>input_sequence_67782
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---------------------------------------------------------------ATGGAGTCATCTACAGC
TGATGCCGGTGACAAGCATCTGGGGAGCTACCTGACATTGGGTTTGACAGTATCGCAGTCAAAGAAAGGGGATACTAAGT
TTCCAAAGGTCCTGTCGCTTCTTGCCACATATCTGGGCAGATCAGTTCAGAAGAATGAAGAATTACTAGGTTCTAATGGA
ATAAAGGAGTCGACCACCATCTTTCATGGCCAGAAGGTGCCAGATCTCAGTATACAGCTCTATGCAGAGCGCATT-TTCA
AATATGCCGAGTGCAGTCCATCCTGCTTTGTGTTGGCACTTGTCTACATGGAGAGATATCTACAGCAGC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAAATGTGTACATGACGCCCTTCAGTGTTCATCGCTTGCTGATTACAAGTG
TGGTGGTTGCTGCCAAATTCACAGATGATGCGTA------AGTGTAC----CCAATGCAACTGCAATTCAGCTGTATTTT
G-----TG-----TATATCACAAACATGTACAGGTTTCCCAGAAACTTTCTCAAAATCTCAA-------TGCATCTCCTG
CAGGTTTTTCAACAATGCATTCTATGC----TAGGGTGGGAGGAATCAGCACAATTGAGATGAATCGTCTCGAGCTGGAT
TTGTTGTTTAATCTGGACTTCAGGCTTAAAGTGAACCTAGAGACA--TTCGGGAGCTACTGCTTGCAGCTGGAGAAACAT
GCACCTGTGTCACCAGAGAGACTGCCGGTTCAGGTTCATTGTGTCAGTGTCAAAGGATCTAAAGATTTGAGCTATAGCAG
CAGTGCTAGCGCCGACGAGTTTTGCCAGAGCAAGCTTGTTCGCCAAAGCTACAGCAGTCAGGCTCTCCAAGGATGCAGCT
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr1B_1_TraesCS1B01G260000
GAGACGGAGGAGGGGCGGCCGTCGGGAGGAGCGTGAGGCCGCCAGCTCCAGCTCGAGCTCAACCCTGAAGAAGAAGAAGA
AGAAGGCCTCCTTCCCTTCCCCCGAGCTCAAGCCTAGAGCAAAGCTGTAAGAATCTCTATCTACCAAGCCTCTCCCTCCC
GTGCGGTTTGTTGGCTAGTACTCCTAGATCTCAAGTTGCACAGC--ATAATGCTATCCTACCTACTACCTGCGC-AGCTA
GGTGCGGCATTTGGGTCTG---GATGGGATTCCCACTCAATCTGCCGTGCCCTTCTTGCTCTAT-------TCTCTTTCG
AGCGAGCTAGGGTTGG--TCCCGAAGGAGCGCAGGAGCGTCGGGGAAGCACAAATCTGCTTGCCCGCGTGCTCTGATGGG
GCGGTGTGCCGGCTACTTTGGG--------GTGGATTTGGGCGCAGCTGCGTCAGGAAGGAGTGTTTCTTGCCACCTCTT
-TATGGTTGTTTATCCCCTCCGTTTGGTTGAGGGTTTAGGATTTCCCTTTATAAATGAGGCGAAATATACCAAAAATACT
TGTTTCAAAAATAATAATACCAAAAATAGAAGACGAATAACCCTCTGGATGCCCCAAAAGGGAGCAACACCCAGCTA-CT
TTGTGTCT----TGCGT-----ATCTTCTGA-------------------ATGGGAAAAGGGAAAGGATTAGATTCATGC
TGATGCTTGT----------------------------------------------------------TAATTTCTTGTG
TGTGT------TTTGGTGCATTCCTTGCCAAGAC--TGAAACTGTATTC-CGATCAGTATGTTGTGCAATGAGAGAGCTA
AGCATGGTGGTAGTACACCACTGCCTC----ACGG------AATCTTGGTTCGGCTCCGCATCTTGTACAAGAACAGACG
CGGCTGCGAGTTTTGTGCAGCAACTCTAAGCCTG-GGAAAAATACCTCCAGCCTTCTTGCATTGAACTAGGATCAACTTT
C----------------------------------------------TTGTGCCAAACCTTCAAAGTATCTACTGTCTGC
TCTACCCATT--TTTTTTACCAACAACTGTTCTGT--C--TTGTACAGTACTTATGTCTGCACATGGAGTCATCTACAGC
TGATGCCGGTGACAAGCATCTGGGGAGCTACCTGACATTGGGTTTGACAGTATCGCAGTCAAAGAAAGGGGATACTAAGT
