>input_sequence_67661
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------------------------------------------------------------ATGAAGAGGAAAAAGAAGGC
GGCGGAACCCGCGGCCAAGAGGCGCCGGCC------GCGGGGCCGGGATGGCGAGCTCG------------------TCG
GCGACGGGGATCTCATCAGCAAACTCCCCGATGACATCCTCGGCACCATCATCTCCCTCCTCCCCACCAAAGACGGCGCG
CGCACGCCGGCCATCTCTCGCAGATGGCGTCCCCTCTGGCGCTCCTCGCCTCTCAACATTGATGGTGCCCTTTCCCTCTG
CTCCAACGCCTACAAGCGCTTCTCCGTCGTCTCCAGGATCCTCGCCGACCACCCTGGCCCCGCCCGCCGCTTCCGCTTCC
ACCACATCCGCCTCCACAAAGACAAGAAACGGCATGCCGAGGAAGCCGCTCAGGTCGAGAACTGGTTCCATTCCCGAGCC
CTTGACAAGCTTCGGGAGCTCGACATCAGCTTTG---AGTTCTTGGGCTATGAAC------------CTCGGAAGCTTTA
CCCGCTGCCACCATCCGTGTTTCGCTTAG---CA---TCCCTCCTCGTGGCCACAATCAGCTTCTGCGAATTCCCAAATC
AGATTGTTCCTTCGATGAGTTTTCCCACCCTCAAGCAGCTCACCCTGTTTCGCGTTTTCATCTGCGAGGATGTCTTTCGT
GGGGTGCTCTCTGCCTGCAATGTCTTGGAGTCACTTGAATTGGAGGATATTTGTGATGCGAATTGCTCGCGCTTGGGCAT
TAGCTCCAAAAGTCTTAGGAGCGTG---AGCCTCTGCGCTTGTTTTTCAGGCAAAGGAGAGTTGTTCATTGAGGACGCCC
CTCTCCTTGAAAGGCTGCTACTACCTTGTCCGGGTGC---AGGC------GGTGATACTGT-CGGGTAA-----------
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>chr5B_1_TraesCS5B01G453700
GGGAGTACTAGGCGAGGATTCGAACACGTGAGCT--CCTGCTGCAAAGAGCGAGCAGATAACCACTATAACTAACAAGCA
CTTGTGCCTACTTCAAAGAAGTTGAAGAAGCTGATAACATGAGAATGTTTTCTGAAAACCCAAACTATTTTTTTAAGAAT
AGCATGTACTGTAGCAAGCATTTATTTAAAACACAAGTATTTTTTTTGAACTTTGATTTTTTTTCAAAAACATATACA-T
TTTTTGAAAACATGAACAATATTTTAAAATGCGAACT-----------------TTTTAAAAAGCAAACATTGTTTTGAA
TCTTTGATCTTTCTGAAAATGCGAACATTTTGCGGAAAAATGGGAACTTTTTTCAAAATGTGAACAAAATTTGGAACAAG
AACATAAATTTAAAGTTCCGAAC-ATATTTTTCAAAACGCGAACAAAATTATGGAATCCTGAACAGTTTTTGAAAAATTT
AACAATTTTTTAAAATTCTGAACATTTTTTAAAAATGGATATATGAAAAAGAATAAAACAGAAGAAAAGTTCCATGCATG
GATGATGGTTCAGACTGCATCATCGTCTACGTTGTATGCATAGCAGTGCTCTTAATAACCAACAAAAAAGTCAC------
---------------------TAAAAATGATGAGAGAGAAACCCGCTCACGTGGCCCTGCTGTTATTCCATCAAGCCGAT
CGAGAAACCATG----CATGTGCAAAAACCGCATACGACCGGGGCTGGATGGCGCACGCAACTCGGGCGCAATA------
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------------ATGACGTGCGCCCGCATTGGGTCGCAGCGGAGCGGAGACGAGGCGACTCAAGTCCGGTGTGTGCCCAA
TCGGCTGCCCCGCGTGGCTCCCTCCGTTTCCCGACGCAGTCACCGCCGGCCGGACGCTTCGTTTCCGGCACGAGACGCGA
TGAGAGCCCCCTCACCAGCT------------------------------------------------------------
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----------------------------------------------TAAATTCAAAGCAACACGCCGGCTCCCCCTCATC
AGCTCAAGAG----CCCTCCCACCTCCCATCCAAATTCTCCATCTCGCCAGCCACTACACATGAAGAGGAAAAAGAAGGC
GGCGGAACCCGCGGCCAAGAGGCGCCGGCC------GCGGGGCCGGGATGGCGAGCTCG------------------TCG
GCGACGGGGATCTCATCAGCAAACTCCCCGATGACATCCTCGGCACCATCATCTCCCTCCTCCCCACCAAAGACGGCGCG
CGCACGCCGGCCATCTCTCGCAGATGGCGTCCCCTCTGGCGCTCCTCGCCTCTCAACATTGATGGTGCCCTTTCCCTCTG
CTCCAACGCCTACAAGCGCTTCTCCGTCGTCTCCAGGATCCTCGCCGACCACCCTGGCCCCGCCCGCCGCTTCCGCTTCC
ACCACATCCGCCTCCACAAAGACAAGAAACGGCATGCCGAGGAAGCCGCTCAGGTCGAGAACTGGTTCCATTCCCGAGCC
CTTGACAAGCTTCGGGAGCTCGACATCAGCTTTG---AGTTCTTGGGCTATGAAC------------CTCGGAAGCTTTA
CCCGCTGCCACCATCCGTGTTTCGCTTAG---CA---TCCCTCCTCGTGGCCACAATCAGCTTCTGCGAATTCCCAAATC
