>input_sequence_67861
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--------CCCCCGATCCAATCCACCCCCACCCTCACCTTGCCCAAGTCAAAGCAGATACAACCTTTCA-CTCCACCACC
ATGACGAAGCCATCGCCATCCCCA------CCGCCGGCGAAGGGCGCGGCGTCGCTGCGGGGCAGCCAGCTGAAGCAGCT
GCGCTCCCTCTTCGACCGCTTCGACATGGACGGCGACGGCAGCCTCACCCAGCTCGAGCTGGCGGCCCTGCTCCGCTCCC
TCGGCCTGCGCCCCACGGGCGACGAGTCCCGGGCCCTCCTCCTCGCCATCGACGCCGACGGCAGCGGCACCGTGGAGTTC
GACGAGCTGGCGCGCGCCATCGCGCCGGTCCTCACCGCCCACGCGCCGCGGCTCGTCGACCAGGCGCAGCTGCTCGAGGT
CTTCCGCGCCTTCGACCGCGACGGCAACGGCTACATCTCCGCCGCCGAGCTCGCGCGCTCCATGGCCAAGCTCGGCCAGC
CGCTCACGTTCGAGGAGCTGCGGACGATGATGCGGGACGCCGATGCGGATGGGGACGGCGTGATTAGCTTCGGGGAGTTC
GCCGCCGTCATGGCCAGGTCCGCGCTCGACTTCCTCGGCGTCCCCGCCGCC-------TGAGATGATGGCCCGCCGGGCT
CCGGCTGGCTCTGGGTCGGATCGACTGATTGATGTCCCGTCATGGTTCTCTGATTAATTAGGATCGGTGGTAGTATGTTT
CGTTCTTCTTCATGC----TAGAATTAGTGGTAGTAGGATGGTTCGAGGGCCGGATCGGATGAACTGTAACGAACTCGCA
CGGAATTGCAACGTTGACCT-GAAATGTGTATAAATTTTGGTAATTTGG-------------------------------
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-------------------------------------------
>chr1B_1_TraesCS1B01G446400
CGATCTATGATGGAGATGTGGTTCT-TCCATTCTGAAATTTTAGGTAGGCCTTCGTTGTCCGTCGCTTCAACCCTTACGA
CAGGTAGTGGCGACGTCATACAATAAATTAGTCCTCGGTGGTGCATTGCAGATAGTGATGGCGTTATTTTGTCGATGATT
AATTCATCCATCTCGATGTTTTTGTATGCGGTGGC-GTCTATGGTTCGCAGGCAAAGATTCTCAA---------------
------------------------------------TATCCTTTGCGGTCATCTTGGTCACTTTGGTGCATCCTCAGGTG
TCGAAGTGATGCGTCATGCGTGAGGGTTTTATTGGAAGCCAAGCTTTCCTGGTTGTGACGATTTCTTCTTTTCTTTAGGG
CGGTGGTCTTGCAAAACCTTGGTCATGATAACTTTCGGTCCGCGAGCAATGTTATGATGGCTTGAGCATTTGAGCGGCAC
GCCATCGGCTTATTC-----------GGACCCTGGCACAATTTCTTTTTACAGTTACTTATATTATGTTTCTACTACTTT
TTTTTGATAAAGATGTTTCTACTACTAGTTTGGTTAATAGACTCAAGTGTTTTTTGTTAAGAAAGAAAAGCTACAAACAC
CAAGTTCTTTTGTACTCCA-----TGTCTGATTTTGCATGCCACACAACCA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AGTAAAACCTCACGCCAGCAGCATTGAGCCACTGACCATCCC
CCTCTCTCAAGTAGGTTTGCAAGCTGGCCTAAAAATATTAATGAGAGGTTAATTATAGCTTGCAAGTTTT----------
-----------------------ACAGCCAACCTGAGGCAGCCACCAAGAAAGGGGAGGTAAAAACAAGAAGATACG-AC
AC--------TGAAGTTTTTGACGCGCACCCACCTCCTC--------------------------CTCCGCTCCTTCCGT
GCATGCACCCGCCGACCCGGTCACCACCAACGCCGACGCGTCTTCCTCCCTGCCTGCCGCCCGTCCGGCAATCTCTCCCC
CCTTCCCCTCCATAAATATATACCAAAGTCGTCTTCTCCACCCCGG----TCTCACCCCAAACCCATTCTCCATCCCCAC
CCCCACCTCCCCCGATCCAATCCACCCCCACCCTCACCTTGCCCAAGTCAAAGCAGATACAACCTTTCA-CTCCACCACC
