>input_sequence_67740
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--------------------------------------------------ATGGACGTCGCCGACGCCGCCTCCCCGTCT
GGCCAGGACCAGCA---GGGGCACAGGACGGTGTCGTCTGAGCCGCCGAAGCGCCCCGCGGGGCGGACCAAGGTCCATGA
GACGCGCCACCCGCTGTACCGCGGCGTGCGGCAGCGGGGACGGGTCGGGCAGTGGGTGTGCGAGGTGCGCGTGCCTGGGG
TGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACGCCGCCGTGCTCGCG
CTCTCCGGCCGCGCTGCCTGCCTCAACTTCGCCGACTCCGCATGGCGCATGCTGCCCGTCCTCGCGCCCGGGTCGTTCGG
CTTCGGCAGCGCGCGCGAGATCAAGGCCGCCGTCGCCGTCGCCGTCGTGGCGTTCAAGAAGCAGCAGATTA---TCCCAG
TGGCCGTCGCCGTCGTGGCGCTACAGAAGCAGCAGATTATCCCAGTG---------------------------------
---------GCCGTCGCCGTCGTGGCGCTCCAGAAGCAGCAGATTCCAGTCGCCGTCGCCCTCGTGGCGCTCCAGGAAAA
GCAGATCCCAGTCGCCGTCGCCGTCGTGGCGCTCC---ATCGGCAGCAGG------TTCCAGTCGACGACCCGGCAA---
------CCTCCGGCCCGGGCAGCGCTCTGTTTTACATGTCCTCCAGCGACTTGTTGGAGCTCGACGAGGAGCAGTGGTTT
GGCGGCATGGACGCCGGGTCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCACCGCCGGACGAAAGAGCGAGGCC
GGAGGACGGCGAGCAGAGCGGCGTC------CAGACGCCGCTATGGAGCCAGAGCCACTTGTTCAACTAA----------
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>chr5D_1_TraesCS5D01G317400
AAAAGTGTTCAACTTTTTTCTAAAAATGTTCACAAACTTTTTAGAAAATGTTCACATTTCTA---TTTTTGAATATTTTA
ATTAA-TATTGGAAATTTTAGAAAAATCACTTCAAATAAACAGTGTGTTTCTGAAAAAAAAACAAAACGCAAAACCACCT
GAAAACAGAAAACCAGAAAAATCGCTAGAAACGACAACGCACGGGAGAACAACTTGGGGGTGCA--GTGCGGTCCCATGT
GCGGTCGCTCGATG--------CGATTGCCGCACATTTGGTCGCACAGCGCGACACATAGGAGGTCCCGAGACTGGGCTC
GACCAAAAAAAAGG-GGTGCCGATACAGAATGTTGCTGGAAGAAAGAAATAGAGTAGGCAGGCAGCTGGCGAGAGCCAAT
TTGGGATATTTCCTTTTTTGGG------GTCTCCTTTGCGTGCCTTGATCAGTGGGAAAGCTTCCAACTTCTGCTCGGAT
ATTCTTAGGCACCGAAGAAGCGCTTACG-AAAATGACAAACCTCTCCAAAAATAGGTTCTATCCGTTAATGTGCGGTGAC
CATAAAAGAGGCAAGCAGGCACAACCTTGATTGGATCACATCGTATACTACATATTATATGGATGTGGTCCAAAGTACGC
CAATTATATGCGGAAAATATGTGGTCGGCAGTCGACCCCGCGTCCACATAAACAACCAATCTCATGTCGAAATCCTCGTC
GCTAAGCGAGGTATCGGTCCCG----------------------------------------------------------
GCTCCGTGGGTCCTTGTGAAATCCTATGGCCAAGTGGCAAGATGATAGACAGCCAAGATATTTGAGTGGCATTGCTGACT
GTACACCGGAAAAGGACGCGCGCCAG----GAACCTGCCGCGCTGCTTCATGTGAGCGTGAGGGTGTGAGTGACGCGCCT
ATATAG-GCTTCCCCCGCCGCGT-CCCCTTCTTCTCAGTTCTCACCCACCCAAACACCGCCGCTGAAACCTCCGGTTCTC
AGC----ACACAGCGACCTGCTCAACCGTCTCCACTAGCGCTCGGCCAAGATGGACGTCGCCGACGCCGCCTCCCCGTCT
GGCCAGGACCAGCA---GGGGCACAGGACGGTGTCGTCTGAGCCGCCGAAGCGCCCCGCGGGGCGGACCAAGGTCCATGA
GACGCGCCACCCGCTGTACCGCGGCGTGCGGCAGCGGGGACGGGTCGGGCAGTGGGTGTGCGAGGTGCGCGTGCCTGGGG
TGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACGCCGCCGTGCTCGCG
CTCTCCGGCCGCGCTGCCTGCCTCAACTTCGCCGACTCCGCATGGCGCATGCTGCCCGTCCTCGCGCCCGGGTCGTTCGG
CTTCGGCAGCGCGCGCGAGATCAAGGCCGCCGTCGCCGTCGCCGTCGTGGCGTTCAAGAAGCAGCAGATTA---TCCCAG
TGGCCGTCGCCGTCGTGGCGCTACAGAAGCAGCAGATTATCCCAGTG---------------------------------
---------GCCGTCGCCGTCGTGGCGCTCCAGAAGCAGCAGATTCCAGTCGCCGTCGCCCTCGTGGCGCTCCAGGAAAA
GCAGATCCCAGTCGCCGTCGCCGTCGTGGCGCTCC---ATCGGCAGCAGG------TTCCAGTCGACGACCCGGCAA---
------CCTCCGGCCCGGGCAGCGCTCTGTTTTACATGTCCTCCAGCGACTTGTTGGAGCTCGACGAGGAGCAGTGGTTT
GGCGGCATGGACGCCGGGTCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCACCGCCGGACGAAAGAGCGAGGCC