AGATTGTTCCTTCGATGAGTTTTCCCACCCTCAAGCAGCTCACCCTGTTTCGCGTTTTCATCTGCGAGGATGTCTTTCGT
GGGGTGCTCTCTGCCTGCAATGTCTTGGAGTCACTTGAATTGGAGGATATTTGTGATGCGAATTGCTCGCGCTTGGGCAT
TAGCTCCAAAAGTCTTAGGAGCGTG---AGCCTCTGCGCTTGTTTTTCAGGCAAAGGAGAGTTGTTCATTGAGGACGCCC
CTCTCCTTGAAAGGCTGCTACTACCTTGTCCGGGTGC---AGGC------GGTGATACTGT-CGGGTAATTAAGGCACCT
AAACTGGAGATATTAGGCCCTTTGTCTCCATGTATCCCTGAAATTGAGATTGCTAATATAGTCTTCAAGGTACCAACA--
---GCAGAAATAATCTTGACTCTTGC------ATGC--------AGCATTGAAACATTCTTAATA-------TTTGC--T
TTATGTTCATTGTTTTATTCAGAGTTTGATCCCAACAAGCTTGAATAATATCATAGACACAACGAAGGTTTTGGCTCTCG
AGTTTTCGGCCACCGATTTGGATGCTGTTATTGATGTCTTAAGATGCTTCCCCTGCTTGGAGAAGCTTCATGTCGTTGTA
AGTATTCAT---CTTTGCTTTCTGTAAATGTCAAAATAATAATCT------------------A----TTGGACATGTCA
TCTAGTCTAATCAAAATTTACATTAACATGTTTCCTCTTTACTTTTTCAGTGGGAGAAAC---ACAACCTAAAGATAGGT
ATGAAAGATGCACGTCAATACGAC---------------AAATGCCTTGAGACCCATCTAAAAAAACGGGTGTTGAAAAA
TTACCTAGCCAGTAAGCAAGGTGTTGGATTTGCCAAGTTCTTTGTTTTGAACGCAAAATTGCTGAAGCAAATCAAATTTG
GGGTCCG-TGATAGCATCAACAAGGAACGGGTGGTCAGCAACAAGATCAACAGCAAGGAATGGTTGGCTAGTCAATACAA
GTTGCTAGAAATGGAAAATAGAGCTTCTTGAGATGTGCAATTGGAATTCGTACGAAGTCATGATGAGGAGCATTTGGATC
CCCATGATTTGTCAACTGCCGATCCCTTC-AAGTGCTATTTTGTAAATTG--------AGTTGATGATTTTTCAGAATAA
GAATGGCAATGGTTTGTCAATGGCCGATGCCATTGATGTTGCAGACAAGGTTGATTA--AACCTGA-GAATCTAATGTCT
TTTACTCAGATTGATATGCTCAAAGATTGCGTTGTC-TT---TGGCCCATCCTTAAATTGGATGTGGCTGCTCCATTTG-
---TACTATTCCTCTGTGATCCT---CATGCATTGTATGCCATG
>chr5A_4
---AGTACTAGGCGAGGACTCGAACACGTGGGCT--CCTGCTGCAAAGAGCGAGCAGATAACCACTATAACTAACAGGCG
CTTGTGCCTACTTCAAAGAAGTTGTAGAAACTGATAACATGAGAATGTTTTCTGAAAACCCAAACAAA-TTTTTAAGAAT
AGCAGGTACTGTAGCGTGCATTTATTTAAAACACAAATATTTTTT-AGAACTTTGATTTTTTTTGAAAAACATATACATT
TTTTTGAAAACATGAACAATATTTTAAAATTGGCAGGTACTGTAGCGAACTTTCTTTTAAAAAGCAAACATTGTTTTGAA
TCTTTGATCTTTCTGAAAATGCGAACATTTTGCGGAAAAATGGGAACTTTTTTTTAAATGTGAACAAAATTTGGAACAAG
GACATAAATTTAAAGTTCCAAACAATTTTTTTCAAAACGCGAACAAAATTATGGTATCCTGAACACTTTTTGAAAATTTG
AACAATTTTTGAAATTCTGAAGAA--TTTTTAAAATGGATATATGAAAAA-AATAAAACAGAAAAAAGGTTCCAAGCATG
---GATGGTTCAGACTGCATCATCGTCTAACC-GTATGCAT---AGTACTCTTAATAATCAACAAAAAGTGATTTAAAAA
AAATCAACAAAAAGTCACTAATAAAAATGAAAAGAGAGAAACCCGCTCAAAAGGCCCTGCTGTTACTCGATCAAAAGCCG
ATCGATCGAGAGAAACCATGTGCAAAACACGCATCCGACCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNATGGCGTGCGCCCACATTGGGTCGCAGCGGAGCGGAGACGAGGCGACACAAGTCCGGCGTGTGCCCAA
TCGGCTGCCCCGCGTAGCTCCCTCCGTT-CTCGACGCAGTCCCCGCCGGCCGGACGCTTCGTTTCCGGCAAAAGACGCGA
TGAGAGCCCCCTCAACTCCTAAACATTATAGTCAGCAGTCGAGGGCGTTACTGACATTTCACAACACCCACAACTCCTAA
AGCTGACAGACAACAGGGTAAACAAACAGTCAGATTCTGATTCTCAGGAATCCAGAGCCACAGCTGATTCTCAGGAATTC
ATAGCAAAGTGATTCTCAGGAATCTGTAGCCCAAACAAAGGGGGCATAAATTCAAAGCAACACGCCGGCTCCCCCTCATC
AGCTCAAGAGCCCTCCCTCCCACCTCCCATCCAACTTCTCCATCTCGCCAGCCATGGGACATGAAGAGGAAAAAGAAGGC
GGCAGAACCCGCGGCCAAGAGGCGCAGGCC------GCGGGACCGGGATGGCGAGCTCG------------------TCG
GCGACGGGGATCTCATCAGCAAACTCCCCGATGACATCCTCGGCACCATCATCTCCCTCCTCCCCACCAAAGACGGCGCG
CGCACGCAGGCCATCGCCCGCAGATGGCGTCCCCTCTGGCGCTCCTCGCCTCTCAACATTCATGGTGCCCATTCCCTCTG
CTCCAACGCCTTCAAGTGCTTCTCCGTCGTCTCCAGGATCCTCGCCGACCACCCTGGCCCCGCCCGCCGCTTCCACTTCC
