>input_sequence_67744
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------------------------ATGGGATCGTCCTTGGAAGAATTGACAAAAACCAACGTTCTGAGGCCAGCCAAACG
ATTGGTGGGGGAGTACCAAGCTCATCGCCTTCAGGATGAATTTGTTGTGGAAGATCATATAAAGATTCTAGTGAGATCCA
TGGCTAAAGATTTGGAGCGCCACCATGATCAAGGCCACTGCCTTGCAGCCTTCGACCACAGGAACATCCAAATAAACGAT
AAGGGCCGTGGTAAAATAACTGGTGTGGCTTATATTGAGAAGAGTGACGTCGACATTAAGAATAATTATCTGGATCTTCA
CAATGTTGTGCTTAACACTGTCTTTAGGCATTTCAGTTTGAAGGAACAACTACCCAGAGAACGGAGAATGCTCTTATTAC
TGATGAGAAAAGAGTGCATTGGAAAGGAATATTTAATCCGCAACAATGTTGCTCTAATGCCGATTCAATTAAGGGTCCTT
TTCTTCCAGACTGCTTACGAGCATGTGATGTTCTTCTTGCGAGATGATCCAGCGAAGCAGAAGAGGATTTTGGACAGGCT
TCCTTATTTAAATAACTGGACTGATCTGCTAAGAGGCAACACACTCTTGGAAGCATCTCTTGCTCACAAGTCGCATGATA
AAACTACAGCAGAGGGTTTTTTCACTTATTACAGAGATAGCAACAGCCACAGACTGGATCGGTGCCACCTCCTTCGTACC
GTGGGATGCTACACGGCCAAACAATTCGAGATGAATCTCATGGTCGGATACACCCTTTACTTGGCTATGCTGGAAGATTC
GCTGGATAAAGAGGGGGAGTTGGAGAAGCTGGAAGTTCATGTGATGTTCTGA----------------------------
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>chr6A_1_TraesCS6A01G080800
ATACAAGGTCAACATTTTTTCTATTAACTTTTAATAT-------------------------------------------
-----------------------------------------------TTTTTAAA-TTCTTATGAACA-TTTTTCAGACG
CAAGATTAATA-TTGTTTTAATGCACGGTCAACATTTTTTGGATACACATTTAAGATTTTCCAAATGCTTGTTTAACATT
TTTAAAATACTTTTTCAATATTTTTTTAAATGCTTGATTAATA-TATTCATATACATGATCAAAAGATTTCACAAATTTT
TTG-ATACATGGTAAACATTTTTTCTATACACATTCAATAATTTTCAAACACTTGATTGACATTTTTTG--AATACTTTT
TAAACATTTCTTAAATACACGATCAACTTTTTTCACC--TATTGT-ATATCTTTT-CTATACATGGTC------------
--ATCATTTTTTCTATACACATTTAACATTTTTCAAATGCATGATTAACATTTTTCAAAACAG-TATCACAAGTATATTT
TTAAATATA-----CATGTTTAGAA-TTTTGGAA-GTATAAAC---------AAAAGTGAAAAA---TGAAATAAAAATA
AAACAAAAGATCAAACAAATGA-----AAAAAGAGGCAGTGTCCTCGCGCGAGCTG--CCCGTCCATTGAGGCCACTGCC
TTCAGCGAGAGCTGACTCCATCATGCTTGCAGCGAGACA--GTCGCTCCCGCCGTGCTGCGCGTACGGGTTGGCATTGGG
CCGGGGCCTGCGCTTGGGGTTTGGCGTCGCCGGCTTCTATTTTTTAAGTAATAATAAGGTCCTATTTCTCAAAAAAAAAG
TTAATAATAAGGTCCTTGTCTAAAAAAAAGGTACTAATAAGGCCCTTTAAGGCACAAAAAGTTCTACAGCTCTTGAAAAC
TGGTAGTCTTGGTACCAGCAGATCATAACAATCTCTGTTCGTTCAGAACAGCAATTACTTGACTACGTGTTCTCTGTTTT
CATTTGAGTGTTTTGTATCCTACTGTTATAATACTAATACCAAAAACATATATACAGTTACCAGGAAGCACTTAATTCCA
CTACTTATGTACTCTTGTAGGTAAATGGGATCGTCCTTGGAAGAATTGACAAAAACCAACGTTCTGAGGCCAGCCAAACG
ATTGGTGGGGGAGTACCAAGCTCATCGCCTTCAGGATGAATTTGTTGTGGAAGATCATATAAAGATTCTAGTGAGATCCA
TGGCTAAAGATTTGGAGCGCCACCATGATCAAGGCCACTGCCTTGCAGCCTTCGACCACAGGAACATCCAAATAAACGAT
AAGGGCCGTGGTAAAATAACTGGTGTGGCTTATATTGAGAAGAGTGACGTCGACATTAAGAATAATTATCTGGATCTTCA
CAATGTTGTGCTTAACACTGTCTTTAGGCATTTCAGTTTGAAGGAACAACTACCCAGAGAACGGAGAATGCTCTTATTAC
TGATGAGAAAAGAGTGCATTGGAAAGGAATATTTAATCCGCAACAATGTTGCTCTAATGCCGATTCAATTAAGGGTCCTT
TTCTTCCAGACTGCTTACGAGCATGTGATGTTCTTCTTGCGAGATGATCCAGCGAAGCAGAAGAGGATTTTGGACAGGCT
TCCTTATTTAAATAACTGGACTGATCTGCTAAGAGGCAACACACTCTTGGAAGCATCTCTTGCTCACAAGTCGCATGATA
AAACTACAGCAGAGGGTTTTTTCACTTATTACAGAGATAGCAACAGCCACAGACTGGATCGGTGCCACCTCCTTCGTACC
GTGGGATGCTACACGGCCAAACAATTCGAGATGAATCTCATGGTCGGATACACCCTTTACTTGGCTATGCTGGAAGATTC
GCTGGATAAAGAGGGGGAGTTGGAGAAGCTGGAAGTTCATGTGATGTTCTGATTCTGAAGACCGTTGTTCTTATCTGATC