TTCCAAAGGTCCTGTCGCTTCTTGCCACATATCTGGGCAGATCAGTTCAGAAGAATGAAGAATTACTAGGTTCTAATGGA
ATAAAGGAGTCGACCACCATCTTTCATGGCCAGAAGGTGCCAGATCTCAGTATACAGCTCTATGCAGAGCGCATT-TTCA
AATATGCCGAGTGCAGTCCATCCTGCTTTGTGTTGGCACTTGTCTACATGGAGAGATATCTACAGCAGC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAAATGTGTACATGACGCCCTTCAGTGTTCATCGCTTGCTGATTACAAGTG
TGGTGGTTGCTGCCAAATTCACAGATGATGCGTA------AGTGTAC----CCAATGCAACTGCAATTCAGCTGTATTTT
G-----TG-----TATATCACAAACATGTACAGGTTTCCCAGAAACTTTCTCAAAATCTCAA-------TGCATCTCCTG
CAGGTTTTTCAACAATGCATTCTATGC----TAGGGTGGGAGGAATCAGCACAATTGAGATGAATCGTCTCGAGCTGGAT
TTGTTGTTTAATCTGGACTTCAGGCTTAAAGTGAACCTAGAGACA--TTCGGGAGCTACTGCTTGCAGCTGGAGAAACAT
GCACCTGTGTCACCAGAGAGACTGCCGGTTCAGGTTCATTGTGTCAGTGTCAAAGGATCTAAAGATTTGAGCTATAGCAG
CAGTGCTAGCGCCGACGAGTTTTGCCAGAGCAAGCTTGTTCGCCAAAGCTACAGCAGTCAGGCTCTCCAAGGATGCAGCT
GACCAATCTATTTATGGCCTAAAGTTTTGCAAAGCACGTGACCTGATTACTGATAATTCTTTTAGATCTGACATTTGTGG
ATTCAGATTGCATTAAGTTGTTCTGGGGGTGTTTGATTAGTAGGGCTTTGATTCTACTCCCTCTGTAAAGTAGATGATCT
AAACGATCTTATATTTCTTTACAGAGGGAGTATTTTACTTCTGTAACACTGTAATTCTTGCAAACCACTTTGTTTAAAAT
GTTCACAATCGAGTTGGGAAACAACAGGTCTGAACATTGTTCATGTCCTGTGATATCCAATGCCGC--------------
------------------------GGTTTAACCGGTTCTGTTGCCAAGTAGCCTGTCGGCAAAGATGAATCAAGGTTTTC
CAAGATCTGTGAATGGACTG--TTCATTCTCCATGCATCTTCTGATTCTGTTTGAGTCGCATAACAGGATCTGTGATGAT
TCCCACCGGCATTGTTGCAACAAGGAATTTATAAAACGAATTACTTTCCTGAACACAAGACCATGACTACGAGAGACATT
GCCAAAGCATGAAAACAGAGCCAACGCCTCAGATGCACATTCGACTCAGAATATTTGAGTGGTGCAGCATATAATTCGAA
ACAGATGCTATGAAAAGGCTGGACCCACCTGCAGCTTCAACACCCCC----ACGCTACTCTAGTTTTGTTATCTGT----
AAGTAACATGAGCAAATTAGTTTTATGAGGGGA-AGAGACCATCCAGACTGGTATTTTTCTGTCTGATACTC--------
AGCTTTAAATTTCTGTACGTGTTCTCTGGGCAGTCCTCAAACGTTATCCCTTAATTAGACTAGTAGAGTAGATATCTGGG
CAGTCGTAAAGAAATCCACAATTCTAGTCATGAGCGGATTGTAAAATTAACTACTCCCTCCGATCCATATTAATCGAGAG
AGGGGATTGTACTACAATTTAGGTGCAAGGAAAGGAGAATTCATATTCCTATG-TTTTTCCTCCACTTGTCCTATGAATC
AAAGAACAACTTGTCACCAG
>chr1D_1
GAGACGGAGGAGGGGCGGCCGTGGGGAGGAGCGTGAGGCCGCGAGCTCCAGCTCCAGCTCAACCCTGAAGAAGAAGGCCT
CTC----------CCCTTCCCCCGAGCTCAAGCCCAGAGCAAAGCTGTAAGGATCTCTATCTACCAAGCCTCTCCCTCCC
GTGCGGGTTGTTAGCTGG------TAGATCTCAAGTTGCACAACATATAATGCTATCCTACCTACCTTTGTAAGTAGCTA
GGTGCGGCATTTGGGTCTAG-AGATGGGATTCCGGCCCAATCTGCCGCGCTCTTCTTGCTCTGATCTCTCATCTCTTTCG
AGCGAGCTAGGGTTGTGATCCCGAAGGAGCGCAGGAGGGTCGGGGAAGCAGAAATCTGCTTGCCCGCGTGGTCTGATGGG
GTCGTGTGCCGGGTACTTCGGA--------ATGGATTTGGGGGCAGCTGCATCAGGAAGGAGTGTTTCTTGCCACCTCTT
-CATGGTTGTTTA-CCCCTCCTTTTGGTTGAGGGTTTAGGATTTCCCTTTACAAATGAGGCGAAATATTACCT-------
