>input_sequence_67676
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATGAGCAGTCCACCGCAGTACGCAGATGTCTCCTCCCTCCTGGCAGCTGCGGACGTCCACCA---
GCCGCCGCTCGACGGCCGCGTGGCCATCGTGACCGGTGGCGCTGGCGGCATTGGCGCCGCTGTCACCGCGCACCTCGCAT
CCCTCGGCGCTCGCGTCGTCGTCGGCTACATCGGCGACTCGGCACCCGCGGACCAGCTGGTCGCATCCCTCAACGCGGCC
GCCGCAGGCAGCTCCGCGCCTCGCGCGGTCGCGGTGTGCGCCGACGTGTCGGACCCCGTGCAGGTGGAGCGTCTGTTCGA
CGCGGCGCAGGCGGCGTTCGGGCGCGACCTCCACATCGTGGTGGTGGCCGCCGGGTTCCAGGACGCCGCGTACCCGGCCA
TCGCGGACACCGAGCCGGAGCAGTGGGACCGCGCCTTCGGAGTCAACGCGCGCGGCACGTTCCTGTGCTGCCGGCAGGCG
GCCCGGCGGCTCGTCAGAGGCGGCGGCGGGCGGATAGTCACCTTTTCGTCGTCGAACGTCGCGTCGCTCCGGCCAGGGTA
TGGCGCGTACGTGGCGACCAAGGCAGCCGTGGAGGCCATGACCAAGGTGCTGGCCAAGGAGCTCGCCGGGACGGGCATCA
CGGCCAACAGCGTGGCGCCGGGGCCGGTCGCCACGCCCATGTTCTACGCCGGGAAGTCCGAGGAGCGCGTGAGGGCCGTC
GCCAGCGAGTGCCCCATGAAGCGCATCGGCGAGCCAGCGGACGTGGCGCCGGTGGTCGGCTTTCTCTGTAGTGACGCCGC
CGGGTGGATTAACGGCCAGGTGATTCGGGTCAATGGTGGGTACGTGTAG-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr7D_1_TraesCS7D01G151600
TTGATTTTCCATGATAAAAAAATGCTTTTTATCGACTTATAATGTTGTTTTAAGCGAGCAAAACATTGCACATCCGGTTT
CTGCATAATTATGATAAGCATA-TCTGAAAACATTCACAGAGATCGAGAATACACCACCAAAATGAAGTGTGAAGAGACA
AAGAGCAATGCCAGGTTAGGTGGGAGCGTGTGCATTATAGAGATTATGCCGTCATCGATGTTAGGTTAAATATGCTTTGG
CTAACTGCTCGTACAACTGTTGATAGGTT--GTTCTTTGT--GGTGGAATTGTGAACTGTGAACCGAACCTAGTTCAGAT
GGTTAGGTTTATTGTGGTGGAACAACCTATTTTTTGGCGATGATCGTTCGAGGGCGAGATATTCCCGTCGACTAAGAATA
TGTCTGTGGTGACTTCG----TCAATCTCAAGATGATGTACCGGCTCAGCCTCTCGATGGTGTTCATAGGGGTATGGTGT
GTGTTGATATGGATGAGTGTAGTTGTATATGTATAAACGTCTATATTTGTACTGTGTTAAAATAAGCTGTTAGGTTAGTT
GTTTGATAT----------------------------------------------GATTGTAATTTTGTGCGTGTATTAT
ATGCAACCATATGAGTGGATTAATTACTGCCGGCAACACATTTACAATAAGGAGTAATGCTACACGCACGGGGACTTCAC
GGGGTTTAGGGGCTAATTGAAGATTAATGGCTGTGATTTAGTTAATTAGGACGGGCCCCACCACTTAGAATTGGGGCGGC
GGGAGGGGGGAGCAATTAGAGTATAGCAGGTCCTCCACCCGGTGAAAGCCCGTTGAAACTTGCCCGTGAATGTAAGTATT
ATCGTACAATAAGTCACCTAGTATTTTCTCTCGACAACATTAATTAATTCAAAAATTTCCGCAAAGAAAAATATTAATTC
AAATTTGTTCCACTTGCACCTGCCACGCTTACCCACACATGAGTTTATAATCGGAGAGATGGTGCAGCAGCAGCTTCGCA
TGCCGTGATCCAACAATGAGCAGTCCACCGCAGTACGCAGATGTCTCCTCCCTCCTGGCAGCTGCGGACGTCCACCA---
GCCGCCGCTCGACGGCCGCGTGGCCATCGTGACCGGTGGCGCTGGCGGCATTGGCGCCGCTGTCACCGCGCACCTCGCAT
CCCTCGGCGCTCGCGTCGTCGTCGGCTACATCGGCGACTCGGCACCCGCGGACCAGCTGGTCGCATCCCTCAACGCGGCC
