>input_sequence_67883
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--ATGAGCGGCGGCGGCATGGACTCGTCGTCGTCGTCGTCCTCGGGCACGGGGGGCTCCGGCGC---------GGCGCCG
TTCGTGGCCAAGACGTACGGGATGGTGGACGACCGGGCGACCGACGCCGTCGTCGCGTGGGGGCCCG-CCGGCAACAGCT
TCGTGGTCGCCGACCCCTTCGCCTTCTCGCGCGCGCTGCTGCCGGCGCACTTCAAGCACGCAAACTTCTCCAGCTTCGTG
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTGGACCCGGACCGGTGGGAG--------TTCGCGCACGCCTCCTTCCTC
CGCGGCCAGACCCACCTCCTCCCCCGCATCGTCCGGCGCCAGAGCAGCAAGC------GCGG---------CAAG-----
-------GATA---GCAGGGAGGAGGAGGAGGAGGAGAGCAGCAGCG------CGGC---GCTGGCGATG------GAGG
TGGTGCGGCTGAGGAAGGAGCAGAGGGCCACGGAGGAGCGCGTGGCGGAAATGTGGCGCCGGGTGCAGGAGACGGAGCGC
CGGCCCAAGCAGATGCTCGCCTTCCTCCTCAAGGTGGTCGGCGACCCGGACGTGCTGCGCCGCCTCGCGGGCGGCCCAGG
CTCGGGGGGCGG------CCCGGACGAGGGCGCGGAGGAGGTCAAGAGGCCGCGGCTGCTGCTCGACGGGGAC-------
-----------------------GGCGCGGGGGTGGAC------GGGGGGCTACTGT------ACCACCACAGCGGCAAC
CTGATGAACCTGGGGGAGGCCCTGGTGCCGGAGGAGCCGAGCGTGGACATGTACTACGCCGGAGGCGACGGGTTCGGCGG
CGTGCAGGCGGACGGCGGG------------CCTCCGTACGCT---TTCCACATGGACACCGGCTACTGA----------
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>chr4B_1_TraesCS4B01G385800
TAGATGTGGACGGCGAGTTTGGATGAGGACGGCCCCGCCGCACGGTCGGCTTAAAAAAAGACGAGCGTCGTCGCTGAAGC
GTGGGCCCGTCGTCATAAATTAAGCTGACTGCGTGGGCAGCGGGTAGTTGGACGGCTGCCATGTGAGGACGCGGTGGATA
GCGAGAAGGCGTGCGAAGCGTCCGTTCGGCGTCCGCGCTGCAGATGCGTCGGCGTGGACGCGACGCGGACGTGATTTGGG
TTTGGGTCGGCGCGTTGGGCCGCCACTTTTGTCCGCGCTAACCCAAACGGACGCAGCCGGACGAAATGGGTCGGCCCTTT
GGAGTTGCTCTTAAAACATAGGACATCATCGCCGTTTCATCCTCATCTGAGGAGGAAGACTCCATGAAATTGATGTAGAA
GTACTTGTTGTCAGAATACCCCGTGTTTGCTTCGAAGTATCAAAGTAAATTAAAAAAATGGCAAGATTATGACATTTGGA
CACACATTTCTGGGGTGTGGTGTCCGCCGTGGACAACCGCTGCAGGGACAGAGGGCACCTGGGGCGACGGACGGATGAGC
GAGGGGAGGGGACTCGCCTCCGGACATACGCGACGCTGCATAGGATGATAAAAATGGTCCCAATCTTTTTCTTGTTCATA
ACCCATCATCCATCAACCTTTGTATATTGTCACCCGGGCCTAGTGGCTAGCCCAGTTTGTTTCCTCAGGAGCGCAGCTGA
CCACAGAAATGCAAAGCGCGGATACTTCGCTTCAACTTGGCCGCTTTTGTC-GACTCAGCGGCTACAAAATCTCGCCGCC
CACGAGCGGCC-GCCGCGTGCGCCACCACGCGTCGCTCCACCTGTCCTCCTCTCCCCCGTCGACATCCGGCCTACATAGA
GAG---------CAC------CTCCGGTTGACACATCTCCACATCTCCCAGTCGCAGTCC--------------------
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----------------------------------------------------------------------------ATCC
ACTCCCCGTCCGTTCCCCACCCAGCAGCAAGCAAAGCACCTTCCCTTTCTCT---------TCTCTCCTCACCGTCGCGA
CGATGAGCGGCGGCGGCATGGACTCGTCGTCGTCGTCGTCCTCGGGCACGGGGGGCTCCGGCGC---------GGCGCCG
TTCGTGGCCAAGACGTACGGGATGGTGGACGACCGGGCGACCGACGCCGTCGTCGCGTGGGGGCCCG-CCGGCAACAGCT
TCGTGGTCGCCGACCCCTTCGCCTTCTCGCGCGCGCTGCTGCCGGCGCACTTCAAGCACGCAAACTTCTCCAGCTTCGTG
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTGGACCCGGACCGGTGGGAG--------TTCGCGCACGCCTCCTTCCTC
CGCGGCCAGACCCACCTCCTCCCCCGCATCGTCCGGCGCCAGAGCAGCAAGC------GCGG---------CAAG-----
-------GATA---GCAGGGAGGAGGAGGAGGAGGAGAGCAGCAGCG------CGGC---GCTGGCGATG------GAGG