ACCACATCCTCCTCCACAAAGACAAGAAACGGCATGCCGAGGAAGCCGCTCAGGTCGACAACTGGTTCCATTCCCGAGCC
CTTGACAAGCTTCAGGAGCTCGACATCAGCTTTG---AGTTCTTGGGCTATGAAC------------CTCGGAAGCTTTA
CCCGCTGCCACCATCCGTGTTCCGCTTGG---CA---TCCCTCCTCGTGGCCACATTCAGCTTCTGCGAATTCCCAAGTC
AGATTGCTCCTTCACTGAGTTTTCCCACCCTCAAGCAGCTCACCCTGTTTCGCGTTTTCATCTGCGAGGATGTCTTTTGG
CGGGTGCTCTCTGCCTGCAATGTCTTGGAGTCACTTGAATTGACGGACATTTGTGATGCGAATTGCTCGCGCTTGGGCAT
TAGCTCCAAAAGTCTTAGGAGCGTG---AGCCTCTGCGCTTGTTTTTCAGGCAAAGGAGAATTGTTCATTGAGGACGCCC
CTCTCCTTGAAAGGCTGCTATTACCTTGTCCGGGTGC---AGGC------AGTGATACTGTCCGGGTAATTAAGGCACCT
AAACTGGAGATATTAGGCCCTTTGTCTCCCTGCATCCCTGAAATTGAGATTGCTAATATATTCTTCAAGGTACCAACA--
---GCAGAAATAATCTTGACTCTTGC------ATGC--------AGCATTGTTACATTCTTAATA-------TTTGC--T
TTATGTTCATTGTTTTGTTCAGAGTTTGATCCCAACAAGCTTGAATAATACCATAGACACAATGAAGGCTTTGGCTCTCG
AGTTTTCGGCCACCGATTTGAATGCTGTTATTGATGTCTTAAGATGCTTCCCCTGCTTGGAGAAGCTTCATGTCATTGTA
AGTATTCAT---GTTTGCTATCTGTAAATGTCATAATAATAATCT------------------A----TTGGACATGTCA
TCTAGTCTAGTCAAAATTTACAT---------------------------------------------------------
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>chr5B_6
-----TACTATGCGAGGGTTCGAACACGTGAGCGGGCCTGCTGCAAAGAGCGAGCAGATAACCACTATAACAAACAGGCG
CTTGTGCCTACTTCAAAGAAGTTGTAGAAGCTGATAACATGAGAATGTTTTCTGAAAACCCAATT--TTTTTTTGAGAAT
AGGAGGTACTGTAGCGAGCATTTATTTAAAATACAATCA-TTTTT-TGAACTTTGATGTTTTTTCAAAAACATAAACATT
TTT---AAAACATGAACAATATGTTAAAATTGGCAGGTATTGTAGCGAACTTTCTTTTAAAAAGCAAACATTGTTTCGAA
TCTTTGGTCTTTCTGAAAATGCGAACATTTTGCAGAGAAATGGGAACT------------------AAATTTGGAACAAG
AACATAAATTTAAAGCCCCGAAC-ATTTTTTTCAGAACGCGAACCAAATTATGGAATCCTGAACACTTTTTGAAAATTTG
ATCATTTTTTGAAATTCTGAACA--TTTTTAAAAATGGATACATGAAAAA-AATAAAACAGAAAAAAAGTTCCAAACATG
---GATGGTTCAGACTGCATCATCGTCTAACC-GTATCAATAGCAGTGCTCCTAATAATCAACAAA-AAGTCAC------
---------------------TAATAATGAAAAGAGAGAAACCCGCTCACGAGGGCCTGCTGGTATTCCATCAAGCCGAT
CGAGAAACCATG----CATGTGCAGAACACGCATACGACCGGGGCTGGACGGCGCACGCAACTCGGCCCCAATA------
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------------ATGACGTGCGCCCGCATTGGGTCGCAGCGGAACGGAGACGAGGCGACTCAAGTCCGGTGTGTGCCCAA
TCGGCTGCCCCGCGTGGCTCCCTCCGTT-CCCGACGCAGTCACCGCCGGCCGGACGCTTCGTTTCCGGCACGAGACGCGA
TGAGAGCCCCCTCACCAGCT------------------------------------------------------------
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----------------------------------------------TAAATTCAAAGCAACACGCCGGCTCCCCCTCCTC
ATCTCAAGAG----CCCTCCCACCTCCCATCCAACTTCTCCAACTCGCCAGCCACGGGGCATGAAGAGGAAAAAGAAGGC
GGCGGAACCCGCGGCCAAGAGGCGCCGGCC------GCGGGACCGGGATGGCGAGCTCG------------------TCG
GCGACGGGGATCTCATCAGCAAACTCCCCGATGACATCCTCGGCACCATCATCTCCCTCCTCCCCACCAAAGACGGCGCG
CGCACGCAGGCCATCGCCCGCAGATGGCGTCCCCTCTGGCGCTCCTCGCCTCTCAACATTGATGATGCCTTTTTCCTCTG
CTCCAACGCCTTCAAGCGCTTCTCCGTCGTCTCCAGGATCCTCGCCGACCACCCTGGCCCCGCCCGCCGCTTCCGCTTCC
ACGACATCCGCCTCCACAAAGACAAGAAACGGCATGCCGAGGAAGCCGCTCAGGTCGAGAACTGGTTCCATTCCCGAGCC
CTTGACAAGCTTCAGGAGCTCGACATCAGCTTTG---AGTTCTTGGGCTATGAAC------------CTCGGAAGCTTTA
CCCGCTGCCACCATCCGTGTTCCGCTTAG---CA---TCCCTCCTCGTGGCCACAATCAGCTTCTGCGAATTCCCAAATC
AGATCGCTCCTTCGATGAGTTTTCCCACCCTCAAGCAGCTCACCCTGTTTCGCGTTTTCATCTGCGAGGATGTCTTTCGG