GCCGCAGGCAGCTCCGCGCCTCGCGCGGTCGCGGTGTGCGCCGACGTGTCGGACCCCGTGCAGGTGGAGCGTCTGTTCGA
CGCGGCGCAGGCGGCGTTCGGGCGCGACCTCCACATCGTGGTGGTGGCCGCCGGGTTCCAGGACGCCGCGTACCCGGCCA
TCGCGGACACCGAGCCGGAGCAGTGGGACCGCGCCTTCGGAGTCAACGCGCGCGGCACGTTCCTGTGCTGCCGGCAGGCG
GCCCGGCGGCTCGTCAGAGGCGGCGGCGGGCGGATAGTCACCTTTTCGTCGTCGAACGTCGCGTCGCTCCGGCCAGGGTA
TGGCGCGTACGTGGCGACCAAGGCAGCCGTGGAGGCCATGACCAAGGTGCTGGCCAAGGAGCTCGCCGGGACGGGCATCA
CGGCCAACAGCGTGGCGCCGGGGCCGGTCGCCACGCCCATGTTCTACGCCGGGAAGTCCGAGGAGCGCGTGAGGGCCGTC
GCCAGCGAGTGCCCCATGAAGCGCATCGGCGAGCCAGCGGACGTGGCGCCGGTGGTCGGCTTTCTCTGTAGTGACGCCGC
CGGGTGGATTAACGGCCAGGTGATTCGGGTCAATGGTGGGTACGTGTAGTTTGTGCCGTTTGCTCATATCCGATGTGTGC
GTGTAACTCGATTACAAACGAGAAGGTCCACTCGGTCGATCTCCACGTTGTCACGTCGATTTACATGAATGAACAAGCAC
AGTTTTTTCTTAAATAGCGGAACACAATCTTTTTCATTGGCTTGAAATGAAGCATCAAGATGATACAAATACAATAAACA
CACACTCGATATGTGCATTGTTAGGATCAAAGCTATGCGTAGACGAGAAAAAAAAAACCCCCAAAAGCATCAACTC---C
ATGATTGACAAATTACAACAATGGTCATATCCGCGCCAAGCATCTCATGACAATACACGAGTGACGAGATTCTTCAACAA
CAACGTCTTCAGTAAGGGAGCGGCGCTCAAACGAATCCATCACCGGATTCAACGACACAAGATCAGAATCTAAA----TT
TTCACATTGATTAACCAGTCCGAATATATCCGAGCAATGCCTTCAACAAAATAACGACGTAAAAATATCGTCATTTAGAA
TTAGAAGTCAAAGAAAGTAATGTCATTTGAGTTGAAATTGTAGAAGGGTGAGTTGTTTGAGTTTGAATGAAATAACAAAA
ACATGGTCTTCTATTTCTCACCATCTCTAAGTGTAAGCGTAGAGGGGGTAGCGCAATCAGTTAATTTTGGCAATCTAGTT
CTTACAAGCCTCAGCTCCAACTAGTAGATATATATGTTAGGTTTTGAGAGTTTGCTAACTCTCTTCTACATGAGAGTTAG
CTATGTAACATCTAAGTTGTCCACCACATGATCAAGGCGTATTTTTTTTGAGAATCATGCGCTGAAAATATTTGGTGCAA
ACAGTTTTTTTTATTGAGGGAAAGCCTTCATGGTGCATTTTATTGATGCTTCAAAATAGTTATATCGTTTATTACATCCG
AATTAATAAAGCTAGGAGGATTATCACACTAGTAGAAAAAGAGGCTTCCATACGCCCCCATTAGTCCCCAAAACAATCGA
ACCGCGACAAAAGGGG
>chr7B_1
TTGATTTTCCGTGATAAAAAAAATGCTTTTATTGGCTTATAATGTTGTTTTAAGCGAGCAAAAC----------------
---------TATGATACGCAACCTCCGAAGACATTCACAAAGATCGAGGAATGCCTG-----------------------
------------AGGTTAGGTGGGAGCGTGTGCATTATGGAGATTATGCTGTCATCGATGTTGGGTAAAATATGCTT-GG
CTAACTGCTCTTACGACTGTTGGTAGGTTAGGTTCTTTGTGCGGTGGAATTCTGAACTATGAAACGAACCCAGTTCAGAT
AGTTGGGTTCATTATGGTGTAACAACCCATTTTTCGGCGATGTTCGTTCAGGGATGAGAAATTCCCATCGACTATGAAGA
CGTTTGTGGTGATCGATTTTATCGATCTCAAGATGATGTGCCAGCTCAGCCTCTTGATGGAGTTTATAAGGGTATGACGT
GTGTTGATATGGATGAGTTATGTGCGC-ATGTATAAACGTCTGCATTTGTACTGTGTTAAAATAAGCTCTTAGGTTAGTT
GTTTGATATAAATGCTACACATGTACCATGCAAAAGAAAGTTAGCTGTTTAATAGGATTGTAATTTTGTGTGTGTATTAC
