>input_sequence_67856
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-----------------------------------------------------------------------------ACA
CAACACACACACACACACACACACACACAC-ACACACACAACCAGTACTAGATCCACAAGCCAGC----AGAAAGGAAGA
AGATGATGAGCACCAAGGCCCTCACACTCGGCGCGGCCGTCGTCCTCGCCATCGCCGTGGCGGGCGCGCACGCCGAGCAG
TGCGGCCACGCGGCCGACGGCATGGAGTGCCCCAACAACCTCTGCTGCAGCGCGTGGGGGTACTGCGGCATGGACGCCAA
CTACTGCGGCGACGGCTGCCAGAGCGGCGCCTGCTACGAGCCCAAACGCTGCGGCGCCCAGGCCGGGGGCAACGCCGTGA
CGTGCCCCAACAACCACTGCTGCAGCGGCCACGGGTTCTGCGGCTACGGCCAGGAGTACTGCGGCGCCGGCTGCCAGAAC
GGGCCTTGCCGCGCCAACATCAAGTGCAGC---------GCCGACAAGCCGTGCCTGAGCAACTTCTGCTGCAGCCAGTA
CGGATACTGCGGGCTCGGCGTCGAGTTCTGCGGCCAGGGCTGCCAGAGCGGCGCCTGCCATGACGCCGTTGGCGCCGCCG
CCCTGCCGCTCAGCTCCATAGTGCAGGGGTGATCTTGAACTGCACATGGCTACTAGTATTGCGACGGGATCAGGTGAGGA
GATGAGTTGTGGCAATGTCGATCGTTGCCACGTCTTCTTCACTGGCTAGTTTGCGTTTTCTTCGTCTTTACAATCGTTCC
CATCATGCATGCACGCATGCATGATTAGCGTTCGGGAACCTCAAATAATGCGTGTCGCGC------CATGCATGCCCCGT
CCTTGTAATCTTTGTAATCCAATAAATCTGAATCTCGTTG----------------------------------------
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>chr3D_1_TraesCS3D01G391100
GAGCGGCCGCCGAGGGCAGGGTGAGCATGGCCGACAAACTCCTC-TCCTGTACACCGGCGACAGCTACAACCTGATCTCT
CCCGTCGCTACACTCCAGGCGGAGGTTCATGGGAACTAAGTACTGAGTATAAGTTAATCAACCAGCAAGGAAGTAATTCA
ACAAGCACTTGAACAACACG------GAGATGTAGTTGAAGGCCCATTCCAATCCTTCTTTTTGTGAAATTTGTAGCAAC
AACAGAGCTCAGTAGAGCAGCGAATGCAGCAACGTCACACCAACTGCACTGCTCTCTGCCCTGACATAGCAGGGCGTGCA
TCCCGTCGCCG---GGCGGTAGTGCCTCTGCACCCTAGACCCTAGTTCCTCTCCGGCTGCGGTTGAGGCGGGGTCGCGCG
GCAAGCCGCCTGTTGCACGCCCTGCGTAGCCGACTAGCCCGCAGGAACTG-------GTCCTCGACAACGCCGTTGTCAC
GTGGTTCGCTTTGTCCATGGCGACGCCGTCCTCGAGGAACTGGCCCAAGAAGAGAGATTAATCGTGTTTTCTTTTTGTTT
TCTATTCAAACAAAGAATTGTATACACTTACC-TAACAGAAAAACTAACTAAAACTGGTTTTCCTAAAAATCCTCTGAAA
ACTGGTTTTCAA--AAC--------TCACGTCTAATTCTTGGCATCCAAACAACCAAAGCCACATGGAGAGCTAGGGAAG
CAGGTTTGGACTTGCATTTTTTTC---CGGTCATGTTAACTGGTTGATGTTCAGTGGGATGAGATCCAAATCCAAAGGAT
GACAGTTATTGACGAAAATTGCACCAAAAATAAAGAACTGCCATGCTTTTTTCTGAAAACTGCCATCA-CCCCTAATAAT
ACCATACGTGTTCGCAAATGCCAAGCTAGGCAGCGAACGTTCGCTGGTGATTAGTATC-----TTTTTTTGCAAGAGGTG
CTTCTCCTACATTAATAAACTGAACTGAACCAGAACGCCTATATAAAGAGAGGAGAGCACCACCAGTTTACACACACACA
CAACACACACACACACACACACACACACAC-ACACACACAACCAGTACTAGATCCACAAGCCAGC----AGAAAGGAAGA