ATGACGAAGCCATCGCCATCCCCA------CCGCCGGCGAAGGGCGCGGCGTCGCTGCGGGGCAGCCAGCTGAAGCAGCT
GCGCTCCCTCTTCGACCGCTTCGACATGGACGGCGACGGCAGCCTCACCCAGCTCGAGCTGGCGGCCCTGCTCCGCTCCC
TCGGCCTGCGCCCCACGGGCGACGAGTCCCGGGCCCTCCTCCTCGCCATCGACGCCGACGGCAGCGGCACCGTGGAGTTC
GACGAGCTGGCGCGCGCCATCGCGCCGGTCCTCACCGCCCACGCGCCGCGGCTCGTCGACCAGGCGCAGCTGCTCGAGGT
CTTCCGCGCCTTCGACCGCGACGGCAACGGCTACATCTCCGCCGCCGAGCTCGCGCGCTCCATGGCCAAGCTCGGCCAGC
CGCTCACGTTCGAGGAGCTGCGGACGATGATGCGGGACGCCGATGCGGATGGGGACGGCGTGATTAGCTTCGGGGAGTTC
GCCGCCGTCATGGCCAGGTCCGCGCTCGACTTCCTCGGCGTCCCCGCCGCC-------TGAGATGATGGCCCGCCGGGCT
CCGGCTGGCTCTGGGTCGGATCGACTGATTGATGTCCCGTCATGGTTCTCTGATTAATTAGGATCGGTGGTAGTATGTTT
CGTTCTTCTTCATGC----TAGAATTAGTGGTAGTAGGATGGTTCGAGGGCCGGATCGGATGAACTGTAACGAACTCGCA
CGGAATTGCAACGTTGACCT-GAAATGTGTATAAATTTTGGTAATTTGGTCAATCGATGCGTCC---GCTGCGTGGAGGT
ATTTCTGCCGTATGGAACAGGAGATGTGCACACACGGTGCTATCCTCCAAGGCCGCGATGGATCCGTCCGTCTCCTGTCC
ATTTTTGCAAATAGAGATGGACATTGACTCATTCGGT-----------------------------TTACTGAGTCCAGA
TCGTGATCTTTGTTCGAATTATTTACGTAAAATTATGTATCATGAGTAATTTATCTTTCAACTATTTGGAATCATCACTC
CGGTGGAGCTGTCGTTGCCATGCAGCAGCCACTAGTAGAAAAGGGGGCATTGGTCCAGGCCGGGTCAGCCCATTAGTCCC
GGTTCCGTCCAGAACCGGGACC-AATGATGGCATTGGACCCGGTTCGTGAGCCCCAGGGG-CCGGCCGGGCCACGTGGGC
CATTGATCCCGGTTCGTCTGGACCTTTTGGTCCCGGTTGGTGGGACGAACCGGGACCAATAGGCCTCGCTCCCGGCCCAC
CACCATTGGTCCCAGTTTGTGGCTTGAACCGGGACCAAAGGCTGCCCTTTAGTCCCGGTTCATGCCATCAACCGGGACCA
ATTAGGTGCCTATATATACCCCCTCGCGTAAGAGCAGAGCACATTGCTCTATTTTTTCTGGCCGCCAAGGGGGAGAGGGT
TTGGTGGTGCTCTAGCTCACCTCCTATGCGCACAAGGTGTTCGATGGAATGCCCGAGCCACACTACTTAAGCTTTCTCCT
CTCCAAGCTCGACCTCCAAGCTCCATTTTCCTCAATATTTGTCTAGGTTTAGCGGTCCGTCACGCCCTGTACCCGTCTTC
GCCGCCGTCGATCACCCGCGCCGATCTCATCGCCGGCACCACCGTGGTGAGCCTCTAGTTCTTATCTTCTTTCTGAAAGG
AAAAATATTCTTACTTGTATGTTTAGATAAATACTTGTATTATTTTCTTACTTTTATTATTGCATCTTATATAGTGCGAT
GGTTTTGGTATCCGCCCCCGTCGGCCCTCGTCCTGTCTATGAT
>chr1A_3
--ATCTATGATGGAGATGTGGTTTCCTCCATTTGGAAATTTTAGGCAGGCCTTCGTTGTCCGCCGCTTCAACCCTTACGA
CAGATAGTGGCGACGGCATACAATAACTTAGTCCTCGGTGGTGCACCGTTGATAGTGATGGCGTTTC----TCGTTGATT
AATTCTTCCATCTCGATGTTTTTGTATGTTGGCAATGTCTATGGTTCGCAGGCAAAGATTCTCACCATTCATTTTGTACG
TGAAACTAGAGACTGTCGGTGTGGCGGAGCCAAAACTATCATTTGCGGTCATTCTGGTCACGTTGGTGCATCCTTAGGTG
TCGACGTGATGCGCGCGA-------GTTTTATTGGAAGCTGAGCTTTTCTGGTTGTGACA--------TTTTCTTTTCTA
CGGTGGTTCTGCAAAACCTTGGTCATGATAACTTTCCGTCCGTGAACAATGTTAGGATGGCTTGAGCATTGGAGCGGTAC
ACCATCGGCCTATTCGAGAGCCCCAGGGACCCCGGCACAATTTCTTTGTACAGTGATATT--------------------