CGGGTGCTCTCTGCCTGCAATGTCTTGGAGTCACTTAAATTGGAGGATATTTGTGACGCGAATTGCTCGCGCTTGGGCAT
TAGCTCCAAAAGTCTTAGGAGCGTG---AGCCTCTGCGCTTGTTTTTCAGGCAAAGGAGAATTGTTCATTGAGGACGCCC
CTCTCCTTGAAAGGCTGCTACTACCTTGTCCGGGTGC---AGGC------GGTGATACTGTCCGGGTAATTAAGGCACCT
AAACTGGAGATATTAGGCCCTTTGTCTCCCTGTATCCCTGAAATTGAGATTGCTAATATAGTCTTCAAGGTACCAACA--
---GCAGAAATAATCTTGACTTCTGC------ATGC--------AGCATTGTTACATTCTTAATA-------TTTGC--T
TTATGTTCATTGTTTTGTTCAGAGTTTGATCCCAACAAGCTTGAATAATACCATAGACACAATGAAGGTTTTGGCTCTCA
AGTTTTCGGCCACCGATTTGAATGCTGTTATTGATGTCTTAAGATGCTTCCCCTGCTTGGAGAAGCTTCATGTCATTGTA
AGTATTCAT---CTTTGCTTTCTGTAAATGTCAAAATAATAATCT------------------A----TTGGACATGTCA
GCTAGTCTAATCAAAATTTACATTAACATGTTTCCTCTTTACTTTTTCAGTGGGAGAAAC---ACAGCTTACAGATAGGT
ATGAAAGATGCACGTCAATACGACCCACTAGATCCTGTCAAATGCCTTGAGACCCATCTAAAAAAACTGGTGTTGAAAAA
TTACCTAGCCAGTAAGCAAGGTGTTGGATTTGCCAAGTTCTTTGTTTTGAACACAAAATTGCTGAAGCAAATCAAATTTG
GGGTCCG-TGATAGCATCAACAAGGAACGGGTGGTCAGCAACAAGATCAACAGCAAGGAATGGTTGGCTAATCAATACAG
G-----------------------TTCTTGAGATGTGCAATTGGAATTCGTACGAAGTTATAATGAGGAGTGTTTGGATC
CCCATGATTTGTCAACTGCTGATCCCTTC-AAGTGTTA-TTTGTAAATTG--------AGTTGATGATTTTTCAGAATAA
GCATGGCAATGGTTTGTCAATG-CTGATTCCATTGATGTTGCGGACAAGGTTGATTA--TACCTGAGGAACCTAATGTCT
TTTACTT-GATTGATATGCTTGAAGATTGAGTTGTC-TT---TGGCCCATCCTTAAGTTGGATGTGGCTGCTCCATTTG-
---TACTA------------------------------------
>chr1D_960
CCACCTC-------------------------------------------------------------------------
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-------------------------CCCGTCCAAATTCTCCGTCTCGCCAGCCACGCGACATGAAGAAGAAAAAGAAGGC
GGTGGAACCAGCGGCCAAGAGTAGCAGGCCACGGAAGCGGAGCCGCGACGGTGAGCTCGA------CGGCGATCTCATCA
GCCACGGTGATCTCATCAGCAAACTCCCCGATGACATCCTCTGCACAATCATCTCCCTCCTGCCCACCAAAGACGGCGCA
CGCACCCAGGTTATCGCTCGCCGATGGCGTCCCCTCTGGCGCTCAGCGCCCCTCAACCTCGACGCCTCCAAACACCTCTG
CTCCAACGACTTCAAGCGCTTCTCCCTCATCTCCAAGATCCTCTCCGACCACCCTGGCCCCGCCCGCCGCTTCGTCATCT
ATTCCATCCGCCTCCACATAGCGGAAAAGAGGTATGCCGAGGAAGCCGCTCAGATCGAGAACTGGTTCGTCTTCCCTGCC
CTTGACAACCTTCAGGAGCTCGACATCAACTTTAGGCAGCCGTTTCTCTCTGGAC------------GTGAGAACCGTTA
CCCGCTGCCACCATCCGTGTTCCGCTTAG---CACCAACCCTCCTTGTGGCAAAAATTGGCCTCTGCAATTTCCCAAATG
AGATTGTCCATTCGCTGAGTTTTCCCTTGCTCAAGCAGCTCACCTTATCTCGCGTCTCCATTTCCGAGGATGACTTCTCG
GGGGTGCTCTCTGGCTGCCGTGTGTTGGGGTCGCTTAAATTGCAGGGTATTCGTGATGTGAATT------GTCTCCGCAT
TAGCTCGACAACTCTCAGGATCATCATAATCGCCTACTCTTTGTTTGAGAGGAAAGGAGAATTGTTCATTGAGGACGCCC
CTTGCCTTGAAAGGCTGCTACTAGTTAATCCGGGCTC---AGGC------GGTGAGACTATCCGGGTAATTAAGGCACCT
AAAATGGAGACATTGGGCCTTTTGTCTGCCCGCATCTCAGAAATTGAGATTGCTAATATAGTCTTCCAGGTAACC-----
---GCAGAATCAGTCTCTAGACTTTT------AGCT--------GACATTGTTAGTTCG--------GGTGCTTAGCAAT
CTTTATTGTTTTCTTTATTTAGAGATTGATCCCATCCAGTTCGGAAGTCCCAATATGCACTGTAAAGGTTTTGGCTCTCC
ATTTCTCTAGCCCTGATTTGGATGCAGTTCTTGACATCCTTAGATGCTTCCCGTGCTTGGAAAAGCTCTATGTCTTTGTG
AGTATTCAT---TTTTCTTTTCTTTGTATATCAAAATAAATATTCAATT-------------------------------
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>chr1B_960
CCACCTC-------------------------------------------------------------------------