CCTAAGAAGTATTAAAGCTTCCCGGTTCTCCCTTGCTTGAGGGCAACTAGTTTTACTGCTTCTGTGGGATGATTAGGAAG
TTACAGATGAAGGCATAAGCAATCCAGTTATCTCTGAATTGAGGGCTTCTGTAAAATGACTAGCAAGTTACTTTGAACTT
GAAGGCACAGGCCAAATTTGTTGTAATGAAGTAGTAGTAGTAGCTATATATATGCCTTGAACCAACCTTGCTCTATCCCG
AGGTCCTGCTGGTGGCCTGTGTTGGAGCATCTCGGGCTTCTCTTCGAAAGCTTTGGGTTGTCTCTTTTTTTTTTTTTTTG
TTTTTCGGTGTGGACTGTATTTGGCTTTGTAGTTGAACCATGTTTTTTTTCAGTAGAAATCAGAGATGGATGCCTCTGTT
TTATCAAGATAAAAAAATTGACAGCAAGTCGGCCAAACAAAATTTTAATGTATCTATGATGGCACAAGTAATTTCTCTTA
TACTTCGCAGTTTTGAGCAAGTTGCAGAGGAGCTCTGCTGGCTGAAAGAAACATACTTGCAACTTGATATTCTCCTGGCT
GAAGTGCTCTCTCGATTGGGATTCAGGGTTGGAAACTTGAAATGGCTCTTCTCTCCGGCAGCGTGCTGATCCTCCTCGCG
CGACCGCCCGCGGTGCCACAGCTAGGCCACACGCAGGTTGCTAAGATGGTGTTGTCAGTTGTCACTCACTGTCGTGCTAG
CTCTGTGCTGGGAGTGGAGTTCACGGGCTCTGTATTTGTAGCGGGCGCCGCTGTAGGTGGCGTAGTGGCACCAAGGTTGG
CACGGCTACGTGGAGGGACGGCCCTGTAGCATGGGATGGCGGGTCGCCGCGTGCTACATGGGGTTTTAACAACCGGCACC
ATGCAACATTGACAACTTTCAGCGCCTCTGGACTCCACGTTGAGCACCGGTATCATGCATTCGGAGTATTTTCAGCATGA
CCATATCTGAAC
>chr3A_1
ATACATGGTCAACATTCTCTATATGAACATTTAACAT-------------------------------------------
-----------------------------------------------TTTCAAATGTTTTTATCAACG-TTTTTCAAATG
CAAGAGTT-TA-TTTTTTTAATGCATGGTCGACATTTTCTG----CACATTTAATATTTTTCAAATGCTTGATTGATATT
TTCCAAATATTTTTTCAACATTTTTTAAAATGCTTGATTGATA-TTTTCATATACATGATCAAAAGATTTCATT-ATTTT
TTA-GTACATGGTCAACATTTTT-CTATACACATTCAATATTTTTGAAACGCTTGACTAACAA--TTTTCAAATACTTGT
TCTATATATATTAAATACATGATCAATTTTTT-CACGCCCATTGTGATTT-TTTC-GTATACATGGTC------------
--AACATTTTTTCTATACAC-TTTAACATTTTTCAAATGCATGATTAACATTTTTCAAAATAT-CATGAAAATTATATTT
TGTAATATA-----TATGTTTAGAATTTTTGGGA-GTATAAAC---------AAAAT--AAAAA---ATA---AAAAATA
AAACTAAAATTCAAACAAATAAACCCGAAAAAGAGGCAGTAGCCTCGCGCGACCTGGGCCGGTGTATTTAGGCAGCTGCC
TTCAGCGATAGCTGACTC--------------------------------------------------------------
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>chr1B_1
ATACACGGTCAACATTCTTTGAATGAACATATAACAT-------------------------------------------
-----------------------------------------------TTTCAAATGC-TTTATCAATA-TTTTTCAAGTG
CAATATTACTATTTATTTGAATGCATGGTCAACCATTTTTCTATACACATTTAATGTTTTCTAAATGCTTGATTAACATT
TCGT-AATACTTGTTCAACGGTTTTTAAAATGCTTGATTCATACTTTTTACATACAAGATCAAAACATGTCATC-ATTTG
TTCAATACATGGTCAACATTTTTTCTACGCACATTC----------------------AACAA--TTTTCAAATACTTGT
TTAACATATTTTAAATACATGATCAACTTTTTTCACACATACTGC-ATAAATTTT-GTATACATGGTC------------
--AAT-ATTTTTCTATACACATTTAACATTTTTCAAATGCATGATTAATATTTTTCAAAATATTTATGAAAAGTATATTT
TGTAATATACAGTATATGTTTAGAATTTTTAGAA-GTGTAAAC---------AAAAGTAAAAAAAATTAA---GAAAAGA
ATACAAAGGTTAAAG-AAAC-AAAAA-AAATTGATGCGGTGGCCTCACGCGAGCTGGGCCGGCCCACTGAGGCCGCTACC
TTAAGCGAGAGCTGACGCAGTTTCGGTTGAAGCGAGACATAGTCGCGCCCGC----------------------------
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>chr7D_1
ATACATGGTCAACATTTTTCCTATAAACAATTTAAATGTTTTTTAAATGCCTTCTAACATTTTTCAAATAAATGGTCAAT
ATTTTTCTACCACATGGTAAACCATTTTTATATGAACATTTAACATTTTTCAAATGC-TTTATCAGCATTTTTTAAAATG
CAAAATTAACATTTTTTGAAT---ATGGTCAAC-TTTTTTCTATACACATTTAACATTTTATAAATGCTTGATTAA----
-------------------------------------------------------------------------T-ATTTT