AGATGATGAGCACCAAGGCCCTCACACTCGGCGCGGCCGTCGTCCTCGCCATCGCCGTGGCGGGCGCGCACGCCGAGCAG
TGCGGCCACGCGGCCGACGGCATGGAGTGCCCCAACAACCTCTGCTGCAGCGCGTGGGGGTACTGCGGCATGGACGCCAA
CTACTGCGGCGACGGCTGCCAGAGCGGCGCCTGCTACGAGCCCAAACGCTGCGGCGCCCAGGCCGGGGGCAACGCCGTGA
CGTGCCCCAACAACCACTGCTGCAGCGGCCACGGGTTCTGCGGCTACGGCCAGGAGTACTGCGGCGCCGGCTGCCAGAAC
GGGCCTTGCCGCGCCAACATCAAGTGCAGC---------GCCGACAAGCCGTGCCTGAGCAACTTCTGCTGCAGCCAGTA
CGGATACTGCGGGCTCGGCGTCGAGTTCTGCGGCCAGGGCTGCCAGAGCGGCGCCTGCCATGACGCCGTTGGCGCCGCCG
CCCTGCCGCTCAGCTCCATAGTGCAGGGGTGATCTTGAACTGCACATGGCTACTAGTATTGCGACGGGATCAGGTGAGGA
GATGAGTTGTGGCAATGTCGATCGTTGCCACGTCTTCTTCACTGGCTAGTTTGCGTTTTCTTCGTCTTTACAATCGTTCC
CATCATGCATGCACGCATGCATGATTAGCGTTCGGGAACCTCAAATAATGCGTGTCGCGC------CATGCATGCCCCGT
CCTTGTAATCTTTGTAATCCAATAAATCTGAATCTCGTTGCAATTAACGGAGGGCGTACTGTAGTGTTATCTTTAGGCTA
ATCTCTGTTCGAGAGGCGGAGGTTAACCAAAGCACCTCACAACCTCAAAGTCTCGGCCATTTTTTTAGCCTCAGCCAACG
AAGCATGAGCTCAATCACTAAGTGGTTTTCCTTAAGGTGTCCCGGAGCATAAATCCACACCTTTTAAGGTCCTTGATAAG
GGCATGGGTGTCCCAATCTTACAATGAGAAATATTTTGTCGATTTGGATGGAGAACGGCTTTGACGCCAGTCTCATGAAT
ATTACCGTCAATGTTG------GATGCATGGTTAGCATGACCAAGAAGGTCTACCTGCAAGTAAT-AAAAGACAATCAAG
AATGTGGTGGAAACAATCTGGATATTGCGAGTATAGATGAAATGTTGATTATCTCAAACGGAGTACACAAAGGTGCAACA
ACGACTAACTTTTTGGCTAAATAAAATCAAAAGAAAACACTATGAGGTTGATCTATCTATATAGGACTAAGGGGTGGCGG
CCAATGGGGTTGATGCCCATCCAATGACAGCAAACAACCCTAAGTTATACAAGGCCCATAGGGTTCGATTGTTATTTGTG
TGCATATTAAATTCCCTCTTAAGTAATGAAATTCGGGCACTTCTGCCATATTTTCAGAAAACATGGAAAATAAAAAAAAT
-TCTCAAGCAAACGCACAGTAGTTAGGCGTTTTCATATGTTAGAGCAACTCTAGCAGACCCCGCAAAACACGCAGACCCG
CAAAATTCCGGCGAGTATGCGGGCTCGGCCCAATTTTCCGGCCAGAACAGAGCCCGCATACTCGCCCGGCCCGCAAAATT
TTTTGCCGCGGCCCGCAAACCGCACGCCCTGACCGCTATAACTGCGGTTTCGCGACTCGTTTGCGGGTTCAAACCCTATC
CCTCGCCGTCGCCGAGCCACGCGATTCCCCTTCCCCCTCTCCACATTTCTCGCCGTCGGTGACCACCTGCCCCGCCTCCA
GCCGCCAT
>chr3D_1
GAGCGGCCGCCGAGGGCAGGGTGAGCATGGCCGACAAACTCCTC-TCCTGTACACCGGCGACAGCTACAACCTGATCTCT
CCGGTCGCTACACTCCAGGCGGAGGTTCATGGGAACTAACTACTGAGTATAAGTTAATCAACCAGCAAGGAAGTAATTCA
ACAAGCACTTGAACAGCACG------GAGATGTAGTTGAAGGCCCATTCCAATCCTTCTTTTTGTGAAATTTGTAGCAAC
AACAGAGCTCAGTAGAGCAGCGAATGCAGCAACGTCACACCAACTGCACTGCTCTCCGCCCTGTCATAGCAGGGCGTGCA
TCCCGTCGCCG---GGCGGTAGTGCCTCTGCACCCTAGACCCTAGTTCCTCTCCGGCTGCGGTTGAGGCGGGGTCGCGCG
GCAAGCCGCCTGTTGCACGCCCTGCATAGCCGACTAGCCCGCAGGAACTG-------GTCCTCGACAACGCCGTTGTCGC