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-------------------------CCCATCCAAATTCTCCATCTCGCCAGCCACGCGACATGAAGAAGAAAAAGAAGGC
GGTGGAACCGGCGGCCAAGAGTCGCGGGCCACGGAAGCGGAGCCGCGACGATGAGCTCGTCAGCGGCGGCGATCTCATCA
CCCACGGTGATCTCATCAGCAAACTCCCCGATGACATCCTCTGCACAATCATCTCCCTCCTGCCCACCAAAGACGGCGCA
CGCACCCAGGCTGTCGCTCGCCGATGGCGTCCCCTCTGGCGCTCAGCGCCCCTCAACCTCGACGCCTCCAAACACCTCTG
TTCCAACGACTTCAAGCGCTTCTCCCTCATCTCCAAGATCCTCTCCGACCACCCTGGCCCCGCCCGCCGCTTCGTCGTCT
ATTCCATCCGCCTCCACATAGCGGAAAAGAGGTATGCCGAGGAAGCCGCTCAGATCGAGAACTGGTTCGTCTTCCCTGCC
CTTGACAACCTTCAGGAGCTCGACATCAACTTTAGGCAGCCCTTTCTCTCTGGAC------------GTGAGAACCGTTT
CCCGCTGCCACCATCCGCGTTCCGCTTAG---CACCAACCCTCCTTGTGGCAAAAATTGGCCTCTGCAAATTCCCAAATG
ATATTGCCCATTCGCTGAGTTTTCCCTTGCTCAAGCAGCTCACCTTATTCCGCGTCTCCATTTCCGAGGATGCCTTCTCT
GGGGTGCTCTCTGGTTGCCGTGTGTTGGAGTCACTTAAATTGCAGGGTATTCCTGATGTGAATT------GTCTCCGCAT
TAGCTCGACAACTCTCAGGATCATC---ATCGTCTGCTCTTTGTTTGAGAGGAAAGGAGAATTGTTCATTGAGGACGCCC
CTTGCCTTGAAAGGCTGCTGCTAA---ATCCGGGCAC---AGGCCGTGACCGTGAGACTATCCGGGTAATTAAGGCACCT
AAATTGGAGATATTGGGCCTTTTATCTGCCCGAATCCCAGAAATTGAGATTGATAATATAGTCTTCCAGGTAACAGCAGA
AATGCAGAATCAGTCTCTAGACTTTT------AGCT--------GGCATTGTTAGTTCG--------GGTGCTTATTAAT
CTCCATTGTTTTCTTCATTTAGCGATTGATCCCATCCAGTTTGAAAGTCACAATATGCACTGTAAAGGTTTTGGCTCTCC
ATTTCTTTAGCCCTGATTTGGATGCAGTTCTTGACATCCTTAGATGCTTCCCCTGCTTGGAAAAGCTCTATGTCTTTGTG
AGTATTCAT---TTTTCTTTCCTTTGTATATCAAAATGAATATTCAATT-------------------------------
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>chr1D_1068
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-----------------------------------------------------AGCTTG------------------TCA
GCGACGGGGATCTCATCAGCAAACTCTCCGATGACATCCTCGGCACCATCATCTCCCTCCTCCCCACCAAAGACGGCACC
CGCACGCAGGCCATCGCTCGCAGATGGCGCCCTCTCTGGCGCTCAGCGCCTCTCAACCTCCACGCCTCCTACCACCTCTG
CTCCAAACAGTTCAAGCACCTCTCCGTCGTCTCCAGGATCCTCTCCGACCAGTCTGGACCCGCCCGCCGTTTCGTCTTCC
GCCTCGTCCGCCTCCACAAGGCGAAAAAAAGGCACGCCGAGGAAGCCGCTCAGATCGAGAACTGGTTCCACTCCCGAGCC
CTCAGAAACCTTAAGGAGCTCGATATCAGCTTCG---ACCTCTTGGACTATGTAC------------ACGAGAAGCTTTA
TCCGCTGCCCCC--------TCCGCTTAGCACCA---ACTCTCCTCGTGGCCATAATCGGCTTCTGCGAATTCCCCAAGG
AGATCACTCATTCGCTTAGTTTTCCGTTGCTCAAGCAGCTCATCCTGCGGCGTGTTTCCATCTGCCAGGATGTCTTCCAT
GGGGTGCTCTCTGCCTGCGGTCTGTTGGAGTCACTCGAATTGAAGGAAATTCGTGATACGAATT------GCTTGCGCAT
TAGCTCGGCAACTCTTAGGAGTGTG---AGCCTCTGCGCTTGTTTTGCAGCCAAAGGAGAATTGTTCATTGAAG-CGCCC
CTCTCCTTGAAAGGCTGCTACTACCTTGTCCGCGCGA---AGGG------CGTGAGACTATTCGGATAATCAAGGCACCT
AAACTGGAGATACTGGGCCTTTTGTCTCCCCGCATCTCCGAAACTGAGATTGCTAATGTAGTCTTCCAGGTAGCAACAAC
AT------AATCATCTTAACTCTTAC------ATGC--------AGCATCATTACATTTTAATATTCATTATTTTGT--T
TTATGCCCATTCTTTTGTTCAGAGTTTAACCCCAACAAGCTTGAATAATACGATAGCCACAGTGAAGGTTCTGGCTCTCG
AGTTTCCGGTCCCTGATTTGAATGCTGTTATTCACGTCTTAAGATGCTTCCCGTGCTTGGAAAAGCTTCATGTCATTGTG
AGTATACTCATCCTTGCTTTCTTTTAAATGTCAAAATAAATATTTGATTCTGCAGAGACAATAA----TTGGATATATAA
TCTAGTCTAGTTAATATTTACTTTAACATGCCTCTTCTTTACTTTTCCAGTGGGAGAAAT---AC---TTGAAGATAGGT
ACGAAAAATGCACGTCAGTATGACCCACTAGATCCAGTCAAAGGCCTTGATACCCATCTAAAAAAACTGGTATTGAAAAA
TTATGAGGGCAGTGAGCAAGATGTTGGCTTTGCCAAGTTCTTTATTTTGAACGCAAAAGTGCTGAAGAAACTCAAATTTG