TGAAATATTTGGTCAATATTTTTTCTATACACATTG----------------------AACAA--TGTTCAAATACTTGT
TTAACATATTTTTAATACATGATCAACTTTTTTCACACACATTGT-ATAT-TTTT-GTATACATGGTC------------
--AAC-ATTTTTCTATACACATTTAACATTTTTCAAATGCATGATTAACATTTTTCAAAATAT-AATGAAAAGTTTATCT
TGTAATATA-----TATGTTTCGAATTTTTTGAAAGTGTAAACCAAACTAAAAAAAG--AAATA---AAA---AAAAAGA
AAACAAAATGTCAAACAAAC-AAAAA-TAAAAGAGGTAGTGGCCCCACACGAGCTGGGTTGGTCCATTTAGTCCGCTGCC
TTCAACAAGAGCTGACTCTGTATCGCTTGCAGCGATACATAGTCGCACCCG-----------------------------
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>chr2A_123
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-------------------------------------------------------ATTTTCCAAATGCTTGATTAAATTT
TTT-AAATACTTGTTCAACATTATTTAAAAAACTTGATTAAT--TTTTCACATACATGATAAAAAAATCA---T-ATTTT
TTTAATACATGGTCAACAGTTTTTATATATAGTCAACAT-TTTTCCAAATACTTGTTTAGCATTTTTTTCAAATGCTTGA
TTAACATATTTTAAATACATGATCAACTTTTTTAACACACATTGT-ATAT-TTTTTGTATACACTTTTTGTATGTACGCT
ATAAT-TTTTTTCTATACACATTTAACATTTTTCAG-TGCATGATTAACATTTTTCAAAACAT-TACGAAAAGTACATTT
TGTAATATA-----TATGTTTAGAATTTTTGGAA-CACTAAAC---------AAAAGTAAAAAA---TCA---AAAAAAG
AAACAAAAGGTCAAACAAAC-A-----AAAAAGAGGCAGTGGCCTCGCGCGAGCTGGGCCGGCTCATTTAGGCCGCCGCC
TTCTGCTTGAGCTGATTATGTCTCGCTTACAGCGAGACATAGTCGTTCCC------------------------------
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>SNPs
-----S------------------S---S-----S---------------------------------------------
--------------------------------------------------SS--S---S----S------------S-S-
--------------S----------S---------------S------------S----------------S--------
---S--------------S-------S------------------S--------------------------SSS-----
--S----------S--------------------------S-----------------S---------S---------S-
-S-----S-S---------S----------------S-------------S-----S-----------------------
---S----------------------------------------------------------S----S-S----------
-SS-----------S-------------------------------------------S---------S-SSS-------
---------S----------S--------------------S------------------S-------------S-----
------------------SS--SS----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_844
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------------------------CGTCGCCGGCTTCTATTTTT------------------------------------
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>reverse_1919
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------------------------------------------------------------------------------TC
GCTGGATAAAGAGGGGGA--------------------------------------------------------------
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>forward_1319
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-------------------CCACCATGATCAAGGCCACT-----------------------------------------
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>reverse_2225
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----------------------------------------------------------------ACCTTGCTCTATCCCG
AGGT----------------------------------------------------------------------------
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