------------ATGTTTCTACTGCTAGTTTGGTTTATAGACTCAAGTGTTTTTTGTTAAGAAA--AAAGGTACAAACAC
CAAGTTCTTTTGTACTCCA-----TGTCTAATTTTGCATGCCACACAACTA-----------------------------
--------------------------------------------------------------------------------
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--------------------------------------AGTAAAACCTCACGCCAGCAGCACTGAGCCACTGACCATCCC
C-TCTCTGAAGTAGAAGTGAGTGTATGCATGTGTATATGAGCCCTTGCGTCTGTACTGTGTTTAA---------------
------------------------------------------------------------AAAAACAAGAAAGTGGAGTA
CGTATTACCGTGCAGTTTTTGACGCGCACGGCGGGCGCACCCACCTAGAGTTTCCTCCTCCATCGCTCCGCTCCTTCCGT
GCATGCACCCACCGACCCGGTCACCACCAACGCCGACGCGTCTTCCTCCCCGCCTGCCGCCCGGTAATCT----------
-------CTCCATAAATATATACCAAAGTCGTCTTCTCCACCCCGGCCGGTCTCACCCCAAACCCATTCTCCATCCCCAC
CTCCACCTCCTCCGATCCCATCCACCCCCACCCTCACCGCCACCAAGTCAA---AGATCCAACC-TTTACCTCCATCGAC
ATGACGAACCCATCG------CCG------GCGCCAGCCAAGGG---GGCGTCGCTCTGGGGCAGCCAGCTGAAGCAGCT
GCGCTCCCTCTTCGACCGCTTCGACATGGACGGCGACGGCAGCCTCACCCAGCTCGAGCTGGCGGCCCTCCTCCGCTCCC
TCGGCCTACGCCCCACGGGCGACGAGTCGCGCGCGCTGCTCCTCGCCATCGACGCCGACGGCAGCGGCACCGTGGAGTTC
GACGAGCTGGCGCGCGCCATCGCGCCGGTCCTCACCGCCCACGCGCCGCGGCTCGTCGACCAGGCGCAGCTGCTCGAGGT
CTTCCGCGCCTTCGACCGCGACGGCAACGGCTACATCTCCGCCGCCGAGCTCGCGCGCTCCATGGCCAAGCTGGGCCAGC
CGCTCACCTTCGAGGAGCTGCGGACCATGATGCGGGACGCGGACGCGGACGGGGACGGCGTGATTAGCTTCGGGGAGTTC
GCCGCCGTCATGGCCCGGTCCGCGCTCGACTTCCTCGGAGTCCCCGCCGCCTAAGATGTGAGATGACGACCGGGCGGGCT
CCGGCTGGCTCTGA-TCGGATCGAC------------------------------------------CGGTAGTATGATT
C-TTCTTCTTTGGTAGAAGTAGAACTAGTGGTAGTAGGATGGTTCAAGGCCCGGATTGGATCAACTGTAACGAACTCACA
CGGAATTGCAACGTTGACCT-GA-ATGTGTATAAATTTTGGTAATTTGGTCAATCGATGCGTCCGCTGCTTGTTGGTGAT
ATTTCTGCCGTATGGA----------------------------------------------------------------
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-------------------------------------------
>chr1D_509
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------------ATGTTTGTACTGCTAGTTTGGTTAATAGACTCAAGTGTTTTTTCTAAAGGAAAAATAAAGACAAACAC
CATGTAGTACTAGTAGTAGTTTATTTTCTAATTTTGCATGTCATACAACGAGTAATGCTAGACATACATATAGTTACACG
AGGTTTACAAACTGGTGGGTTTTGATTGGAGATTAAGGGGGAGAAAGAGCCCACTCTGCGAAAATCAGGATGGGGGGAGA
GTTTAGTTAGAAAGAAAGAATCCTAATCAGCGTGTAATTGCGCCTAGAAAGAATTCTAATCAGCGTATAATTGCGTGTAA
CTCTTAGTATGTTTACCATTATTGTCGTACAACCAAGTAGTAAAACCTCACGCCAGCAGCACTGACCAT---------CC