TGGTGCGGCTGAGGAAGGAGCAGAGGGCCACGGAGGAGCGCGTGGCGGAAATGTGGCGCCGGGTGCAGGAGACGGAGCGC
CGGCCCAAGCAGATGCTCGCCTTCCTCCTCAAGGTGGTCGGCGACCCGGACGTGCTGCGCCGCCTCGCGGGCGGCCCAGG
CTCGGGGGGCGG------CCCGGACGAGGGCGCGGAGGAGGTCAAGAGGCCGCGGCTGCTGCTCGACGGGGAC-------
-----------------------GGCGCGGGGGTGGAC------GGGGGGCTACTGT------ACCACCACAGCGGCAAC
CTGATGAACCTGGGGGAGGCCCTGGTGCCGGAGGAGCCGAGCGTGGACATGTACTACGCCGGAGGCGACGGGTTCGGCGG
CGTGCAGGCGGACGGCGGG------------CCTCCGTACGCT---TTCCACATGGACACCGGCTACTGATGGCCGTCGG
CTCGGGCTTGGGCGGCTGGTGCGCGTGCTTCCGCCGGCGAACGAACTTCCACCGGAATTGCTCTGCTCTGTCTGTCTGTA
TGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAGAGGAAAGGAGGCTAGTAGGTAGAGGGG
TAGGCTCTGACTTGTGGCTGTACTGTACAGGAGATGGAATCTCAAGCTGTGAGACCTATACATGTTTGAGAGGCCAGGAA
ATGCACACTGCTGGAGGCATATATATGCAGCATCACATGTCATGGATCTGCTCAGCTCAGGTCTCCTCCCCATTGCTGCT
GAATACTTTAATTTTTTGCTTGATGAAGATGCGGTCCACATGATCCGGAGGGAGCTGATGCAGTGCTGCCTGGAAGATCA
ACTTTTCCCCACTCTGTTTTTCGAGCTGTAATAGTATCTTAACCACACAATTCCCCATGTTTTTACTTCTTCTGAATATT
TGTAGTGGCTGAACGATCCATATGAGACATGCTTTCTTTACATATACTACCCCTCTCTGTTTAGATCTTATATTTCTTTA
CAGAGGAAATACATGAAATGGGACCGGGGATGTTTGATCCCTCATCATCTAAGAAAATTTAATTTTGGTTGATCGCAAGA
AAACCAGTAAGATCGTCAGAAAGGAAAAAACTGAAAATTATTCACGTCATGCTCCGACGCGATAACGTCACGAATGCACA
CCAACACAGTACACATCGAAGAAACGTTCAGCCAAGAATGCAAATCATTTACACATAGCAAGAATGTATGAGGAGCTTAA
TTCGTTGCTCGTCTGAACCAAACCACCTTGCGCTCATCCACCCCATCAATCAAGTCTTTTGTAAAGAAACATAAGAACGA
CCCCGCAAAAAAAAACATAAAAACGTTTAGATCACTACTCCCTCAGTAAGCTAATATAAAAGCGTTCAGAACACTAAAAG
TAGTGATCTAAACGCTCTTATATTTGTTTA
>chrUn_699
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----------------------------------------------------------GTTTCCTCGGGAGCCCAGCTGA
CCACAGAAATAGAAA--GCGGATACTTTGCTTCAACTTGGCCGCTTTTGTCAGACTCAGCGGCCACAAAATCCCGCCGCC
CGGCGAGCGCCTGCCGCGTGCGCCACCACGCGTCACTCCACCTGTCC-CCGCTCCCCCGTCGACATCCGGCCTACATAGA
CACGGAGCAACACAC------CTCGGCTCGACACATCTCC----CTCCCAGTCGCAGTCC--------------------
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----------------------------------------------------------------------------ATCC
ACTCCCCGTCCGTTCCCCAACCAGCAACAAGCAA--------GCA----TCT---------TCTCTCCTT-CCGTCGCGA
CGATGAGCGGCGGCGGCATCGAATCGTC---------CTTCTCGGGGAGCTATGGCGTGGGCGCGGCGGGGGTGGCGCCG
TTCGTGGCCAAGACGTACGGGATGGTGGACGACCGGGCCACCGACGCCGTCGTCGCCTGGGGGCCCG-CCGGCAACAGCT
TCGTCGTGGCCGACCCCTTCGCCTTCTCGCAGGCGCTCCTCCCGGCGCACTTCAAGCACGCCAACTTCTCCAGCTTCGTC
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTGGACCCGGACCGCTGGGAG--------TTCGCGCACGCCTCCTTCCTC
CGCGGCCAGACGCACCTCCTGCGCCACATCGTCCGGCGCCAGAGCGGCGGCAAGCGCGGCGG---------CAAGGACGG
CAAGGAGGTCG---GCGACGAGGAGGAGGATGAGGAGAGCAGCAGCG------CGGT---GTTGGCGATG------GAGG
TGGTCCGGCTGAGGGAGGAGCAGAGGGCCACCGAGCAGCGCGTGGCGGAGATGTGGCGCCGGGTGCAGGACGCCGAGCGC
CGGCCCAAGCTGATGCTCGCCTTCCTCCTCAAGGTCGTCGGCGACCCCGACGTGCTGCGCCGCCTCGCCGGCAGCTCAGC
CTCAGTTAGCGG------CCTGGATGAGGGCGCGGAGGAGGTCAAGAGGCCGCGGCTGCTCCTCGACGGGGAC-------
-----------------------GGCGTGGGGGTGGAC------GGGCTGT---TGT------ACCACCACGGCGGCAAC
