>input_sequence_67721
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------------------------------------ATGCAGAGCGGCAAGA-AGCAGTACATCGCCTGCCACCAAGGGT
TCAAGGTGCTCAAGCTCGACTACAGGCAAGGACACGTGTGGTCATCGCCGCCGGCGTCGTTCTCCATGTGCGTCTTCCTC
CCG------GACGACCGCGACGGGCTGCAAGGCCTGGTCCAGAGGATCGCGTCCAGCCCGGACTTCATCCGCGCACACCT
TCCGACGAGACTCGTCTCCGTCGGCGACTTCAAGCTGCCCAGATTCAAGCTTGCCTTTTCGGCCGACATGTCCGACATTC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TCCGGCGGTTGGGACTCCATGTGGCG------------GGAGCCGACATGTCCAAC
ATGGTGGAGGACGACGGCACCGGCAGGCCGCTGGCTCTGAGCGGTATCGTCCACAAGGCTGTTATTGAGGTGAACGAGGA
TGGTACCGAGGCGGCGGCCGTGACCGCCGGCCTAATGTGCGGCTGCGCCCCACCACCGAAGACACCGCCGGTTCTCGTGG
ATTTCGTTGCTGACCATCCCTTTGCCTTCTTTGTAATCGAGGAGGAGTCCGGCGCCATCGTCTTCGCTGGGAACATCCTT
GAACCCTCTCCGTCGATTCCTGGAGAGAACCTTCGTCGCCGTGAGTCCGTACGTCGTGCTCCTAACT---TCGTCGGGAG
GAGGCCCGAGCATCCATGGACTTTGGGTGCAATCGATGAGAAACAGCTGCT-----------------------------
--------------------------------------------------------------------------------
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--CGGGGTATACTCAAGGGGTATGGATGGCCGTCCATTTGTGCAGCATGAGGCTGCTTCATGTAATCCTATTCTTCTTTT
CGCTTGTGTCTGCCTAGTTGTGGCCTTTTTCTTTCAACTTGTACGTCTTTTGGTGATGTAA-------------------
--------------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G112700
TCCAGCAGCTGCTCGCCCTTCTCGGCGCCAAGTCCCGCAAGGACCTCGCCAAGATCGTCCGCGGCCTCTCGGAGCAGGCC
CTCGTCGACCGCACGCCGGGCGTGTTAACACTAATCTTGACGTGCATGGTTCCGTTGGCAGCCGAGTCCCGCGGCTGTGA
CGAGCGGGGCGTCTGGTGGAGCTGGCAAGTCCTTGAGTGCATGGATAAGGTCGTTATCTAGTTGCATGCATGTAGCTAGT
GGGTTAGTGGCCAGGTCATGTGGTGTGGTGCATGCGTGCGTGGAGTTAGTGGCCGGTGTGTTGGCTGGATGGTGTGCGTG
CATCTGGGTATAAAAGGCCCTCTGTTGTACTGCTCGTGTGTGGTGTGAGTTCGAGTTCGTGCTCGAGGAAAAAGCCGTTC
GTGCAGCAGACGTATGTGCGCCGTAAAAACACCACCGTGCCCCGTGTCTTCTTTTTCTTCTACCTTCGTTCGTGCGAGAG
CGAGAGAGAGCGAGGGAGCTGGGCACCGACGCAAAGAGCAAGCTAGGGCTTGGCGCCAACAGGGCGGCGGGCCGCGCGTC
TCCTTCGCGTGCGGCGTGTGGCACGACGAGACCCGGAAGCTCAGGCCATCCTTCCGCGAAGCCGCCGCCCAGTCCTACAA
GGCGGAAACCGGCGCCGTCGACTTCCGTGAAAAGGTCGGTGCCA-CAAATCTCTCTTCTTCCTTGCTCA----TCTCATG
TTTTTTACACACAGTGGTAATTATTTCTA---------------------------------------------------
--------------------------------------------------------------------------------
------------------AGTTCTAACCAATCACGTCTGGGTGTTCGGCTCTGCAG-CAGGAGAAGCCGTGAAGCAGATC
AACGCCTGGGCGGCGGCGGCGACGAACAACCTCATCGACTCGGTGCTCACCGAGCAGCAGGTGTCCACTGAGACGGACGT
CGTCGTGGCCAACGCCGTCTACTTCAAGGCCACGTGGGACTCCCCCTTCCGCGAGCGCAACACCGA-GGACGACAAGTTC
TACCGCCTCGACGGCACCGCCTTTGATGTCGCCTTCATGCAGAGCGGCAAGA-AGCAGTACATCGCCTGCCACCAAGGGT
TCAAGGTGCTCAAGCTCGACTACAGGCAAGGACACGTGTGGTCATCGCCGCCGGCGTCGTTCTCCATGTGCGTCTTCCTC
CCG------GACGACCGCGACGGGCTGCAAGGCCTGGTCCAGAGGATCGCGTCCAGCCCGGACTTCATCCGCGCACACCT