CCTCCCTCAAGTAGGTTTACAAGCTGGCCTATAAAAATATTAAAGAGGTTAATTATAGCTTGCTAGTTCCCTCGCAAAAA
AAATTATAGCTTGCTAGTAGTTCACAGCCAACCTGAGGCAGCCACCAAGAAAGGGGAGGTAAAAACAAGAAGCTACGTAC
AC--------TGCAGATTTTGACGCGCACGGCGGGCGCACCCACCTACAGTTTCCTCCTCCATCGCTCCGCTCCTTCCGT
GCATGCACCCACCGACCCGGTCACCACCAACGCCGACGCGTCTTCCTCCCTGCCTGCCGCCCGGTAATCT----------
-------CTCCATAAATATATACCAAAGTCGTCTTCTCCACCCCGG----TCTCACCCCAAACCCATTGTGCATCTCCAT
CCCCACCTCCTCCGATCCCATCCACCCCCACCCTCACCGCCACCAAGTCAA---AGATCCAACC-TTCA-CTCCACCACC
ATGACGAAGCCATCGCCATCCCCATCGCCGGCGCCGGCCAAGGGCGCGGGGTCGCTGCGGGGCAGCCAGCTGAAGCAGCT
GCGCTCCCTCTTCGACCGCTTCGACATGGACGGCGACGGCAGCCTCACCCAGCTCGAGCTGGCGGCCCTGCTCCGCTCCC
TCGGCCTGCGCCCCACGGGCGACGAGTCGCGGGCCCTCCTCCTCGCCATCGACGCCGACGGCAGCGGCACCGTGGAGTTC
GACGAGCTGGCGCGGGCCATCGCGCCGGTGCTCACCGCCCACGCGCCGCGGCTCGTCGACCAGGCGCAGCTGCTCGAGGT
CTTCCGCGCCTTCGACCGCGACGGCAACGGCTACATCTCCGCCGCCGAGCTCGCGCGTTCCATGGCCAAGCTGGGCCAGC
CGCTCACGTTCGAGGAGCTGCGGACCATGATGCGGGACGCGGACGCGGATGGGGACGGCGTGATTAGCTTTGGGGAGTTC
GCCGCCGTCATGGCCAGGTCCGCGCTCGACTTCCTCGGCGTCCCCGCCGCCTGAGATGTGAGATGATGACCGGCCGGGCT
CCGGCTGGCTCTGA-TCGGATGGAC------------------------------------------TGGTAGTATGATT
C-TTCTTCTTTGGT------AGAACTAGTCGTAGTAGGGTGGTTCAAGGCCCGGACTGGATCAACTGTGACGAACTCACA
CGGAGTTGCAACGTTGACCTGGA-ATGTGTATAAATTTTGGTAATTTGGTCAATCGATGCGTCCGCTGCTTGTTGGTGAT
ATCTCTGCCGTATGGA----------------------------------------------TCCGTCCGTC--CTGTCC
ATTTTTGCAAGTAGAGATGGGCATTGACTCATTCGGTTTATTACTGCGTCCTGATCATTCGGTTTATTACTGCGTCCTGA
TTATGATCTTTGTTCGAATTATTTACCG--------------TGACTAATTTATCTTTCAACCTTTTGGAATCATCACTG
CGGTGGAGCTGTCGTTGCCATGCAGCAG----------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>chr4B_2084
CAGTAGC-------------------------------------------------------------------------
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----------------------------CCATTAGTAGAAAAGGGGGCATTGGTCCAGGCCGGGTCAGCCCATTAGTCCC
GGTTCAGTCCAGAACCGGGACC-AATGGTGGCATTGGACCCGGTTCGTGAGCCCCGGGGG-CCAGCCGGGCCACGTGGGC
CATTGGTCCTGGTTCGTCTGGACCTTTTGGTCCCGGTTGGTGGGACGAACCGGGACCAATGGGCCTCGCTCCTGGCCCAC
CACCATTGGTCCCAGTTGGTGGCTTGAACCGGGACCAAAGGCTGCCCTTTAGTCCCGGTTCATGCCACCAACCGGGACCA
ATGAGGTGCCTATATATACCCCCTCGCGTAAGAGCAGAGCACACTGCTCTGTTTTTTCTAGCCGCCGAGGAGGAGAGGGC
TTGGTGGTGCTCTAGCTCACCTCCTATGCACACAAGGTGTTCGATGGAATGCCCGAGCCACATGACTTAAGCTTTCTCCT
CTGCAAGCTCGACCTCCAAGCTCCATTTTCCTCAATATTTGTCTAGGTTTAGCGGTCTGTCACGCCCTGTCCCCGTCTTC
ACCGCCGTCGATCACCCGCGCCGATCTCATCGCCGGCACCACCACGGTGAGCCTCTTGTTCTTATCTTCTTTCTGAAAGG