-----------------TACCAAAAATAGAAGAGGAATAACCCTGTGGGTGGCCCAAAAGGGAGCAACACCCAGCTCCCT
ACTTTGTACTACTGCTT-----ATCTTCTGAAGCAGCTTGATGGTCGCAGAAAAGGAAAAGGAAATAAGCAGATCCATGT
TGATGTCTGTGGGTAGTACTCTACAACTTTGTACTAAATCAGCGACGAGTAATATGGAGCGGAAGGAGTATATTCTTGCG
TGTATTTGACACACTCCTTAGAGAATGCCAAGACTTGGAAACTGTATTTTCGATTGCTATGTTGTGCAATGAGAGGGGTC
AATTCAGAGCAACGTGTGGAGGTAGCTTCTAAATTTAGTATATTCTTGGTTTGGCTCCGCACCTTA--CGAGAATAGACG
CAGCTATGGGTTTTGGTGCAATGCTATAATCCTG-GGGAAATTAGCTTCAGCCTTCCTCTTCATCGTCTGATGTCCATCT
TTAAATTTCTGCGTGGTTGACTGGTTGTACATAAACTGTCATCAACTTTTTTCCACACCTTCAGCTTGTCTACTGTTTTC
TCTACAGAAAATCTTGTTGATTAATAACTTGCTTCACC--TTTTACAGCACTTATGTCTGCCTATGGAGTCATCTACAAC
TGATGCCGGTGATAAGCATTTGGAGAGCTACCTGACATTGGGTTTGACAGTATCGCAGTCAAAGAAAGGGAATACCAAGT
TTCCAAAGGTCCTGTCGCTTCTTGCCACATATCTGGGCAGATCAGTTCAGAAGAATGAAGAATTACTAGGTTCAAATGGA
ATAAAGGAGGCAGCCACCATCTTTCATGGCCAGAAGGTGCCAGATCTCAGTATACAGCTCTATGCAGAACGCATC-TTCA
AGTATGCTGAGTGCAGTCCATCCTGCTTTGTGTTGGCACTTGTCTACATGGAGAGATATCTACAGCAGC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAAATGTGTACATGACGCCCTTCAGCGTTCATCGCTTGCTGATTACAAGTG
TGGTGGTTGCTGCCAAATTCACAGATGACGCGTA------AG--TAC----CCACTGCACGTGGAATTCAGCTGTATTTT
G-----TG-----TATATCGCAAACATGTACAGGTTTCCCAGTAACTTTCT--------CAA-------TGCATGTCGTG
CAGGTTTTTCAACAATGCATTCTACGC----TAGAGTGGGAGGAATCCGCACAATCGAGATGAATCGGCTTGAACTGGAT
TTGTTATTTAATCTGGACTTCAGGCTGAAAGTGAACCTAGAGACG--TTTGGGAGCTACTGCTTGCAACTGGAGAAACAT
GCACCGGTGTCACCAGAGAGACTGCCGGTTCAGGTTCATC------GTGTCAATGGATCTAAAGATTTGAGCTATAGCAA
CAGC---AGCGCCGACGAGTTTTGCCAGAGCAAGCTTGT------AAGCTACAGCAGCCAGGCTCTCCAAGGATGCAGCT
GACCAATCTATTTATGGCCTAAAGTTTTGCAAAGCATGTGACCTGATTACTGATAATTCTTTTAGATCTGACATTTGTGC
ATTCAGATTGCATTAAGTTGTTCTGAGGGTGTTTGATTAGTAGGGATTCGATTCTG------------------------
--------------------------------CTTTACTTGTGTAACACTGTAATTCTTGCAAACCACTTTGTTTAAAAT
GTTCACAATCTAGTTGGGAAACACCAGGTCTGAATATTATTCA-GTCCTGTGAT-TCCAATGCCGC--------------
------------------------GGTTTTACCGGATCTGCTGCCAAGTAACCTGTCGGC-AAGATGAATCTGGCTTTTC
CAAGATCTGTGAATGGCCTGTGTTCGTTCTCTGTGCATCTTCTGATTCAG-TTGAGTCGCATAACAGGATGTGTGATGAT
TTTCACCGGCATTGTTGCGACGAGGAATTTATAAAACGAATTACTTTCCTGAACACGAGACTATAACCACGAGGGACATC
GCCGAAGCATGAAAACAGAACCAACACCTCGGATGCAAATTCAAGTCAGAATATTTGAGTGATGTAGCATATCATTCGAA
ACAGATGCTATGAAATGACTGGAACCACCAGCAGCTTCAACACCCCC----ACGCTACTCTAGTTTTGTTATCTGT----
AAGTAACATAAGC-AATTAGTTTTATGAGGGGG-AGAAACCATCCATACTGGTGTTTTTCTG--------TC--------
AGCTTTAAATTTCTTTATGTGTTATCTGGGCAGTCCTCAAACGTTATCCCTTAATTAGACTACCAGAGTTGATATCTGGG