GGAGGACGGCGAGCAGAGCGGCGTC------CAGACGCCGCTATGGAGCCAGAGCCACTTGTTCAACTAATTTAGCA---
-GTGTAAAGTTGTACCATAGTCCATAGATAGTTGTGTTCTTTTCAATTTGGAGAGAAACACAGTAGCATCTTGTTCCTTC
GTTGTACT-------------ATAAGCTCCCGGTTTGAGTGTTTGTGAGGAAGGGGATTGCATATTACACCAATTATTGG
TCATTGGTCGCCTTCTTCCTGATTTGGGAAAAACAGAGTAGGCGGTGGGTTCCTTCATTCATAGTAGTA---TTTGTCAA
GTTCCCGGTTTCTACTTTC-----GGGCGAAAGGCTAGATTGTTCAGTACATCAATTATTGGTACGGAACTCGAGTGTAT
ATCGTGCACTCCAGGAATCCATTATGTTTTGAGATTGATGTTGCTTAGACTTTGCTATGCTTAGTGCTTGGCATTAGGGC
CTGAGTGCCATGATTTCAGATCTGAACCCTCTATGTTTTCATGAATATATTTGAGTTGTTGATCCTATCTGCTAGTTATA
TGCACTTCTTGTTGTTTTGATCCGTAGA-CCCCAAGGTGACAACAA-TTGGGATACTCTCCGGGGATGGCTCTAATTCGA
GG--AGTTCATGTATTCACAATGTGTTAATGCTTTATTCTGGTTCTCTATTAAAAGGAGGCCTTAATATCCCTTAGTTT-
CCTTATGAACCCTGCTGTCATGGGAGGGTACGACAAAAGATGTCATGCAAGTTCTTATTATAAGCATGTATGACTTTATA
CAGAATACATGCCTACATTATTTTGTTGAATTGGAGCTATTG-TGCATCCCTCTAGGTTGTGACTGTTACATGATGAATG
TCATCCAACACAAATATCCATCACTGATCCAATGCCTACGCTTTGCTCATATTGATCTTTGCTAAGTTACTATTGTTGCT
CATGCTGTTACAATCACCACAAAACTACTATTGTTCCTGTTACCGCTACTATTGTTACTGTTACTATTACTATCAAAACT
ATCAAACTACTATGCTACTAAACACTTTGCTGCAGATATTTAGTTCTTCAGGTGTGGCTGA
>chr5A_17
TTTTAAATATTGTTCAACATTTCTCA------------------AAAATGTTCACATTTCTAATTTTTTTGAGTATTTTA
ATTAAATATTGGCAAGTTTTAAAAAATCACTTCAAATAT--AGTGTGTTTATGAAAAAA---CAAAACGCAAAACCACCA
AAAAACTGAAAACCAGAAAAATTGCTAGAAACGGCAACGCACGGGAAAACAACTTGGGGACGCAGTGTGCCGTCCCATGT
GCGGTAGGTCGGTAGCTCGGTCCGATTGCCGCACATTTGGTCGCACAGCGCGACACATAGGTGGTCCCGAGGCTGGGCTC
GACAAAAAAAAAAGCGGTGCCGAGACAGAGTGTTGCTGGAAGAAAGAAATAGAGTTTGCAGGCAGCTGGCGAGAGCCATT
TTGGGATATTTCCCTCTTCTTTTTTTTTGTCTCCTTTGCGTGCCTTGATCAGTGGGAAAGCCTCCGATTTCTGCTCGGAT
ATTCTTAGGCACCGAAGAAGAGCTTACGAAAAATGACAAACCTCTCCAAAAATAGGTCCTATCCGTTAACGGGCGGTGAC
CATAAAAGAGGCAAGCAGGCACAACCTTGATTGGATCGCATCA-----TATATCTTATATGGATGTGGTCCAAAGTACGC
TAATTAGTATGG---AATATGTGGTCGGCAGTCGACCCCGCGTCCACATAAACAACCAATCTCATGCCAAAATCCCCGTC
GCTAAGCGAGGTATCGGTGACTCCACTCACCACCCGCCGGAGGCCGGTGACGTGAGGAGGCAGGTGCGCCGCTGAACGTC
GCTCCGTGGGTCCTTGTGAAATCCTATGGCCAAGTGGCAGGATGACAGACAGCCAAGATATTTGAGTGGCAGTGCTGACT
GTTCACCGGAAAAGGACGCGCGCCATGAAGGAACCTGCCGCGGTGCTTCAT------------------GTGACGCGCCT
ATATAG-GCTTCCCCCGCCGCATGCCCCTTCTTCTCAGTTCTCACCCACCCAAACACCGCCGTTGAAACCTCCAGTTCTC
AGCGGAAACACAGCAACCTGCTCAACCGTCTCCACTAGCTCTCGACCAAGATGGACGTCGCCGACGCCGCCTCCTCATCT
GGCCAGGAGCAGCA---GGGGCACAGGACGGTGTCGTCTGAGCCGCCGAAGCGCCCCGCGGGGCGGACCAAGGTGCATGA
GACGCGCCACCCGCTGTACCGCGGCGTGCGGCAGCGGGGCCGGGTCGGGCAGTGGGTGTGCGAGGTGCGCGTGCCCGGGG
TGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCGCCACCGCCGAGATGGCGGCGCGCGCGCACGACGCAGCCGTGCTCGCG
CTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCGTGGCGCATGCTGCCCGTGCTCGCGGCCGGGTCGTTCGG
CTTCGGCAGCGCGCGCGAGATCAAGGCGGCCGTCGCCGTCGCCGTCGTGGCTTTCCAGAAGGAGCAGATTA---TCCCAG
TCGCCGTCGCCGTCGTGGCGCTACAGAAGCAGCAGATTATCCCAGTCGCCGTCGCCGTCGTA------------------
------------------------GCGCTCCAGAAGCAGCAGATTCCAGTCGCCGTCGCCCTGGTGGCGCTCCAGGAACA
GCAGGTCCCAGTGGCTGTCGCCGTCGTGGCGCTCC---ATCGGCAGCAGG------TTCCAGTCGCGTGCCCGGCAA---
------CCTCCGGCCCGGGCAGCGCTCTGTTTTACATGTCGTCCAGCGACTTGTTGGAGCTGGACGAGGAGCAGTGGTTT
GGCGGCATGGAGGCCGGGTCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCACCGCCGGACGAAAGAGCGAGGCC
GGAGGACGGCGAGCAGAGCGGCGTC------CAGACGCCGTTATGGAGCCAGAGCCACCTGTTCAACTAATTTAGCA---
-GTGTAAAGCTGTACCATAGA------------------------------------------TAGCATCTTGTTCCTTC
GTTGTACTTCATTGTACTACTATAAGCTCCCGGTTTGAGTATTTGTGACGTAGGGGAT----------------------
-------TCGCCTTCTTCCTGATTTGGGAAAAACAGAGTAGGTGGTGTGTTCCTTCATTCATAGTAGTAGTGTTTGTCAA
GTTCCCGTTCCGGTTTCTAGTTTTGGGCGAAAGGCTAGATTGTTCAATACATCAATTATTGGTACAGAACTCGAGAGTAC
ATCGTGCACTCCAGGAATCCAT----------------------------------------------------------
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>chr5B_667
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------------------------------------------------TAAACAACCATTCTCATGTCAAAATCCTCGTC
GCTAAGCGAGGTATCGGTGGCTCCACTCACCCA---CCGGAGGCCGGTGACGTGAGGAGGCAGGTGCGCCGCTGAACGTC
GCTTTGTGGGTCCTTGTGAAATCCTATGTCCAAGTGGCAAGATGACAGACAGCCAAGATATTTGAGTGGCATTGCTGACT
GTACACCGGAAAAGGACGTGCGCCAT----GAACCTGCCGCGCTGCTTCATGTGAGCGTATGCGTCTGAGTGACGCGCCT
ATATAGGGCTTTCCCCGCCGCAT-GCCCTTCTTCTCAGTTCTCACCCACCCAAACACCGCCGCTGAAACCTCCAGTTCTC
AGC----ACACATCGACCTGCTCGACCGGCTCCACTAGCGCTCGTCCAAGATGGACGTCGCCGACGCCGCCTCCCCGTCT
GGCCAGGAGCAGCA---GGGGCACAGGACGGTGTCGTCTGAGCCGCCGAAGCGACCCGCGGGGCGGACCAAGGTACATGA
GACGCGCCACCCGCTGTACCGCGGCGTGCGGCAGCGGGGCCGGGTCGGGCAGTGGGTGTGCGAGGTGCGCGTGGCCGGGG
TGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACACCGCCGTGCTCGCG
CTCTCCGGCCGGGCTGCCTGCCTCAACTTCGCCGACTCCGCCTGGCGCATGCTGCCCGTGCTCGCGGCCGGGTCTTTCGG
CTTCGGCAGCGCGCGCGAGATCAAGGCCGCCGTCGCCGTCGCCGTCGTGGCTTTCCAGAAGGAGCAGATTA---TCCCAG
TCGCCGTCGCCGTGGTGGCGATCCAGAAGCAGCAGATTATCCCAGTCGCTGTCGCCGTCGTGGCGATCCAGAAGCAGCAG
ATTATC----CCGTCGCCGTCGTGGCGCTCCAGAAGCAGCAGATTCCAGTGGCCGTCGCCCTCGTGGCGCTCCAGGAACA
GCAGGTCCCAGTCGCCGTCGCCGTCGTGGCGCTTC---ATCGGCAGCAGG------TTCCAGTCGCGTGCCCGGGAA---
------CCTCCGGCCCGGGCAGCGCTCTGTTTTACATGTCGTCCAGCGACTTGTTGGAGCTCGACGAGGAGCAGTGGTTT
GGCGGCATGGAGGCCGGGTCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCACCGCCGGGCGAAAGAGCGAGGAC
GGAGGACGGCGAGCAGAGCGGCGTC------CAGACGCCGCTATGGAGC------CACTTGTTCACCTAATCTAGCA---
-G------------------------------------------------------------------------------
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--------------------------------------------------------------------------TGTAAA
GTT-----------------------------------------------------------------------------
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-------------------------------GTAC--------------------------
>chr5A_966
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---------------ACGTGCTCAACCATCTCCACTAGCTCTCGACTCAGATGGACGTCGCCGACGCTGCCTCCAAGTCC
GGCCAGCATGAGCA---GGGTCACAGGACGGTGTCGTCGGAGCCGCCGAAGCGGCCGGCGGGGCGGACCAAGTTGCACGA
GACGCGCCACCCGCTGTACCGGGGCGTGCGGCGCCGTGGCCGGGTCGGGCAGTGGGTGTGCGAGGTGCGCGTGCCCGGGG
TGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACGCCGCGGTGCTCGCG
CTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGGATGCTGCCCGTGCTTGCGGCCGAATCGTTCGG
CTTCGGCAGCGCGCGGGAGATCAAGC------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTGCC--------------------------------