AAAAATATTCTTACTTGTATGTTTAGATAGATACTTGTATTATTTTCTTACTTTTATTATTGCATCTTATATAGTGCGAT
GGTTTTGGTATCCGCCCCCGTCGGCCCTCGTCCTGTCTATGAT
>chrUn_2088
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--------------------------AGCCACTAGTAGAAAAGGGGGCATTGGTCCAGGCCGGGTCAGCCCATTAGTCCC
GGTTCCGTCCAGAACCGGGACC-AATGATGGCATTGGACCCGGTTCGTGAGTCCCGGGGG-CCGGCCGGGCCACGTGGGC
CATTGGTCCAGGTTCGTCTGGACCTTTTGGTCCCGGTTGGTGGGACGAATCGGGACCAATGGGCCTCGCTCCTGGCCCAT
CACCATTGGTCCCGGTTTGTGGCTTGAACCGGGACCAAAGGCTGCCCTTTAGTCCCAGTTCATGCCACCAACCGGGACCA
ATTAGGTGCCTATATATACCCCCTCACGTAAAAGCAGAGCACACTGCTCTGTTTTTTCTGGCCGCCGAGGGGGAGAGGGC
TTGGTGGTGCTCTAGCTCACCTCCTATGCACACAAGGTGTTCGATGGAATGCCCAAGCCACACTACTTAAGCTTTCTCCT
CTCCAAGCTCGACCTCCAATCTCTATTTTCCTCAATATTTGTCTAAGTTTAGCGGTCCGTCACGCCCTGTACCCGTCTTC
ACCGCCATCGATCACCTGCGTCGATCTCATCGCCGGCACCACGGTGGTGAGCCTCTTGTTCTTATCTTCTTTCTGAAAGG
AAAAATATTCTTACTTATATGTTTAGATAGATACTTGTATTATTTTCTTACTTTTATTATTGCATCTTATATAGTGCGAT
GGTTTTGGTATCCACCCCCGTCGGCCCTCGTCCTGTCTATGAT
>chr4B_2089
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---------------------------GCCACTAGTAGAAAAGGGGGCATTGGTCCAGGCCGGGTCAGCCCATTAGTCCC
GGTTCCATCCAGAACCGGGA-C-AATGATGGCATTGGACCCGATTCGTGAGCCCCGGGGG-CCGGCCGGGCCACGTGGGC
CATTGGTCCCGGTTCGTCTGGACCTTTTGGTCCCGGTTGGTGGGACGAACCGGGACCAATGGGCCTCGCTCCTGGCCCAC
CACCATTGACCCCGGTTTGTGGCTTGAACCGGGACCAAAGGCTGCCCTTTAGTCCCGGTTCATGCCACCAACCGGGACCA
ATTAGGTGCCTATATATACCCCCTCGCGTAAGAGCAGAGCACACTGCTCTGTTTTTTCTGGCCGCCGAGGGGGAGAGGGC
TTGGTGGTGCTCTAGCTCACCTCCTATGCACACAAGGTGTTCGATGGAATGCCCGAGCCACACTACTTAAGCTTTCTCCT
CTCCAAGCTCGACCTCCAAGCTCCATTTTCCTTAATATTTGTCTAGGTTTAGCGGTCCGTCACGCCCTGTACCCGTCTTC
ACCGCCGTCGATCACCCACGCCGATCTCATCACCGGCACCACCGTGGTGAGCCTCTTGTTCTTATCTTCTTTCTGAAAGG
AAAAATATTCTTACTTGTATGTTTAGATAGATACTTGTATTATTTTCTTACTTTTATTATTGCATCTTATATAGTGCGAT
GGTTCTGGTATCCGCCCCCGTCAGCCCTTGTCCTGTCTATGAT
>chr5B_2090
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----------------------------CCACTAGTAGAAAAGGGGGCATTGGTCCAGGCTGGGTCAGCCCATTAGTCCC
GGTTCAGTCCAGAACCGGGA-CCAATGGTGGCATCGGACCCGGTTCGTGAGCCCCAGGGG-CCGGCCAGGCCACGTGGGC
CATTGGTCCCGGTTCGTCTGGACCTTTTGGTCCCGGTTGGTGGGACGAACCGGGACCAATGGGCCTCGCTCCTGACCCAC
CACCATTGGTCCCGGTTGGTGGCTTGAACCGGGACCAAAGGCTGCCCTTTAGTCCCGGTTCATGCCACCAACCGGGACCA
ATGAGGTGCCTATATATACCCCCTCGCGTAAGAGCAGAGCACACTGCTCTGTTTTTTCTGGCCGCCAAGGGGGAGAGGGC
TTGGTGGTGCTCTAGCTCACCTCCTATGCACACAAGGTGTTCGATGGAATGCTCGAGCCACAGTACTTAAGCTTTCTCCT