CAGTCGCAAAGAAAGCCACAATTCTAGTCACGAGGGGATTGTAAAATTAACTACTCCCTCCGATCCATATTAATCGAGAG
GGGAT--TGTAC----------GTGCAAGGAAAGGAAAATTCATATTCCTATG-CTTCTCCTCCACTTTTCCTATGGATC
AAAGAACAACTTGTCACCAG
>chr1A_73
------------------------------------------------------------------------GAAGAAGA
AGAAGGCCTCCTGCCCTTCCCTGGAGCTCAAGCCTAGAGCAAAGCTGTAAGTCTCTCCCTCC---------CTCCCTCCC
GTGCGGGTTGTTGGCTGGTACTCCTAGATCTCAAGTTGCACAGC--ATAATGCTATCCTACCTACCTGCGTACTATCTCC
T-TGCGGCATTTGGGTCTACTAGATGGGATTCCCACCCAATCTGCTGTGCCTTTCTTGTG-------CTCATCTCTTTCG
AGCGAGCTAGGGTTGG--TCCCGAAGGAGCGCAGGAGGGTCGGGGAGGCGGAAATCTGCATGCCCGCGTGGTCCGATGGG
GCGGTGTGCCGGCTACTTTGGGCGGGGGCAGTGGATTTGGGTGCGGCTGCATCAGGAAGGAGTGTTTCTTGCCACCTCTT
TTATGGTTGTTTATCCCCTCCTTTTGGTTGAGGGTTTAGGATTTCCCTTTATAAATCAGGCGAAATAC------------
-----------------TACCAGAAATAGAAGAGGAATAACCCTCTGGGTGGCCCAAAAGGGAGCAACACCCAGCTA-CT
ACTTTGTTTGTTGCCTATCTTCATCTTCTGA-------------------AAGGGAAACGGGAATGAACTAGATTCATGC
TGATGCTTGT----------------------------------------------------------TAAATTCTTGTG
TGTGTGTGTGTTTTGGTGCATTCCTTGCCAAGAC--GGAAACTGTATTC-CGATTAGTATGCTGCGCGATGAGCGAGCTA
AATTTAAAGTTCAGTGTGGAGGTACCAAACAACGG------AATCGTGGCTCGGCTCCGCATTTTATACGCAGATCGACG
CAGCTATGAGTTT--GTGCAATGCTGTTACAGCCTGGGAAAATACCTCCAG---------ATTGAACTAGGATCAACTTT
C----------------------------------------------TTTTGCCCAACCTTCAAAGTATCTACTATCTGC
TGTGCCCATTTATTTTTCACTAACAACTGCTTTAT--CTTTTATACAGTACTTATGTCTGCCCATGGAGTCATCTAAAAT
TGATGCCAGTGACAAGCATCTGGAGAGCTACCTGACATTGGGTTTGACAGTATCACAGTCAAAGAAAGGAAGTACCAAGT
TTCCTAAGGTCCTGTCGCTTCTTGCCACATATCTGGGCCGATCAGTTCAGAAGAATGAAGAATTACTGGGTTCTAATGGA
ATAAAGGAGTCGACCACTATTTTTCATGGCCAGAAGGTGCCAGATCTCAGTATACAGCTCTATGCAGAACGCATT-TTCA
AATATGCCGAGTGCAGTCCATCTTGCTTTGTGTTGGCACTTGTCTACATGGAGAGATATCTACAGCAGC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAAATGTGTACATGACGCTCTTCAGCGTTCATCGCTTGCTAATTACAAGTG
TGGTGGTTGCTGCCAAATTCACAGATGATGCGTA------AGTGTAC----CCAATGCAACTGCAATTCAGCTGTATTTC
TTTCTTTG-----TATATCACAAACATGCACAGGTTTCCCAGTAACTTTCT--------CAA-------TGCATGTCGTG
CAGGTTTTTCAACAATGCATTCTATGC----CAGAGTGGGAGGAATCAGCACAATCGAGATGAATCGGCTTGAACTGGAT
TTGTTGTTTAATCTGGACTTCAGGCTGAAAGTGAACCTAGGGACA--TTCGGGAGCTACTGCTTGCAGCTGGAGAAACAT
GCACCGGTGTCACCAGAGAGACTGCCTGTTCAGGTTCATTGTGTCAGTGTCAAAGGATCTAAAGATTTGGGCTATAGCAG
CAGTGGTAGCGCCGACGAATTTTGCCAGAGCAAGCTTGTTCGCCAAAGCTACAGCAGTCAGGCTCTCCAAGGATGCAGCT
GACCAATCTATTTATGGCCTAAAGTTTTGCAAAGCATGTGACCTGATTACTGATAATTCTTTTAGATCTGACATTTGA--