----------GTCGCCGTTGCCGTCGTTGCGTTCC---AGCAGCAGCAGATTATTCTTCCAGTCGCGTGTCCAACGGTGG
AGGCGGCCGCCAGCCCGAGCAACTCTCTGTTTTACATGTCGTCCGTCGACTTGCTGGAGCTCGACGAGGAGCAGTGGTTT
GGCGGCATGGACGCTGGGTCGTACTACGAGAGCTTGGCGCAGGGGATGCTCATGGCGCCGCCGGACGACAGAGCGAGGCG
GGAGGACGCCGAGCAGACCGGCGTC------GAGACACCG----------------------------------------
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>chr1B_967
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----------------CCTGCTCAACCATCTCCACTAGCTCTCGACTCAGATGGACGTCGCCGATGCTGCTTCCAGGTCC
AGCCAGCAGGAGCA---GGGTCACAGGACCGTGTCGTCTGAGCCGCCGAAGCGGCCGGCGGGGCGGACCAAGTTCCACGA
GACGCGCCACCCGCTGTACCGCGGCGTGCGGCGCCGTGGCCGGGTCGGGCAGTGGGTGTGCGAGGTGCGCGTGCCCAGGG
TGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACGCCGCGGTGCTCGCG
CTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGGATGCTGCCCGTGCTTGCGGCCGGGTCGTTCGG
CTTCCGCAGCGCGCGGGAGATCAAGC------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTGCT--------------------------------
----------GTCGCCGTGGCCGTCGTCGCGTTCC---AGCAGCAGCAGAATATTCCTCCAGCCGCGTGTCCAACGGCGG
AGCCGGCCGCCAGCCCGAGCAACTCTCTGTTCTACATGTCGTCTGGCGACCTGCTGGAGCTCGACGAGGAGCACTGGTTT
GGCGGCATGGACGCCGGGTCGTACTACGACAGCTTGGCGCAGGGGATGCTCGTGGAGCCGCCGGACGACAGAGCGAGGCG
GGAGGACGTCGAGCAGACGGGCGTCGAGACACCGACGCCGCTATGGAGC------TATTTGTTTGACTAATTCAACACGC
AG------------------------------------------------------------------------------
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--------------------------------------------------------------------------TGTAAA
GTT-----------------------------------------------------------------------------
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-------------------------------GTCGATAGT---------------------
>chr5D_977
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--------------------------CGTCTCCGCCAGCTCTCGACTCAGATGGACGTCGCCGACATCGCCTCCCCGTCT
GGCCAGCAGGGGCATCGGGGACACCGGACGGTGTCGTCGGAGCCGCCGAAGCGCCCCGCGGGGCGGACCAAGTTCCACGA
GACGCGCCACCCGCTGTACCGCGGCGTGCGGCGCCGTGGCCGCGTCGGGCAGTGGGTGTGCGAGGTGCGCGTGCCTGGGA
TCAAGGGCTCCAGGCTCTGGCTCGGCACCTTCAACACGGCCGAGATGGCGGCGCGCGCGCACGACGCCGCTGTGCTCGCG
CTCATCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGCATGCTGCCCGTGCTCGCGGCCGGGTCGTTCGG
TTTCGGCAGCGCGAGCGAGATCAAGGCCGCCGTCGCCGTGGCCGTCGTCGCGTTCCAGCGGAAGCAGATTATTCCG---G
TCGCCGTCGCCGTCGTGGCGCTCCAGCAGCAGCAGGTT---CCGGTCGCCGTCGCCGTCGTGGCGCTCCAGCAGAAGCAG
GTTCCGGTCGCCGTGGCCGTCGTGGCGCTCCAGCAGCTGCAGGTTCCG--------------------------------
----------GTCGCCGTGGCCGTCGTGGCGCTCC---AGCAGCAGCAGATTATTCTTCCAGTCGCGTGCCTGGCGCCGG
A---------------------------GTTTTACATGTCTTCCGGCGACCTGTTGGAGCTTGACGAGGAGCAGTGGTTT
GGCGGCATGGACGCTGGGTCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCGCCGCCGGACGAAAGAGCGAGGCC
GGAGCACGGCGAGCAGAGCGGCGTC------CAGACGCCGCTATGGAGC-------------------------------
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>chr5A_977
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--------------------------CGTCTCCGCCAGCTCTCGACTCAGATGGACGTCGCCGACATCGCCTCCCCGTCC
GGCCAGCAGGAGCA---GGGCCACCGGACGGTGTCGTCGGAGCCGCCGAAGCGGCCCGCGGGGCGGACCAAGTTCCACGA
