTGGGAGGAAGATG
AGGACGACGAGGTGGCCGGAAGGCAACGGAGGGTGAAGCGCTACCGCCTGATAAGCGAGATCTACGCCGCGACGGAGCCA
ATTGGAGAGCGCAGCGGCAGCAGCCG---GAC------GAAGGAATAGATGAGGAGAAATGAGAGGGGAGAGGG----AC
CAACCATCTTGTAATTCAAGTGATTGCTAGGGGGTAGCCTGTAGTTCGAGCTAGCAGTCCTCTCCTTCCTCTCGCCGG--
-GAGGAATCGCTATCACTATCGATCTTGCTGTAAAAG------TTTCATCCTTGCAATAAGAT----TTGTTGGCTGGAG
CTGAATCCATCCACGTCGGCTTCCGAATTCTTAACTGAATTTATTTTGTTCCACAGT------------TGCTAGCTGGC
TTGGCTGGATCTCGGCCGATCGACCGATGGACGGCCTTTGCAGATGGATGATCTCCGCGGCGGAGAGGATCCGATCAGGC
TTCCTCCTTCGATTTCGTGGTAGCTTGCGACTCGGCGCCTGCGGTC------GATCAATCCCTGCCTGCATGCAATTTTT
GAAATTAACTATTCCTTGTCCCATGAGGAGCTGCGGTTCACTGAAAGATCGATCGATTGATTCGTGAAATTTGGTGCTTT
GTTTATCGGATTTGGGCGGCGACGAGGTGCACTGCTGTCTGCGCTGGTTTGGGAGTCCTATTTCTAGCAGAAATGTTTAC
TCTGCG------TGTGGTAGAACTGTTGATCAGTAGAT----TTGGCTCTGCAGGGTGCAGGCCGGAGCAGCCGGCGGTT
GCAAT--GTCTTGTTCTCC-----GGTGGTCGCGCAACTCATAGTTCGACTGTTCGGTATAACACCTGCCTCTTATCTTC
ATACTGGTTTGGTCGATTTAGGCGAGTCCAATTTCCTTCCGCAGCATTGGAGTGAGGATTGACGATCGAGCTGCTGGATC
AGAAAC---TGGCCGGGGGCGAATGGAATGTTCTAGAAGCGCTTCCATGC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5B_1140
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CCAAAGAAAGACGAGACTAGAAA---GAGGCGAAATTAGCCAACGCGCGCGTCCATGGCAACCCAGCCACACCAATC
GTCAATGAAAATCCTACAGCGCGAGGCAGAACCGGCGAAGGGGAAGATGGTGCCGGAGCCCAAGACGAAGAGGGCCGACG
CGGCGGCGCCGGC---------GGCCTTCACGGCGCTCGAGTTCGCCGCGGCCGAGCAGCTCCTCCACCTCCGCCGGAGC
AGCGCCTCCTCGGGCGCCCCTCGCACCCGCCCGGTCGCCACCTCCGTGGCTCCCTCGGGCGGCTCCTTCTCCTCCTCCCT
GCGCTCCGTGAACGCCCCGCCGGCGGCGCCGTCTCCTGGCGCCGTAATTCTTGGTGGTTGCGTGGACTGCGAGGAACAAG
AGGAGAAGGTGGTGGCCGGGAGCCAGCGCAGGGTGAAGCGCTACCGCTTGATCACTGAGATCTATGCCGCGACGGAGGAA
ATTGGGGGTCGCAGTGGCAGCAGCGCGAAGAACAAGAAGAAGGAATAGACAAGGAGAGATGAGAGGGAAGAGGG----AC
CT----TCTTGTAATTCTCGTGGTTGCTAGGGGGTAGCTCGTTGTTCGAGCCGGCAGTCCTCTCCTTCCTCTCGCCGGAA
GGAGGAGTCGCTATCGCTATCGATCTCGCTGTAAAAGTAAAAGCTTCATCTTTGCAATAAGACTTACTTTTTGGCAGGAG
CTGAATACATCCATGGCGGCTTCTGAATTCTGAACTGAAATGGTTAATTTGGTTCGTCTCGCACTGTGGTGCTAGCTGGC
TAGGCTGGATCTCGGCCGAATCGGTC-------GCCTTTGCAGATCGATGGTGTCCATGGAGACAAGGATGATAGCTCCG
GCCATGGATCCGGCTTGGTAGC------------------GCCGCC------GATCGATGCCTGCGTCCAAGCAATTTTC
GCAATTTAGTATATGCGAGTGCGGG------TGCGATTCGCTGAAAGATCGATTT----ATTCGTGAAATTTGGTGTTGT
GTTTGTTTGATTCGGGCAACGACGAGATGCAG-------TGCACTGATCTGCGAGTCCAATTTCCAGCGGAAATGCTGGT
TCTGTGTGTGGCTGTGGTAGAACTTTGGTCCTGTAGAT----AGATATTGTGC---TGGAGGCCGGAGCCGCTGGCCACT
GATCGCAGTCTCTTGCTCC-----GGCGGCGCGTGC---------------GTTCGATACAACTCCTGCC-----TCTTC
ATACTGGTTTGGTTGATTTAGACGAGTCCAATCTGTTGCACTTCACAGGACGGA-----TGAGGATTGAGCTGCTGGGAT
CAGAAACAATGGCGGGAGGCGAATGGAATGTTCTAGAAGCGCCTCCATGCAGGGCGGTCGTGCGAGAGTTCCATTTCTTG
CACCCGCATGTACGTGGTTTCCTTTCCGATTAAACCACGATGG------AGCTTATCATCTGAGATGACTGATCAGGCTG
C---------------------TGCAGGTTGTTGCACCGATCAGATGTATGGAAATGTGATCCTCCAAATAGAACAGTTC
GATTTCAGAATGTGTTCGCCGGAGTTGGTACAAGCGGCCCGCAACTTTTCCTTGTAGAACCCGA-TCTAGCTTGGTCAAT
TTTCCTCTGATGCTGCTGCGAGACATCAGATATGC---------------------------------------------
-----------------------------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
-------------------------------------------------S------------S-----------------
---------S------------S-----------------S---S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
----------------S-S----S----S-S------------------------------------S------------
-------S----------------------------------S-S--------------------S--------------
-------------------------------------------S-------------S----------------------
------------S-S-------------------S----SS-------S-------------------------------
---S------------------------------------------------S----------SS---------------
-S-----------------S------S--------------S--------------------------------------
----------------------------------SSS---SSSS------------------------------------
--S-S-----S---------S-SSS----------S--S---------------S---------------S---S-----
--------------S----------------------------------------------------S------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S--------S----------S--------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S---------S------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------S-----------------S------------S----------------
--------------------------------------------------------------------------------
----------------S---S--------------------------------------S--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--SS-----------------------------------------------------------------S----------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------S-----------------------------------------
-------------------------------------------------S------------------------------
---------------------------------------------S---S------SSS--SS-----------------
---------------------------------------------------------------------------SS---
---------S-------------------------S-----------------------------------
>forward_907
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ACGAGCGTGAAACTAGACCG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_2937
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ACTCCACCGTCTAGCTTGGT----
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