GTGGTTCGCTTGGTCCATGGCAACGCCGTCCTCGAGGAACTGGCCCAAGAAGAAAGACTAATCGTGTTTTCTTTTTGTTT
TCTATCCAAACAAAGAATTGTATACACTCACC-TAACAGAAAAACTAACTAAAACTGGTTTTCCTAAAAATCCTCTGAAA
ACTGGTTTTCAAAAAAC--------TCACGTCTAATTCTTGGCATCCAAACAACCAAAGCCACATGGAGAGCTAGGGAAG
CAGGTTTGGACTTGCATTTTTTTC---CGGTCATGTTAACTGGTTGATGTTCAGTGGGATGAGATCCAAATCCAAAGGAT
GACAGTTATTGACGAAAATTGCACCAAAAATAAAGAACTACCATGCTTTTTTCTGAAAACTGCCATCA-CCCCTAATAAT
ACCATACGTGTTCGCAAATGCCAAGCTAGGCAGCGAACGTTCGCTGGTGATTAGTATC-----TTTTTTTGCAAGAGGTG
CTACTCCTACATTAATAGACTGAACTGAACCAGAACGCCTATATAAAGAGAGGAGAGCACCACCAGTTT-----------
----------------------ACACACAC-ACACACACAACCAGTACTAGATCCACAAGCCAGC----AGAAAGGAAGA
AGATGATGAGCACCAAGGCCCTCACACTCGGCGCGGCCGTCGTCCTCGCCATCGCCGTGGCGGGCGCGCACGCCGAGCAG
TGCGGCCACGCGGCCGACGGCATGGAGTGCCCCAACAACCTCTGCTGCAGCGCGTGGGGGTACTGCGGC-----------
----------GACGGCTGCCAGAGCGGCGCCTGCTACGAGCCCAAACGCTGCGGCGCCCAGGCCGGGGGCAACGCCGTGA
CGTGCCCCAACAACCACTGC------------------------------------------------------------
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>chr3B_1
GAGCGGCCGCCGAGGGCAGGGTGAGCATGGCCGACAAACTCCTCTTCCTGTACACCGGCGACGGCTACAACCTGATCTCT
CCGGTCGCTGCACTCCAGGCGGAGGTTCATGGGAACTAACTACTGAGTATAAGTTAATCAACCAGTAAGGAAGTAATTCA
ACAAGCACTTGAACAGCACGAGAACGGAGATGTAGTTGAAGGCCCATTCCAATCCTCCTTTTTGTGAAATTTGTAGCAAC
AACAGAGCTCAGTAGAGCAGTGAATGCAACGCCGTCACACCAACTGCACTGCTCTCCGCCCTGACATAGCAGGGTGTGCA
TCCCGTCGCCG---GGTGGTAGTGCCTCTGCACCCTAGACCCTAGTTCCTCTTCGGCTGCGGTTGAGGCGGGGTCGCGCG
GCAAGCCGCCTGTTGCACGCCCTGCGTAGCCGACTAGCCCGCCACTTGGTTCGCTTTGTCCTCGACAACGCCGTTGTCGT
GTGGTTCGCTTGGTCCATGGCGACGCCGTCCTCGAGGAATTGGTCCAAGAAGAGAGACTAATCGTGTTTTCTTTTTGTTT
TCTATCCAAACAAAGAATTGTATACACTCACCTTAACAGAAAAACTAACTAAAACTGGCTTTCCTAAAAATCCTGTGAAA
ACTGGTTTTCTAAAAACTCACGTAGTCACGTCTAATTCTTGGCATCCAAACAACCA------------------------
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>chr5D_1
GAGCGGCCGCCGAGGGCAGGGTGAGCATGGCCGACAAACTCCTCTTCCTGTACACCGGCGACGGCTACAACCTGATCTCT
CCGGTCGCTGCACTCCAGGCGGAGGTTCATGGGAACTAACTACTGAGTATAAGTTAATCAACCAGCAAGGAAGTAATTCA
ACATGCACTTGAACAGCACGAGAACGGAGATGTAGTTGAAGGCCCATTCCAATCCTCCTTTTTGTGAAATTTGTAGCAAC
AAGAGAGCTCAGTAGAGCAGCGAATGCAGCGACGTCACACCAACTGCACTGCTCTCCGCCCTGACATAGCAGGGCGTGCA
TCCCGTCGCCG---GGCGGTAGTGCCTCTGCACCCTAGACCCTAGTTCCTCTCCGGCTGCGGTTGAGGCGGGGTCGCGCG