GACGCGCCACCCGCTGTACCGCGGCGTGCGGCGCCGTGGCCGCGTCGGGCAGTGGGTGTGCGAGGTGCGCGTGCCCGGGA
TCAAGGGCTCCAGGCTCTGGCTCGGCACCTTCAACACGGCCGAGATGGCGGCGCGCGCGCACGACGCCGCCGTGCTCGCG
CTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGCATGCTGCCCGTGCTCGCGGCCGGCTCCTTCGG
CTTCGGCAGCGCGAGCGAGATCAAGGCCGCCGTCGCTGTCGCCGTCGTCGCGTTCCTGCGGAAGCAGATTGTTCTTCCAG
TCGCCGTCGCCGTCGTGGCGCTCCAGCAGAAGCAGGTC---CCGATCGCCGTCGCCGTGGTGGCGCTCCAGCAGAAGCAG
GTTCCGGTCGCCGTCGCCGTGGTGGCGCTCCAGAAGCTGCCAGTTCCG--------------------------------
----------GTCGCCGTCGCCGTCGTGGCGCTCC---AGCAGCAGCAGATCATTCTTCCAGTCGCGTGCCTGGCGCCCG
A---------------------------GTTTTACATGTCTTCCGGCGACCTGTTGGAGCTGGACGAGGAGCAGTGGTTT
GGCGGCATGGAGGCCGGGTCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCGCCGCCGGACGAAAGAGCCAGGCC
GGAGAGCGGCGAGCAGAGCGGCGTC------CAGACGCCGCTATGGAGC------TGCTTGTTCGACTAATTTAGCGATA
C-------------------------------------------------------------------------------
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--------------------------------------------------------------------------TGTCAA
GTT-----------------------------------------------------------------------------
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-------------------------------GTAGATAGTC--------------------
>chr5B_979
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----------------------------TCTCCGCTAGCTCTCGACTCAGATGGACGTCGCCGACATCGCCTCCCGGTCC
GGCCAGCAGGAGCA---GGGGCACCGAACGGTGTCGTCGGAGCCGCCGAAGCGCCCTGCGGGGCGGACCAAGTTCCACGA
GACGCGCCACCCGCTGTACCGCGGCGTGCGGCGCCGTGGCCGCGTCGGGCAGTGGGTGTGCGAGGTGCGCGTGCCCGGGA
TCAAGGGCTCCAGGCTCTGGCTCGGCACCTTCAACACGGCCGAGATGGCGGCGCGCGCGCACGACGCCGCGGTGCTCGCG
CTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCCTGGCGGATGCTGCCCGTGCTCGCGGCCGGCTCGTTCGG
CTTTGACAGCGCGCGGGAGATCAAGGCCGCCGTCGCCGTGGCCGTCGTCGCGTTCCAGCGGAAGCAGATCA---TTCCAG
TCGCCGTCGCCGTCGTTGCGCTCCAGCAACAGCAGGTT---CCGGTCGCAGTGGCCGTGGTGGCGCTCCAGCAGAAGCAG
GTCCCGCTCGCCGTCGCCGTCGTGGCGCTCCAGCAGCTGCAGGTTCCG--------------------------------
----------GTCGCCGTCGCCGTCGTGGCGCTCCAGCAGCAGCAGCAGATCATTCTTCCAGTCGCGTGCCTGGCGCCGG
A---------------------------GTTTTACATGTCTTCCGGCGACCTGTTGGAGCTGGACGAGGAGCAGTGGTTT
GGCGGCATGGAGGCCGGGTCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCGCCGCCGGACGAAAGAGCGAGGCC
GGAGCACGGCGAGCAGAGCGGCGTC------CAGACGCCACTATGGAGC------TGCTTGTTCGACTAATTTAGCA---
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>chr5D_2150
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----------------ATCCACTATGTTCTGATATTGATGTTGCTATGACTTTGCTATGCTTAATGCTTGTCACTAGGGC
CCGGGAGCCATTATTTCAGATCTGAACCCACTATGTTTTCATGAATATATTTGAGTTCTTGATCCTATCTCCTAGTTATA
TCCACTTGTTATTGTTTTGATCCATAGA-CCCCAAAGTGACAATAG-TTGGGATACTCTCCGGG-ATGACTGTAATTCGA
GG--AGTTCATGTATTCACCATATGTTAATGCTTTGTTCTGGTTCTCTATGAAAAGGAGGCCTTAATATCACTTAGTTT-
CCTTATGAACCCCGCTACCACGGGAGGGTAGGACAAAAGATGTCATGCAAGTTCTTATTATAAGCACATATGACTATATA
CAGAATACATGCCTACATTACATTGATGAATTGGAGCTATTG-TGTATCGCTCTAGGTTATGATTGTTATATGATGAATG
TCATCCAACACAAATATCCATCACCGATCCAATGCCTATGTTTTTTGCCTATTGATCTTTGCTAAGTTACTTTGGTTGCT
GCTGCTATTACAATCACTACAAAACTACTACTGCTACTGTTACCGTTACTATTGCTACTGCTACTACTACTATCAA-ACT