CTGA---ACATGGAGGAGGCCCTGGTGCC---GGAGCCGAGCGTGGACATGTACTACGCCGGAGGCGACGGGTTCGGCGG
CGTGCAGGCGGACGGCGGG------------CCGCCGTACGCT---TTCCACATGGACAGCGGCTACTGAGGGCCGTGGG
TTCGGCCTTGGGCGGCTGGTGTGCGTGCTTCCGCCGT----CGAACACCCGCCCGAATTGCTCTGCTCTGTGTGTATGTA
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>chrUn_768
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-----------------------------------------------TGTC-GACTCAGCGGCCGGGAAATCCCGCCGCC
TGCGAGGAGCC-GCCGCGTGCGCAGCCACGCGTCCCTCCACCTGTTG-CCCCTCACCTGTCGGCATCCCCTGCGCTGCGT
ATATACACCTCGGCAGCTGGGCTCGACACGACACAGCTCC-----TCCCAGTCCGTCC----------------------
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--------------------------------------------------------------------------CAATCC
ACTCCCCGCTCGTTCCCCAACAAGCAGCAAGCAGCAAGCAACGCA----TCT---------TCTTGCCGT-C--TCGTGA
TGATGAGCGGCGGCGTCAGCGGCGTGGAGTCGTCCTCCTCCTCGGGGAGTTGTGGT------GCGGCGGGGGTGGCGCCG
TTCGTGGCCAAGACTTACGGGATGATGGACGACCGGGCCACCGACGGCGTCGTCGCGTGGGGGCCCG-CCGGCAACAGCT
TCGTCGTCGCCGACCCCTTCGCCTTCTCGGAGATGCTGCTGCCCGCGCACTTCAAGCACGCCAACTTCTCCAGCTTCGTC
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTGGACCCGGACCGGTGGGAG--------TTCGCGCACGCCTCCTTCCTC
CGCGGCCAGACCCACCTCCTGCGCCGCATCGTCCGGCGCCAGAGCAGCAAGC------GCGG---------CAAG-----
-------GATA---GCAAGGAGGAGGAGGACGACGACGGCAGCAGCAGCGCGACGGC---GCTGGCCATG------GAGG
TGGTGCGGCTGAGGAATGAGCAGAGGGCCGCGGAGGAGCGCGTGGCGGCCATGTGGCGCCGGGTGCAGGAGACGGAGCGC
CGGCCCAAGCAGATGCTCGCCTTCCTGCTCAAGGTCGTCGGCGACCCCGACGTGCTGCGCCGCCTTGCGGGCGA------
---------------------GGGTGCGGGCGC---GGGGGACAAGAGGCCGCGGCTGCTTCTGGACGGCAGACAAGAGC
AGAGGATGTCCGTCGACGGCGCGGGGGTGGGGGTGGTC------GGGCTGT---CGT------ACCACAATCACAGCAAC
CTGA---ACCTGGAGGAGGCCTATGTGCT---GGAGCCCGGCGTGGACTTGTACTGCGCCGGAGGCGACGC---------
---GCAGGCGGACGGCGGCGGCGGCGGACACCCGCCGTACGCG---TTCCACGTCGACAGCGGTTACTGA----------
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>chr5A_914
GGCGCCGTTCGTGGCCAAGACTTACGGGATGGTGGACGACCGGCCCACCGACGCCGTCGTCGCGTGGGGGCCCGCCGGCA
ACAGCTTCGTCGTCGCCGACCCCTTCGCCTTCTCGGAGATGCTGCTGCCCGCGCACTTCAAGCATTCCAACTTCTCCAGC
TTCGTCCGGCAGCTCAACACCTACGGCTTCCGCAAGGTGGACCCGGACCGGTGGGAGTTCGCGCATGCCTCCTTCCTCCG
CGGCCAGACGCACCTCCTGCGCCACATCGTCCGGCGCCAGAGCAGCGGTACCGGAGGCAGGCGCGGCAAGGACGACCGCG
AAGATGAAGACGGCAGCAGCGCGATGTTAGCCATGGAGGTGGTCCAGCTGAGGCGGGAGCAGAGGGCCACCGAGGAGCGC
GTGGCGGCGATGTGGCGCCGGGTGCAGGAGACGGAGCGCCGGCCCAAGCAGATGCTCGCCTTCCTGCTCAAGGTGGTCGG
CGACCCCGACATGGTGCGCCGCCTCGCAGGCAGCGGCCAGGACGAGGACGCGCGGGTCAACAGGCCGCGGCTGCTTCTCG
ACAGCAGGGAAGAACAGAGGATGCCCGTCGACGGGCAGTCGTACCACAATCACAGCAACCTGAACATGGAGGAGGCCTAT
GTGCTGGAGCCCAGCGTGGAATTGTACTACGCCGGAGGCGACGTGCAGGCGGACGGCGGCGGACACCCGCCGTACGCGTT
CCACGTCAACAGCGGCTACTGACTGCGTGCGTGAACGCTGTCCGGCATCTGTATTTTGTGGCTTTGTCGAGAGAGAAATA
GGCACGTGCAGGAAGCTAGCCAGATACTAAATACTCCGGCATAGCTCAGGAACAGAAACGCCGCACTTGTATAAGAGACG
CTTAGATCACAATGTCTCTGGAATTTAGTCAGTGTAAGTTTATATTTCTTTGTACTCTCTTCGTTCTTAAGTATATCTCA