GCAAGCCGCCTGTTGCACGCCCTGCGTAGCCGACTAGCCCGCCACTTGGTTCGCTTCGTCCTCGACAACGCCGTTGTCGC
GTGGTTCGCTTGGTCCATGGCGACGCCGTCCTCGAGGAACTGGCCCAAGAAGAGAGACTAATCGTGTTTTCTTTTTGTTT
TCTATCCAAACAAAGAATTGTATACACTCACCTTAACAGAAAAACTAACTAAAACTGGTTTTCCTAAGAATCCTCTGAAA
ACTGGTTTTCTGAAAAC--------TCACGTCTAATTCTTGGCATCCAAACAACCA------------------------
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>chr7B_1
GAGCGGCCGCCGAGGGCAGGGTGAACATGGCCGACAAACTCCTCTTCCTGTACACCGGCGACAGCTACAACCTGATCTCT
CTGGTCGCTGCACTCCAGGCGGAGGTTCATGGGAACTAACTACTGAGTATAAGTTAATCAACCAGCAAGGAAGTAATTCA
ACAAGCACTTGAACAGGACGAGAACGGAGATGTAGTTGAAGGCCCATTCCAATCCTCCTTTTTGTGAAATTTGTAGCAAC
AACAGAGCTCAGTAGAGCAGCGAATGCACCGACGTAACACCAACTGCACTGCTCTCCGCCCTGACATAGCAGGGCGTGCA
TCCCGTCGCCG---GGCGGTAGTGCCTCTGCACCCTAGACCCTAGTTCCTCTCCGGCTGCGGTTGAGGCGGGGTCGCGAG
GCAAGCCGCCTGTTGCACGCCCTGCGTAGCCGACTAGCCCGCCACTTGGTTCGCTTCGTCCTTGACAACGCCGTTGTCGT
GTGGTTCGCTTGGTCCATGGCGACGCCGTCCTCGAGGAACTGGCCCAAGAAGAGAGACTAATCGTGTTTTCTTTTTGTTT
TCTATCCAAACAAAGAATTGTATACACTCACCTAAAAAGAAAAACTAACTAAAACTGGTTTTCCTAAAAATCCTCTGAAA
ACTGGTTTTCTAAAAAC--------TCACGTCTAAGTTTTGGCACCCAAACAACCA------------------------
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>chr7B_1
GAGCGGCCGCCGAGGGCAGGGTGAGCATGGCCGACAAACTCCTCTTCCTATACACCGGCGACGGCTACAACCTGATCTCT
CCGGTCGCTGCACTCCAGGCGGAGGTTCATGGGAACTAACTACTGAGTACAAGTTAATCAACCAGCAAGGAAGTAATTCA
ACAAGCACTTGAACAGCATGAGAACGGAGATGTAGTTGAAGGCCCATTCCAATCCTCCTTTTTGTGAAATTTGTAGC---
--------TCAGTAGAGCAGCAAATGCTGCGACGTCACACCAACTGGACTGCTCTCCGCCCTGACATAGCAGGGGGTGCA
TCCCGTCGCCG---GGCGGTAGTGCCTCTGCACCCTACACCCTAGTTCCTCTCCGGCTGCGGTTGAGGCGGGGTCGCGCG
GCAAGCCCCCTGTTGCACGCCCTGCGTAGCCGACTAGCCCGCCACTTGGTTCGCTTCGTCCTCGACAACGCCGTTGTCGC
GTGGTTCGCTTGGTCCATGGTGACGCCGTCCTCAAGGAACTGGCCCAAGAAGAGAGACTAATCGTGTTTTCTTTTTATTT
TCTATCCAAACAAAGAATTGTATACACTCACCTTAACAGAAAAACTAACTAAAACTGGTTTTCCTAAAAATCCTCTGAAA
ACTGGTTTTCTAAAAAC--------TCACGTCTAATCCTTGGCATCCAAACAACCA------------------------
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>chr4A_1
GAGCGGCCACCGAGGGCAGGGTGAGCATGGCCGACAAACTCCTCTTCCTGTACACCGGCGACGGCTACAACCTGATCTCT
CCGGTCGCTGCACTCCAGGCGGAGGTTCATGGGAACTAACTACTGAGTATAAGTTAATCAACCAGCAAGGAAGTAATTCA
ACAAGCACTTGAACAGCACGAGAACGGAGATGTAGTTGAAGGCCCATTCCAATCCTCCTTTTTGTGAAATTTGTAGCAAC
AGCAGAGCTCAGTAGAGCAGCGAATGCAGCGACGTCACACCAACTGCACTGCTCTCCGCCCTGACATAGCAGGGTGTGCA