TCCGACGAGACTCGTCTCCGTCGGCGACTTCAAGCTGCCCAGATTCAAGCTTGCCTTTTCGGCCGACATGTCCGACATTC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TCCGGCGGTTGGGACTCCATGTGGCG------------GGAGCCGACATGTCCAAC
ATGGTGGAGGACGACGGCACCGGCAGGCCGCTGGCTCTGAGCGGTATCGTCCACAAGGCTGTTATTGAGGTGAACGAGGA
TGGTACCGAGGCGGCGGCCGTGACCGCCGGCCTAATGTGCGGCTGCGCCCCACCACCGAAGACACCGCCGGTTCTCGTGG
ATTTCGTTGCTGACCATCCCTTTGCCTTCTTTGTAATCGAGGAGGAGTCCGGCGCCATCGTCTTCGCTGGGAACATCCTT
GAACCCTCTCCGTCGATTCCTGGAGAGAACCTTCGTCGCCGTGAGTCCGTACGTCGTGCTCCTAACT---TCGTCGGGAG
GAGGCCCGAGCATCCATGGACTTTGGGTGCAATCGATGAGAAACAGCTGCT-----------------------------
--------------------------------------------------------------------------------
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--CGGGGTATACTCAAGGGGTATGGATGGCCGTCCATTTGTGCAGCATGAGGCTGCTTCATGTAATCCTATTCTTCTTTT
CGCTTGTGTCTGCCTAGTTGTGGCCTTTTTCTTTCAACTTGTACGTCTTTTGGTGATGTAAAATCTTAATGGCTTTTTAA
TGATAGAAGTCTGCCTGCATCAAAGAGGCCAGGAGAATTAATGCAAGTATTAAATCATGTTTGGTTGTACTTTCTATCTG
ACTGAGGTAGCTCTGCTTCTCAGCTTTGCCAATTTTTTTACATGAATCAATGCTCAAAAATGCTAGACTTATGTAAACCT
TTTTTTACCCTGATGAGAGTGCCACACGTGTGGTACGAACATATGGCAACTCCAAATATTTTTTATGGCAAGTTTAGTGA
CGTGAGTATGACAACTTTAGTTGGGGGAAAATATCTGGTACTCCCATCCTTGGGGTACTTCCGGTGCTCCAAGTTTAAAA
ACAAATCTTCAATGTTTCAAAAAATTCTGGAAAAAAATATGAATGTTCGCAAGGGATGTGACTCCAACCCCTAGAAATTT
CAGGTCCAAACTCAAAATGTACATTGAGGAACAAAAATGTAAAATCCAGATGTGAATAGTGTCAATGTTCATTTTGTCTT
TTTGTTTACACTATTCGTACCAGATTTCACATTTTTTTTTCTTAATGTGCATTTCAAGTTTGGACTTGAACTTTTTAGGG
GTTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------TAGCTACATTCTTTGCGA
ACATTCACATTTTTTTC-AGAAATTTTTAAAACATTTATGAATGTTATTTTTAAACTTGGAGCACCGGGAGGACCCCAAG
AACGGGAGTACCTTATACTTTCCCCTTTAGTTGGCAAGTATGGTAACTTTCTTTTTGAAGGGCAATTTTTTTGGTTTGTT
TTTCTTTTTTGGATTGCAACTTTAGTTGTAGAAAACATCAGGGCCGAAGTGCTTTGTGCACACGTGTGGCACTTATTATT
TTGTTTTCTTAGCTTATGTAAACTTTTTACCGTATCCTACGAAATTTCCCTTCACCCTAACTAAACATCACGGTGGTTCC
CCGACCGAAACCAAGCTGTAACCGGATCAGGGTGAGTCCCATGGTCCACTAATGCCCAATTAAACACTCACAAGTCATCA
>chr3A_1
TCCAGCAGCTGCTCGCCCTTCTCGGCGCCAAGTCCCGCAAGGACCTAGCCAAGATCGTCCGCGGCCTGGCGGAGCAGGCC
CTCGCCGACCGCACGCTGGGC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GGTGAGCCGCGCGTC
TCCTTCGCGTGCGGCATGTGGCACGACGAGACCCGGAAGCTCAGGCCATCCTTGCGCGAAGCCGCCGCCCAGTTCTACAA
GGCGGAAACCGGCGCCGTCAACTTCCATGAAAAGGTCGGTGCCT---------TCTTCTTCCTATGCCATGTTT-----T
TTTCTTACACGCAGTGGTAACTATTTATTGGGAATGTCTAGGGCACATCTGCCCTAATTATTGCGCATCTAAGTGATTTA
ATTAAGCATCAAAAGTAAAAAAAAATATCCACACGAATCTCTATGTAAGATCAATGATATAGAACTTAGATGTGCTTTAG
TAAAACTGTTATTTTCTGAGTTCTATCCAATCACGCGTGGGTGTTCGACGCTGCAGCCAGGAGAAGCCGTGAAGCAGATC
AACGCCTGGGCGGCGGCGGCGACGAACAACCTCATCGACTCGGTGCTCACCGAGCAGCAGGTGTCCACCGAGACGGATGT