CTGCAACCATATGACTGGATTAATTACTGCAGACAACATATTTACAATAAATCACCTA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGTATTTTCTCTCGACAACATTAATTAA----AAAAGTTCCGC-AAAAAAAACATGATTTC
GAATTTGTTCCACTTGCACCTGCCACGCTTACCCACACATGAGTTTATAATCGGAGAGATGGCGCAGCAGTAGCTTCGCA
TGCCGTGATCCA---ATGAGCAGTCCACCGCAGTACGCAGATGTCTCCTCCCTCCTGGCAGCTGCGGGTGGCCACCAGCT
GCCGCCGCTCGACGGCCGCGTGGCCATCGTGACCGGTGGCGCTGGCGGCATTGGCGCCGAAGTCACCGCGCACCTCGCAT
CCCTCGGCGCTCGCATCGTCGTCGGCTACATCGGCGACTCGGCACCCGCGGACCAGCTGGTCGCATCCCTCAACGCGGCC
---GCAGGCAGCTCCGGGCCACGTGCGGTCGCGGTGTGTGCCGACGTGTCGGACCCTGTGCAGGTGGAGCGTCTGTTCGA
CGCGGCGCAGGCGGCGTTCGGGCGCGACCTCCAGATCGTGGTGGCGGCCGCCGGGTTCCAGGACGCGGCGTACCCAGCCA
TCGCGGACACCGAGCCGGAGCAGTGGGATCGCGCCTTCGGAGTGAATGCGCGCGGCACGTTCCTGTGCTGCCGGCAGGCT
GCCCGGCGGCTCGTCAGAGGCGGCGGCCGGCGGATAGTCACCTTTTCTTCGTCGAACGTTGCGTCGCTCCGGCCAGGGTA
TGGCGCGTACGTGGCGACGAAGGCGGCCGTGGAGGCCATGACCAAGGTGCTGGCCAAGGAGCTCGCCGGAACTGGCATCA
CGGCCAACAGCGTGGCGCCGGGGCCGGTCGCCACGCCCATGTTCTACGCCGGGAAGTCCGAGGAGCGCGTGAGGGTCGTC
GCCAACGAGTGCCCCATGAAGCGCATCGGCGAGCCAGCGGACGTGGCGCCGGTGGTCGGCTTTCTCTGTAGTGACGCCGC
CGGGTGGATTAATGGCCAGGTGATTCGGGTCAATGGTGGGTACGTGTAGTTTGTGCCTTTTGCTCATATCCGATGT--GC
GTGTAACTCGATTACAAATGAGAAGATCCACTCGGTCGATCTCCACGTTGTCACGTCGATTTACATGAATGAACAAGCAC
GGTTTTTTCTTAAATAGCAGCACACAATCTTTT-CACTGGTTTAAAATGAAGCACAATAG-GATACGAACACAATAAAAA
CACAATTGACCTTTGCATAGTTAGAATGCATACAACCAACATCAACGCATGCACATAAAAAACACATGAGCGTCAAATGC
ACGATTTACAAATTACAACAATGGTCATATCCGCGCCAATCATCTCATGACACTACAAAAGTGACAAGATTCTTCTTCAA
CAACGCCTTCAGTAAAGGAGTGACGCTCAAACCACTCCGGCACCGTACTCAACCACACAAGATCAGAATCTAGCTTGGTT
TTCACCCTGATTAACCAGTCCGAACATATTCGAGCAATGCCTTCAACACAGTAACAGCATAAAAACATCGTCATC-----
-TAGAAGTCAAAGAAAGTAATGTCATTCGAGTTGAAATTGTAGAAGTGTGAGTTGTTTGAGTTTGAATAAAATAACAAAA
ACATGGTGTTCTATTTTCGACCATTTTTAAGTGTAAGCTTAGAGGGGGTAGCGCAGTCGGTTAATTTTGGCAATCTTGTT
CTTACAAGCCCCAGCTCCAGCTAGTAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>SNPs
----------S-----------SSSS------S-S-----------------------------SSSSSSSSSSSSSSSS
SSSSSSSSS-------S---SS---S---S---------S--------S-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS--------------------------S----------S------------S---S----------S--
----------S---S-------S----------------------------S------S----S------S---------
S---S----S---S-----S-------S------S-------S------SS--SS----S------S-------S---S-
S--S--------SSSSS------S---------------S--S-----------S-----S---S---S-------SS--