TCCCGTCGCCG---GGTGGTAGTGCCTCTGCACCCTAGATCCTAGTTCCTCTCCGGCTGCGGTTGAGGCGGGGTCGCATG
GCAAGCCGCCTGTTGCACGCCGTGCGTAGCCGACTAGCCTGCCACTTGGTTCGCTTTGTCCTCGACAACGCCGTTGTCGT
GTGGTTCGCTTGGTCCATGGCGACGCCGTCCTCGAGGAACTGGCCCAAGAAGAGAGACTAATCGTGTTTTCTTTTTGTTT
TCTATCCAAACAAAGAATTGTATACACTCACCTTAACAGAAAAACTAACTAAAACTGGTTTTCCTAAAAATCCTCTGAAA
ACTGGTTTTCTAAAAAC--------TCACGTCTAATTCTTGGCATCCAAACAACCA------------------------
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>chr1B_1
GAGCGGCCGCCGAGGGCAGGGTGAGCATGGCCGACAAACTCCTCTTTCTGTACACCTGCGACGGCTACAACCTGATCTCT
CCGGTCGCTGCACTCCAGGCGGAGGTTCATGGGAACTAACTACTGAATATAAGTTAATCAACCAGCAAGGAAGTAATTCA
ACAAGCACTTGAACAGCACGAGAACGGAGATGTAGTTGAAGGCCCATTCCAATCCTCCTTTTTGTGAAATTTGTAGCAAC
AACAGAGCTCAGTAGAGGAGCGAATGCAGCGACGTCACACCAACTGCACTGCTCTCCGCCCTGACATAGCAGGGTGTGCA
TCCCGTCACCG---GGTGGTAGTGCCTCTGCACCCTAGACCCTAGTTCCTCTCCGGCTGTGGTTGAGGCGGGGTCGCGCG
GCAAGCCGCCTGTTGCACGCCCTGCGTAGCCGACTAGCCCGCCACTTGGTTCGCTTTGTCCTCGACAACGCCGTTGTTGT
GTGGTTCGCTTGGTCCATGGCGACGCCGTCCTCGAGGAACTGGCCCAAGAAGAGAGACTAATCGTGTTTTCTTTTTGTTT
TCTATCCAAACAAAGAATTGTATACACTCACCTTAACAGAAAAACTAACTAAAACTGGTTTTCCTAAAAATCCTCTGAAA
ACTGGTTTTCTAAAAAC--------TCACGTCTAATTCTTGGCATCCAAACAACCA------------------------
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>chr1B_1
GAGCGGCCGCCGAGGGCAGGGTGAGCATGGCCGACAAACTCCTCTTCCTGTATAGCTGCGACGGCTACAACCTGATCTCT
CCGGTCGCTGCACTCCAGGCGGAGGTTCATGGGAACTAACTACTGAATATAAGTTAATCAACCAGCAAGGAAGTAATTCA
ACAAGCACTTGAACAGCACGAGAACGGAGATGTAGTTGAAGGCCCATTCCAATCCTCCTTTTTGTGAAATTTGTAGCAAC
AACAGAGCTCAGTAGAGCAGCGAATGCAGTGACGTCACACCAACTGCACTGCTCTCCGCCCTGACATAACAGGGTGTGCA
TCCTGTCACCGGGTGGCAGTAGTGCCTCTGCACCCTAGACCCTAGTTCCTCTCCGGCTGCGGTTGAGGCGGGGTCGCATG
GCAAGCCGCCTGTTGCACGCCCTGCGTAGCCGACTAGCCCGCCACTTGGTTCGCTTTGTCCTCGACAACGCCGTTGTCGT
GTGGTTCGCTTGGTCCATGGCGACGCTGTCCTCGAGGAACTGGCCCAAGAAGAGAGACTAATCATGTTTTCTTTTTGTTT
TCTATCCAAACAAAGAATTGTATACACTCACCTTAACAGAAAAACTAACTAAAACTGGTTTTCCTAAAAATCCTCTGAAA
ACTGGTTTTCTAAAAAC--------TCACGTCTAATTCTTGGCATCCAAACAACCA------------------------
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>chr3B_688
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---------------------------------------------------------------------------GGACG
CAGGTTTGGACTTGCATTTTTTTTTTGCGGTAATGTTAACTGGTTGATGTTCACTTGGATGAGATCCAAATCCAAAGGAT