CATCGTCGCCAACACCGTCTACTTCAAGGCCATGTGGGACTCCCCCTTCAGCGGCCACAACACCGA-GGACGACAAGTTC
TACCGCCTCGACGGCACCGCCTTTGATGTCGCCTTCATGC-GAGCGGCAAGG-AGCAGTACATCGCCTGCCACCAAGGGT
TCAAGGTGCTCAAGCTCGACTACAGGCAAGGGCACGTGTGGTCTTCGCCGCCGGCGTCCTTCTCCATGTGCATCTTCCTC
CCAGTCCCAGACGAGCGCGACGGGCTCCGAGGCCTTGTCCAGAGGATCGCGTCCAGCCCGAACTTCATCCGCGCGCACCT
TCCGACGAGCCTCGTCTCGGTGGGCGACTTCAAGCTGCCTAGATTCAAGCTCACCTTTTCGGCCGACATATCTGGCATTC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TCCAGCGGTTGGGACTCCATATGGCG------------GAAGCCGACATGTCCAAC
ATGATGGAGGACGACGGCACTGGCAGGCCGTTGGCTCTGAACGGGGTCGTCCACAAGGCTGTCATCGAAGTGAACGAGGA
CGGTACCGAGGCGGCGGCCGTCACCGCCGATCTAATGTGCGGCTGCGGTCCTCCACCGAAAACACCGCCGGTTCTCGTGG
ATTTCGTCGCTGACCATCCGTTTGCCTTCTTTGTAATCGAGGAGGAGTCGGGCGCCATCGTCTTCGCTGGGAACGTCCTT
GAACCCTCTCGGTCGATTCCTGGAGAGAATCTTCGTTGCCGTGAGTCCGTACGTCGTGCTCCTAACT---TCGTCGGGAG
GAGGCCCGAGCATCCATGGACTTTGGGTG---------AGAAACAACCGCTCGGGATGTTGGGTCTAACCCTAGCTAGCT
CTCTAGGGACGGAGGTAGAAGAAGAAGTGAGCACACAGAGATTTTGTGACGACGAACGCCTCGCTGCCAAACAACGATTT
TTTCCAGCTCGAACTGTTACAACTGACTCGATATACAGCCGTATTTGTAGCTAACCGGAACGTAGCGCCCACGCACGCCG
CGGTTACCCCACGTACGCTTCCTGGCGATCCGGTCATCCAACGTGAGCTGCCCACTCCTCCGCTTGACCTGGATGCCATC
ACGCGCCCGCCGTTGTTACACAACGGAGCTAGCTACAAACCTGGCTTGACTCTAATCTATCCTCGAACGTGGCCAAACCA
ACGTCCGGACTCGATCTAGACCTTGACGCAAACACAAGCACGTACTCATGCACCTACACGCCCCATGCATGCGCGCACGC
ACACACAATACACACGTATGCCCATACGTACACCTTGCCACGGCCGCGACACGGCAACGGACCGGCGACTGGCTCGATCA
TCACGCACATACGCACATGATCACCACCCATACCATGGCTTATTCCAACACTCTCCTCCTAAGCCACGAACTACAGGAAG
GCTGGCCCCTCGGCGTCGATGTCGGTGAGGAGAGCCTGCTCGTTCTTCTCCTTCTTCGGCTTCGTGCACTCCCTCGAGAA
GTGGCCGGGCACGCCGCAATTGTAGCACCGGCCGCGGCGTCTTCCTCCTCCTGACGCCACGCTCCTGCCGTCGTCGTCGT
CCCGTGTGCCGCCCTGCTGCCGCTCCCGCGCCCGCCACTGCGCTGCCGTGAACATCAGCTCGCCGCCTGCCCGCTCGCCG
CCCGCCTGCCCACGCCGACGCAGCCGCTCGTCGAACGCCTTCAGGCGTCCCAGCGCGTCCTCGAACATCAGCGTCGAGAG
GTCGCAAAACTGCTCCATCCCGGCGACCGCCGCGTACAAGCGATCCGGGACGCAGTCCAGTAGCTTCTTCACCATCGCCG
TGTCGACGAGGGTCGATCCCAGCCCGGCGTAGCGCGCCGCCATGCCACTGATCTTGCCCGCGAAGGCGTCCAGCGACTCA
CCGCCGTCCATCCGCAAGAGCTCGAACTCGCTGCGCAACGTGCCCAGCCGCGCCGCCCTGACGCGATCGGCCCCGACGAA
CCGGGCCTTGAGGCTGCTCCACACCTCCGCCGCGGTCTTCTTCGACGATACCTGCAGCAGCAGGTCCTCGGTGAGTGCGC
CGAGCAAGTAGGCGCGCGGGGGCTTGTCCTTCTTAGCGACGACGGCCGCCGCCGCGTCCTCTGGCACGACCACCGCCTCC
CACAGCCCGGCCGCGTCCAGGTTGGCCTCTACCTTGATTGCCCACGTGGTGTAATTGTCACCAATGAGCATGGGAACGGG
CGTCGGTAGCGAGCTCCCCGACCCGCCGGCGTACGGCACGATCGACATCGCCGTCGATCACCTCCCGCAACGAGGCTCTG
AATACCAAATGTTGGGTCTAACCCTAGCTAGCTCTCTAGGGACGGAGGTAGAAGAAGTGAGCACACAGAGATTTTGTGGC
GACGAACGCCTCGCTGCCAAACAACGATTTTTTCCAGCTCGAACTGTTACAACTGACTCGATATACAGCCGTATTTGTAG
CTAACCGGAACATAGCGCCCACGCACGCCGCGGTCACCCCACGTACGCTTCCTGGCGATCCGGTCATCCAACGTGAGCTG