TTTTAAAGATTTTAGTATAGACTATATATGAATGTATATAGACATATTTTAAAGTATAAATTCGCTTATTTTAATTCGTA
TGTAGTTTATATTGAAATCTCTATATATCTAAGAACAAAAAAGTCTATATCCAAGAACAAAGAAAGTAGTTTATATTTAT
TTACGGAGGAAGTGTTGACGTATAATGTGCTGCCTAGTCTCTTTCATCAGATCGGTCTTTTAGTTGTATTGGTTAGAGTG
TGCATTTCTACATGGTATCGAAGCCAAAAGGTCTTGAGTTTAATACCTGGCTGGCGCAATTAAATTGTAGCCCAATTTCG
ATCCACGTTTAGGCCTGAGAAAGCCACACATGAGGAAAAGTGTTGACGTATAATGTGTTGCCTAGTCTTTTTCATTAGAT
CGGTCGGTCTTTTGGTTGCATATAGTTTATTTCTGCGTGTTGGCTATTTCTATTAAAACATGATTCTGGCTTGTCTTTTC
TCTTTGCCGGAAATGAATCTGCCTGTCACCGCGACGTGTTGGCTACCTCGACCACCGCTCCTGCGCCCTCGATTACTTTG
ATATATGGAGCAAGGCTATCACCTTATGATTAATATTTTTCCAAAACATATGTGAGGGTACGGCGACTATGGGGAGCCGT
TATTGGGCCAGCCAAGTAACCACACGGGCGTGTCAGACTGACATCACCCATACTTTTTTACATTTTTACTATTGTTTATA
TTTTGAAATATTGTAAATATATATAATGCAAAAAAACACGTTCACATATGTTTTGGAAAAATATTAATCATGTATTAGAA
AATGTTAAACAAGTATAGCAAAACATTAATCGTGTGTACGGATAAATGTTGGTGACATTAAAAAATGGACGTGATATTTA
AAAGATGTTTTTACAATACAAATAAATATTTAAAGAATTAAATAATTGTTTTTAGAAATGTACATTACATTTTTTAAAAT
ATTCAAGAGTTTCAAAAACGTGTTTGTGGAATTTTCAGAAAAAAGTATACAATGTTAAAAAAATGTTTCGTGATGTAATA
AAAAAATTGTGCTATTAAAAAAATGCACATGAAATTTTAAGTAAAAAATCAATCGATTCAAAACAAATGTTCATGAAATT
TTTCAGTGTTGACTATAAAATGTAAAAAGATGTTCCTGTCATTAAAATAATGCTTATTCACATTATAAAAAAGTATGTGA
TATTTTATAAAAATTGTTCAAGTGTGTCTAAAAAAGGCCGTGCAAATTTTAAAAATGTTCATACAATGTAAAACATGTTC
ATGTAGTTTAACAAATGTTTATTGCCATTAAGAAAATATGCAGCATGTATTTGGAAAATATTACTGTCTATTCAGAAAAA
GTGTTCAAAACATGTATTTTTTAAAATGAAAATCATGTGTTTGAAAAAATTTCGAAGTGTGTCAAAAAATAGGGTTATAA
TGATACCCAACCACAACCCTCTGTCTTCCTTTAATTATATCTCACCTCATCTAAAATTTCTAGTTGGCATGAACAATACT
TACAAGTCATCTTTTGGCCGGTTCATGAATCATTGGGCCTTATATATTTCGTAAGCATTTAACTCCAAAACAACTATAGA
CAAATCATATGAACTACTTTGTGCATCTGATGGAAAAAAATGATAAACGCCATGATAACGTTGGTGGATTATTATAATCA
TATAAGTTTAGAACATACTTTACCATTGGCGGTATTACCTCGTAATATTTCTAAATAATCAAATGCAAGATGCAGAGCTC
AAGCTCAAATGCATAGCAGTTCACAATCTTTTTTTTTAAGTTCCTTCTAGCTCCTTCATCTTCATCCTCTACAATCATGT
TTGCATTATCATCCGAGCTGTCATCATCTCCCACAAGGTCTCTGGATCTCCAGGTCCTCGAAAAATCGCAAAACGGGCTT
GGAGCACTCCAGATGCCCTCTTCACATCCTTGCTAGCTCCTTCTTATATTTGGGCAAACTGAGCTCTTTTCTGACCAACT
GGCTCAAAGATGGTCTCGACGAAGGTCACCAATGGAGGATGGATACCATTAACTAGATAGTAGCCCATGATGTAGTCATG
ACCATTGATGGTATAGTTGACACGGAGGAGTTTGTCCTTTAGTCAACCTACCAAACAAAGAAGACTGCTGCAACACGTTG
ATGTCATTGTGAGACCTAGGCATGCCAAATAAAGCGTGTCAAATTCATAGGTCTTATGATGCAACAGCTTCAAGAATGAT
TGTGGGCTTCTTAACATGTCCCTAATTTTTGCCCTTGGAGAGCACATGGGCAGTTTTTCTGTCTCCATTGCATGCAGTCG
AGGGATCCAAGCATACCTAGCCACCCTCTTACTTCTGAGAGTGACATTAGCCTTTCGGTGTCTACGTCAGTTGGTCCTCT
TAAGTACTACAGTCCAAACACCTTGACCACCCTTTTAGCAAACCTCACCATGGCAACTCTACATGTGCTTACAAACATTC
AGAGGTACTTGTCCCATGAATCTGTGTTGGTTCCATGGGCGAGTATCCTCAATGCAGCGTGCACTTCTGCTAATCAGGGT
ATCCATTTTTTTTCCAATGGCGTCATTTTTCAAGATGAAGTAGTCATCATAAGCTCGGACACCATTGTTGAGGCGACGAA
AACATCTCTGCGCATCCGAAAGCGCCGGTGAAAATTGTTCGTGAATAGGGCATCTAGGGCAAAGTAAAACTTTCATCATC
GTCAAATGCCCTCGTGTCCTCTTCCGATTCAACACTCGATGTTTCTTGATTGATCCCTTAAAATTCAAGACATGATCCTC
CGCATGATCTGCTTCTACTAGGACCTCCTGCATCATCGTTGTTTCATCCACATCTGATGAGGACGACTCCATGAAGTTGA