CTCCAAGCTTGACCTCCAAGCTCCATTTTCCTCAATATTTGTCTAGGTTTAGCGGTCCATCACGCCCCGTACCCGTCTTC
ACCGCCGTCGATCACCCGCGCCGATCTCATCGCCGGCACCACCATGGTGAGCCTCTTGTTCTTATCTTCTTTCTAAAAGG
AAAAATATTCTTACTTGTATGTTTAGATAGATACTTGTATTATTTTCTTACTTTTATTATTGCATCTTATATAGTGCGAT
GGTTTTGGTATCCGCCCCCGTCGGCCCTTGTCCTGTCTATGAT
>chr2B_2090
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----------------------------CCACTAGTAGAAAAGGGGGCATTGGTCCAGGCCGGGTCAGCCCATTAGTCCC
GGTTCCGTCCAGAACCGGGA-CCAATGGTGGCATTGGACCCGGTTCGTGAGCCCCGGG-G-CCGGTCGGGCCACGTGGGC
CATTGGTCCCGGTTCGTCTGGACCTTTTGGTTCCGGTTGGTGGGAAGAACCGGGACCAATAGGCCTCGCTCCTGGCCCAC
CACCATTGGTCCCGGTTTGTGGCTTGAACTGGGACCAAAGGCTTCCCTTTAGTCCCGGTTCATGCCACCAACCTGGACCA
ATTAGGTGCCTATATATACCCCCTCGCGTAAGAGTAGAGCACACTGCTCTGTTTTTTCTGGCCGCCGAGGGGGAGAGGGC
TTGGTGGTGCTCTAGCTCAGCTCCTATGCACACAAGGTGTTCGATGGAATGCCCGAACCACACTACTTAAGCTTTCTCCT
CTCCAAGCTCGACCTCCAAGCTCCATTTTCCTTAATATTTGTCTAGGTTTAGCGGTCCGTCACGCCCTGTACCCGTCTTC
ACTGCTGTCGATCACCCGCACCGATCTCATCGCCGGCACCACCGTGGTGAGCCTCTTGTTCTTATCTTCTTTCTGAAAGG
AAAAATATTCTTACTTGTATGTTTAGATAGATACTTGTATTATTTTCTTACTTTTATTATTGCATCTTATATAGTGCGAT
GGTTTTGGTATCCGCCCCCGTCGTCCCTCGTCCTGTCTATGAT
>chr1B_2091
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-----------------------------CACTAGTAGAAAAGGGGGCAATGGTCCAGGCCGGGTCAACCCATTAGTCCC
GGTTCAGTCTAGAACCGGGA-CCAATGGTGGCATTGGACCCGGTTCGTGAGCCCCGGG-GGGCGGCCGGGCCACGTGGGC
CATTGGTCCCGGTTCGTCTAGACCTTTTGGTCTCGGTTGGTGGGACGAACCGGGATCAATGGGCCTCGCTCCTGGCCCAC
CACCATTGGTCCCGGTTGGTGGCTTGAACCGGGACGAAAGGCTGCCCTTTAGTCCCGGTTCATGCCACCAACCGGGACCA
ATGAGGTGCCTATATATACCCCCTCGCGTAAGAGCAGAGCACACTGCTCTGTTTTTTCTGGCCGCCGAGGGGGAGAGGGC
TTGGTGGTGCTCTAGCTCACCTCCTATGCACACAAGGTGTTCGATGGAATGCCCGAGCCACACTACTTAAGCTTTCTCCT
CTCCAAGCTCGACCTCCAAGCTCCATTTTCCTCAATATTTGTCTAGGTTTAGCGGTCTGTCACGCCCCGTCCCCGTCTTC
ACCGCCGTCGATCACCCGCGCCGATCTCATCGCCGGCACCACCGTGGTGAGCCTCTTGTTCTTATCTTCTTTCTGAAAGG
AAAAATATTCTTACTTGTATGTTTAGATAGATACTTGTATTATTTTCTTACTTTTATTATTGCATCTTATATAGTGCGAT
GGTTTTGGTATCCGCCCCCGTCGGCCCTCGTCCTGTCTATGAT
>chr5B_2091
--------------------------------------------------------------------------------
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-----------------------------CACTAGTAGAAAAGGGGGCATTGGTCCAGGCCGGGTCAGCCCATTAGTCCC
GGTTCTGTCCAGAACCGGGA-CCAATGGTGGCATTGGACCCAGTTCGTGAGCCCCGGG-GGCCGGCCGAGCCACGTGGGC
CATTGGTCCCGGTTCGTCTGGACCTTTTGGTCCCGGTTGGTGGGACGAACCGGGACCAATAGGCCTCGCTCCTGGCCCAA
CACCATTGGTCCCGGTTTGTGGCTTGAACCGGGACCAAAGGCTGCCCTTTAGTCCCGATTCATGCCACCAACCGGGACCA