GACAGTTGTTGACCAAAATTGCACAAA-AATAAAGAACTGCCATGTTTTTTTCTGAAAACTGCCATCACCCCTTAAATAT
GCCATCCGCATTCGCAAATGCCATGCGTGGCAGCGAACGTTCGCTCGCTGGGAATCAGTATCTTTTTTTTGCAAGAGGAG
CTACAATTAATAAACTGAACTGAACTGAACCAGAACGCCTATATAAAGAGAGGAGAGCACCACCCGTTT-----------
----------------------ACTCACACACACACCACAACCAGTACTAGATCCACAAGCCAGCT----GAAAGGAAGA
AGATGATGAGCAACAAGGCCCTCACACTCGGCGCGGTCGTCGTCCTCGCCTTCGCCATGGCGGGCGCGCACGCCGAGCAG
TGCGGCCACGCGGCCGACGGCATGGAGTGCCCCAACAACCTCTGCTGCAGCGCGTGGGGGTACTGCGGCATGGACGCCAA
CTACTGCGGCGATGGCTGCCAGAGCGGCGCCTGCTACGAGCCCAAACGCTGCGGCGCCCAGGCCGGGGCGAACGCGGTGA
CGTGCCCCAACAACCACTGCTGCAGCGGCGACGGGTTCTGCGGCTACGGCCAGGAGTACTGCGGCGCCGGCTGCCAGAAC
GGGCCCTGCCGCGCCAACATCAAGTGCAGC---------GCCGACAAGCCGTGCCTGAGCAACTTCTGCTGCAGCCAGTA
CGGATACTGCGGGCTCGGCGTCGAGTTCTGCGGCCAGGGCTGCCAGAGCGGCGCCTGCCATGACGCCGTTGGTGCCGCCG
CCCTGCCGCTCAGCTCCATAGTGCAGGGGTGATCTTGAACTGCATATGGCTACTAGTATTGCGACGGGATCAGGTGAGGG
GATGAGTTGTGCCAATGTCGATCGTTGCCACGTCTTCTTCACCGGCTAGTTTGCGTTTTCTTCGTCTTTACAATCGTTCC
CATCATGCATGCACGCATGCATGATTAGCGTTTGGGAACCAAAAATAATGCGCGTGCGGCATCATGCATGCATGCGTCGT
CCTTGTAATCTTTGTAATCCAATAAATCTGAATCTCGTCGCAATTGACGGAGTGTGTACT---GTGTTATCTTTAGGCTA
ATCTCTGTTCGAGAAGCCGAGGTTAACCAAAGCACCTCACAACCTCAAAGTCT---------------------------
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>chr1A_1025
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---------------------CACAGACAC-AAGCACACAACCAGCCCTAGATCGACAAGAGAGGAAGTAAAAAGGAAGA
AGATGATGAGCACCAGGGCCCTCGCTCTCGGCGTGTCTGTCGTCCTCGCCTTCACGGTG---ACCACGCACGCCCAGAGG
TGCGGCGAGCAGGGCAGCGGCATGGAGTGCCCCAACAACCTCTGCTGCAGCCAGTACGGCTACTGCGGCATGGGCGGCGA
CTACTGCGGCAACGGCTGCCAGAACGGCGCCTGCTACACCAGCAAGCGCTGCGGCAGCCAGGCCGGCGGCGC------AG
TGTGCCCCAACAACCACTGCTGCAGCCAGTACGGGCACTGCGGGTTCGGCTCCGAGTACTGTGGCGCCGGCTGCCAGGGC
GGCCCCTGCCACGCCGACATCAAGTGCGGCAGCCAGGCCGGCGGCAAGCTATGCCCGAACAACCTCTGCTGCAGCCAGTG
GGGTTACTGTGGCCTCGGCTCCGAGTTCTGCGGCGTCGGCTGCCAGAACGGCGCTTGC----------------------
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>chr1B_1027
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-----------------------CACACACAAAGCACACAACCAGCCCTAGATCGACAAGTCAAGAAG--AAAAGGAAGA
AGATGATGAACACCAGGGCTCTCGCTCTCGGCGCGGCCGTCGTCCTCGCCTTCGCGGCGGCGACCGCGCACGCCCAGAGG
TGCGGCGAGCAGGGCAGCGGCTTGGAGTGCCCCAACAACCTCTGCTGCAGCCAGTACGGCTACTGCGGCATGGGCGGCGA