TGTAGAAGTACATGTCGTCAGAATCCATCGTGTTTGCCTCGAAGTATCAAAGTACATAGAAAATGTCAACGCTATGACAT
TTGGACAAACACTTTGTGGGTGTGGTGTCCGCCGTGGATGGCAACTGCAGGGGTAGACGGTACCAGGGCAGCGGATGGGC
AAGGGGAGCGGGCGATGGTGTAGTCAAAGCGCGCCTGGTTTCTGGTTGCAACGGCGAAGATCTGGGCGGGTTGATACAGC
GGCCGCGGCAGCCTATCCAGGAGCGGATACAAAAAGCTTTGGGAGCGAAGTGAGAAAGATACACATGCTTTAGGCGTAGT
TGCGGGTGTGTCGAGGGTGTCGAAGGCCTAATGGCGAAGGACCGGACTCCCGCGAGCCTCCCCAACTTTACATTCAATTG
CTTAAATTCTCATCTGCAAATATACATGGCACTGGCGAACCAACCTGTGGTTGGATGGTTAGAGGGACAATTGTATCCCC
GGCCCACCAAGATTCAAGTCCTGGTGCTCACATTATTCGTGGATTTATTTCAGTATTTTCAGTGATGCGCTTTCGGCGGG
AGGGGACGTTTTCATCGACGACGAGGCGTCTACGGTAACTTTGTAAATTTCAAGATGTCATGTCGTCGCAGTCGCAGTCC
GCTCCCCCTTCATTCCCCGACCAGCAACAAGCAA--------GCGAGCATCGTCTCTTCTCTCTCTCCCT-CCGTCGCCA
CGATGAGCGGCGGCATGGAC------------TCGTCGTCCTCGGGCTCCGGGAGCTCTGGTGGTGCGGGGGTGGCGCCG
TTCGTGGCCAAGACGTACGGGATGGTGGACGACCGGGCCACCGACGCCGTGGTCGCGTGGGGGCCCG-CCGGCAACAGCT
TCGTCGTCGCCGACCCCTTCGCCTTCTCGCAGGCGCTCCTCCCGGCGCACTTCAAGCACGCCAACTTCTCCAGCTTCGTC
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTGGACCCGGACCGGTGGGAG--------TTCGCGCACGCCTCCTTCCTC
CGCGGCCAGACGCACCTCCTCCCCCGCATCGTCCGCCGCCAGAGCAGCGCCAAGCGCGGCGG---------CAAG-----
-------GAGG---GCGGCGAGGAGGAGGATGAGGAGAGCAGCAGCA------CGGT---GTTGGCCATG------GAGG
TGGTCCGGCTGAGGCAGGAGCAGAGGGCCACGGAGGAGCGCGTGGCGGAGATGTGGCGCCGGGTGCAGGAGACGGAGCGC
CGGCCCAAGCAGATGCTCGCCTTCCTCCTCAAGGTGGTGGGCGACCCCGACGTGCTGCGCCGCCTCGCGGGCAGCTCGGG
------GGGCGG------CCAGGACGAGGGCGCGGAGGAGGTCAAGAGGCCGCGGCTGCTGCTCGACGCGGAC-------
-----------------------GGCGCGGGGGTCGACGCAGGGGGGCTGT---TGTACCACCACCACCACAGCGGCAAC
CTGA---ACCTGGAGGAGGCCCTGGTGCC---GGAGCCCAGCGTGGACATGTACTACGCCGGAGGGGACGG---------
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>chrUn_1060
C-------------------------------------------------------------------------------
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-----------------------------------------------------------------------GTGGCGCCG
TTCATGGCCAAGACGTACGGGATGGTGGACGACCCGGCGACGGACGGCGCCGTTGCGTGGGGGGAGCACCGACAACAGCT
TCGTCGTCGCCGACGTCCCCGCCTTGTCGCGCGCGCTCCTCCCCGCGCGCTTCGGCCACGCCAAGTTCGCCAGCTTCGTC
CGCCAGCTCAACGCCTACGGCTTCCGCAAGGTCCACCCGGACCGGTGGGAG--------TTCGCCCACGCCTCCTTTACT
T-------------CCTCCTGCGCCACGTCGTCCGCCGCCGGAGCCACAAGCT------------------CAAG-----
-------GACG---ACGGCGAAGAGGACGACGGAGGCAGAGGCACGA------CGACACTGCTGGTCATGGATCCAGAGG
TTGTCTGGCTGAAGCAGGAGTAGAGGGCCACGGAGGAGCGCCTGGCGGCCATGCGGCGCCGGGTGCAGGAGACCGAGCGC
CGGCCCAGGCTGATGCTCGCCTTCCTCCTCAAGGTCGCCGGAGATCCCGACGCGCTGCGCCGCCTCGTAGGCGACTTCCA
C------GGCGG------CCCGCAAGATGGCGC---GGGGGCCAAGTGGCCGCGGCTGCTTCTCGACG------------
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>chr4B_1063
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-------------------------------------------------------------------------GGCGCCG
TTCGTGGCCAAGACTTACGGGATGGTGGACGACCGGGCGACCGACGGCGTCGTCGCGTGGGGGCCCG-CCGGCAACAGCT