ATCATATTACTTTGCTATTAAACACTTTGTCGCAAATATTTAGTTCTCCAGGTGTGGTTGA
>chr5D_2150
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----------------ATCCACTATGTTCCGAGATTGATGTTGTTATGACCTGGCTATGGTTAATGCTTGTCACTAGGGC
CCGAGTGCCATGATTTCAGATCTGAACCCTCTATGATTTCATGAATATATTTGAGTTCTTGATCCTACCTGCTAGTCATA
TGAACTTGTTATTATTCTGATCCGTAGA-CCCCATCGTGACAATGGTGTGGGATACTCTCCGGGGATGAGTGTAATTCGA
GG--AGTTCATCTATTCACCATGTGTTAATGCTTTGTTCTGGTTCACTATTAAAAGGAGGCCTTAATATCCCTTAGTTT-
CCTTATGGACCCCGTTGCCATGGGAGGGTAGGACAAAATATGTCATGCAAGTTCTTATTATAAGCACATATGACTATATA
CGGAATACATGCCTACACTATATTGATGAATTGGAGCTAT-G-TGTATCGCTCTAGGTTTTGACTGTTACATGATGAATG
TCATCCGACATAATTATCCATCACTAATCCAATGCGTATGCTTTTCGCATATTGATCTTTGCTAAGTTACTACTGCTGCT
GCTGCTATTACAATCACTATAAAACCACTATTGTTACTGTTACCGTTACTATTGCTACTATTACCAGTGCTATCAA-ACT
ATCATACTATTGTGCTACTGATCACTTTACTGTAGATATTTAGTTCTTCAGGTGTGGTTGA
>chr5A_2150
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----------------ATCCACTATGTTTTGAGATTGATGTTGCTATGACTTTGCCATGCTTAGTGCTTGTCATTAGGGC
CTGAGTGCCATGATTTCAGATCTGAGCCCTCTATATTTTCATGAGTATATTTGAGTTCTTAATCCTATCTGCTAGTTATA
CGCACTTCTTATTGTTCTAATCCGTAGA-CCCCAAGGTGAAAACAA-TTGGGATACTCTCCAGGGATGACTGTAATTCGA
GG--AGTTCATGTATTCACTATGTGTTAATGCTTTGTTCTGGTTCTCTATTAAAAGGAGGCCTTAATATCCCTTAGTTT-
CCTTATGGACCCTGCTGCCATGGGAGGGTACGACAAAACATGCCATGCAAGTTCTTATTATAAGCACGTATGACTATATA
CGGAATACATGCCGACATTATATTGATGAATTGGAGCTATTG-TGCATCCCTCTGGGTTGTGACTGTTACATGGTGAATG
TCATCCAACACAAATATCCAACGCTGATCCAATGCCTACACTTTGCTCATATTGATCTTTGCTATGTTACTACTGTTGCT
CCTGTTGTTACAATCACCACAAGACTACTTTTGTTCCTATTACCGCTACTATTGTTAATGTTACTATTACTATCAAAACT
ACCAAACTACTATGCTACTAAACACTTTGCTGCAGATATTTAGGTCTCCAGGTGTGGGTGA
>chr5B_2150
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----------------ATCCACTATGTTCTGAGATTGATGTTGCGATGACTTTGCTATGCTTAATGCTTGTCACTAGGAC
CCGAGTGCCATGATTTTAGATCTAAACCCTCTATGTTTTCATGAATATATTTGAGTTCTTGATCATGTCTGCTAGTTATA
TGCACTTGTTATTATTCTGATCCATAAA-CCCCAAAGTGACAATAG-TTGGGATACTCTCCGGGGATGACTGTAATTCGA
GA--AGTTCATGTATTCACCATGTGTTAATGCTTTGTTCCGGTTCTCTATTAAAATGAGGTCTTAATATCCCTTAGTTT-
CCTTATGGACCCCGCTGTCAGGGGAGGGTAGGACAAAAGATGTCATGCAAGTTCTTATTATAAGAAAGTATGACTATATA
CAGAATAGCTGGCTACATTACATTAATGAATTGGAGCTATTG-TGTATCACTCTAGGTTGTGACTACTACATGATGAATG
TCATCCAACACAAATATCCATCGCTGATCCAATGTGTATGATTTTTTCATATTGATCTTTGCTAAGTTACTTTCGTTGTT
GCTGCTATTACAATCACTACAAAACCGCTACTGTTACTGTTACTGTTACTATTGCTACTGCTACTATTGCTATC-AAACT
ATCATACTACTATGCTACTAAACACTTTGCTACATATATTTAGTTCTCTAGGTGTGGTTGA
>chr7D_2150
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----------------ATCCATTATATAATGAGACTGATGTTGCTATGACTTTGTTTTGCTTAATGCTTGTCACTATGGC
CCGAGTGCCATGATTTCATATCTGAAGCCTTTATGTTTTGATGAATATATTTGAGTTCTCGATCCTATCTGCTAGTTATA
TGCACTTGTTATCGTTCTGATCCGTAGACCCC-AAGGTGAGAACAA-TTGGGATACTCTCCGGGGATGACTGTAATCCAA
GG--AGTTCATGTATTCACTATGTGTTAATGCTTTGTTCCAATTATCTATTAAAAGGAGGACTTAATATCCCTTAGATTT
CCTTATGGACCCTGCTGCCATGGGAGGGTAGGACAAAAGATGTCATGCAAGTTCTTATTATAAGCACGTATGACTATATA
TGAAATACATGCCTACATTAAATTGATGAATTGGAGCTATTG-TGTATAGCTCCAGGTTGTGACTGTTACATGATGAATG
TCATCCAACAAAAATATCCATCACT-ATCCAATGCCTAAGCTTTGCTCATATTTATCTTT-CTAAGTTACTACTATTGTT