---------GCATTAAGTTGTTCTGGGGGTGTTTGATTAGTAGGGATTCAATTATG------------------------
--------------------------------TTTTACTTCTGTAACACTGTAATTCTTGCAACCCACTTTGTTTAAAAT
GTTCACAATCTAGTTGGGAAACAACCGGCCTGAACATTACTCA-GTCCTGTGATATCCAATGCCGTGGTTTAACTGGATC
TATTATTTATTTATTTTAAGAAAAGGTTTAACCTGATCTGTTGCCAAGTAACCTGTTGGC-AAGATGAATCTGGCTTTTC
CAAGATCTGCGAATGGCCTGCTTC----CTCTGTGCTTCTTATGATTCTGTTTCAGTCGCATAACAGGATCTGTGATGAT
TTACACTGGCATTGTTGCAACAAGGAATTTATAAAACGAATTACTTTCCTGAACACGAGACTATGACTATGAGTGACATC
GCCAAAGCATGAAAACAGAGC---------AGATGCACATTCGAGTCAGAATATTTGAGTGATGTAGCGTA---------
--------------------------ACCTGCAGCGTCAACACCCCTACGGACGCTACTCTAGTTTTGTTATCTGTATAT
AAGTAACATAAGC-AATTAGTTTTATGAGGGGGGAGAAACCATCCATACTGGTGTTTCTCTG--------TCTGATATTC
AGCTTTAAATTTCTGCATGTGTTATCTGGGCAGTCCTCAAACGTTATCCCTTAATTAGACTACCAGAGTTGATATCTGGG
CAGTCGTAAAGAAAGCCACAATTCTAGTCACAAGGGGATTGTAAAATTA--TACTCCCTCCAATCCATATTAATCGAGAG
GGGAC--TGTACTACAATTTCAGTGCAAGGAAAGGAAAATTCATATTCCTACGATTTTTCCTCCACTTCTCCTATGAATC
AAAGAAGAACTTGTCACCAG
>chr1A_1007
--------------------------------------------------------------------------------
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---------------------------------------------------------------------TCATCTACAAC
TAATGCTGGTGATGAGCATTTGGAGAGCTACCGGACATTGGGTTTGACAGTATCGCGGTCAAAGAAAGGGGATACGAAGT
TTCCAAAGGTCTTGTCGCTTCTTGCCACATATCTGGGCAGATCAGTTCAGAAGAGTGAAGAATTACTAGGTTCTGATGGA
ATAAAGGAGTCGTCCACTATCTTTCATGGCCAGAGGGTGCCAGATCCCAGTATACAGCTCTATGCAGAACGCATTTTTCA
AGTATGCTGAGTGCAGTCCATCCTGCTTTGTGTTGGCACTTGTCTACATGGTGAGACATCTACATCAGC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAAATGTGTACATGACGCCCTTCAGTGTTCATCGCTTACTAATTACAAGTG
TGGTGGTTGATGCCAAATTCACAGATGATGCGTAGTGTGTAGTGTAC----CCAATGCAGCCGCAATTCCGTTGTATTT-
---CTTTGCATATCATATCACAAACATGCACAGGTTTCCCAGTAACTTTCT--------CAAATCTCAATGCATCTCCTG
CAGGTTTTTCAACAACGCATTATATGC----TAGGGTGGGAGGAATCAACACAATCGAGATGAATCGTCTCGAGCTGGAT
TTGTTGTTTAATCTGGACTTCGGGTTGAAAGTGAACCTAGAGACT--TTTGGGAGCTACTACTTGCAACTGGAGAAACAT
GCACCGGTGTCACCAGAGAGACTGCCGGTT--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>chr3A_1007
--------------------------------------------------------------------------------
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---------------------------------------------------------------------TCATCTACAAT
TGATGCCGGTGATAAGCATTTGGAGAGCTACTGGACATTGGGTTTAACAGTATCACAGTCAAAGAAAGGGGATACCAAGT
TTCCAAATGTCCTGTCGCTTCTTGCCACATATCTGAGCAGATCAGTTCAGAAGAATGAAGAATTACTAGGTTCTGATGGA