TCGTCGTGGCCGACCCCTTCGCCTTCTCGCAGGCGCTGCTGCCGGCCCACTTCAAGCACGCCAACTTCTCCAT-TTCGTC
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTGCACCCGGACCGCTGGGAGTTCGGCAGTTCGCGCACGCCTGCTTCCTC
CGCGGCCAGACGCACCTCCTCCCCCGCATCGTCCGGCGCCACAGCGGCGGC---------GGCAGCAGGCGCGCC-----
-------AAGG---AGGACGGCGACGAGGATGAAGGCATCAGCAGTA------CGGC---GCTGGCCATG------GAGG
TGGTCCGGCTGAGGAATGAGCAGAGGGCCACGGAGGAGCGCGTGGCGGCGATGTGGCGCCGGGTGCAGGAGACGGAGCGC
CGGCCCAAGCAGATGCTCGCCTTCCTCCTCAAGGTCGTCGGAGACCCCGACGTGCTGCGCCGCCTCGCCGGCAGC-----
----------GG------CCAGGACCAGGGCGC---GCGGGTCAACAGGCCGCGGCTGCTTCTCGACGGCAGGGAAGAAC
AGAGGATGCCCGTCGA---------------------C------GGGCTGT---CGT------ACCACAATCACAGCAAT
CTGA---ACATGGAGGAGGCCTTTGTGCT---GGAGCCGAGCGTGGACTTGTACTACGCCGGAGGCGACGG---------
---GCAGGCGGACGGCGGCGGCGGCGGACATCCGCCGTACGCGGAGTTCCACGTCGACAGCGGCTACTGA----------
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>chr4B_1063
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-------------------------------------------------------------------------GGCGCCG
TTCGTGGCCAAGACGTACGCGATGGTGGACGACCCGGCGACCGACGCCGTGGTCGCGTGGGGGCCGG-CCAGCAACAGCT
TTGTCGTCGCCGACCCCTTCGCCTTCTCGCGCGCGCTGCTCCCGGCCCACTTCAAGCACGCCAACTTCTCCAGCTTCGTC
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTCGACCCGGACCGGTGGGAG--------TTCGCGCACGCCTGCTTCCTC
CGCGGCCAGACGCACCTCCTGCCCCGCATCGTCCGGCGCCGCACCGGCGGC---------GGCAGGCGCGCCAAG-----
-------GACAGCCACGACGAGGAGGAGGATGAAGACATCAGCAGCA------AGAT---GTTGGCCATG------GAGG
TGGCCCGCCTGAAGGAGGAGCAGAGGGCCACCAAGGACCGCCTGGCGGCGATGTGGCGCCGGGTGCAGGACGCCGAGCGC
CGGCCCAAGCTCATGCTCGCCTTCCTCCTCAAGGTCGTCGGAGACCCCGACGTGCTGCGCCGCCTCGTAGGCAACTCGGG
TGGCGGCGGCGGATTGTTCCCCGGCGAGGGCGC---GGAGGCCAAGAGGCCGCGGCTGCTTCTCGATGGGGA--------
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>chr4B_1063
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-------------------------------------------------------------------------GGCGCCG
TTCGTGGCCAAGACGTACGCGATGGTGGAGGACCCGGCGACCGACGCCGTGGTCGCCTGGGGGCCGG-CCAGCAACAGCT
TCCTCGTCGCCGACCCCTTCGCCTTCTCGGAGATGCTGCTGCCCGCGCACTTCAAGCACTCCAACTTCTCCAGCTTCGTC
AGCCAGCTCAACACCTACGGCTTCCGCAAGGTCGACCCCGACCGCTGGGAG--------TTCGCGCACGCCTCCTTCCTC
CGCGGCCAGACGCACCTCCTGCGCCGCATCGTCCGGCGCCAGAACGGCGGCAAGCGCGGCGGCAAGGACGGCAGG-----
-------AACG---GCAAGGAGGAGGACGATGAGGAGAGCAGCAGCA------CGAT---GCTAGCGATG------GAGG
TGGTCCGGCTGAGGAACGAGCAGAGGGCCACCGAGGAGCGCGTGGCGGAGATGTGGCGCCGGGTGCAGGACGCCGAGCGC
CGGCCCAAGCAGATGCTGGCCTTCCTCCTCAAGGTCGTCGGAGACCCCGACGTGCTGCACCGCCTCG-------------
--------------------------------------------------------------------------------
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------------------------------
>chr4B_1063
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------GGCGCCG
TTCGTGGGCAAGACGTACATGATGGTGGACGAGCCGGAGACCGACGCCTTGGTGGCGTGGGGGCCGG-CCAGCAACAGCT
TCGTCGTCGCCGACCCCTTCGCCTTCTCAGAGATGCTGCTCCCGGCCCACTTCAAGCACTCCAACTTCTCCAGCTTCGTC