ATTAGGTGCCTATATATACCCTCTCGTGTAAGAGCAGAGCACACTGCTCTGTTTTTTCTGGCCGCCGAGGGGGAGAGGGC
TTGGTGGTGCTCTAGCTCACCTCCTATGCACACAAGGTGTTCGATGGAATGCCCGAGCCACACTACTTAAGCTTTCTCCT
CTCCAAGCTCGACCTCCAAGCTCCATTTTCCTTAATATTTGTCTAGGTTTAGCGGTCCGTCACGCCCTGTACCCGTCTTC
ACCGCCGTCGATCACCCGCACTGATCTCATCGCCGGCACCACCACGGTGAGCCTCTTGTTCTTATCTTCTTTCTGAAAGG
AAAAATATTCTTACTTGTATGTTTAGATAGATACTTGTATTATTTTCTTACTTTTATTATTGCATCTTATATAGTGCGAT
GGTTTTGGTATCCGCCCCCGTCGGCCCTCGTCCTGTCTATGAT
>chr6B_2091
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-----------------------------CACTAGTAGAAAAGGGGGCAATGGTCCAGGCCGGGTCAGCCCATTAGTCCC
GGTTCAGTCCAGAACCGGGA-CCCATGGGGGCATTGGACCCGGTTCGTGAGCCCCGGG-GGCCGGCCGGGCCACGTGGGC
CATTGGTCCCGGTTCGTCTGGACCTTTTGGTCCCGGTTGGTGGGACAAACTGGGACCAATGGGCCTCGCTCCTGGCGCAC
CACCATTGGTCCCGGTTGGTGGCATGAACCGGGACCAAAGGCTGCCCTTTAGTCCCGGTTCATGCCATCAACCGCGATCA
ATGAGGTGCCTATATATACCCCCTCGCGTAAGAGCAGAGCACACTGCTCTGTTTTTTCTGGCCGCCGAGGGGGAGAGGGC
TTGGTGGTGCTCTAGCTCACCTCCTATGCACACAAGGTGTTCGATGGAATGCCCGAGCCACACTACTTAAGCTTTCTCCT
CTCCAAGCTCGACCTCCAAGCTCCATTTTCCTCAATATTTGTCTAGGTTTAGCGGTCCGTCACGCCCCGTCCCCGTCTTC
ACCGCCGTCGATCACCCGCGCCGATCTCATCGCCGACACCACCGTGGTGAGCCTCTGGTTCTTATCTTCTTTCTGAAAGG
AAAAATATTCTTACTTGTATGTTTAGATAGATACTTGTATTATTTTCTTACTTTTATTATTGCATCTTATATAGTGCGAT
GGTTTTGGTATCCGCCCCCGTCGGCCCTCGTCCTGTCTATGAT
>chr7B_2091
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-----------------------------CACTAGTAGAAAAGGGGGCATTGGTCCAGGCCGGGTCAGCCCGTTAGTCCC
GGTTCAGTCCAGAACCGGGA-CCAATGGTGGCATTGGACCCGGTTCGTGAGCCCCGGG-GGCCGGGCGGGCCACATGGGC
CATTGGTCCCGGTTCGTCTGGACCTTTTGGTCCCGGTTGGTGGGACGAACCGGGACCAATGGGCCTCGCTCCTGGCCCAC
CAACATTGGTCCCGGTTGGTGCCACGAACCGGGACCAAAGGCTGCCCTTTAGTCCCGGTTCATGCCACCAACCGGGACAA
ATTAGGTGCCTATATATACCCCCTCGCGTAAGAGCAGAGCACACTGCTCTGTTTTTTCTGGCCGCCGAGGGGGAGAGGGC
TTGGTGTTGCTCTAGCTCACCTCCTATGCACACAAGGTGTTCGATGGAATGCCCGAGCCACACTACTTAAGCTTTCTCCT
CTCCAAGCTCGACCTCCAAGCTTCATTTTCCTCAATATTTGTCTAGGTTTAGCGGTCCGTCACGCCCCGTACCCGTCTTC
ACCGCCGTCGATCACCCGCGCCGATCTCATCGCCGGCACCACCGTGGTGAGCCTCTTGTTCTTATCTTCTTTCTAAAAGG
AAAAATATTCTTACTTGTATGTTTAGATAGATACTTGTATTATTTTCTTACTTTCATTATTGCATCTTATATAGTGCGAT
GGTTTTGGTATCCGCCCCCGTCGGCCCTCGTCCTGTCTATGAT
>SNPs
-S---------------------SS-------SS-----------S----------------S-----------------
---S-----------S----------S------------------SS-SS---------------SSSSSS---S-----
-----S----------------------SS-SSSS-----------------------------S---------------