CCCACTCCTCCGCTTGACCTGGATGCCATCACGCGCCCGCCGTTGTTACACAACGGAGCTAGCTACAAACCTGGCTTGAC
TCTAATCTATCCTCGAACGTGGCCAAACCAACGTCCGGACTCGATCTAGACCTTGACGCAAACACAAGCACGTACTCGTG
CACCTACACGCCCCATGCATGCGCGCGCACGCACACACGATACACACGTACGCCCATACGTACACCTTGCCACGGCCACG
ACACGGCAACGGACCGGCGACTGGCTCAATCATCGCGCACATACGCACATGATCACCACCCATACCGTGGCTTATTCCAA
CACGGGATATACTCAAGGGATATGGATGGCCGTCCATTTGTGCGTCAAGAGGCTGCTTCGTGTAATCCTGTTCTTCTTTT
CTGTTGTGTCTGCCTAGTCGTGGCCTTTTTCTTTCAACTTGTACGTCTTTTGGTGATGTAAATCTGAATAGGC-------
--------------------------------------------------------------------------------
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>chr3B_542
--------------------------------------------------------------------------------
-----------------GGGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GGCGGGCCGCGCGTC
TCCTTCGCGTGCGGCGTGTGGCACGACGAGACCCGGAAGCTCAGGCCATCCTTCCGCGAAGCCGCCGCCCAGTCCTACAA
GGCGGAAACCCGCGCCGTCGACTTCCACGGAAAGGTCGGTGTGTGCAAATCTCTCTTCTTCCTTGCTCA----T-----G
TTTTTAACACGCAGATTTGATTATTTCTA---------------------------------------------------
--------------------------------------------------------------------------------
------------------ACCAATT----------------------ACGCTGCAGCCAGGAGAAGCCGTGAAGCAGATC
AACGCCTGGGCGGCGGCGGCGACGAACAACCTCATCGACTCGGTGCTCACCGAGCAGCAGGTGTCCACCGAGACGGACGT
CGTCGTCGCCAACGCCGTCTACTTCAAGGCCACGTGGCGCTCCCCCTTCCGCGAGCACTACACCGA-GGACGACAAGTTC
TACCGTCTCGACGGCACCACCTTGGACGTCGCCTTCATGCAGAGCGGCAAGA-AGCAGTACATTGCCTGCCACCAAGGCT
TCAAGGTGCTCAAGCTCGACTACAGGCAAGGGCACGTGTGGTCTTCGCCGCCGGCGTCGTTCTCCATGTGCATCTTCCTC
CCG------GACGAGCGCGACGGGCTCCGGGGCTTGGTCCAGAGGATGGCGTCCAGCCCGAACTTCATGCGCGCGCACCT
TCCGACGAGTCTCGTCTCGGTCGGCGACTTCAAGCTGCCCAGATTCAAGCTCACCTTTTCGGCCGACATGTCTGGCATTC
TCAGTGGCGGAGACAGGGGGGACCAGCACGGGCCCTGGCCCCCCCTAATACCAGGATTTTGCATGTAATTTGGTATGAAC
AGAGGCAAAATTAGTACTAATTTGCTGCTAAATATCTATTTTTCAACACTTTGGCCCTCTCCAACCTGATTTAATAGCAC
TTGGCCCTCCTGATACAAAATTTCTCCGGCGGTTAGGACTCCGTATGGCG------------GAAGCCGACATGTCCAAC
ATGGTGGAGGACGACGGCACCGGTAGGCCATTGGGTCTGAGCGGTATCGTCCACAAGGCTATCATCGAGGTGAACGAGGA
CGGTACCGAGGCGGCGGCCGTCACCGCCGGTATAATGTGCGGCTGCGGTCCTCCACCGAAAACACCGCCGGTTCTCGTGG
ATCTCGTCGCTGACCATCCCTTTGCCTTCTTTGTAATTGAGGAGGAGTCGGGTGCCGTCATCTTCGCTGGGAACGTCCTT
GAACCCTCTCCGTCGATTCCTGGAGAGAATCTTCGTCGCCGTGAGTCCGTACATCGTGCTCCTAACTTCGTCGTCGGGAG
GAGGCCCGAGCATCCATGGACTTTGGGTGCAATCCATGAGAAACAGCCGCT-----------------------------
--------------------------------------------------------------------------------
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--CGGGGTATACTCAAGGGGTATGGATGGCCGTCCATTTGTGCAGCATGAGGCTGCTTCATGTAATCGTATTCTTCTTTT
CGCTTGTGTCTGCCTGGTTGTGGCATTTTTCTTTCAACTTGTACGTCTTTTGGTGATGTAAATCTGAATAGGC-------
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>chr3D_778