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTCGACCCGGACCGGTGGGAG--------TTTGCCCACGCCTCCTTCCTC
CGCGGCCAGACACACCTCTTGCCCCGCATCGTCCGGCGCCGGAGCACTACCCGTCCTT------------CCAAG-----
-------GACG---ACAACGAGGGGGAGGATGAGGACACCAGCAGCA------CCAT---GCTAGCCATG------GAGG
TGGTCCGGCTGAAGCAGGAGCAGAGAGCCACCGAGGACCGCTTGGCGACGATGTGGCGCCGGGTGCAGGACGCCGAGCGC
CAGCCCAAGCTGATGCTCGCCTTCCTCGTCAAGGTCGTCCGAGACCCAGACGTGCTGCGCCACCTCG-------------
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------------------------------
>chr5A_1063
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-------------------------------------------------------------------------GGCGCCG
TTCGTGGCCAAAACGTACGCGATGGTGGACGACCCGGCGACCGACGCCGTGGTCGCGTGGGGGCCGG-CCAGCAACAGCT
TCGTCGTCGCCGACCCCTTCTCCTTCTCGCGCGCGCTGCTCCCGGCCCACTTCAAGCACTCCAACTTCTCCAGCTTCGTC
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTCGACCCGGACCGGTGGGAG--------TTCGCGCACGCCTCCTTCCTC
CGCGGCCAGACGCACCTCCTGACCCGCATCGTCCGGCGCCGCAGCGGCGGCAAGCGTGG------------CAAG-----
-------GAAG---ACGCCGACGAGGAGGATGAAGACATCAGCAGCA------AGAT---GTTAGCCATG------GAGG
TGGTCCGGCTGAAGGAGGAGCAGAGGGCCACCGAGGACCGCTTGGCGACGATGTGGCGCCGGGTGCAGGACGCCGAGCGC
CGGCCCAAGCTGATGCTCGCCTTCCTCCTCAAGGTCGTCGGCGACCCCGACGTGCTGCGCCGCCTCGTAGGCAACTCGGG
TGGCGGCTGCGGATTATTCCCCGGCGAGGGCGC---GGAGGCCAAGAGGCCGCGGCTGCTTCTCGACGGGGA--------
--------------------------------------------------------------------------------
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------------------------------
>chr4D_1063
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-------------------------------------------------------------------------GGCGCCG
TTCGTGGCCAAGACGTACGCGATGGTGGACGACCCGGCGACCGACGCCGTGGTCGCGTGGGGGCCGG-CCAGCAACAGCT
TCGTCGTCGCCGACCCCTTCGCCTTCTCGCGCGCGCTGCTCCCGGCCCACTTCAAGCACGCCAACTTCTCCAGCTTCGTC
CGGCAGCTCAACACCTACGGCTTCCGCAAGGTGGACCCGGACCGCTGGGAG--------TTCGCGCACGCCTGCTTCCTC
CGCGGCCAGACGCACCTCCTGCCCCGCATCGTCCGGCGCCGGAGCGGCGGCAAGCGTGG------------CAAG-----
-------GAAG---ACGCCGACGAGGAGGATGAAGACATCAGCAGCA------AGAT---GCTAGCCATG------GAGG
TGGTCCGGCTGAAGGAGGAGCAGAGGGCCACCGAGGACCGCTTGGCGGCGATGTGGCGTCGGGTGCAGGACGCCGAGCGC
CGGCCCAAGCTGATGCTCGCCTTCCTCCTCAAGGTCGTCGGAGACCCCGACGTGCTGCGCCGCCTCG-------------
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------------------------------
>chr3B_1063
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-------------------------------------------------------------------------GGCGCCG
TTCGTGGCAAAGACGTTCGCGATGGTGGACGACCCGGCCACCGACGCGGTTGTCAGGTGGGGGCCGG-CCAGCAATAGCT
TCGTCGTCGCCGACCCCTTCACCTTCTCGCACGCGCTGCTCCCGGCCCACTTCAAGCACGCCAACTTCTCCAGCTTCGTC
CGGCAGCTCAACACCTACGGCTTTCGCAAGGTTGACCCCGACCGCTGGGAG--------TTCGCGCACGCCTCCTTCCTC
CGGGGCCAGACGCACCTCCTGCCCCGCATCGTCCGGCGCCGGAGCGGCGGCAAGGGTGG------------CAAGGAA--
-------GACG---CCGACGGGGAGGAGGATGAAGACATCAGCAGCA------AGAT---GTTGGCCATG------GAGG