----------------------------------------S-----------SS-------S------------S-----
----S--------SSSSSSSSSSSS--------------SS------S-----------SSSSSSSSS--------SSSS
-------SS---------------------------S-----S--S--------S---------------S------S--
S--------S----------------------S--------------S------S-SS-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-----------S----------------------------------------S-----S---------
-----------------------------S-------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
-------------------------------S------S-SSS-------------------------SS----------
------------------------------------------------------------------------S-------
------------S----------------SSSSSS-SSS-----------------------------------------
----------S----------------------------------------------------SSSSS-SSSSSSSSSSS
SSSSSSS-------------------------------------------------------------------------
----------S-------S-------------------SSSS---------SSS----S-----S---------------
------------------------------S-------S-----------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-------------------------S--------------S--S------------------------------------
--------------------------------------------------------------------S--S--------
-------------SS----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S--
-S--------SSSSS---------S--------------------S---S------S----S---------------S--
-----------------------S----------------------------------------------SSS---S-S-
----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------SS------
----------S---------S---------------------------------------------------S----S--
-SS-----------------------SSSSSSSSSSSSSSSS---S----------------SS---------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
-------------------------------------------S------S----------------------------S
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------S-----------------------
-----------------------------S--------------------------------------------------
-------------------------------------------
>forward_339
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TCGAAGTGATGCGTCATGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_2232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CGTGGAGGT
ATTTCTGCCGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