--------------------------------------------------------------------------------
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---------------------------------------------------TGCAGCCAGGAGAAGCCGTGAAGCGGATC
AACGCGTGGGCGGCGGCGGCGACGAACGACCTCATCGACTCGATCCTCGCCGACGGGCAAGTGTCCGCCGAGACCGACGT
CGTCGTCGCCAACGCCGTCTACTTCAAGGGCAGGTGGCACGTGCCCTTCCGCGAGGAGAACACCGCTGGACGACAAGTTC
CGCCGCCTCAACGGCAGCACCTTCCACGTCCCCTTCATGC-GGGGTTTTGGGCAGCAGTACATCGCCTGCCACAGAGGGT
TTAAGGTGCTCAAGCTCCGGTACAAGGAAGGACGCAAGCGGCCTTCGC---------CCTTCTCGATGTGCATCTTCCTC
CCG------GACGCCCGTGACGGGCTCCATGCCCTTGTTGAGATGATGGCGTCGTGCCCGGAGTTCATCGGCTCACACCT
TCCGACGAGCCTTGTCCCGGTCGGCAAGCTCAGGCTGCCCAGATTCAAGCTGGCCTTCTCGGCAGACATGTCGGGCATTC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TCCGGGAGTTGGGACTCGAGGTGGCGTTCGACGAAAACGAAGCAGACCTGTCCGAC
ATGGTGGAGGACGACGGCACCGGCAGGCCGTTGGGTCTGAGCGGGATCATCCACAAGGCGGTCATCGAGGTGAACGAGGA
CGA-ACCAAGGCCGCAGCCGTCACCGCGTCTATGATGGTTGGCAAAAGCGCGCCCAAGCAACCGCGGCCGGTTCCTGTGG
ATTTCGT---------TCCGTTTGCCTTCATTGTAATCGAGGAGAAGTCGGGCGCCATCGTCTTTGCGCGGAACGTCCTT
GAACCCTCGCCATCGA----------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr3D_2109
--------------------------------------------------------------------------------
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---------------------TGGGGGCAAATATCTGGTACTCCCATCCTTAGAGTACTCCCGGTGCTTCAAGTTCAAAA
ACAAATCTTAAATGTTTCCAAATAAATGACAAAAAATGG-GAATGTTCGCAAGGAATGTGACTACAACCCCTAGAAATTT
CAGGTCCAAACTCGAAACGTACATTGAGAAACAAAAATGTGAAATCCAGATGTAAATAGTGTCAATGTTGATTTTGTCTT
TTTC-TTACACTATTCATGTCAGATTTCACATTTTTGTTTCTTGATGTACATTTCAAGTTTGGACCTGAAATTTTTAGGG
GTTGTAGTTACATTCCCTGCGAACATTTGTCTTTTTTTCCAGAATTATTTGAAATTTTTCTAAATGTTTTTTAAAATTTG
GAGCACCGGGAGTACCCCAAGGATGGGAGTACCTGATACTTTCCCCATCACCTGGGTGTCTCCCAAAGGTCGTTGCATCT
TCTACTATCAAGGGCATAAAAAGCATCTCCACCCCCTCCATGCCTTCACATCGAAGCCAATAGTCTCATGCACTGATTTT
CCAACATTCGTGCATGGTGATGAGCTTCACACATGTCACATTTCTTCCGAATAAATTCATATTGAAATAATAAATTCATG
AATTAGGTTTTCGCCCGGTTTATAGATAAAGCCAACCACCACAAATGCCATACAAAGTTTGTCAATTACAGCAAGCAAAA
CAAGATTTTCTAGGGAGAACAAGTGCGAGGTTTGACATTAGTGTGTTCGGTTCCATTTGCTTAGCATTTCTGACTTCTTA
CCGTCTTGAAAGTCAAAATGCATGTGCCATTTACCTAGGGGCAGGCATGCGGTCTAGCAGTAACTGCGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATGACATTAGAAATCTCATGAATACAAAAAT
ACATGGATCAGTGATATAATATGTTTGGTTTCAAATAAAACCCTCCATGTGGTAAACAAAATCGTCCGCATACATCACCT
GGGGGGAAATATCTGGTACTCCCATCCTTGGAGTACTCCCGGTGCTCCAAGTTCAAAAATAAAATCTTAAATGTTTCCAA
AAAATTCGACAAAAAATGGGAATGTTCGCAACGAATGTGACTAGAACCCCTAGAAATTTCAGGTCCAAACTCGAAACGTA
CATTGAGACACAAAAATGTGAAATCCGGATGTAAATAGTGTCAATGTTGATTTTGTCTTTTTCTTACACTATTCATGTCA
GATTTCACATTTTTGTTTCTTGATGTACATTTCAAGTTTGGACCTGAAATTTTTAGGGGTTATAGTTACATTCCGTGCGA