TGGTTCGCCTGAAGGAGGAGCAGAGGGCCACCGAGGACCGCTTGGCGTCGATGCGGCGCCGGGTGCAGGACGCCGAGCGT
CGGCCCAAGCTGATGCTCGCCTTCCTCCTCAAGGTCGTCGGAGACCCCGACGTGCTGCGCCGCCTCGTAGGCAACTCGAG
CTGCGGCGGCGGATTGTTCCCCGGCGAGGGCGC---GGAGGCCAAGAGGCCGCGGTTGCTTCTCGACGGGGA--------
--------------------------------------------------------------------------------
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------------------------------
>SNPs
SSSSSSSSSSSS-SSSSSSSSSSSSS---S--SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSS-SS-S-SSSSSSSS
SSS-SSS-------SSSS-SSSSSSS-S--S-SS--SS-SSSS-SS-SSS-SSSS--S-S-SSSSSSS-SSSSS-SS-SS
SSSSSSS---SSSSS--SSSSSSSSS-SS-SS-SSS-SS-SSSSS-SSSS-SS-SS-SSSSSS-SS-SSSSSSSSS-SS-
SSSSSSSSS--S-S-SSS--SS-SSS-SS-SSSSSSS-SS-S-SSSSSSSS--S--S-S-S--SSSSSS-SSS-S--SSS
SSSS-SSSSSSSSS-S--SS-SSSSSSSSSS-SSSSSSS-SS--SSSSSSS-SS-SSSS-SSSSS-SS-SS--S-SSSSS
--SSSS-SSS-SS-SSSS-SSSSSSSSSSSSSS--SSSSSSSSSSS-SSSS-SSSSSSSSSSSSSSS-SSSSSSSS-S-S
-SSS-SSSS-SS--SSSSSSSSSS---S-SSSS-SS--SSSS-SS----SSSS--SS-SSSS---SS---SS-SS-SSSS
SSS-SSS--SSSSS-SSSSSSS-S-SSS--SSSS--S-SSSSSSSSS-SSS-S-SSSS--SS-S-S-SSSSSS-SS-SSS
SSS-SSS-S--SSSSSSSSSSS-S--S-SSSS-SSS---SSS---SSSSSSSSS-SSS--------S-----S-------
----------SS---SS----------S--------------------------------------------S-------
-S----S---------------------------S------------S--S-----------------------------
S-S---------------------S-S-------------SSSS------------------------------------
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-------------------S--------------SSSS-SSSS-SSSSS--------------------SS---------
-------------------S-----------------------------S--------S---------------------
--------------------------------------------------------------------------------
----S--------------------------------------------------------S-----------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
-------------------------------------------------S------------------------------
-----------------------------------------------S---------------------------S----
---S----------------------------------------------------------------------------
-----------------------------------------------SS-SSSS--------------------------
----SSS------S---------------SSS------------------------------------------------
---------------------------------S-------------------------S----------S------S--
S----S---------------S--------------SSSSS-----SS--S--S-----------------S---S----
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_923
--------------------------------------------------------------------------------
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-----------------------CCGGTTGACACATCTCCACA-------------------------------------
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------------------------------
>reverse_6333
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------CTGAACCAAACCACCTTGCG------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