------------------SSS--SSSSS--------------SS------------------------S-----------
----------------------------------------------------------------------S--------S
S-------------S---------------S-S-----S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS----------------------------SSSS----S------S--S-----S--S-S---
S-------------------------------------------------------------S-------S---------
------------SSS----------------------------------------------------SS-S---------
-----------------------------------------------------------SS-------------------
--------------S-----------------------------------------------------------------
SSS-------------S---S--S--------------S-----------------S-----------------------
---------------------------------S----------S---------------------S--------S----
----------------------------S--------------S--S--------------------------------S
---------------------------S-------------------S-----------S--------------------
------------------S-----S--------------------------------------------S--S-------
---------------------------------------------------------------------------S----
----S---------------------------------------------------------------------------
------------S--------------------------------------------S------------------SS--
------------------S------S------------------------------------------------------
S-----------------S-S------------S--S---S--S----------SS-SSSS-----S--S--------S-
----S-S--SS-S-----S-----S--SS-SS-S-SSSSS-SSSSS-S-SSS-S-S-SSSSSS-S-SS-S-SS-SS----
-S----S--------------------------------S------------S----SS------S---------SS---
-----S---------S----S-S---------S-S---SS-----S-S-----S------------------SS------
-----SS-----------------S----S------------------S-S----SS-S------S--------SSSSSS
S--------------------------S------------------S---------------------S-----------
-------S--------SSS-----S-S-----------S----------------S--S-----------------S---
----------S--------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_799
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ACCACTTAGAATTGGGGCGG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>reverse_2519
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GTAGAGGGGGTAGCGCAATC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