GTTGCTGTTACAATCATCACAAAACTACTATTGTTATTGTTACTGCTACTATTGCCACTATTACTTTTACTATCAAAACT
ATCAAACTACTGTGCTACTTAACACTTTGTTGCAGACAAATAATTCTCCAGGTGTGGTTGA
>chr7D_2150
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----------------ATCCACTATGTTTTGAGATTGATGTTGTTGTGACTTTGCTATGCTTAATGCTTGTCA-TAGGGC
CCGAGTGCCATGATTTTAGATCTGAACTCTCTATGTTTTCATGAATATATTTGAGTTCTTGATCCTATCTGCTAGTTAGA
TGCACTTGTTATTGTTCTGATCCGTAGACCC--AAAGTGATAATAG-TTGGGATACTCTCCGGGGATGACTGTAATTCGA
GG--AGTTCATGTATTCACCATGTGTTAATGCTTTGTTCCGGCTCTCT-TTAAAAGGAGGCCTTAATATCCCTTAGTTT-
CCATATGGACCCCGCTGCCATGGGAGGGTAGGAAAAAAGATGACATGCAAGTTCTTGTTATAGGCATGTATGACTATATA
CAAAATACATACCTACATTACACTGATGAATTGGAGCTAT-GTTGTACCGCTCTAGGTTGTGACTGTTATATGACGAATA
TTATCCAATACAAATATCCATCACTGATCCAATGCCTACGTTTTTCGCATATTGATCTTTGCGAAGTTACTTTCGTTGTT
GTTGATGTTACCATCGCTACGAAATTGCTACTGTTACTGTTACCATTACTATTACTACTGTTACTACTACTATC-AAACT
ATCATACAACTATGCTACTAAACACTTTACTGCAGATATTTAGTTCTCCAAGTGTGGTTGA
>chr2D_2150
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----------------ATCCATTATGTTCTGAGATTGATGTTGCTATGACTTTGCTATGCTTAATGCTTGTCACTAGGGC
CTGAGTGCAATGATTTCTGATCTGAACTCTGTTTATTTTCATGAATATATTTGAGTTCTTGATCCTATCTGCTAGTTATA
TGCACTTGTTATTGTTGTTATCTGTAGACCCCCAAAGTGGCAATAG-TTGGGATACTCTCCGGGGATGGCTGCAATTCGA
GG--AGTTCATGTATTCACCATGTGTTAATGCTTTGTTCCGATTCTCTATTAAAAGGAGGCCTTAATATCCCTTAGTTT-
CCTTTTGGACCCTGCTGCCACGGGAGGATAGGACAAAAGATGTCATGCAAGTTCTTATTGTAAGCATGTATGACTATATA
CGGAATACATGCCTACATTACATTGACGAATTTGAGCTATTG-TGTATCGCTCTAGGTTGTGACTGTTATATGATGAATG
GCATACAACACAAATATCCACCACTGATCCAATGCCTACGCTTTTCTCATATTGATCTTTGCTAAGTTACTACTGTTGCT
---GTTGTTACAATCATCACAAAC-TACTACTGTTACCATTCCCATTACTATTGCTGCTGTTACTGCTACTATCAAAACT
ATCAAACTACTGTGCTAATAAACGCTTTGTTACAGAGATATTATTTACGAGGTGTGGTTGA
>chr6D_2150
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----------------ATCCACTATGTTCTAAGAGTGATGTTGCTATGACTT-GCTATGCTTAATGCTTGTCAGTAGGGC
CCGAGTGCCATGATTTCAGATCTGAACCCTCTATGTTTTCATGAATATATTTAAGTTCTTGATCCTATCTGCTTGTTGTA
TGCACTTGTTATTGTTCTGATCCGTAGACCCC-AAAGTGATAATAG-TTGGGATACTCTCCGGGGATGACTGTAATTCGA
GGAGAGCTCATGTATTCACCATGTCTTAATGCTT-GTTCTAGTTCTCTATTAAAAGGAGGCCTTAATATCCCTTAGTTT-
CCTTATGGACCCCACTGCCACGGGAGGGTAGGACAAAAGATGTCATGCAAGTTCTTATTATAAGCACATATGACTATATA
CGGAATATATTTCTACATTGAATTGATGAATTGAAGCTATTG-TGTATCGCTCTACGTTGTGACTGTTATATGATGAATA
CCATCCAACACAAATATCCATCACTAATCCAATGCCTACGCTTTTCTCATATTGATCTTTGCTAAGTTACTACTGATGTC
---GGTGTTACAATCATCACAAAA-TGCTACTGTTACTGTTCCTATTACTATTGCTACTGTTACTGCTACTATCAAAACT
ATCAAACTACTATGCTACTAAACACTTTGCTACAGAGATATAATTTCTCAGGTGTGGTTGA
>chr5B_2241
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---------------------------CCTCTATGTTTTCATGAATATATTTGAGTTCTTGATCCTATCTGCTAGTTATA
TGCACTTCTTATTGTTTTGATCCATAGACCCC-AAGGTGACAACAA-GTGGGATACTCTCCGGGGATGACTCTAGTTCGA
GC--AGTTCATGTATTCACAATGTGTTAATGATTTTTTCTGGTTCTCTATTAAAAGGAGGCCTTAATATTCCTTAGTTT-
CCTTATGAACCCTGCTGCCATGGGACGGTAGGACAAAAGATGCCATGCAAGTTCTTATTATAAGCATGTATGACTTTATA
CGGAATACATGCCTACATTATATTGTTGAATTGGAGCTATTG-TGCATCCCTCTAGGTTGTGACTATTACATGATGAATG
TCATCCAACACAAATATCCATCGTTGATCCAATGCCTACGCTTTGCTCATATTGATCTTTGCTAAGTTACTATTGTTGCT
CATGCTGTTACAATCACCACAAAACTACTATTGTTCCTATTATCGCTTCTATTTTTATTGTTACTATTACCATCAAAACT