CTACTGCGGCAACGGCTGCCAGAACGGCGCCTGCTACACCAGCAAACGCTGCGGCGCCCAGGCCGCCGGCGC------AG
TGTGCCCCAACAACCACTGCTGCAGCCAGTACGGGCACTGCGGGTTCGGCTCCGAGTACTGTGGTGCCGGCTGCCAGGGT
GGCCCCTGCCGCGCCGACATCAAGTGCGGCAGCCAGGCCGGCGGCAAGCTCTGCCCCAACAATCTCTGCTGCAGCCAGTG
GGGTTTCTGCGGCCTCGGCTCCGAGTTCTGCGGCGTCGGCTGCCAGAGCGGTGCTTGC----------------------
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>chr1A_1027
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-----------------------CACACAC-ACACACACAAGTGCACAACCAGCACCAAGAAAAC----AAAAAGCATGA
AGATGATGAGCACCAGGGCCCTCGCGCTCGGCGCGGCTGCCGTCCTCGCCTTCGCCGCGGCGACCGCTCAGGCCCAGAGG
TGCGGCGAGCAAGGCAGCAACATGGAGTGCCCCAACAACCTCTGCTGCAGCCAGTACGGCTACTGCGGGATGGGCGGCGA
CTACTGCGGCAAGGGCTGCCAGAACGGCGCCTGCTGGACCAGCAAGCGCTGCGGCAGCCAGGCCGGCGGCGC------GA
CGTGCACCAACAACCAGTGCTGCAGCCAGTACGGGTACTGCGGCTTCGGCGCCGAGTACTGCGGCGCCGGCTGCCAGGGC
GGCCCCTGCCGCGCCGACATCAAGTGCGGCAGCCAGGCCGGCGGCAAGCTGTGCCCGAACAACCTCTGCTGCAGCCAGTG
GGGATTCTGCGGCCTCGGTTCCGAGTTCTGCGGCGGCGGCTGCCAGAGCGGTGCTTGC----------------------
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>chr3A_1031
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---------------------------CAC-ACACACACAACCAGTACCAGATCCACAAGCCAGC----AGAAAGGAAGA
AGATGATGAGCACCAAGGCCCTCACCCTCGGCGCGGTCGTCGTCCTCGCCATCGCCATGGCGGGCGCGCACGCCGAGCAG
TGCGGCCACGCGGCCGACGGCATGGAGTGCCCAAACAACCTCTGCTGCAGCGCGTGGGGGTACTGCGGCATGGACGCCAA
CTACTGCGGCGACGGCTGCCAGAGCGGCGCCTGCTACGAGCCCAAACGCTGCGGCGCCCAGGCCGAGGGGAACGCGGTGA
CGTGCCCCAACAACCACTGCTGCAGCGGCAACGGGTACTGCGGCTACGGCCAGGAGTACTGCGGCGACGGCTGCCAGAAC
GGGCCATGCCGCGCCAACATCAAGTGCAGC---------GCCGACAAGCCGTGCCTGAGCAACTTCTGCTGCAGCAAGTA
CGGATACTGCGGGCTCGGCGTCGAGTTCTGCGGCCAGGGCTGCCAGAGCGGCGCCTGCCATGACGCCGTTGGCGCCGCCG
CCCTGCCGCTCAGCTCCATAGTGCAGGGGTGATCTTGAACTGCGCATGGCTACAAGTATTGCGACGGGATCAGGTGAGGA
GATGAGTTGTGGCAATGTCGATCGTTGCCACGTCTTCTTCACCGGCTAGTTTGCGTTTTCCTCGTCTTTACAATCGTTCC
CATCATGCATGCACGCATGCATGATTAGCGTTCGGGAACCACAAATAATGCGTGTGGCGC----------CATGCGCCGT
CTTTGTAACCTTTGTAATCCAATAAATCTGAATCTCGTTGCAATTAACGGAGTGCGTACTATAGT-----------GCTA
ATCTCTGTTCGAGAGGCGGAGGTTAACCAA--------------------------------------------------
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>chr3A_1888
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------------------------AACCAAAGCACCTCACAACCTCAAAGTCTCGGCCATTTTTTTAGCCTCAGCCAACG