GAGTCAG-TCATAGGATCAACAA---------------------------------------------------------
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>chr1A_1068
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-----------------------------------------------------AGCTTG------------------TCA
GCGACGGGGATCTCATCAGCAAACTCCCCGATGACATCCTCGGCACCATCATCTCCCTCCTCCCCACCAAAGACGGCGCC
CGCACGCAGGCCATCGCTCGCAGATGGCGCCCTCTCTGGCGCTCAGCGCCTCTCAACCTCCACGCCTCCTACCACCTCTG
CTCCAAACAGTTCAAGCGCCTCTCCGTCGTCTCCAGGATCCTCTCCGACCACCCTGGACCTGCCCGCCGTTTCGTCTTCC
GCCTCGTCCGCCTCCACAAAGCGAAAAAAAGGCACGCCGAGGAAGCCGCTCAGATCGAGAACTGGTTCCACTCCCGAGCC
CTCAGAAACCTTAAGGAGCTCGATATCAGCTTCG---ACCTCTTGGACTATGTAC------------ATGAGAAGCTTTA
TCCGCTGCCCTCATCAGTGTTCTGCTTAGCACCA---ACTCTCCTCGTGGCCCTAATCAGCTTCTGCGAATTCCCCAAGG
AGATCACTCATTCACTTAGTTTTCCGTTGCTCAAGCAGCTCATCCTGCGGCGCGTATCCATCTGCCAGGATGTCTTCCAT
GGGGTGCTCTCTGCCTGCCATCTGTTGGAGTCGCTTGAATTGAAGGAAATTCGTGATACTAATT------GCTTGCGCAT
TAGCTCGGCAACTCTTAGGAGTGTG---AGCCTCTGCGCTTGTTTTGCAGCCAAAGGAGAATTGTTCATTGAAGACGCCC
CTCTCCTTGAAAGGCTGCTACTACCTTGTCCGCGCGA---AGGG------GGTGAGATTATTCGGATAATCCAGGCACCT
AAACTGGAGATACTGGGCCTTTTGTCTCCCCGCATCTCCAAAATTGAGATTGCTAATGTAGTCTTCCAGGTAGCAACAAC
AT------ACTCATCTTAACTCTTACATACAGATGC--------AGCATCATTACATTTTTGTATTCATTCTTTTGT--T
TCATGCCCATTCTTTTGTTCAGAGTTTAACCCCAACAAGCTTGAATAATACGATAGCCACAGTGAAGGTTTTGGCTCTCG
AGTTTCCAGTCCCTGATTTGAATGCTGTTATTGACGTCTTAAGATGCTTCCCGTGCTTGGAAAAGCTTCATGTCATTGTG
AGTATACTCATCCTTGCTTTCTTTTAAATGTCAAAATAAATATTTGATTCTGCAGAGACAATAATCTGTTGGATATATAA
TCAAGTCTAGTTAAGACTTACTTTAACATGCCTCTTCTTTACTTTTCCAGTGGGAGAAAT---AC---TTGAAGATAGGT
ACGAAAAATGCACGTCAGTATGACCCATTAGATCCAGTCAAAGGCCTTGATACCCATCTAAAAAAACTGGTATTGAAAAA
TTACGAGGGCAGTGAGCAAGATGTTGGCTTTGCCAAGTTCTTTATTTTGAACGCAAAAGTGCTGAAGGAACTCAAATTTG
GAGTAAG-TCATAGGATCAACAAACAATGGGTGGCTG---------------------------------ATCAATACAG
GCTGCTAGAAATGGAAAATAGAGCTTCTCAAGGCGCTCAATTGGAATTCATACAAAATGATGATGTGTCGTCTTTGGATG
CCCATGATTTGTCAACTGCCGATCCCTTTTAACTGTTATTTTGTAAATGAAGATGAATAGATGACGATATTTCAGAATAA
GCATGCCAATGGTTTATCTGTGACT-------------TTGCAGACAAGGTTGATTATATACCTGAGGAATCTAATGTCT
TTTACTTAGGTTGAT--GCTCGAAGATCGCACTGTATTT---TGTCTGGTCCTTAAATAGGACGTGCCGCTACATTTATG
GTCTACTATTCCTTTGTGATTCCGAACATGCATTGTATGTCATG
>chr1B_1085
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--------GATCTCATCAGCAAACTCCCCGATGACATCCTCGGCACCATCATCTCCCTCCTCCCCACCAAAGACGGCGCC
CGCACGCAGGCCATCGCTCGCAGATGGCGCCCTCTCTGGCGCTTAGCGCCTCTCAACCTCCACGCCTCCTACCACCTCTG
CTCCAAACAGTTCAAGAGCCTCTCCGTCGTCTCCAGGATCCTCTCCGACCACCCTGGACCTGCCCGCCGTTTCGTCTTCA
GCCTCGTCCGCCTCCACAAAGCGAAAAAAAGGCACGCCGAGGAATCCGCTCAGATCGAGAACTGGTTCCACTCCCGAGCC
CTCAGAAACCTTAAGGAGCTCGACATCAGCTTCG---ACCTCTTGGACTATGTAC------------ATGAGAAGCTTTA
TCCGCTGCCCTCATCAGTGTTCTGCTTAGCACCA---ACTCTCCTCGTGGCCACAATCGGCTTCTGCAAATTCCCAAAGG
AGATCACTCATTCGCTTAGTTTTCCGTTGCTCAAGCAGCTCAACCTGCGGCGCGTTTCCATCTGCCAGGATGTCTTCCAT
GGGGTGCTCTCTGCCTGCCATCTGTTGGAGTCGCTTGAATTGCAGGAAATTTGTGATACGAATT------GCTTGCGCAT
TAGCTCGGCAACTCTTAGGAGTGTG---AGCCTCTGCGCTTGTTTTGCAGCCAAAGGAGAATTGTTCATTGAAGACGCAC