ATGAAGGAGTCGTCCACTATCTTTCATGGCCAGAGGGTGACAGATCTCAGTATACAGCTCTATGCAGAACGCATT-TTCA
AGTATGCTGAGTGCAGTCACTAGTAGAAAACGGGCCTATTGTCCCGGTTCGTAAGGATCTTTTGTCCTGGTTCCTGAACC
GGGACTAAAGGGTCGTTACTAATGCCCTGACCCTTTAGTCCCGGTTCTAACCAGAACCGGGACAGATGGGTCTCCACGTG
GCCTGCGCGCTGAGCCCAGGCAGGAGGGCCTTTGGTCCCGGTTGGTGGCACCAACCGGGACCAATAGGCATCCACGCGTC
AGCATTTCTGTGGCTGGGGTTTTTATTTTTTTTGAAAGCGGGGGGGTTTGGGGGTTAATTTAGGTATTTCATATATTGTG
TCACAAACATGACGCCCTTCAGTGTACGTCAAATGTGTACATGACGCCCTTCAGTGTTCATCGCTTGCTAATTACAAGTG
TGGCGGTTGCTGCCAAATTCACAGATGATGCGTA------AGTGTAC----TCAATGCAGCCGCAATTCAGCTGTATTT-
---CTTTG-----CATATCACAAACATGCACTGGTTTCCCACTAACTTTCT--------CAAATCTCAATGCATCTCCTG
CAGGTTTTTCAACAATACATTCTATGC----TAGGGTGGGAGGAATCAACACAATCGAGATGAATCGTCTCGAGCTGCAT
TTGTTGTTTAATCTGGACTTCAGGCTGAAAGTGAACCTAGAGACTTTTTTGGGAGCTACTGCTTGCAACTGGAGAAACAT
GCACCGGTGTCACCAGAGAGACTGTCGGTTCAGGTTCATTGTGTCA------AATGATCTAAAGATTTGAGCTATAGC--
--------------------------------------------------------------------------------
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--------------------
>chr1D_1224
TCAGGT--------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------ATACAGCTCTATGCAGAACGCATT-TTCA
AGTACGCCGAGTGCGGGCCATCTTGCTTTGTGTTGGCACTTGTCTACATGGAGAGATAGCTA--GCAAG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAAATGTGCACATGATGCTCTTTAGTGTTCATCGCTTGCTAATTACAGGTG
TGGTG-TTGCTGCCAAATTCATTGATGATGCGTA------AGTACCCACTGCCACAGCAACTGCAAT-----TGTATTAT
C-----TT-----TATATCACAAACATGCACAGGTTTCCCAGTAATA------------------------CATGTGTTG
CAGGTTTTTCAACAGTGCATTCTAACATGCATAGGGTGGGAGGAATCAGTGCATGCGAGATGAATCGGCCTGAGTTGGAT
TTGCTGTTTAATCTGGACTTCAGGCTGAAAGTGAACCTGGAGTCA--TTTGGGAGCTGCTGCTTGCAGCTGGAGAAACAT
GCAGCGCGTTCACC--AGAGACTGCCGGTTCAGGTTCATTGTGTCA------ATGGATGAAAAGATTTGAGCTATAGC--
----GGTAGCGCCCATGAGTTTTGCTAGAGCAAGCTATGT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>SNPs
----------------------S-------------------S-----------S-------------------------
------------S--------------------------------------S----------------------------
------S---------S------------------------------------------------SSS-SSSSS------
------------------S-----------------S-------------------------SS----------------
-------------------------------------S------------S-------------------S---------
-----------------------------------------S--------S-----------------------------
---------------------S----------------------------------------------SS-SSSSSSSSS
SSSSSSSSSSSSSSSSS----------------S--------------S--S----------------------------