AAGCATGAGCTCAATCACTAAGTGGTTTTCCTTGAGGTGTCCCGGAGCATAAATCCACACTTTTTAGGGCCATTGATAGG
GGCAAGGATGTCCCAATCTTTCAATGAGAAAGATTTTGTCGATTTGGATGGAGAACAACTTTGACGCCAATCTCATGAAT
GTTACCGTCAATGCCGGTGCCAGATGCGTGGTTAGCCTGACCAAGAAGGTCTACCTGGAAGCAATAAAAAAACGATCAAG
AATATGGTAGAAGCAATCTGGATATTGCGAGTATAGATGAAATGTTGATTATCTTAAACGGAGTACACAAAGGTGCAACA
ACGACTAACTTTTTGGCTAAATAAAATCCAAAGCAAACACTATAAGGTTGATCTATCTACATAGGACTAAGAGGTGGCGG
CCAATGGGGTTGACGCACACCCAATGACAGCAAACAACCCTAAATCATACAAGGCTCATAGTGTTTGATTGTTATTTGTG
TGCATATTAAATTCCCTCTTAAGTAATGGAATTTAGGCACTTCTGTCATATTTTCAGAAAAGAAGGAAAATATAACTGCT
ATCTCGAGCAAATGCACCGTAGTTAGGCGTTTTTATATTGTTAG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>SNPs
--------------------------------------------------------------------------------
--S------------------------------------S----------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
-----------S---------------------------------------------S----------------------
-----S----------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S------------------------------------------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
----------------------------------------S--------------S-------------------S----
----------------------------------------------------S-------S-------------------
--------------------------------------------------------------------------------
---------------------------------S--------------------------S-----S--S-S------S-
----S--S------------S----------S------------------------SS-----------S----------
S------------SS------------S--------S--------------------S---S--------S--S------
---S----S---S-----------------------------------------S-------------------------
----------------------------S----S---------S---------------S-----------S--------
-------------S--S--S-----------------------S-S---------S-----S---S--------------
----------------------------S----SS----------S---------------S-S--------S--SSSS-
-----S------S----S---------------S----SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CACCAACTGCACTGCTCTCT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_2138
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GCTTTGACGCCAGTCTCATG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