CTCTCCTTGAAAGGCTGCTACTACCTTGTCCGCGCGA---AGGG------CGTGAGACTATTCGGATAATCAAGGCACCT
AAACTGGAGATACTGGGCCTTTTGTCTCCCCGCATCTCCCAAACTGAGATTGCTAATGTAGTCTTCCAGGTAGCAACACC
AT------AATCATCTTAACTCTTAC------ATGC--------AGCATCATTACATTTTAATATTCATTCTTTTGT--T
TTATGCTCATTCTTTTGTTCAGAG------------------GAATAATACGATAGCCACAGTGAAGGTTCTGGCTCTCG
AGTTCCCGGTCCCTGATTTGAATGCTGTTATTGACGTCTTAAGATGCTTCCCGTGCTTGGAAAAGCTTCATGTCATTGTG
AGTATACTCATCCTTGCTTTCTTTCAAATGTCAAAATAAATATTTGATTTGGCAGAGACAATAATCTGTTGGATATATAA
TCTAGTCTAGTTAAGATTTACTTTAACATGCCTCTTCTTTACTTTTCCAGTGGGAGAAAT---AC---TTGAACATAGGT
ATGAAAAATGCACGTCAGTATGACCCACTAGATCCGGTCAAAGGCCTTGATACCCATCTAAAAAAACTGGTATTGAAAAA
TTATGAGGGCAGTGAGCAAGATGTTGGCTTTGCCAAGTTCTTTATTTTGAACGCAAAAGTGCTCAAGGAACTCAAATTTG
GAGTCAG-TCATAGGATCAACAAACAATGGGTGGCTG---------------------------------ATCAATACAG
GCTGCTAGAAATGGAAAATAGAGCTTCTCGGGGCGCTCAATTGGAATTCATACAAAATGATTATGGGTCGTCTTTGGATG
CCCATGATTTGTCAACTGCCGATCCCTTTTAACTGTTATTTGGTAAATGAAGATGAATAGATGACGATCTTTCAGAATAA
GCATGTCAATGGTTTATCTGTGACTCATCCCATTGACTTTGCAGACAAGGTTGATTGTATACCTAAGGAATCTAATGTCT
TTTACTTAGGTTGAT--GCTCGAAGATCGCACTGTATTT---TGTCTGGTCCTTAAATTGGATGTGCCGCTACATTTATG
GTCTACTATTCCTTTGTGATTCCGAACATGCATTGGATGTCATG
>chr1B_1085
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--------GATCTCATCAGCAAACTTCCCGATGACGTCCTCGGCACCATCATCTCCCTCCTTCCCACCAAGGACGGCGCC
CGTACGCAGGCCATCGCCCGAAGATGGCGTCCCCTCTGGCGCTCCTCGCCTCTCAACCTCGACGCCTCCTACCACCTTCG
CCGCGACGAGTTCAAGCGCCTCTCCTTAGTCTCTAGGATTCTGTCAGACCACCCTGGCCCGGCCCGCTGCTTCGCTTTCC
GCTTCATCCGCCTCCACAAAGCCAAAAAAAGGTTTGCCGAGGATGCCGCTCAGATCAATAGTTGGTTCCACTCCCGAAGC
CTCGACAACCTCCAGGAGCTCGAAATCAGCTTCAGTCTACTTGAATATGGATATGGGCAGTCTGAGAAGGAGAAGCGCTA
TCCGCTGCCACCGTCGGTGCTGCGCTTAG---CATCAACGCTCCACTTGGCCAGGATTGGCTCCTGTGATTTCCCAAAGG
AGATCGCACCTTCACTGAATTTTCCCCTCCTCAGGCAGCTCCACCTATGGCGCGTTTCCATCTCCGAGGATGTCTTCTCT
GGGGTGCTGTCTGGCTGCCATGTCTTGGCGAACTTATATCTGTCGGAGATTCGTGAGGTAGGTA------GCCTCCGCAT
TTGCTCGCCAACTCTCAGGATCATC---GTCATAACTTGTTTGTTTGAAGGCAAAGGAGAATTGGTCATTATGGAGGCCC
CTCGCCTTGAAAGGTTGCTGTTAC---GTCCGCCAGTCTTAGGT------AGTGAGATTATCCGGGTTGTTAAGGCACCT
AAACTGGAGATGTTGGGCCTTTTGTCTCCCTGCATCTCAGAAATAGAAATTGTTAATATTATCTTTAAGGTACA------
---GCTGCATCCGTCTCTAGGCTCTT------AGCCTCTTACATGGAATCCTCACTTCG--------ATTTCTTTTT--T
CAAACTCCGTTGTTTTCTTCAGGGATTGATCTCATCCAGCTCGGAAAGCTCAATACGCACCGTAAAGGTTTTGGCTCTCA
ATTTTTCTAGCCCTGCTTTGGATGCAATTCTTGACATCCTTAGATGCTTCCCCTGCTTGCAAAAGCTCTATGTCATTGTG
AGTATTCAT---CTTTCTTTGCTATAAATCTCA-----------------------------------------------
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>chr5A_2215
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-------------------------ACATGTTTCCTTTTTACTTTTTTAGTGGAAGAAACACAAC---TTAAAGATAGGT
ATGAAAGATGCACGTCAATATGACTCACAAGATCCAGTCAAATGCCTTGAGACGCATCTAAAAAAACTGGTGTTGAAAAA
TTACCTAGCCAGTAAGCAAGGTGTTGGATTTGCCAAGTTCTTTGTTTTGAACGCAAAGTTGCTGAAGGAAATCAAATTTG
GGGTCCTATAATAGCATCAACAAGGAAGGGGTGGTCAGCAACAAGATCAACAGCAAGTTATGGTTGGCTAATCAATACAG
GCTGCTAGAAATGGAAAATAGAGCTTCTTGAGATGTGCAATTGGAATTCGTATGAAGTCATAATGAGGAGCAGCTGGATC
CCCATGATTTGTCAACTGCCGATCCCTTC-AAGTGCTATTTTGTAAATTG--------AGTTGATGATTTTCCAGAATAA