ACATTCATCTTTTTTTCCAGAATTATTTGAAATTTTTCTAAATGTT-TTTTAAAAGTTGGAGCACCGGGAGTACCCCAAG
GATGGGAGTACCTGATACTTTCCCC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>SNPs
----------------------------------------------S--------------------SS-----------
----S-----------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------
--------------------------------------------------------------------------------
--------------------------S----------------S------------------------------SSSSS-
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S---------SS----------S-S------------------------------
--------------------------------------------------------------------S-----------
------S-------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-------------------------------------------S---------------------------S--------
--------------------------S-----------------------------------------------------
---------S--------S--------------------------------S--------------------S-S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
------------------------------S-------------------------------S--S--------------
S--------------------S--------S----------------S---S--------S-------------------
-------S-----------------------------------------S------------------------S-----
-----------------------------S--------------------------------------------------
----------------------------------S------------S--------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------SSSSS-SS---SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS------S-----------------------S-S-----S--------S------S----
---------S--------S---S-SSSSSS------SSSS--------------S--------S----------------
-------------S---S----------S-----------S------------S---------------S----------
---SS-----------S-SS----------------S------S----S----------------S----S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------S-------SS-----
-------SS-------------S-S---S---SS---S-S------S----S---S---------------S--------
S-S----------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_442
--------------------------------------------------------------------------------
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----------------------GTAAAAACACCACCGTGCCC--------------------------------------
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>reverse_4255
--------------------------------------------------------------------------------
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--------------CTGCATCAAAGAGGCCAGGA----------------------------------------------
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