SSS-SSS--------S-----------------------------------S--------------S-S-----------
-----------------------------------------------------------------------S--------
------------------------------------S-----------------S-------------------------
-SSS-S-S-S--SSSSSSS-SSSS-SS--------------------------------------S---S----S-----
-S---SS--------SSSSSSSS--S---S-------S------------------S-SS--------------------
-------------------------------------------------S------------------------------
--------------------S------------S--------S------------------S----------------S-
-----------------------S---------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S--------SSSSSSSS---------------------
-------------------------------------------------------S------------------------
--------------------------S-----------------------------------------------------
-----S--------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
------------------------------------S------------------------------------------S
---------------------------------------------S--S------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------------
----------S---------------------------S----S------------------------------------
-----------------------------------S--------------S---------S----------SS-S-----
----------------S--------S-----SS-----------------------------------------------
-SS-----------------------------------------------------S----S-----------S-----S
-------------------------S------------------S----------------S--S-------S-------
---------------S-S-----S--------------------------------------------------------
---------S---S------------------S----S--------S------S--------SSSSSSSS----------
-----------------S-----S--------------------------------------SS-----S----------
--------------S---------------S---S---------------------------------------------
S--SSSS-------------SS--------------S-------------------------------S-----------
--------------------
>forward_641
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GGAGCAACACCCAGCTACT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>reverse_2906
--------------------------------------------------------------------------------
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-------------------------GCCTCAGATGCACATTCGAC-----------------------------------
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--------------------