GCATGGCAATGGTTTGTCAATGGCCGATCCCATTGATGTTGCAGACAAGGTTGATTA--AACCTGA-GAATCTAATGTCT
TTTACTCAGATTGATATGCTCGAAGATTGCATAGTTTGTCAATGGCCCATCCTTAAATCGGATGTGGCTGCTCCATTCA-
---TACTATTCCTCTGTGATCCT---CATGCATAGT--------
>SNPs
SSS-------------------------------------------------------------------------S--S
------------------------S----------------------------------------S--------------
----S----------S--------------------S--------S----------------------------------
------------------------------SS-S-SS-------------------------------------------
-----------------------------------------------------SS-------------------------
--------------------------S--------------------------------------S----------S--S
----------S---S-SSSS-SS-S-------------------------S------------S----------S-----
SSS--------------------------SSSS-------------------------S---------------------
------------------------------SS-------------------S----------------------------
---------------------------SS--------------------S----------------S-S-----------
--------------------------------------------------------------------------------
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----------------------------S---------------------------------------------------
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-------------------------------------------------------SSS----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-------S----------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
---------------------------------------------------SS---------------------------
--------------------------------------------------S-----------S-----------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
------------------------------------------------------------------S-S-----------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S--------S
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S--------------------------S---------------------------------------------------
---------------------S----------------------------------------------------------
---------------------------------------S----
>forward_692
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--------------------------------AGAGAGAAACCCGCTCACGT----------------------------
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>reverse_2381
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------------------------------------------------------------GTTGTTCATTGAGGACGCCC
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--------------------------------------------
>forward_1578
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---------------------------------------CCATCTCGCCAGCCACTAC----------------------
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>reverse_2703
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--------------------------------------------------------------CGAAGGTTTTGGCTCTCG
AG------------------------------------------------------------------------------
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--------------------------------------------