ATCAAACTACTATGCTACTAAACACTTTGCTGCAGATATTTAGTTCTTCAGGTGTGGCT--
>SNPs
SSSSSSS-SSSSS-SSSSSS-SSSS-SSSSSSSSSSSSSSSSSS----------------------------S-------
------------S--S---SS-----------------SSS---------S--------SSS-----------------S
S-----S---------------S----------S------------S------------SS---------S---------
-----S-S---S-S-----------------------------------------------S---------S--------
---S--------S----------S-----S-------------------------SS---------------------S-
-------------S-S--SSSS---------------------------------------S---S-S------------
--------------------S------------------------------------S-----------S-S--------
-------------------------------------S----SSSSSS--S--S--------------------------
S-----SSSSS-SSS-----------------------------------------------------S-----------
------------------SS-S----------------------------------------------------------
---------------------------------------------S----------------------------------
-------------------------S---------------------------------SS-S--S--------------
---------------------S---------------------------------------------------S------
--------------------------------------------S-----------------------------------
--------S-----------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S------S-------------
-------------------------------------------------------S-----S------------------
-S--------------------------------------------S---------------------------------
------------------------------------------------------------------------------S-
----S------------------------------------------------------------SSSS-----------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
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---------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
----------------------------------------S-------S-S-------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSS-----------------------------------S----S--------------------------------
-------S-SSSSSS-S-S---------------------------S------------------S---------S---S
---------------------------------------------SS-----------------------S---------
---------------------------------------------------------S----------------------
----------S---------------------------------------------------------------------
-----------------------------------S--------------------------------------------
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---------------------S----------------------------------------------------------
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>forward_946
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----------------------------------------------TTCATGTGAGCGTGAGGGTG--------------
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>reverse_2157
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----------------------------------------------------------------------------TTGG
TCATTGGTCGCCTTCT----------------------------------------------------------------
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